JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ADAM12_chr10_126007391_126393477	HG00639	hp1	a0002	a0002c0001	a0002c0001t0001	a0002c0001t0001g0115	PUR	AMR	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	HG00639	hp2	a0001	a0001c0008	a0001c0008t0002	a0001c0008t0002g0153	PUR	AMR	ADAM12	chr10	126007391	126393477
ADAM15_chr1_155046316_155067775	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0042	PUR	AMR	ADAM15	chr1	155046316	155067775
ADAM15_chr1_155046316_155067775	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	PUR	AMR	ADAM15	chr1	155046316	155067775
ADAM17_chr2_9483486_9560830	HG00639	hp1	a0001	a0001c0012	a0001c0012t0001	a0001c0012t0001g0032	PUR	AMR	ADAM17	chr2	9483486	9560830
ADAM17_chr2_9483486_9560830	HG00639	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0113	PUR	AMR	ADAM17	chr2	9483486	9560830
ADAM18_chr8_39579568_39735065	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0118	PUR	AMR	ADAM18	chr8	39579568	39735065
ADAM18_chr8_39579568_39735065	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	PUR	AMR	ADAM18	chr8	39579568	39735065
ADAM19_chr5_157472304_157580775	HG00639	hp1	a0003	a0003c0003	a0003c0003t0022	a0003c0003t0022g0218	PUR	AMR	ADAM19	chr5	157472304	157580775
ADAM19_chr5_157472304_157580775	HG00639	hp2	a0018	a0018c0017	a0018c0017t0022	a0018c0017t0022g0024	PUR	AMR	ADAM19	chr5	157472304	157580775
ADAM20_chr14_70517358_70540004	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	ADAM20	chr14	70517358	70540004
ADAM20_chr14_70517358_70540004	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ADAM20	chr14	70517358	70540004
ADAM21_chr14_70447174_70464905	HG00639	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0001	PUR	AMR	ADAM21	chr14	70447174	70464905
ADAM21_chr14_70447174_70464905	HG00639	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0001	PUR	AMR	ADAM21	chr14	70447174	70464905
ADAM22_chr7_87929251_88207889	HG00639	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0114	PUR	AMR	ADAM22	chr7	87929251	88207889
ADAM22_chr7_87929251_88207889	HG00639	hp2	a0001	a0001c0001	a0001c0001t0023	a0001c0001t0023g0028	PUR	AMR	ADAM22	chr7	87929251	88207889
ADAM28_chr8_24289069_24364014	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0297	PUR	AMR	ADAM28	chr8	24289069	24364014
ADAM28_chr8_24289069_24364014	HG00639	hp2	a0001	a0001c0001	a0001c0001t0010	a0001c0001t0010g0017	PUR	AMR	ADAM28	chr8	24289069	24364014
ADAM29_chr4_174913358_174983180	HG00639	hp1	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0267	PUR	AMR	ADAM29	chr4	174913358	174983180
ADAM29_chr4_174913358_174983180	HG00639	hp2	a0006	a0006c0010	a0006c0010t0003	a0006c0010t0003g0051	PUR	AMR	ADAM29	chr4	174913358	174983180
ADAM2_chr8_39738735_39843227	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0302	PUR	AMR	ADAM2	chr8	39738735	39843227
ADAM2_chr8_39738735_39843227	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0246	PUR	AMR	ADAM2	chr8	39738735	39843227
ADAM32_chr8_39102734_39289917	HG00639	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0120	PUR	AMR	ADAM32	chr8	39102734	39289917
ADAM32_chr8_39102734_39289917	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	PUR	AMR	ADAM32	chr8	39102734	39289917
ADAM33_chr20_3662975_3687010	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0283	PUR	AMR	ADAM33	chr20	3662975	3687010
