JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACCSL_chr11_44042981_44064977	HG01167	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0046	PUR	AMR	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACCSL	chr11	44042981	44064977
ACCS_chr11_44061270_44089237	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0063	PUR	AMR	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACCS	chr11	44061270	44089237
ACD_chr16_67652512_67665260	HG01167	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0004	PUR	AMR	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	HG01167	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	ACD	chr16	67652512	67665260
ACE2_chrX_15556033_15605960	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	PUR	AMR	ACE2	chrX	15556033	15605960
ACER3_chr11_76855918_77031797	HG01167	hp1	a0001	a0001c0001	a0001c0001t0129	a0001c0001t0129g0071	PUR	AMR	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	HG01167	hp2	a0002	a0002c0004	a0002c0004t0006	a0002c0004t0006g0305	PUR	AMR	ACER3	chr11	76855918	77031797
ACE_chr17_63472061_63503373	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	PUR	AMR	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACE	chr17	63472061	63503373
ACHE_chr7_100884994_100900888	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACHE	chr7	100884994	100900888
ACHE_chr7_100884994_100900888	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACHE	chr7	100884994	100900888
ACIN1_chr14_23053564_23100136	HG01167	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0001	PUR	AMR	ACIN1	chr14	23053564	23100136
ACIN1_chr14_23053564_23100136	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0295	PUR	AMR	ACIN1	chr14	23053564	23100136
ACKR1_chr1_159199875_159211500	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACKR1	chr1	159199875	159211500
ACKR1_chr1_159199875_159211500	HG01167	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0005	PUR	AMR	ACKR1	chr1	159199875	159211500
ACKR2_chr3_42804445_42872286	HG01167	hp1	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0003	PUR	AMR	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	HG01167	hp2	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0308	PUR	AMR	ACKR2	chr3	42804445	42872286
ACKR3_chr2_236564825_236587354	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	PUR	AMR	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACKR3	chr2	236564825	236587354
ACKR4_chr3_132592270_132607644	HG01167	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0004	PUR	AMR	ACKR4	chr3	132592270	132607644
ACKR4_chr3_132592270_132607644	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACKR4	chr3	132592270	132607644
ACO1_chr9_32379643_32459769	HG01167	hp1	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0184	PUR	AMR	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	HG01167	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0294	PUR	AMR	ACO1	chr9	32379643	32459769
ACO2_chr22_41464117_41533974	HG01167	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0302	PUR	AMR	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	PUR	AMR	ACO2	chr22	41464117	41533974
ACOT11_chr1_54543228_54615329	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0076	PUR	AMR	ACOT11	chr1	54543228	54615329
ACOT11_chr1_54543228_54615329	HG01167	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0112	PUR	AMR	ACOT11	chr1	54543228	54615329
ACOT12_chr5_81324996_81399134	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	PUR	AMR	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	HG01167	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0006	PUR	AMR	ACOT12	chr5	81324996	81399134
ACOT13_chr6_24662077_24710046	HG01167	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	PUR	AMR	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	HG01167	hp2	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0038	PUR	AMR	ACOT13	chr6	24662077	24710046
ACOT2_chr14_73564213_73580655	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACOT2	chr14	73564213	73580655
ACOT2_chr14_73564213_73580655	HG01167	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0077	PUR	AMR	ACOT2	chr14	73564213	73580655
ACOT4_chr14_73586873_73600766	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT4_chr14_73586873_73600766	HG01167	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0019	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT6_chr14_73607517_73624888	HG01167	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0005	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT6_chr14_73607517_73624888	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT7_chr1_6259272_6398767	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	PUR	AMR	ACOT7	chr1	6259272	6398767
ACOT7_chr1_6259272_6398767	HG01167	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0124	PUR	AMR	ACOT7	chr1	6259272	6398767
ACOT8_chr20_45836721_45862392	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOT8_chr20_45836721_45862392	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOT9_chrX_23696055_23748276	HG01167	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0282	PUR	AMR	ACOT9	chrX	23696055	23748276
ACOX2_chr3_58500136_58542190	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX2_chr3_58500136_58542190	HG01167	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0047	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX3_chr4_8361282_8445723	HG01167	hp1	a0001	a0001c0001	a0001c0001t0010	a0001c0001t0010g0102	PUR	AMR	ACOX3	chr4	8361282	8445723
ACOX3_chr4_8361282_8445723	HG01167	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0317	PUR	AMR	ACOX3	chr4	8361282	8445723
ACOXL_chr2_110727573_111123548	HG01167	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0019	PUR	AMR	ACOXL	chr2	110727573	111123548
ACOXL_chr2_110727573_111123548	HG01167	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0081	PUR	AMR	ACOXL	chr2	110727573	111123548