JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACTL6B_chr7_100638097_100661448	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	PUR	AMR	ACTL6B	chr7	100638097	100661448
ACTL6B_chr7_100638097_100661448	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	PUR	AMR	ACTL6B	chr7	100638097	100661448
ACTL7A_chr9_108857266_108868756	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	PUR	AMR	ACTL7A	chr9	108857266	108868756
ACTL7A_chr9_108857266_108868756	HG01175	hp2	a0006	a0006c0008	a0006c0008t0001	a0006c0008t0001g0000	PUR	AMR	ACTL7A	chr9	108857266	108868756
ACTL7B_chr9_108849588_108860986	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	PUR	AMR	ACTL7B	chr9	108849588	108860986
ACTL7B_chr9_108849588_108860986	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	PUR	AMR	ACTL7B	chr9	108849588	108860986
ACTL9_chr19_8692400_8703795	HG01175	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0000	PUR	AMR	ACTL9	chr19	8692400	8703795
ACTL9_chr19_8692400_8703795	HG01175	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0000	PUR	AMR	ACTL9	chr19	8692400	8703795
ACTMAP_chr19_40735861_40755477	HG01175	hp1	a0001	a0001c0004	a0001c0004t0012	a0001c0004t0012g0057	PUR	AMR	ACTMAP	chr19	40735861	40755477
ACTMAP_chr19_40735861_40755477	HG01175	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0115	PUR	AMR	ACTMAP	chr19	40735861	40755477
ACTN1_chr14_68869128_68984302	HG01175	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0115	PUR	AMR	ACTN1	chr14	68869128	68984302
ACTN1_chr14_68869128_68984302	HG01175	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0106	PUR	AMR	ACTN1	chr14	68869128	68984302
ACTN2_chr1_236681499_236769631	HG01175	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0279	PUR	AMR	ACTN2	chr1	236681499	236769631
ACTN2_chr1_236681499_236769631	HG01175	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0247	PUR	AMR	ACTN2	chr1	236681499	236769631
ACTN3_chr11_66541903_66568334	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	ACTN3	chr11	66541903	66568334
ACTN3_chr11_66541903_66568334	HG01175	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0104	PUR	AMR	ACTN3	chr11	66541903	66568334
ACTN4_chr19_38642649_38736589	HG01175	hp1	a0001	a0001c0005	a0001c0005t0027	a0001c0005t0027g0306	PUR	AMR	ACTN4	chr19	38642649	38736589
ACTN4_chr19_38642649_38736589	HG01175	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0025	PUR	AMR	ACTN4	chr19	38642649	38736589
ACTR1A_chr10_102474229_102507712	HG01175	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0246	PUR	AMR	ACTR1A	chr10	102474229	102507712
ACTR1A_chr10_102474229_102507712	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	PUR	AMR	ACTR1A	chr10	102474229	102507712
ACTR1B_chr2_97650939_97669044	HG01175	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0013	PUR	AMR	ACTR1B	chr2	97650939	97669044
ACTR1B_chr2_97650939_97669044	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACTR1B	chr2	97650939	97669044
ACTR3B_chr7_152754752_152860378	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	PUR	AMR	ACTR3B	chr7	152754752	152860378
ACTR3B_chr7_152754752_152860378	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	PUR	AMR	ACTR3B	chr7	152754752	152860378
ACTR5_chr20_38743460_38777520	HG01175	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0002	PUR	AMR	ACTR5	chr20	38743460	38777520
ACTR5_chr20_38743460_38777520	HG01175	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	PUR	AMR	ACTR5	chr20	38743460	38777520
ACTR8_chr3_53862066_53887152	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACTR8	chr3	53862066	53887152
ACTR8_chr3_53862066_53887152	HG01175	hp2	a0002	a0002c0003	a0002c0003t0002	a0002c0003t0002g0005	PUR	AMR	ACTR8	chr3	53862066	53887152
ACTRT1_chrX_128045962_128057403	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	PUR	AMR	ACTRT1	chrX	128045962	128057403
ACTRT1_chrX_128045962_128057403	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	PUR	AMR	ACTRT1	chrX	128045962	128057403
ACTRT2_chr1_3016467_3027903	HG01175	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0000	PUR	AMR	ACTRT2	chr1	3016467	3027903
ACTRT2_chr1_3016467_3027903	HG01175	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0000	PUR	AMR	ACTRT2	chr1	3016467	3027903
ACTRT3_chr3_169761921_169774561	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	ACTRT3	chr3	169761921	169774561
ACTRT3_chr3_169761921_169774561	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACTRT3	chr3	169761921	169774561
ACVR1B_chr12_51946699_52002078	HG01175	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0103	PUR	AMR	ACVR1B	chr12	51946699	52002078
ACVR1B_chr12_51946699_52002078	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	PUR	AMR	ACVR1B	chr12	51946699	52002078
ACVR2A_chr2_147840029_147935822	HG01175	hp1	a0001	a0001c0002	a0001c0002t0010	a0001c0002t0010g0048	PUR	AMR	ACVR2A	chr2	147840029	147935822
ACVR2A_chr2_147840029_147935822	HG01175	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0171	PUR	AMR	ACVR2A	chr2	147840029	147935822
ACVR2B_chr3_38448890_38498142	HG01175	hp1	a0001	a0001c0001	a0001c0001t0030	a0001c0001t0030g0068	PUR	AMR	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	HG01175	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	PUR	AMR	ACVR2B	chr3	38448890	38498142
ACVRL1_chr12_51902504_51928361	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	PUR	AMR	ACVRL1	chr12	51902504	51928361
ACVRL1_chr12_51902504_51928361	HG01175	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0078	PUR	AMR	ACVRL1	chr12	51902504	51928361
ACY1_chr3_51978535_51994197	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACY1	chr3	51978535	51994197
ACY1_chr3_51978535_51994197	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACY1	chr3	51978535	51994197
ACY3_chr11_67637555_67655730	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PUR	AMR	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ACY3	chr11	67637555	67655730
ACYP1_chr14_75048243_75069024	HG01175	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	ACYP1	chr14	75048243	75069024
ACYP1_chr14_75048243_75069024	HG01175	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	ACYP1	chr14	75048243	75069024
ACYP2_chr2_53966113_54310300	HG01175	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0225	PUR	AMR	ACYP2	chr2	53966113	54310300
ACYP2_chr2_53966113_54310300	HG01175	hp2	a0002	a0002c0003	a0002c0003t0002	a0002c0003t0002g0031	PUR	AMR	ACYP2	chr2	53966113	54310300