| geneid | 29974 |
|---|---|
| ensemblid | ENSG00000148584.16 |
| hgncid | 24086 |
| symbol | A1CF |
| name | APOBEC1 complementation factor |
| refseq_nuc | NM_014576.4 |
| refseq_prot | NP_055391.2 |
| ensembl_nuc | ENST00000373997.8 |
| ensembl_prot | ENSP00000363109.3 |
| mane_status | MANE Select |
| chr | chr10 |
| start | 50799409 |
| end | 50885627 |
| strand | - |
| ver | v1.2 |
| region | chr10:50799409-50885627 |
| region5000 | chr10:50794409-50890627 |
| regionname0 | A1CF_chr10_50799409_50885627 |
| regionname5000 | A1CF_chr10_50794409_50890627 |
| chr:pos | ref | alt | af | annotation | impact | samples | AHAPIDS | ACHAPIDS | ACTHAPIDS | ACTGHAPIDS | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|
| chr:pos | ref | alt | af | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|
| chr:pos | ref | alt | af | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:50800083
|
T | G | 0.8491 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*6646A>C | 6646 | |||||
|
chr10:50800699
|
G | A | 0.9970 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(55): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(283): Show | 337 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*6030C>T | 6030 | |||||
|
chr10:50800797
|
G | A | 0.8491 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*5932C>T | 5932 | |||||
|
chr10:50802069
|
C | A | 0.8491 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*4660G>T | 4660 | |||||
|
chr10:50804022
|
G | A | 0.0118 | 3_prime_UTR_variant | MODIFIER | HG01884.hp2 HG02572.hp1 HG02630.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159 | 4 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*2707C>T | 2707 | |||||
|
chr10:50806119
|
G | C | 0.0148 | 3_prime_UTR_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02572.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0043 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(1): Show | 5 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*610C>G | 610 |
| chr:pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:50807215
|
G | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(300): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(255): Show | 303 | 338 | 0.8965 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 12/12 | c.1610-335C>A | ||||||
|
chr10:50808105
|
A | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(286): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(44): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(243): Show | 289 | 338 | 0.8550 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 12/12 | c.1610-1225T>C | ||||||
|
chr10:50808856
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0.8491 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 12/12 | c.1609+1038A>G | ||||||
|
chr10:50809332
|
C | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02559.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0015a0001c0001t0043 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(3): Show | 7 | 338 | 0.0207 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 12/12 | c.1609+562G>T | ||||||
|
chr10:50811287
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(55): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(283): Show | 337 | 338 | 0.9970 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-111G>A | ||||||
|
chr10:50811600
|
C | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02559.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0015a0001c0001t0043 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(3): Show | 7 | 338 | 0.0207 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-424G>A | ||||||
|
chr10:50811742
|
C | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(300): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(255): Show | 303 | 338 | 0.8965 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-566G>C | ||||||
|
chr10:50811969
|
T | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02559.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0015a0001c0001t0043 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(3): Show | 7 | 338 | 0.0207 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-793A>G | ||||||
|
chr10:50813499
|
C | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02145.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0015a0001c0001t0016others(1): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(5): Show | 9 | 338 | 0.0266 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1323+358G>T | ||||||
|
chr10:50814208
|
C | T | intron_variant | MODIFIER | HG01884.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0158 | 1 | 338 | 0.0030 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 9/12 | c.1142-170G>A | ||||||
|
chr10:50816308
|
G | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(289): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(244): Show | 292 | 338 | 0.8639 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.868-29C>T | ||||||
|
chr10:50818518
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(324): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(274): Show | 327 | 338 | 0.9675 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.867+2034G>A | ||||||
|
chr10:50819835
|
T | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(1): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(4): Show | 8 | 338 | 0.0237 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.867+717A>G | ||||||
|
chr10:50819943
|
C | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0041others(2): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(6): Show | 10 | 338 | 0.0296 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.867+609G>T | ||||||
|
chr10:50820797
|
A | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0041others(2): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(6): Show | 10 | 338 | 0.0296 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.770-148T>C | ||||||
|
chr10:50821359
|
C | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0041others(2): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(6): Show | 10 | 338 | 0.0296 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.770-710G>A | ||||||
|
