JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
FGFBP1_chr4_15930577_15943740	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	ACB	AFR	FGFBP1	chr4	15930577	15943740
FGFBP1_chr4_15930577_15943740	HG01884	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0006	ACB	AFR	FGFBP1	chr4	15930577	15943740
FGFBP2_chr4_15955245_15968175	HG01884	hp1	a0002	a0002c0001	a0002c0001t0001	a0002c0001t0001g0039	ACB	AFR	FGFBP2	chr4	15955245	15968175
FGFBP2_chr4_15955245_15968175	HG01884	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0004	ACB	AFR	FGFBP2	chr4	15955245	15968175
FGFBP3_chr10_91901584_91914486	HG01884	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0005	ACB	AFR	FGFBP3	chr10	91901584	91914486
FGFBP3_chr10_91901584_91914486	HG01884	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0005	ACB	AFR	FGFBP3	chr10	91901584	91914486
FGFR2_chr10_121473332_121603444	HG01884	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0135	ACB	AFR	FGFR2	chr10	121473332	121603444
FGFR2_chr10_121473332_121603444	HG01884	hp2	a0001	a0001c0002	a0001c0002t0013	a0001c0002t0013g0217	ACB	AFR	FGFR2	chr10	121473332	121603444
FGFR3_chr4_1788293_1813867	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	ACB	AFR	FGFR3	chr4	1788293	1813867
FGFR3_chr4_1788293_1813867	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	ACB	AFR	FGFR3	chr4	1788293	1813867
FGFR4_chr5_177081915_177103144	HG01884	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0088	ACB	AFR	FGFR4	chr5	177081915	177103144
FGFR4_chr5_177081915_177103144	HG01884	hp2	a0003	a0003c0005	a0003c0005t0002	a0003c0005t0002g0178	ACB	AFR	FGFR4	chr5	177081915	177103144
FGFRL1_chr4_1006626_1031898	HG01884	hp1	a0001	a0001c0002	a0001c0002t0016	a0001c0002t0016g0108	ACB	AFR	FGFRL1	chr4	1006626	1031898
FGFRL1_chr4_1006626_1031898	HG01884	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0007	ACB	AFR	FGFRL1	chr4	1006626	1031898
FGG_chr4_154599171_154617656	HG01884	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0005	ACB	AFR	FGG	chr4	154599171	154617656
FGG_chr4_154599171_154617656	HG01884	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	ACB	AFR	FGG	chr4	154599171	154617656
FGL1_chr8_17859389_17900524	HG01884	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0002	ACB	AFR	FGL1	chr8	17859389	17900524
FGL1_chr8_17859389_17900524	HG01884	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0045	ACB	AFR	FGL1	chr8	17859389	17900524
FGL2_chr7_77188369_77204819	HG01884	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0006	ACB	AFR	FGL2	chr7	77188369	77204819
FGL2_chr7_77188369_77204819	HG01884	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0008	ACB	AFR	FGL2	chr7	77188369	77204819
FGR_chr1_27607064_27640185	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	ACB	AFR	FGR	chr1	27607064	27640185
FGR_chr1_27607064_27640185	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	ACB	AFR	FGR	chr1	27607064	27640185
FHAD1_chr1_15242223_15403328	HG01884	hp1	a0024	a0024c0027	a0024c0027t0024	a0024c0027t0024g0288	ACB	AFR	FHAD1	chr1	15242223	15403328
FHAD1_chr1_15242223_15403328	HG01884	hp2	a0004	a0004c0038	a0004c0038t0007	a0004c0038t0007g0143	ACB	AFR	FHAD1	chr1	15242223	15403328
FHDC1_chr4_152931323_152984671	HG01884	hp1	a0002	a0002c0001	a0002c0001t0001	a0002c0001t0001g0165	ACB	AFR	FHDC1	chr4	152931323	152984671
FHDC1_chr4_152931323_152984671	HG01884	hp2	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0337	ACB	AFR	FHDC1	chr4	152931323	152984671
FHIP1A_chr4_151404176_151675503	HG01884	hp1	a0003	a0003c0003	a0003c0003t0015	a0003c0003t0015g0013	ACB	AFR	FHIP1A	chr4	151404176	151675503
FHIP1A_chr4_151404176_151675503	HG01884	hp2	a0001	a0001c0001	a0001c0001t0022	a0001c0001t0022g0025	ACB	AFR	FHIP1A	chr4	151404176	151675503
FHIP1B_chr11_6206345_6239636	HG01884	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0003	ACB	AFR	FHIP1B	chr11	6206345	6239636
FHIP1B_chr11_6206345_6239636	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	FHIP1B	chr11	6206345	6239636
FHIP2B_chr8_22084150_22109911	HG01884	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	ACB	AFR	FHIP2B	chr8	22084150	22109911
FHIP2B_chr8_22084150_22109911	HG01884	hp2	a0004	a0004c0006	a0004c0006t0005	a0004c0006t0005g0002	ACB	AFR	FHIP2B	chr8	22084150	22109911
FHL1_chrX_136142533_136216354	HG01884	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0175	ACB	AFR	FHL1	chrX	136142533	136216354
FHL1_chrX_136142533_136216354	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	ACB	AFR	FHL1	chrX	136142533	136216354
FHL1_chrX_136192047_136216354	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	FHL1	chrX	136192047	136216354
FHL1_chrX_136192047_136216354	HG01884	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	ACB	AFR	FHL1	chrX	136192047	136216354
FHL3_chr1_37991770_38010514	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	ACB	AFR	FHL3	chr1	37991770	38010514
FHL3_chr1_37991770_38010514	HG01884	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0033	ACB	AFR	FHL3	chr1	37991770	38010514
FHL5_chr6_96558128_96623626	HG01884	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0247	ACB	AFR	FHL5	chr6	96558128	96623626
FHL5_chr6_96558128_96623626	HG01884	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0321	ACB	AFR	FHL5	chr6	96558128	96623626
FHOD3_chr18_36292713_36785220	HG01884	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0084	ACB	AFR	FHOD3	chr18	36292713	36785220
FHOD3_chr18_36292713_36785220	HG01884	hp2	a0003	a0003c0005	a0003c0005t0001	a0003c0005t0001g0067	ACB	AFR	FHOD3	chr18	36292713	36785220
FH_chr1_241492603_241524755	HG01884	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0026	ACB	AFR	FH	chr1	241492603	241524755
FH_chr1_241492603_241524755	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0144	ACB	AFR	FH	chr1	241492603	241524755
FIBCD1_chr9_130897440_130944247	HG01884	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0275	ACB	AFR	FIBCD1	chr9	130897440	130944247
FIBCD1_chr9_130897440_130944247	HG01884	hp2	a0006	a0006c0007	a0006c0007t0016	a0006c0007t0016g0240	ACB	AFR	FIBCD1	chr9	130897440	130944247
FIBIN_chr11_26989112_27002087	HG01884	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0000	ACB	AFR	FIBIN	chr11	26989112	27002087
FIBIN_chr11_26989112_27002087	HG01884	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0000	ACB	AFR	FIBIN	chr11	26989112	27002087
FIBP_chr11_65878740_65893471	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	ACB	AFR	FIBP	chr11	65878740	65893471
FIBP_chr11_65878740_65893471	HG01884	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0018	ACB	AFR	FIBP	chr11	65878740	65893471