JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACOT2_chr14_73564213_73580655	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACOT2	chr14	73564213	73580655
ACOT4_chr14_73586873_73600766	HG01071	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT4_chr14_73586873_73600766	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT6_chr14_73607517_73624888	HG01071	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT6_chr14_73607517_73624888	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT8_chr20_45836721_45862392	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOT8_chr20_45836721_45862392	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOT9_chrX_23696055_23748276	HG01071	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0247	PUR	AMR	ACOT9	chrX	23696055	23748276
ACOT9_chrX_23696055_23748276	HG01071	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0249	PUR	AMR	ACOT9	chrX	23696055	23748276
ACOX1_chr17_75936507_75984166	HG01071	hp1	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0178	PUR	AMR	ACOX1	chr17	75936507	75984166
ACOX1_chr17_75936507_75984166	HG01071	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0203	PUR	AMR	ACOX1	chr17	75936507	75984166
ACOX2_chr3_58500136_58542190	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX2_chr3_58500136_58542190	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX3_chr4_8361282_8445723	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	PUR	AMR	ACOX3	chr4	8361282	8445723
ACOX3_chr4_8361282_8445723	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0356	PUR	AMR	ACOX3	chr4	8361282	8445723
ACP1_chr2_259947_283283	HG01071	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	PUR	AMR	ACP1	chr2	259947	283283
ACP1_chr2_259947_283283	HG01071	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	PUR	AMR	ACP1	chr2	259947	283283
ACP2_chr11_47234302_47253814	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	PUR	AMR	ACP2	chr11	47234302	47253814
ACP2_chr11_47234302_47253814	HG01071	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0005	PUR	AMR	ACP2	chr11	47234302	47253814
ACP4_chr19_50785415_50800219	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	HG01071	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	PUR	AMR	ACP4	chr19	50785415	50800219
ACP5_chr19_11569660_11582645	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	PUR	AMR	ACP5	chr19	11569660	11582645
ACP5_chr19_11569660_11582645	HG01071	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	PUR	AMR	ACP5	chr19	11569660	11582645
ACP6_chr1_147637230_147675524	HG01071	hp1	a0001	a0001c0002	a0001c0002t0017	a0001c0002t0017g0026	PUR	AMR	ACP6	chr1	147637230	147675524
ACP6_chr1_147637230_147675524	HG01071	hp2	a0001	a0001c0008	a0001c0008t0010	a0001c0008t0010g0119	PUR	AMR	ACP6	chr1	147637230	147675524
ACP7_chr19_39079368_39116493	HG01071	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0262	PUR	AMR	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	PUR	AMR	ACP7	chr19	39079368	39116493
ACRBP_chr12_6633075_6652432	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACRBP	chr12	6633075	6652432
ACRV1_chr11_125666522_125685847	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	PUR	AMR	ACRV1	chr11	125666522	125685847
ACRV1_chr11_125666522_125685847	HG01071	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0041	PUR	AMR	ACRV1	chr11	125666522	125685847
ACR_chr22_50733204_50750339	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACR	chr22	50733204	50750339
ACR_chr22_50733204_50750339	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACR	chr22	50733204	50750339
ACSBG1_chr15_78162468_78239565	HG01071	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0024	PUR	AMR	ACSBG1	chr15	78162468	78239565
ACSBG1_chr15_78162468_78239565	HG01071	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0002	PUR	AMR	ACSBG1	chr15	78162468	78239565
ACSBG2_chr19_6130667_6198091	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	PUR	AMR	ACSBG2	chr19	6130667	6198091
ACSBG2_chr19_6130667_6198091	HG01071	hp2	a0004	a0004c0003	a0004c0003t0001	a0004c0003t0001g0047	PUR	AMR	ACSBG2	chr19	6130667	6198091
ACSF2_chr17_50421218_50479837	HG01071	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0024	PUR	AMR	ACSF2	chr17	50421218	50479837
ACSF2_chr17_50421218_50479837	HG01071	hp2	a0003	a0003c0005	a0003c0005t0002	a0003c0005t0002g0021	PUR	AMR	ACSF2	chr17	50421218	50479837
ACSF3_chr16_89088852_89161233	HG01071	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0193	PUR	AMR	ACSF3	chr16	89088852	89161233
ACSF3_chr16_89088852_89161233	HG01071	hp2	a0001	a0001c0005	a0001c0005t0011	a0001c0005t0011g0311	PUR	AMR	ACSF3	chr16	89088852	89161233
ACSL1_chr4_184750595_184830968	HG01071	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0330	PUR	AMR	ACSL1	chr4	184750595	184830968
ACSL1_chr4_184750595_184830968	HG01071	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0321	PUR	AMR	ACSL1	chr4	184750595	184830968
ACSL3_chr2_222856036_222949639	HG01071	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0193	PUR	AMR	ACSL3	chr2	222856036	222949639
ACSL3_chr2_222856036_222949639	HG01071	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0041	PUR	AMR	ACSL3	chr2	222856036	222949639
ACSL4_chrX_109636335_109738257	HG01071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACSL4	chrX	109636335	109738257
ACSL4_chrX_109636335_109738257	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	PUR	AMR	ACSL4	chrX	109636335	109738257
ACSL5_chr10_112369116_112433376	HG01071	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0307	PUR	AMR	ACSL5	chr10	112369116	112433376
ACSL5_chr10_112369116_112433376	HG01071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACSL5	chr10	112369116	112433376
ACSL6_chr5_131944973_132016658	HG01071	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0012	PUR	AMR	ACSL6	chr5	131944973	132016658