chr10:50821541
|
A | AT | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(146): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0003a0001c0001t0001g0020a0001c0001t0001g0021others(127): Show | 149 | 338 | 0.4408 | 1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.770-893dupA | ||||||
|
chr10:50821807
|
G | C | intron_variant | MODIFIER | HG01884.hp2 HG02055.hp1 HG02572.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0002t0004 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(1): Show | 5 | 338 | 0.0148 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.770-1158C>G | ||||||
|
chr10:50823534
|
G | C | intron_variant | MODIFIER | HG01243.hp1 HG01884.hp2 HG01891.hp2 others(21): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(10): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(18): Show | 24 | 338 | 0.0710 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.770-2885C>G | ||||||
|
chr10:50825453
|
G | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0043a0001c0002t0004 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(2): Show | 6 | 338 | 0.0178 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.769+2678C>T | ||||||
|
chr10:50826533
|
G | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(1): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(4): Show | 8 | 338 | 0.0237 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.769+1598C>G | ||||||
|
chr10:50826860
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(327): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(49): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(276): Show | 330 | 338 | 0.9763 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.769+1271A>G | ||||||
|
chr10:50827485
|
C | A | intron_variant | MODIFIER | HG01069.hp2 HG01884.hp2 HG01891.hp2 others(21): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(3): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(11): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(18): Show | 24 | 338 | 0.0710 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.769+646G>T | ||||||
|
chr10:50827932
|
A | G | intron_variant | MODIFIER | HG01069.hp2 HG01884.hp2 HG01891.hp2 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0009a0001c0001t0015a0001c0001t0028others(5): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(9): Show | 13 | 338 | 0.0385 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.769+199T>C | ||||||
|
chr10:50829091
|
A | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(1): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(4): Show | 8 | 338 | 0.0237 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.605-796T>C | ||||||
|
chr10:50829836
|
G | A | intron_variant | MODIFIER | HG01069.hp2 HG01884.hp2 HG01891.hp2 others(21): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(3): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(11): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(18): Show | 24 | 338 | 0.0710 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.605-1541C>T | ||||||
|
chr10:50830370
|
G | A | intron_variant | MODIFIER | HG01884.hp2 HG02055.hp1 HG02572.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0002t0004 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(1): Show | 5 | 338 | 0.0148 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.605-2075C>T | ||||||
|
chr10:50831467
|
A | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(19): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(9): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(16): Show | 22 | 338 | 0.0651 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.605-3172T>C | ||||||
|
chr10:50831940
|
T | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(18): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(8): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(15): Show | 21 | 338 | 0.0621 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.605-3645A>G | ||||||
|
chr10:50832253
|
G | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(1): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(4): Show | 8 | 338 | 0.0237 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.604+3821C>T | ||||||
|
chr10:50832867
|
GT | G | intron_variant | MODIFIER | HG01069.hp2 HG01884.hp2 HG01891.hp2 others(16): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0003a0001c0001t0008a0001c0001t0009others(7): Show | a0001c0001t0003g0014a0001c0001t0008g0006a0001c0001t0008g0098others(12): Show | 19 | 338 | 0.0562 | -1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.604+3206delA | ||||||
|
chr10:50835133
|
A | G | intron_variant | MODIFIER | HG01884.hp2 NA19043.hp1 |
a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0158a0001c0001t0009g0159 | 2 | 338 | 0.0059 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.604+941T>C | ||||||
|
chr10:50835988
|
CA | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(19): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(9): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(16): Show | 22 | 338 | 0.0651 | -1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.604+85delT | ||||||
|
chr10:50836380
|
G | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0041others(2): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(6): Show | 10 | 338 | 0.0296 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 5/12 | c.366-68C>G | ||||||
|
chr10:50837415
|
C | T | intron_variant | MODIFIER | HG01884.hp2 HG02055.hp1 HG02572.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0002t0004 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(1): Show | 5 | 338 | 0.0148 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 5/12 | c.366-1103G>A | ||||||
|
chr10:50837475
|
C | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0041others(2): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(6): Show | 10 | 338 | 0.0296 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 5/12 | c.366-1163G>T | ||||||
|
chr10:50838036
|
A | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(1): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(4): Show | 8 | 338 | 0.0237 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 5/12 | c.366-1724T>C | ||||||
|
