JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACKR3_chr2_236564825_236587354	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	PUR	AMR	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	ACKR3	chr2	236564825	236587354
ACKR4_chr3_132592270_132607644	HG01175	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0016	PUR	AMR	ACKR4	chr3	132592270	132607644
ACKR4_chr3_132592270_132607644	HG01175	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0005	PUR	AMR	ACKR4	chr3	132592270	132607644
ACLY_chr17_41861918_41923951	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0182	PUR	AMR	ACLY	chr17	41861918	41923951
ACLY_chr17_41861918_41923951	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	PUR	AMR	ACLY	chr17	41861918	41923951
ACMSD_chr2_134833616_134907034	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0339	PUR	AMR	ACMSD	chr2	134833616	134907034
ACMSD_chr2_134833616_134907034	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	PUR	AMR	ACMSD	chr2	134833616	134907034
ACO1_chr9_32379643_32459769	HG01175	hp1	a0001	a0001c0001	a0001c0001t0053	a0001c0001t0053g0313	PUR	AMR	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	HG01175	hp2	a0001	a0001c0002	a0001c0002t0027	a0001c0002t0027g0309	PUR	AMR	ACO1	chr9	32379643	32459769
ACO2_chr22_41464117_41533974	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	PUR	AMR	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	HG01175	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0090	PUR	AMR	ACO2	chr22	41464117	41533974
ACOD1_chr13_76943511_76963638	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	HG01175	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0003	PUR	AMR	ACOD1	chr13	76943511	76963638
ACOT11_chr1_54543228_54615329	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0223	PUR	AMR	ACOT11	chr1	54543228	54615329
ACOT11_chr1_54543228_54615329	HG01175	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0386	PUR	AMR	ACOT11	chr1	54543228	54615329
ACOT12_chr5_81324996_81399134	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	PUR	AMR	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	HG01175	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0058	PUR	AMR	ACOT12	chr5	81324996	81399134
ACOT13_chr6_24662077_24710046	HG01175	hp1	a0001	a0001c0001	a0001c0001t0027	a0001c0001t0027g0102	PUR	AMR	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	HG01175	hp2	a0001	a0001c0001	a0001c0001t0034	a0001c0001t0034g0100	PUR	AMR	ACOT13	chr6	24662077	24710046
ACOT2_chr14_73564213_73580655	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACOT2	chr14	73564213	73580655
ACOT2_chr14_73564213_73580655	HG01175	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0004	PUR	AMR	ACOT2	chr14	73564213	73580655
ACOT4_chr14_73586873_73600766	HG01175	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0003	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT4_chr14_73586873_73600766	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	PUR	AMR	ACOT4	chr14	73586873	73600766
ACOT6_chr14_73607517_73624888	HG01175	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0005	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT6_chr14_73607517_73624888	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	PUR	AMR	ACOT6	chr14	73607517	73624888
ACOT7_chr1_6259272_6398767	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	PUR	AMR	ACOT7	chr1	6259272	6398767
ACOT7_chr1_6259272_6398767	HG01175	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0225	PUR	AMR	ACOT7	chr1	6259272	6398767
ACOT8_chr20_45836721_45862392	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOT8_chr20_45836721_45862392	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	PUR	AMR	ACOT8	chr20	45836721	45862392
ACOX1_chr17_75936507_75984166	HG01175	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0156	PUR	AMR	ACOX1	chr17	75936507	75984166
ACOX1_chr17_75936507_75984166	HG01175	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0054	PUR	AMR	ACOX1	chr17	75936507	75984166
ACOX2_chr3_58500136_58542190	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0238	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX2_chr3_58500136_58542190	HG01175	hp2	a0007	a0007c0018	a0007c0018t0001	a0007c0018t0001g0236	PUR	AMR	ACOX2	chr3	58500136	58542190
ACOX3_chr4_8361282_8445723	HG01175	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0098	PUR	AMR	ACOX3	chr4	8361282	8445723
ACOX3_chr4_8361282_8445723	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	PUR	AMR	ACOX3	chr4	8361282	8445723
ACOXL_chr2_110727573_111123548	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	PUR	AMR	ACOXL	chr2	110727573	111123548
ACOXL_chr2_110727573_111123548	HG01175	hp2	a0005	a0005c0007	a0005c0007t0002	a0005c0007t0002g0050	PUR	AMR	ACOXL	chr2	110727573	111123548
ACP1_chr2_259947_283283	HG01175	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0051	PUR	AMR	ACP1	chr2	259947	283283
ACP1_chr2_259947_283283	HG01175	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	PUR	AMR	ACP1	chr2	259947	283283
ACP2_chr11_47234302_47253814	HG01175	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	ACP2	chr11	47234302	47253814
ACP2_chr11_47234302_47253814	HG01175	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	ACP2	chr11	47234302	47253814
ACP3_chr3_132312407_132363841	HG01175	hp1	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0228	PUR	AMR	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	HG01175	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0051	PUR	AMR	ACP3	chr3	132312407	132363841
ACP4_chr19_50785415_50800219	HG01175	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0003	PUR	AMR	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	HG01175	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0009	PUR	AMR	ACP4	chr19	50785415	50800219
ACP5_chr19_11569660_11582645	HG01175	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0014	PUR	AMR	ACP5	chr19	11569660	11582645
ACP5_chr19_11569660_11582645	HG01175	hp2	a0010	a0010c0016	a0010c0016t0001	a0010c0016t0001g0084	PUR	AMR	ACP5	chr19	11569660	11582645
ACP6_chr1_147637230_147675524	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	PUR	AMR	ACP6	chr1	147637230	147675524
ACP6_chr1_147637230_147675524	HG01175	hp2	a0006	a0006c0012	a0006c0012t0002	a0006c0012t0002g0116	PUR	AMR	ACP6	chr1	147637230	147675524