JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACP2_chr11_47234302_47253814	HG01109	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0006	PUR	AMR	ACP2	chr11	47234302	47253814
ACP2_chr11_47234302_47253814	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	ACP2	chr11	47234302	47253814
ACP4_chr19_50785415_50800219	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PUR	AMR	ACP4	chr19	50785415	50800219
ACP5_chr19_11569660_11582645	HG01109	hp1	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0005	PUR	AMR	ACP5	chr19	11569660	11582645
ACP5_chr19_11569660_11582645	HG01109	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0014	PUR	AMR	ACP5	chr19	11569660	11582645
ACP6_chr1_147637230_147675524	HG01109	hp1	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0039	PUR	AMR	ACP6	chr1	147637230	147675524
ACP6_chr1_147637230_147675524	HG01109	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0002	PUR	AMR	ACP6	chr1	147637230	147675524
ACP7_chr19_39079368_39116493	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0380	PUR	AMR	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	HG01109	hp2	a0001	a0001c0006	a0001c0006t0008	a0001c0006t0008g0022	PUR	AMR	ACP7	chr19	39079368	39116493
ACRBP_chr12_6633075_6652432	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACRBP	chr12	6633075	6652432
ACRV1_chr11_125666522_125685847	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	ACRV1	chr11	125666522	125685847
ACRV1_chr11_125666522_125685847	HG01109	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0033	PUR	AMR	ACRV1	chr11	125666522	125685847
ACR_chr22_50733204_50750339	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	PUR	AMR	ACR	chr22	50733204	50750339
ACR_chr22_50733204_50750339	HG01109	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	ACR	chr22	50733204	50750339
ACSBG1_chr15_78162468_78239565	HG01109	hp1	a0003	a0003c0004	a0003c0004t0003	a0003c0004t0003g0294	PUR	AMR	ACSBG1	chr15	78162468	78239565
ACSBG1_chr15_78162468_78239565	HG01109	hp2	a0002	a0002c0005	a0002c0005t0005	a0002c0005t0005g0100	PUR	AMR	ACSBG1	chr15	78162468	78239565
ACSF2_chr17_50421218_50479837	HG01109	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0145	PUR	AMR	ACSF2	chr17	50421218	50479837
ACSF2_chr17_50421218_50479837	HG01109	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0208	PUR	AMR	ACSF2	chr17	50421218	50479837
ACSF3_chr16_89088852_89161233	HG01109	hp1	a0001	a0001c0005	a0001c0005t0011	a0001c0005t0011g0313	PUR	AMR	ACSF3	chr16	89088852	89161233
ACSF3_chr16_89088852_89161233	HG01109	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0015	PUR	AMR	ACSF3	chr16	89088852	89161233
ACSL1_chr4_184750595_184830968	HG01109	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0217	PUR	AMR	ACSL1	chr4	184750595	184830968
ACSL1_chr4_184750595_184830968	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0190	PUR	AMR	ACSL1	chr4	184750595	184830968
ACSL3_chr2_222856036_222949639	HG01109	hp1	a0002	a0002c0003	a0002c0003t0020	a0002c0003t0020g0012	PUR	AMR	ACSL3	chr2	222856036	222949639
ACSL3_chr2_222856036_222949639	HG01109	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0196	PUR	AMR	ACSL3	chr2	222856036	222949639
ACSL4_chrX_109636335_109738257	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0100	PUR	AMR	ACSL4	chrX	109636335	109738257
ACSL5_chr10_112369116_112433376	HG01109	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0197	PUR	AMR	ACSL5	chr10	112369116	112433376
ACSL5_chr10_112369116_112433376	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0109	PUR	AMR	ACSL5	chr10	112369116	112433376
ACSL6_chr5_131944973_132016658	HG01109	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0032	PUR	AMR	ACSL6	chr5	131944973	132016658
ACSL6_chr5_131944973_132016658	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	ACSL6	chr5	131944973	132016658
ACSM1_chr16_20618235_20702680	HG01109	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0072	PUR	AMR	ACSM1	chr16	20618235	20702680
ACSM1_chr16_20618235_20702680	HG01109	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0227	PUR	AMR	ACSM1	chr16	20618235	20702680
ACSM2A_chr16_20446521_20492669	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	PUR	AMR	ACSM2A	chr16	20446521	20492669
ACSM2A_chr16_20446521_20492669	HG01109	hp2	a0007	a0007c0007	a0007c0007t0001	a0007c0007t0001g0068	PUR	AMR	ACSM2A	chr16	20446521	20492669
ACSM2B_chr16_20531226_20581367	HG01109	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0236	PUR	AMR	ACSM2B	chr16	20531226	20581367
ACSM2B_chr16_20531226_20581367	HG01109	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0248	PUR	AMR	ACSM2B	chr16	20531226	20581367
ACSM3_chr16_20759014_20802581	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	PUR	AMR	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	PUR	AMR	ACSM3	chr16	20759014	20802581
ACSM4_chr12_7299072_7333719	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	HG01109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	PUR	AMR	ACSM4	chr12	7299072	7333719
ACSM5_chr16_20404534_20446336	HG01109	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0067	PUR	AMR	ACSM5	chr16	20404534	20446336
ACSM5_chr16_20404534_20446336	HG01109	hp2	a0027	a0027c0033	a0027c0033t0004	a0027c0033t0004g0287	PUR	AMR	ACSM5	chr16	20404534	20446336
ACSM6_chr10_95189238_95233929	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PUR	AMR	ACSM6	chr10	95189238	95233929
ACSM6_chr10_95189238_95233929	HG01109	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0006	PUR	AMR	ACSM6	chr10	95189238	95233929
ACSS1_chr20_25001237_25063139	HG01109	hp1	a0007	a0007c0015	a0007c0015t0007	a0007c0015t0007g0216	PUR	AMR	ACSS1	chr20	25001237	25063139
ACSS1_chr20_25001237_25063139	HG01109	hp2	a0003	a0003c0006	a0003c0006t0001	a0003c0006t0001g0020	PUR	AMR	ACSS1	chr20	25001237	25063139
ACSS2_chr20_34871612_34932959	HG01109	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0134	PUR	AMR	ACSS2	chr20	34871612	34932959
ACSS2_chr20_34871612_34932959	HG01109	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0087	PUR	AMR	ACSS2	chr20	34871612	34932959
ACSS3_chr12_81073079_81266210	HG01109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0247	PUR	AMR	ACSS3	chr12	81073079	81266210