chr10:50839852
|
A | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 5/12 | c.365+2010T>C | ||||||
|
chr10:50840035
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(328): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(277): Show | 331 | 338 | 0.9793 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 5/12 | c.365+1827A>G | ||||||
|
chr10:50843367
|
T | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(4): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(9): Show | 13 | 338 | 0.0385 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 4/12 | c.234+621A>T | ||||||
|
chr10:50844185
|
C | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-63G>A | ||||||
|
chr10:50844362
|
AAT | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(4): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(9): Show | 13 | 338 | 0.0385 | -2 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-242_100-241delAT | ||||||
|
chr10:50844563
|
A | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(332): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(281): Show | 335 | 338 | 0.9911 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-441T>G | ||||||
|
chr10:50845326
|
C | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(4): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(9): Show | 13 | 338 | 0.0385 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-1204G>T | ||||||
|
chr10:50846097
|
C | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(15): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(6): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(12): Show | 18 | 338 | 0.0533 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-1975G>T | ||||||
|
chr10:50848012
|
C | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-3890G>A | ||||||
|
chr10:50849438
|
G | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(4): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(9): Show | 13 | 338 | 0.0385 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-5316C>T | ||||||
|
chr10:50849889
|
C | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-5767G>C | ||||||
|
chr10:50850592
|
T | TTG | intron_variant | MODIFIER | HG00438.hp1 HG00639.hp1 HG00735.hp2 others(69): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(15): Show | a0001c0001t0001g0276a0001c0001t0003g0018a0001c0001t0003g0033others(57): Show | 72 | 338 | 0.2130 | 2 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-6472_100-6471dupCA | ||||||
|
chr10:50851610
|
GTC | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(4): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(9): Show | 13 | 338 | 0.0385 | -2 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-7490_100-7489delGA | ||||||
|
chr10:50853042
|
G | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0043a0001c0002t0004 | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(2): Show | 6 | 338 | 0.0178 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+6800C>T | ||||||
|
chr10:50853275
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(332): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(281): Show | 335 | 338 | 0.9911 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+6567G>A | ||||||
|
chr10:50853750
|
ATT | A | intron_variant | MODIFIER | HG00423.hp1 HG01884.hp2 HG01891.hp2 others(16): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0003a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0003g0059a0001c0001t0003g0060a0001c0001t0003g0061others(15): Show | 19 | 338 | 0.0562 | -2 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+6090_99+6091delAA | ||||||
|
chr10:50853803
|
T | TA | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(9): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(4): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(8): Show | 12 | 338 | 0.0355 | 1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+6038dupT | ||||||
|
chr10:50855911
|
C | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(15): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(6): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(12): Show | 18 | 338 | 0.0533 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+3931G>C | ||||||
|
chr10:50857778
|
T | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+2064A>G | ||||||
|
chr10:50858310
|
TG | T | intron_variant | MODIFIER | HG01069.hp2 HG01884.hp2 HG01891.hp2 others(22): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(3): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(12): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(19): Show | 25 | 338 | 0.0740 | -1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+1531delC | ||||||
|
chr10:50860192
|
C | CA | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(14): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0003a0001c0001t0009a0001c0001t0015others(6): Show | a0001c0001t0003g0259a0001c0001t0003g0260a0001c0001t0003g0261others(13): Show | 17 | 338 | 0.0503 | 1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 2/12 | c.-45-208dupT | ||||||
|
chr10:50860705
|
G | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(315): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(265): Show | 318 | 338 | 0.9408 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 2/12 | c.-45-720C>T | ||||||
|
chr10:50861784
|
A | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(8): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 2/12 | c.-45-1799T>C | ||||||
|
chr10:50861856
|
A | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(325): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(274): Show | 328 | 338 | 0.9704 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 2/12 | c.-45-1871T>C | ||||||
|
chr10:50863673
|
A | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(12): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0009a0001c0001t0015a0001c0001t0043others(6): Show | a0001c0001t0009g0026a0001c0001t0009g0158a0001c0001t0009g0159others(11): Show | 15 | 338 | 0.0444 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 2/12 | c.-46+360T>C | ||||||
|
chr10:50865296
|
