JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACTMAP_chr19_40735861_40755477	HG00609	hp2	a0001	a0001c0001	a0001c0001t0033	a0001c0001t0033g0105	CHS	EAS	ACTMAP	chr19	40735861	40755477
ACTN2_chr1_236681499_236769631	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	CHS	EAS	ACTN2	chr1	236681499	236769631
ACTN2_chr1_236681499_236769631	HG00609	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0111	CHS	EAS	ACTN2	chr1	236681499	236769631
ACTN3_chr11_66541903_66568334	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	CHS	EAS	ACTN3	chr11	66541903	66568334
ACTN3_chr11_66541903_66568334	HG00609	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0018	CHS	EAS	ACTN3	chr11	66541903	66568334
ACTR1B_chr2_97650939_97669044	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	CHS	EAS	ACTR1B	chr2	97650939	97669044
ACTR1B_chr2_97650939_97669044	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACTR1B	chr2	97650939	97669044
ACTR2_chr2_65222831_65276253	HG00609	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0076	CHS	EAS	ACTR2	chr2	65222831	65276253
ACTR2_chr2_65222831_65276253	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACTR2	chr2	65222831	65276253
ACTR3B_chr7_152754752_152860378	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0233	CHS	EAS	ACTR3B	chr7	152754752	152860378
ACTR3B_chr7_152754752_152860378	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0048	CHS	EAS	ACTR3B	chr7	152754752	152860378
ACTR3C_chr7_150242212_150328545	HG00609	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0242	CHS	EAS	ACTR3C	chr7	150242212	150328545
ACTR3C_chr7_150242212_150328545	HG00609	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0066	CHS	EAS	ACTR3C	chr7	150242212	150328545
ACTR3_chr2_113885089_113967596	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	CHS	EAS	ACTR3	chr2	113885089	113967596
ACTR3_chr2_113885089_113967596	HG00609	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0332	CHS	EAS	ACTR3	chr2	113885089	113967596
ACTR5_chr20_38743460_38777520	HG00609	hp1	a0002	a0002c0003	a0002c0003t0002	a0002c0003t0002g0014	CHS	EAS	ACTR5	chr20	38743460	38777520
ACTR5_chr20_38743460_38777520	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CHS	EAS	ACTR5	chr20	38743460	38777520
ACTR8_chr3_53862066_53887152	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACTR8	chr3	53862066	53887152
ACTR8_chr3_53862066_53887152	HG00609	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0089	CHS	EAS	ACTR8	chr3	53862066	53887152
ACTRT1_chrX_128045962_128057403	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ACTRT1	chrX	128045962	128057403
ACTRT2_chr1_3016467_3027903	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ACTRT2	chr1	3016467	3027903
ACTRT2_chr1_3016467_3027903	HG00609	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0000	CHS	EAS	ACTRT2	chr1	3016467	3027903
ACVR1B_chr12_51946699_52002078	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	CHS	EAS	ACVR1B	chr12	51946699	52002078
ACVR1B_chr12_51946699_52002078	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0248	CHS	EAS	ACVR1B	chr12	51946699	52002078
ACVR1C_chr2_157521767_157633864	HG00609	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0117	CHS	EAS	ACVR1C	chr2	157521767	157633864
ACVR1C_chr2_157521767_157633864	HG00609	hp2	a0001	a0001c0001	a0001c0001t0032	a0001c0001t0032g0169	CHS	EAS	ACVR1C	chr2	157521767	157633864
ACVR2A_chr2_147840029_147935822	HG00609	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0017	CHS	EAS	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0201	CHS	EAS	ACVR2A	chr2	147840029	147935822
ACVR2B_chr3_38448890_38498142	HG00609	hp1	a0001	a0001c0003	a0001c0003t0012	a0001c0003t0012g0160	CHS	EAS	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	HG00609	hp2	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0084	CHS	EAS	ACVR2B	chr3	38448890	38498142
ACY1_chr3_51978535_51994197	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACY1	chr3	51978535	51994197
ACY3_chr11_67637555_67655730	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	CHS	EAS	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CHS	EAS	ACY3	chr11	67637555	67655730
ADA2_chr22_17173790_17224435	HG00609	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0380	CHS	EAS	ADA2	chr22	17173790	17224435
ADA2_chr22_17173790_17224435	HG00609	hp2	a0001	a0001c0001	a0001c0001t0040	a0001c0001t0040g0321	CHS	EAS	ADA2	chr22	17173790	17224435
ADAD1_chr4_122374011_122434784	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	CHS	EAS	ADAD1	chr4	122374011	122434784
ADAD1_chr4_122374011_122434784	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0156	CHS	EAS	ADAD1	chr4	122374011	122434784
ADAD2_chr16_84186157_84202166	HG00609	hp1	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0001	CHS	EAS	ADAD2	chr16	84186157	84202166
ADAD2_chr16_84186157_84202166	HG00609	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0010	CHS	EAS	ADAD2	chr16	84186157	84202166
ADAL_chr15_43325672_43359569	HG00609	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0029	CHS	EAS	ADAL	chr15	43325672	43359569
ADAL_chr15_43325672_43359569	HG00609	hp2	a0001	a0001c0003	a0001c0003t0005	a0001c0003t0005g0003	CHS	EAS	ADAL	chr15	43325672	43359569
ADAM10_chr15_58583809_58754707	HG00609	hp1	a0001	a0001c0001	a0001c0001t0073	a0001c0001t0073g0009	CHS	EAS	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	CHS	EAS	ADAM10	chr15	58583809	58754707
ADAM11_chr17_44753988_44786846	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	CHS	EAS	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	HG00609	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0169	CHS	EAS	ADAM11	chr17	44753988	44786846
ADAM15_chr1_155046316_155067775	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0055	CHS	EAS	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ADAM15	chr1	155046316	155067775
ADAM18_chr8_39579568_39735065	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0298	CHS	EAS	ADAM18	chr8	39579568	39735065
ADAM18_chr8_39579568_39735065	HG00609	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0092	CHS	EAS	ADAM18	chr8	39579568	39735065