JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
AATF_chr17_36943954_37061871	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0184	PUR	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0149	PUR	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG00639	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0004	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG00639	hp2	a0007	a0007c0031	a0007c0031t0001	a0007c0031t0001g0261	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0153	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0301	PUR	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG00639	hp1	a0006	a0006c0007	a0006c0007t0004	a0006c0007t0004g0188	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0079	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	HG00639	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG00639	hp1	a0001	a0001c0002	a0001c0002t0011	a0001c0002t0011g0101	PUR	AMR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG00639	hp2	a0001	a0001c0026	a0001c0026t0002	a0001c0026t0002g0208	PUR	AMR	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	HG00639	hp1	a0051	a0051c0110	a0051c0110t0001	a0051c0110t0001g0301	PUR	AMR	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0139	PUR	AMR	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0002	PUR	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG00639	hp2	a0004	a0004c0005	a0004c0005t0003	a0004c0005t0003g0200	PUR	AMR	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	HG00639	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0233	PUR	AMR	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	HG00639	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0268	PUR	AMR	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0243	PUR	AMR	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	HG00639	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0184	PUR	AMR	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	HG00639	hp1	a0002	a0002c0002	a0002c0002t0007	a0002c0002t0007g0133	PUR	AMR	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	HG00639	hp2	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0035	PUR	AMR	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	PUR	AMR	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0255	PUR	AMR	ABCB10	chr1	229511582	229563707
ABCB1_chr7_87498017_87605884	HG00639	hp1	a0004	a0004c0007	a0004c0007t0001	a0004c0007t0001g0258	PUR	AMR	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	HG00639	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0088	PUR	AMR	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0226	PUR	AMR	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0211	PUR	AMR	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	HG00639	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0276	PUR	AMR	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	HG00639	hp2	a0012	a0012c0013	a0012c0013t0001	a0012c0013t0001g0099	PUR	AMR	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0066	PUR	AMR	ABCB7	chrX	75046048	75161283
ABCB7_chrX_75046048_75161283	HG00639	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0177	PUR	AMR	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0045	PUR	AMR	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	HG00639	hp2	a0004	a0004c0005	a0004c0005t0004	a0004c0005t0004g0008	PUR	AMR	ABCB8	chr7	151023450	151052782
ABCC10_chr6_43422541_43455427	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	PUR	AMR	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	HG00639	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0036	PUR	AMR	ABCC10	chr6	43422541	43455427
ABCC1_chr16_15944616_16148053	HG00639	hp1	a0001	a0001c0012	a0001c0012t0011	a0001c0012t0011g0081	PUR	AMR	ABCC1	chr16	15944616	16148053
ABCC1_chr16_15944616_16148053	HG00639	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0053	PUR	AMR	ABCC1	chr16	15944616	16148053
ABCC2_chr10_99777640_99857594	HG00639	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0003	PUR	AMR	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	HG00639	hp2	a0019	a0019c0023	a0019c0023t0001	a0019c0023t0001g0219	PUR	AMR	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0181	PUR	AMR	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	HG00639	hp2	a0001	a0001c0037	a0001c0037t0001	a0001c0037t0001g0288	PUR	AMR	ABCC3	chr17	50629881	50697253
ABCC4_chr13_95014835_95306451	HG00639	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0155	PUR	AMR	ABCC4	chr13	95014835	95306451
ABCC4_chr13_95014835_95306451	HG00639	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0182	PUR	AMR	ABCC4	chr13	95014835	95306451
ABCC5_chr3_183914934_184022884	HG00639	hp1	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0123	PUR	AMR	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	HG00639	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0348	PUR	AMR	ABCC5	chr3	183914934	184022884
ABCC6_chr16_16144565_16228494	HG00639	hp1	a0005	a0005c0012	a0005c0012t0001	a0005c0012t0001g0130	PUR	AMR	ABCC6	chr16	16144565	16228494
ABCC6_chr16_16144565_16228494	HG00639	hp2	a0002	a0002c0068	a0002c0068t0001	a0002c0068t0001g0097	PUR	AMR	ABCC6	chr16	16144565	16228494