JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACO1_chr9_32379643_32459769	HG00639	hp1	a0001	a0001c0001	a0001c0001t0029	a0001c0001t0029g0017	PUR	AMR	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	HG00639	hp2	a0001	a0001c0002	a0001c0002t0010	a0001c0002t0010g0243	PUR	AMR	ACO1	chr9	32379643	32459769
ACO2_chr22_41464117_41533974	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0174	PUR	AMR	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	HG00639	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0318	PUR	AMR	ACO2	chr22	41464117	41533974
ACOD1_chr13_76943511_76963638	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0005	PUR	AMR	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PUR	AMR	ACOD1	chr13	76943511	76963638
ACOT11_chr1_54543228_54615329	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0048	PUR	AMR	ACOT11	chr1	54543228	54615329
ACOT11_chr1_54543228_54615329	HG00639	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0157	PUR	AMR	ACOT11	chr1	54543228	54615329
ACOT13_chr6_24662077_24710046	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0071	PUR	AMR	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	HG00639	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0045	PUR	AMR	ACOT13	chr6	24662077	24710046
ACOT1_chr14_73532143_73548796	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PUR	AMR	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	PUR	AMR	ACOT1	chr14	73532143	73548796
ACOT4_chr14_73586873_73600766	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT4_chr14_73586873_73600766	HG00639	hp2	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0010	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT6_chr14_73607517_73624888	HG00639	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0011	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT6_chr14_73607517_73624888	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT8_chr20_45836721_45862392	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOT8_chr20_45836721_45862392	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOT9_chrX_23696055_23748276	HG00639	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0235	PUR	AMR	ACOT9	chrX	23696055	23748276
ACOT9_chrX_23696055_23748276	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	PUR	AMR	ACOT9	chrX	23696055	23748276
ACOX1_chr17_75936507_75984166	HG00639	hp1	a0001	a0001c0003	a0001c0003t0044	a0001c0003t0044g0137	PUR	AMR	ACOX1	chr17	75936507	75984166
ACOX1_chr17_75936507_75984166	HG00639	hp2	a0001	a0001c0001	a0001c0001t0043	a0001c0001t0043g0190	PUR	AMR	ACOX1	chr17	75936507	75984166
ACOX2_chr3_58500136_58542190	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX2_chr3_58500136_58542190	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX3_chr4_8361282_8445723	HG00639	hp1	a0001	a0001c0019	a0001c0019t0001	a0001c0019t0001g0184	PUR	AMR	ACOX3	chr4	8361282	8445723
ACOX3_chr4_8361282_8445723	HG00639	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0331	PUR	AMR	ACOX3	chr4	8361282	8445723
ACP1_chr2_259947_283283	HG00639	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	PUR	AMR	ACP1	chr2	259947	283283
ACP1_chr2_259947_283283	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	PUR	AMR	ACP1	chr2	259947	283283
ACP2_chr11_47234302_47253814	HG00639	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	ACP2	chr11	47234302	47253814
ACP2_chr11_47234302_47253814	HG00639	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0004	PUR	AMR	ACP2	chr11	47234302	47253814
ACP3_chr3_132312407_132363841	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0276	PUR	AMR	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	HG00639	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0278	PUR	AMR	ACP3	chr3	132312407	132363841
ACP4_chr19_50785415_50800219	HG00639	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0003	PUR	AMR	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACP4	chr19	50785415	50800219
ACP5_chr19_11569660_11582645	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	PUR	AMR	ACP5	chr19	11569660	11582645
ACP5_chr19_11569660_11582645	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0053	PUR	AMR	ACP5	chr19	11569660	11582645
ACP6_chr1_147637230_147675524	HG00639	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0035	PUR	AMR	ACP6	chr1	147637230	147675524
ACP6_chr1_147637230_147675524	HG00639	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0041	PUR	AMR	ACP6	chr1	147637230	147675524
ACP7_chr19_39079368_39116493	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	PUR	AMR	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	HG00639	hp2	a0001	a0001c0003	a0001c0003t0020	a0001c0003t0020g0264	PUR	AMR	ACP7	chr19	39079368	39116493
ACRBP_chr12_6633075_6652432	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACRBP	chr12	6633075	6652432
ACRV1_chr11_125666522_125685847	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	PUR	AMR	ACRV1	chr11	125666522	125685847
ACRV1_chr11_125666522_125685847	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	PUR	AMR	ACRV1	chr11	125666522	125685847
ACR_chr22_50733204_50750339	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PUR	AMR	ACR	chr22	50733204	50750339
ACR_chr22_50733204_50750339	HG00639	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	ACR	chr22	50733204	50750339
ACSBG1_chr15_78162468_78239565	HG00639	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0303	PUR	AMR	ACSBG1	chr15	78162468	78239565
ACSBG1_chr15_78162468_78239565	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	PUR	AMR	ACSBG1	chr15	78162468	78239565
ACSF2_chr17_50421218_50479837	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0065	PUR	AMR	ACSF2	chr17	50421218	50479837
ACSF2_chr17_50421218_50479837	HG00639	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0225	PUR	AMR	ACSF2	chr17	50421218	50479837