JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ADAM33_chr20_3662975_3687010	HG01109	hp1	a0009	a0009c0016	a0009c0016t0004	a0009c0016t0004g0013	PUR	AMR	ADAM33	chr20	3662975	3687010
ADAM33_chr20_3662975_3687010	HG01109	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0004	PUR	AMR	ADAM33	chr20	3662975	3687010
ADAM7_chr8_24436026_24514565	HG01109	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0130	PUR	AMR	ADAM7	chr8	24436026	24514565
ADAM7_chr8_24436026_24514565	HG01109	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0197	PUR	AMR	ADAM7	chr8	24436026	24514565
ADAM8_chr10_133257423_133281868	HG01109	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0155	PUR	AMR	ADAM8	chr10	133257423	133281868
ADAM8_chr10_133257423_133281868	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ADAM8	chr10	133257423	133281868
ADAM9_chr8_38991973_39110261	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0064	PUR	AMR	ADAM9	chr8	38991973	39110261
ADAM9_chr8_38991973_39110261	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0298	PUR	AMR	ADAM9	chr8	38991973	39110261
ADAMDEC1_chr8_24379285_24411013	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	PUR	AMR	ADAMDEC1	chr8	24379285	24411013
ADAMDEC1_chr8_24379285_24411013	HG01109	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0129	PUR	AMR	ADAMDEC1	chr8	24379285	24411013
ADAMTS12_chr5_33518535_33896990	HG01109	hp1	a0005	a0005c0006	a0005c0006t0016	a0005c0006t0016g0158	PUR	AMR	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	HG01109	hp2	a0009	a0009c0038	a0009c0038t0003	a0009c0038t0003g0105	PUR	AMR	ADAMTS12	chr5	33518535	33896990
ADAMTS13_chr9_133417367_133464386	HG01109	hp1	a0001	a0001c0027	a0001c0027t0001	a0001c0027t0001g0274	PUR	AMR	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	PUR	AMR	ADAMTS13	chr9	133417367	133464386
ADAMTS14_chr10_70667506_70767441	HG01109	hp1	a0006	a0006c0015	a0006c0015t0017	a0006c0015t0017g0071	PUR	AMR	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	HG01109	hp2	a0001	a0001c0007	a0001c0007t0021	a0001c0007t0021g0077	PUR	AMR	ADAMTS14	chr10	70667506	70767441
ADAMTS15_chr11_130443645_130481645	HG01109	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0033	PUR	AMR	ADAMTS15	chr11	130443645	130481645
ADAMTS15_chr11_130443645_130481645	HG01109	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0340	PUR	AMR	ADAMTS15	chr11	130443645	130481645
ADAMTS16_chr5_5135330_5325304	HG01109	hp1	a0011	a0011c0021	a0011c0021t0001	a0011c0021t0001g0152	PUR	AMR	ADAMTS16	chr5	5135330	5325304
ADAMTS16_chr5_5135330_5325304	HG01109	hp2	a0001	a0001c0036	a0001c0036t0012	a0001c0036t0012g0231	PUR	AMR	ADAMTS16	chr5	5135330	5325304
ADAMTS18_chr16_77277128_77440034	HG01109	hp1	a0002	a0002c0007	a0002c0007t0038	a0002c0007t0038g0095	PUR	AMR	ADAMTS18	chr16	77277128	77440034
ADAMTS18_chr16_77277128_77440034	HG01109	hp2	a0002	a0002c0006	a0002c0006t0004	a0002c0006t0004g0283	PUR	AMR	ADAMTS18	chr16	77277128	77440034
ADAMTS1_chr21_26830755_26850409	HG01109	hp1	a0001	a0001c0001	a0001c0001t0056	a0001c0001t0056g0121	PUR	AMR	ADAMTS1	chr21	26830755	26850409
ADAMTS1_chr21_26830755_26850409	HG01109	hp2	a0001	a0001c0003	a0001c0003t0009	a0001c0003t0009g0050	PUR	AMR	ADAMTS1	chr21	26830755	26850409
ADAMTS20_chr12_43348866_43557203	HG01109	hp1	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0137	PUR	AMR	ADAMTS20	chr12	43348866	43557203
