JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ACBD7_chr10_15070475_15093776	HG01884	hp1	a0001	a0001c0001	a0001c0001t0041	a0001c0001t0041g0111	ACB	AFR	ACBD7	chr10	15070475	15093776
ACBD7_chr10_15070475_15093776	HG01884	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0011	ACB	AFR	ACBD7	chr10	15070475	15093776
ACCSL_chr11_44042981_44064977	HG01884	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0014	ACB	AFR	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	ACB	AFR	ACCSL	chr11	44042981	44064977
ACCS_chr11_44061270_44089237	HG01884	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0028	ACB	AFR	ACCS	chr11	44061270	44089237
ACCS_chr11_44061270_44089237	HG01884	hp2	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0097	ACB	AFR	ACCS	chr11	44061270	44089237
ACD_chr16_67652512_67665260	HG01884	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0008	ACB	AFR	ACD	chr16	67652512	67665260
ACD_chr16_67652512_67665260	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	ACB	AFR	ACD	chr16	67652512	67665260
ACE2_chrX_15556033_15605960	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	ACB	AFR	ACE2	chrX	15556033	15605960
ACE2_chrX_15556033_15605960	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	ACB	AFR	ACE2	chrX	15556033	15605960
ACER1_chr19_6301142_6338612	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	ACB	AFR	ACER1	chr19	6301142	6338612
ACER1_chr19_6301142_6338612	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0342	ACB	AFR	ACER1	chr19	6301142	6338612
ACER2_chr9_19404009_19457505	HG01884	hp1	a0001	a0001c0003	a0001c0003t0005	a0001c0003t0005g0107	ACB	AFR	ACER2	chr9	19404009	19457505
ACER2_chr9_19404009_19457505	HG01884	hp2	a0001	a0001c0003	a0001c0003t0005	a0001c0003t0005g0080	ACB	AFR	ACER2	chr9	19404009	19457505
ACER3_chr11_76855918_77031797	HG01884	hp1	a0001	a0001c0003	a0001c0003t0135	a0001c0003t0135g0344	ACB	AFR	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	HG01884	hp2	a0001	a0001c0003	a0001c0003t0027	a0001c0003t0027g0119	ACB	AFR	ACER3	chr11	76855918	77031797
ACE_chr17_63472061_63503373	HG01884	hp1	a0008	a0008c0014	a0008c0014t0009	a0008c0014t0009g0025	ACB	AFR	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	HG01884	hp2	a0009	a0009c0019	a0009c0019t0001	a0009c0019t0001g0020	ACB	AFR	ACE	chr17	63472061	63503373
ACHE_chr7_100884994_100900888	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	ACB	AFR	ACHE	chr7	100884994	100900888
ACHE_chr7_100884994_100900888	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	ACB	AFR	ACHE	chr7	100884994	100900888
ACIN1_chr14_23053564_23100136	HG01884	hp1	a0006	a0006c0009	a0006c0009t0001	a0006c0009t0001g0198	ACB	AFR	ACIN1	chr14	23053564	23100136
ACIN1_chr14_23053564_23100136	HG01884	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0055	ACB	AFR	ACIN1	chr14	23053564	23100136
ACKR1_chr1_159199875_159211500	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	ACB	AFR	ACKR1	chr1	159199875	159211500
ACKR1_chr1_159199875_159211500	HG01884	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	ACB	AFR	ACKR1	chr1	159199875	159211500
ACKR3_chr2_236564825_236587354	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	ACB	AFR	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	HG01884	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0109	ACB	AFR	ACKR3	chr2	236564825	236587354
ACKR4_chr3_132592270_132607644	HG01884	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0001	ACB	AFR	ACKR4	chr3	132592270	132607644
ACKR4_chr3_132592270_132607644	HG01884	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0004	ACB	AFR	ACKR4	chr3	132592270	132607644
ACLY_chr17_41861918_41923951	HG01884	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	ACB	AFR	ACLY	chr17	41861918	41923951
ACLY_chr17_41861918_41923951	HG01884	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0252	ACB	AFR	ACLY	chr17	41861918	41923951
ACO2_chr22_41464117_41533974	HG01884	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0152	ACB	AFR	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	HG01884	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0138	ACB	AFR	ACO2	chr22	41464117	41533974
ACOD1_chr13_76943511_76963638	HG01884	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0012	ACB	AFR	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	ACB	AFR	ACOD1	chr13	76943511	76963638
ACOT12_chr5_81324996_81399134	HG01884	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0180	ACB	AFR	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	HG01884	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0019	ACB	AFR	ACOT12	chr5	81324996	81399134
ACOT13_chr6_24662077_24710046	HG01884	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0137	ACB	AFR	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	HG01884	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0085	ACB	AFR	ACOT13	chr6	24662077	24710046
ACOT1_chr14_73532143_73548796	HG01884	hp1	a0008	a0008c0011	a0008c0011t0001	a0008c0011t0001g0033	ACB	AFR	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	HG01884	hp2	a0003	a0003c0005	a0003c0005t0005	a0003c0005t0005g0008	ACB	AFR	ACOT1	chr14	73532143	73548796
ACOT2_chr14_73564213_73580655	HG01884	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0009	ACB	AFR	ACOT2	chr14	73564213	73580655
ACOT2_chr14_73564213_73580655	HG01884	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0016	ACB	AFR	ACOT2	chr14	73564213	73580655
ACOT4_chr14_73586873_73600766	HG01884	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	ACB	AFR	ACOT4	chr14	73586873	73600766
ACOT4_chr14_73586873_73600766	HG01884	hp2	a0007	a0007c0014	a0007c0014t0001	a0007c0014t0001g0049	ACB	AFR	ACOT4	chr14	73586873	73600766
ACOT6_chr14_73607517_73624888	HG01884	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0047	ACB	AFR	ACOT6	chr14	73607517	73624888
ACOT6_chr14_73607517_73624888	HG01884	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0019	ACB	AFR	ACOT6	chr14	73607517	73624888
ACOT7_chr1_6259272_6398767	HG01884	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0231	ACB	AFR	ACOT7	chr1	6259272	6398767
ACOT7_chr1_6259272_6398767	HG01884	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0139	ACB	AFR	ACOT7	chr1	6259272	6398767
ACOT8_chr20_45836721_45862392	HG01884	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	ACB	AFR	ACOT8	chr20	45836721	45862392
ACOT8_chr20_45836721_45862392	HG01884	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	ACB	AFR	ACOT8	chr20	45836721	45862392