JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACSL1_chr4_184750595_184830968	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0246	CHS	EAS	ACSL1	chr4	184750595	184830968
ACSL1_chr4_184750595_184830968	HG00609	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0273	CHS	EAS	ACSL1	chr4	184750595	184830968
ACSL4_chrX_109636335_109738257	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	CHS	EAS	ACSL4	chrX	109636335	109738257
ACSL5_chr10_112369116_112433376	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	CHS	EAS	ACSL5	chr10	112369116	112433376
ACSL5_chr10_112369116_112433376	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0250	CHS	EAS	ACSL5	chr10	112369116	112433376
ACSL6_chr5_131944973_132016658	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	CHS	EAS	ACSL6	chr5	131944973	132016658
ACSL6_chr5_131944973_132016658	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	CHS	EAS	ACSL6	chr5	131944973	132016658
ACSM1_chr16_20618235_20702680	HG00609	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0314	CHS	EAS	ACSM1	chr16	20618235	20702680
ACSM1_chr16_20618235_20702680	HG00609	hp2	a0010	a0010c0017	a0010c0017t0001	a0010c0017t0001g0071	CHS	EAS	ACSM1	chr16	20618235	20702680
ACSM2A_chr16_20446521_20492669	HG00609	hp1	a0008	a0008c0008	a0008c0008t0001	a0008c0008t0001g0152	CHS	EAS	ACSM2A	chr16	20446521	20492669
ACSM2A_chr16_20446521_20492669	HG00609	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0219	CHS	EAS	ACSM2A	chr16	20446521	20492669
ACSM2B_chr16_20531226_20581367	HG00609	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0006	CHS	EAS	ACSM2B	chr16	20531226	20581367
ACSM2B_chr16_20531226_20581367	HG00609	hp2	a0001	a0001c0006	a0001c0006t0003	a0001c0006t0003g0314	CHS	EAS	ACSM2B	chr16	20531226	20581367
ACSM3_chr16_20759014_20802581	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	CHS	EAS	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	HG00609	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0097	CHS	EAS	ACSM3	chr16	20759014	20802581
ACSM4_chr12_7299072_7333719	HG00609	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	CHS	EAS	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	CHS	EAS	ACSM4	chr12	7299072	7333719
ACSM5_chr16_20404534_20446336	HG00609	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0032	CHS	EAS	ACSM5	chr16	20404534	20446336
ACSM5_chr16_20404534_20446336	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0290	CHS	EAS	ACSM5	chr16	20404534	20446336
ACSM6_chr10_95189238_95233929	HG00609	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0040	CHS	EAS	ACSM6	chr10	95189238	95233929
ACSM6_chr10_95189238_95233929	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0092	CHS	EAS	ACSM6	chr10	95189238	95233929
ACSS1_chr20_25001237_25063139	HG00609	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0053	CHS	EAS	ACSS1	chr20	25001237	25063139
ACSS1_chr20_25001237_25063139	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	CHS	EAS	ACSS1	chr20	25001237	25063139
ACSS2_chr20_34871612_34932959	HG00609	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0038	CHS	EAS	ACSS2	chr20	34871612	34932959
ACSS2_chr20_34871612_34932959	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	CHS	EAS	ACSS2	chr20	34871612	34932959
ACSS3_chr12_81073079_81266210	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	CHS	EAS	ACSS3	chr12	81073079	81266210
ACSS3_chr12_81073079_81266210	HG00609	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0102	CHS	EAS	ACSS3	chr12	81073079	81266210
ACTA1_chr1_229426245_229439094	HG00609	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	CHS	EAS	ACTA1	chr1	229426245	229439094
ACTA1_chr1_229426245_229439094	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	CHS	EAS	ACTA1	chr1	229426245	229439094
ACTA2_chr10_88930074_88957773	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	ACTA2	chr10	88930074	88957773
ACTA2_chr10_88930074_88957773	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	ACTA2	chr10	88930074	88957773
ACTBL2_chr5_57475018_57487811	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ACTBL2	chr5	57475018	57487811
ACTBL2_chr5_57475018_57487811	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ACTBL2	chr5	57475018	57487811
ACTC1_chr15_34785230_34800549	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	ACTC1	chr15	34785230	34800549
ACTC1_chr15_34785230_34800549	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CHS	EAS	ACTC1	chr15	34785230	34800549
ACTG1_chr17_81504971_81517799	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACTG1	chr17	81504971	81517799
ACTG1_chr17_81504971_81517799	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACTG1	chr17	81504971	81517799
ACTG2_chr2_73888008_73924865	HG00609	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0117	CHS	EAS	ACTG2	chr2	73888008	73924865
ACTG2_chr2_73888008_73924865	HG00609	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0233	CHS	EAS	ACTG2	chr2	73888008	73924865
ACTL6A_chr3_179557926_179593407	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	CHS	EAS	ACTL6A	chr3	179557926	179593407
ACTL6A_chr3_179557926_179593407	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACTL6A	chr3	179557926	179593407
ACTL6B_chr7_100638097_100661448	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	CHS	EAS	ACTL6B	chr7	100638097	100661448
ACTL6B_chr7_100638097_100661448	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	ACTL6B	chr7	100638097	100661448
ACTL7A_chr9_108857266_108868756	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ACTL7A	chr9	108857266	108868756
ACTL7A_chr9_108857266_108868756	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ACTL7A	chr9	108857266	108868756
ACTL7B_chr9_108849588_108860986	HG00609	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0000	CHS	EAS	ACTL7B	chr9	108849588	108860986
ACTL7B_chr9_108849588_108860986	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ACTL7B	chr9	108849588	108860986
ACTL8_chr1_17750333_17832063	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0297	CHS	EAS	ACTL8	chr1	17750333	17832063
ACTL8_chr1_17750333_17832063	HG00609	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0132	CHS	EAS	ACTL8	chr1	17750333	17832063
ACTMAP_chr19_40735861_40755477	HG00609	hp1	a0001	a0001c0003	a0001c0003t0010	a0001c0003t0010g0013	CHS	EAS	ACTMAP	chr19	40735861	40755477