ADAM33_chr20_3662975_3687010	HG00639	hp2	a0000	a0000c0003	a0000c0003t0032	a0000c0003t0032g0295	PUR	AMR	ADAM33	chr20	3662975	3687010
ADAM7_chr8_24436026_24514565	HG00639	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0174	PUR	AMR	ADAM7	chr8	24436026	24514565
ADAM7_chr8_24436026_24514565	HG00639	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0097	PUR	AMR	ADAM7	chr8	24436026	24514565
ADAM8_chr10_133257423_133281868	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ADAM8	chr10	133257423	133281868
ADAM8_chr10_133257423_133281868	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ADAM8	chr10	133257423	133281868
ADAM9_chr8_38991973_39110261	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0247	PUR	AMR	ADAM9	chr8	38991973	39110261
ADAM9_chr8_38991973_39110261	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0240	PUR	AMR	ADAM9	chr8	38991973	39110261
ADAMDEC1_chr8_24379285_24411013	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	PUR	AMR	ADAMDEC1	chr8	24379285	24411013
ADAMDEC1_chr8_24379285_24411013	HG00639	hp2	a0008	a0008c0010	a0008c0010t0003	a0008c0010t0003g0110	PUR	AMR	ADAMDEC1	chr8	24379285	24411013
ADAMTS10_chr19_8575240_8615715	HG00639	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0136	PUR	AMR	ADAMTS10	chr19	8575240	8615715
ADAMTS10_chr19_8575240_8615715	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0164	PUR	AMR	ADAMTS10	chr19	8575240	8615715
ADAMTS13_chr9_133417367_133464386	HG00639	hp1	a0029	a0029c0049	a0029c0049t0001	a0029c0049t0001g0163	PUR	AMR	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	HG00639	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0105	PUR	AMR	ADAMTS13	chr9	133417367	133464386
ADAMTS14_chr10_70667506_70767441	HG00639	hp1	a0003	a0003c0077	a0003c0077t0015	a0003c0077t0015g0234	PUR	AMR	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	HG00639	hp2	a0002	a0002c0001	a0002c0001t0005	a0002c0001t0005g0055	PUR	AMR	ADAMTS14	chr10	70667506	70767441
ADAMTS15_chr11_130443645_130481645	HG00639	hp1	a0003	a0003c0005	a0003c0005t0001	a0003c0005t0001g0254	PUR	AMR	ADAMTS15	chr11	130443645	130481645
ADAMTS15_chr11_130443645_130481645	HG00639	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	PUR	AMR	ADAMTS15	chr11	130443645	130481645
ADAMTS16_chr5_5135330_5325304	HG00639	hp1	a0003	a0003c0017	a0003c0017t0013	a0003c0017t0013g0239	PUR	AMR	ADAMTS16	chr5	5135330	5325304
ADAMTS16_chr5_5135330_5325304	HG00639	hp2	a0002	a0002c0002	a0002c0002t0036	a0002c0002t0036g0217	PUR	AMR	ADAMTS16	chr5	5135330	5325304
ADAMTS18_chr16_77277128_77440034	HG00639	hp1	a0006	a0006c0005	a0006c0005t0003	a0006c0005t0003g0270	PUR	AMR	ADAMTS18	chr16	77277128	77440034
ADAMTS18_chr16_77277128_77440034	HG00639	hp2	a0005	a0005c0004	a0005c0004t0001	a0005c0004t0001g0246	PUR	AMR	ADAMTS18	chr16	77277128	77440034
ADAMTS19_chr5_129455298_129743683	HG00639	hp1	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0010	PUR	AMR	ADAMTS19	chr5	129455298	129743683
ADAMTS19_chr5_129455298_129743683	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0139	PUR	AMR	ADAMTS19	chr5	129455298	129743683
ADAMTS1_chr21_26830755_26850409	HG00639	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0005	PUR	AMR	ADAMTS1	chr21	26830755	26850409
ADAMTS1_chr21_26830755_26850409	HG00639	hp2	a0001	a0001c0001	a0001c0001t0031	a0001c0001t0031g0088	PUR	AMR	ADAMTS1	chr21	26830755	26850409