JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACADS_chr12_120720826_120745008	HG00639	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0205	PUR	AMR	ACADS	chr12	120720826	120745008
ACADS_chr12_120720826_120745008	HG00639	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0148	PUR	AMR	ACADS	chr12	120720826	120745008
ACADVL_chr17_7214938_7230266	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACADVL	chr17	7214938	7230266
ACADVL_chr17_7214938_7230266	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACADVL	chr17	7214938	7230266
ACAN_chr15_88798436_88880353	HG00639	hp1	a0008	a0008c0007	a0008c0007t0001	a0008c0007t0001g0214	PUR	AMR	ACAN	chr15	88798436	88880353
ACAN_chr15_88798436_88880353	HG00639	hp2	a0002	a0002c0001	a0002c0001t0001	a0002c0001t0001g0233	PUR	AMR	ACAN	chr15	88798436	88880353
ACAP1_chr17_7331529_7356477	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0197	PUR	AMR	ACAP1	chr17	7331529	7356477
ACAP1_chr17_7331529_7356477	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0046	PUR	AMR	ACAP1	chr17	7331529	7356477
ACAP3_chr1_1287391_1312930	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	PUR	AMR	ACAP3	chr1	1287391	1312930
ACAP3_chr1_1287391_1312930	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	PUR	AMR	ACAP3	chr1	1287391	1312930
ACAT1_chr11_108116567_108152603	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	PUR	AMR	ACAT1	chr11	108116567	108152603
ACAT1_chr11_108116567_108152603	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PUR	AMR	ACAT1	chr11	108116567	108152603
ACAT2_chr6_159757045_159784112	HG00639	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0012	PUR	AMR	ACAT2	chr6	159757045	159784112
ACAT2_chr6_159757045_159784112	HG00639	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0122	PUR	AMR	ACAT2	chr6	159757045	159784112
ACBD3_chr1_226139679_226191741	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0296	PUR	AMR	ACBD3	chr1	226139679	226191741
ACBD3_chr1_226139679_226191741	HG00639	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0123	PUR	AMR	ACBD3	chr1	226139679	226191741
ACBD4_chr17_45130687_45149176	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	ACBD4	chr17	45130687	45149176
ACBD4_chr17_45130687_45149176	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PUR	AMR	ACBD4	chr17	45130687	45149176
ACBD6_chr1_180283230_180507577	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	PUR	AMR	ACBD6	chr1	180283230	180507577
ACBD6_chr1_180283230_180507577	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	ACBD6	chr1	180283230	180507577
ACBD7_chr10_15070475_15093776	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	PUR	AMR	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	HG00639	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0152	PUR	AMR	ACBD7	chr10	15070475	15093776
ACCSL_chr11_44042981_44064977	HG00639	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0047	PUR	AMR	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	PUR	AMR	ACCSL	chr11	44042981	44064977
ACCS_chr11_44061270_44089237	HG00639	hp1	a0002	a0002c0004	a0002c0004t0007	a0002c0004t0007g0136	PUR	AMR	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACCS	chr11	44061270	44089237
ACE2_chrX_15556033_15605960	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	PUR	AMR	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0053	PUR	AMR	ACE2	chrX	15556033	15605960
ACER1_chr19_6301142_6338612	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	PUR	AMR	ACER1	chr19	6301142	6338612
ACER1_chr19_6301142_6338612	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0293	PUR	AMR	ACER1	chr19	6301142	6338612
ACER2_chr9_19404009_19457505	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0308	PUR	AMR	ACER2	chr9	19404009	19457505
ACER2_chr9_19404009_19457505	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0278	PUR	AMR	ACER2	chr9	19404009	19457505
ACER3_chr11_76855918_77031797	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0156	PUR	AMR	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	HG00639	hp2	a0002	a0002c0002	a0002c0002t0105	a0002c0002t0105g0253	PUR	AMR	ACER3	chr11	76855918	77031797
ACE_chr17_63472061_63503373	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	PUR	AMR	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACE	chr17	63472061	63503373
ACHE_chr7_100884994_100900888	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	ACHE	chr7	100884994	100900888
ACHE_chr7_100884994_100900888	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	ACHE	chr7	100884994	100900888
ACIN1_chr14_23053564_23100136	HG00639	hp1	a0004	a0004c0008	a0004c0008t0002	a0004c0008t0002g0184	PUR	AMR	ACIN1	chr14	23053564	23100136
ACIN1_chr14_23053564_23100136	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0252	PUR	AMR	ACIN1	chr14	23053564	23100136
ACKR1_chr1_159199875_159211500	HG00639	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0005	PUR	AMR	ACKR1	chr1	159199875	159211500
ACKR1_chr1_159199875_159211500	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACKR1	chr1	159199875	159211500
ACKR2_chr3_42804445_42872286	HG00639	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0258	PUR	AMR	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	HG00639	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0207	PUR	AMR	ACKR2	chr3	42804445	42872286
ACKR3_chr2_236564825_236587354	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	PUR	AMR	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	PUR	AMR	ACKR3	chr2	236564825	236587354
ACLY_chr17_41861918_41923951	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	PUR	AMR	ACLY	chr17	41861918	41923951
ACLY_chr17_41861918_41923951	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0228	PUR	AMR	ACLY	chr17	41861918	41923951
ACMSD_chr2_134833616_134907034	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0056	PUR	AMR	ACMSD	chr2	134833616	134907034
ACMSD_chr2_134833616_134907034	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0344	PUR	AMR	ACMSD	chr2	134833616	134907034