ADAMTS20_chr12_43348866_43557203	HG01109	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0120	PUR	AMR	ADAMTS20	chr12	43348866	43557203
ADAMTS3_chr4_72275969_72574221	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0164	PUR	AMR	ADAMTS3	chr4	72275969	72574221
ADAMTS3_chr4_72275969_72574221	HG01109	hp2	a0007	a0007c0013	a0007c0013t0001	a0007c0013t0001g0088	PUR	AMR	ADAMTS3	chr4	72275969	72574221
ADAMTS4_chr1_161179302_161204054	HG01109	hp1	a0003	a0003c0004	a0003c0004t0071	a0003c0004t0071g0217	PUR	AMR	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	HG01109	hp2	a0001	a0001c0002	a0001c0002t0184	a0001c0002t0184g0184	PUR	AMR	ADAMTS4	chr1	161179302	161204054
ADAMTS5_chr21_26912922_26972088	HG01109	hp1	a0003	a0003c0003	a0003c0003t0007	a0003c0003t0007g0267	PUR	AMR	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	HG01109	hp2	a0001	a0001c0001	a0001c0001t0056	a0001c0001t0056g0165	PUR	AMR	ADAMTS5	chr21	26912922	26972088
ADAMTS6_chr5_65143738_65486920	HG01109	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0103	PUR	AMR	ADAMTS6	chr5	65143738	65486920
ADAMTS6_chr5_65143738_65486920	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	PUR	AMR	ADAMTS6	chr5	65143738	65486920
ADAMTS7_chr15_78754206_78816464	HG01109	hp1	a0004	a0004c0004	a0004c0004t0004	a0004c0004t0004g0343	PUR	AMR	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	HG01109	hp2	a0014	a0014c0016	a0014c0016t0002	a0014c0016t0002g0293	PUR	AMR	ADAMTS7	chr15	78754206	78816464
ADAMTS8_chr11_130399923_130433609	HG01109	hp1	a0011	a0011c0013	a0011c0013t0002	a0011c0013t0002g0248	PUR	AMR	ADAMTS8	chr11	130399923	130433609
ADAMTS8_chr11_130399923_130433609	HG01109	hp2	a0013	a0013c0014	a0013c0014t0002	a0013c0014t0002g0044	PUR	AMR	ADAMTS8	chr11	130399923	130433609
ADAMTSL1_chr9_18469153_18915950	HG01109	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0076	PUR	AMR	ADAMTSL1	chr9	18469153	18915950
ADAMTSL1_chr9_18469153_18915950	HG01109	hp2	a0002	a0002c0001	a0002c0001t0009	a0002c0001t0009g0010	PUR	AMR	ADAMTSL1	chr9	18469153	18915950
ADAMTSL4_chr1_150544408_150565933	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PUR	AMR	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PUR	AMR	ADAMTSL4	chr1	150544408	150565933
ADAMTSL5_chr19_1500022_1518019	HG01109	hp1	a0009	a0009c0016	a0009c0016t0005	a0009c0016t0005g0149	PUR	AMR	ADAMTSL5	chr19	1500022	1518019
ADAMTSL5_chr19_1500022_1518019	HG01109	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0004	PUR	AMR	ADAMTSL5	chr19	1500022	1518019
ADAP2_chr17_30916945_30964322	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	PUR	AMR	ADAP2	chr17	30916945	30964322
ADAP2_chr17_30916945_30964322	HG01109	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0232	PUR	AMR	ADAP2	chr17	30916945	30964322
ADARB1_chr21_45069580_45231560	HG01109	hp1	a0001	a0001c0002	a0001c0002t0076	a0001c0002t0076g0081	PUR	AMR	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	HG01109	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0117	PUR	AMR	ADARB1	chr21	45069580	45231560
ADAR_chr1_154577057_154613186	HG01109	hp1	a0003	a0003c0004	a0003c0004t0007	a0003c0004t0007g0007	PUR	AMR	ADAR	chr1	154577057	154613186
ADAR_chr1_154577057_154613186	HG01109	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	PUR	AMR	ADAR	chr1	154577057	154613186