JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ABCC8_chr11_17387885_17481845	HG00639	hp1	a0001	a0001c0077	a0001c0077t0001	a0001c0077t0001g0313	PUR	AMR	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	HG00639	hp2	a0001	a0001c0020	a0001c0020t0001	a0001c0020t0001g0156	PUR	AMR	ABCC8	chr11	17387885	17481845
ABCC9_chr12_21792389_21946426	HG00639	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0027	PUR	AMR	ABCC9	chr12	21792389	21946426
ABCC9_chr12_21792389_21946426	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	PUR	AMR	ABCC9	chr12	21792389	21946426
ABCD1_chrX_153719856_153749755	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	ABCD1	chrX	153719856	153749755
ABCD1_chrX_153719856_153749755	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ABCD1	chrX	153719856	153749755
ABCD2_chr12_39545033_39624803	HG00639	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0288	PUR	AMR	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0239	PUR	AMR	ABCD2	chr12	39545033	39624803
ABCD3_chr1_94413389_94523663	HG00639	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0099	PUR	AMR	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	HG00639	hp2	a0001	a0001c0001	a0001c0001t0017	a0001c0001t0017g0235	PUR	AMR	ABCD3	chr1	94413389	94523663
ABCD4_chr14_74280269_74307934	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	PUR	AMR	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	HG00639	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0007	PUR	AMR	ABCD4	chr14	74280269	74307934
ABCF1_chr6_30566442_30596522	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	PUR	AMR	ABCF1	chr6	30566442	30596522
ABCF2_chr7_151206484_151232205	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	PUR	AMR	ABCF2	chr7	151206484	151232205
ABCF3_chr3_184181199_184199005	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	PUR	AMR	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0044	PUR	AMR	ABCF3	chr3	184181199	184199005
ABCG1_chr21_42214140_42302244	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0214	PUR	AMR	ABCG1	chr21	42214140	42302244
ABCG1_chr21_42214140_42302244	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0289	PUR	AMR	ABCG1	chr21	42214140	42302244
ABCG2_chr4_88085269_88163639	HG00639	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0181	PUR	AMR	ABCG2	chr4	88085269	88163639
ABCG2_chr4_88085269_88163639	HG00639	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0216	PUR	AMR	ABCG2	chr4	88085269	88163639
ABCG4_chr11_119144052_119167653	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABCG4	chr11	119144052	119167653
ABCG4_chr11_119144052_119167653	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABCG4	chr11	119144052	119167653
ABCG5_chr2_43807472_43843839	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABCG5	chr2	43807472	43843839
ABCG5_chr2_43807472_43843839	HG00639	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0018	PUR	AMR	ABCG5	chr2	43807472	43843839
ABCG8_chr2_43833971_43887988	HG00639	hp1	a0001	a0001c0001	a0001c0001t0074	a0001c0001t0074g0049	PUR	AMR	ABCG8	chr2	43833971	43887988
ABCG8_chr2_43833971_43887988	HG00639	hp2	a0003	a0003c0002	a0003c0002t0017	a0003c0002t0017g0174	PUR	AMR	ABCG8	chr2	43833971	43887988
ABHD10_chr3_111974026_111998368	HG00639	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	PUR	AMR	ABHD10	chr3	111974026	111998368
ABHD10_chr3_111974026_111998368	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PUR	AMR	ABHD10	chr3	111974026	111998368
ABHD11_chr7_73731094_73743802	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABHD11	chr7	73731094	73743802
ABHD11_chr7_73731094_73743802	HG00639	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	PUR	AMR	ABHD11	chr7	73731094	73743802
ABHD12B_chr14_50867053_50909970	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	PUR	AMR	ABHD12B	chr14	50867053	50909970
ABHD12B_chr14_50867053_50909970	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0184	PUR	AMR	ABHD12B	chr14	50867053	50909970
ABHD12_chr20_25295214_25395835	HG00639	hp1	a0002	a0002c0006	a0002c0006t0002	a0002c0006t0002g0174	PUR	AMR	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	PUR	AMR	ABHD12	chr20	25295214	25395835
ABHD13_chr13_108213392_108239243	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	HG00639	hp2	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0025	PUR	AMR	ABHD13	chr13	108213392	108239243
ABHD15_chr17_29555547_29572037	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0070	PUR	AMR	ABHD15	chr17	29555547	29572037
ABHD15_chr17_29555547_29572037	HG00639	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0007	PUR	AMR	ABHD15	chr17	29555547	29572037
ABHD16B_chr20_63856498_63867988	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	PUR	AMR	ABHD16B	chr20	63856498	63867988
ABHD16B_chr20_63856498_63867988	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	PUR	AMR	ABHD16B	chr20	63856498	63867988
ABHD17A_chr19_1871810_1890496	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABHD17A	chr19	1871810	1890496
ABHD18_chr4_127960406_128044953	HG00639	hp1	a0001	a0001c0001	a0001c0001t0024	a0001c0001t0024g0111	PUR	AMR	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	HG00639	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0197	PUR	AMR	ABHD18	chr4	127960406	128044953
ABHD1_chr2_27118815_27135812	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	PUR	AMR	ABHD1	chr2	27118815	27135812
ABHD3_chr18_21645901_21709774	HG00639	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0211	PUR	AMR	ABHD3	chr18	21645901	21709774
ABHD3_chr18_21645901_21709774	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ABHD3	chr18	21645901	21709774