TTAC | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(19): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(9): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(16): Show | 22 | 338 | 0.0651 | -3 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-1219_-93-1217delGTA | ||||||
|
chr10:50865388
|
G | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(8): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-1308C>A | ||||||
|
chr10:50866079
|
T | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(20): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(3): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(10): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(17): Show | 23 | 338 | 0.0681 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-1999A>G | ||||||
|
chr10:50867016
|
GT | G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(16): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0003a0001c0001t0008a0001c0001t0009others(7): Show | a0001c0001t0003g0286a0001c0001t0008g0006a0001c0001t0008g0098others(13): Show | 19 | 338 | 0.0562 | -1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-2937delA | ||||||
|
chr10:50868506
|
A | C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-4426T>G | ||||||
|
chr10:50868801
|
A | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(19): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(9): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(16): Show | 22 | 338 | 0.0651 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-4721T>A | ||||||
|
chr10:50870968
|
T | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(328): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(277): Show | 331 | 338 | 0.9793 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-6888A>T | ||||||
|
chr10:50871981
|
A | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(332): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(281): Show | 335 | 338 | 0.9911 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-7901T>A | ||||||
|
chr10:50872128
|
C | CTT | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG01981.hp2 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0015others(7): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(14): Show | 20 | 338 | 0.0592 | 2 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-8049_-93-8048insAA | ||||||
|
chr10:50872946
|
CTTTTTTT others(4): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02055.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0008a0001c0001t0009a0001c0001t0043others(1): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(4): Show | 10 | 338 | 0.0296 | -11 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-8877_-93-8867delAAAAAAAAAAA | ||||||
|
chr10:50873231
|
T | C | intron_variant | MODIFIER | HG01192.hp1 HG01884.hp2 HG01891.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0008a0001c0001t0009a0001c0001t0010others(2): Show | a0001c0001t0008g0006a0001c0001t0008g0098a0001c0001t0009g0026others(5): Show | 11 | 338 | 0.0325 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-9151A>G | ||||||
|
chr10:50873699
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(120): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0063others(98): Show | 123 | 338 | 0.3639 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-9619G>A | ||||||
|
chr10:50874290
|
TA | T | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00735.hp1 others(45): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0011a0001c0001t0001g0063a0001c0001t0001g0064others(37): Show | 48 | 338 | 0.1420 | -1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-10211delT | ||||||
|
chr10:50879173
|
T | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(278): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(36): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020others(236): Show | 281 | 338 | 0.8314 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+6408A>C | ||||||
|
chr10:50880116
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(55): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(283): Show | 337 | 338 | 0.9970 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+5465G>A | ||||||
|
chr10:50881804
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(318): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(267): Show | 321 | 338 | 0.9497 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+3777A>G | ||||||
|
chr10:50882028
|
T | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(318): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(267): Show | 321 | 338 | 0.9497 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+3553A>C | ||||||
|
chr10:50883318
|
A | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(258): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020others(219): Show | 261 | 338 | 0.7722 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+2263T>C | ||||||
|
chr10:50883461
|
T | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(258): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020others(219): Show | 261 | 338 | 0.7722 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+2120A>G | ||||||
|
chr10:50884062
|
A | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(323): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(272): Show | 326 | 338 | 0.9645 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+1519T>C | ||||||
|
chr10:50884324
|
G | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(323): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(272): Show | 326 | 338 | 0.9645 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+1257C>T | ||||||
|
chr10:50884716
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(323): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(272): Show | 326 | 338 | 0.9645 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+865A>G |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
ahapid | alen | total | AFR | AMR | EAS | EUR | SAS | aseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 1/1 | a0001 | 586 | 325 | 77 | 49 | 145 | 12 | 40 | subcellular location copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
chapid | clen | total | AFR | AMR | EAS | EUR | SAS | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 1/1 | c0001 | 1761 | 259 | 56 | 45 | 110 | 11 | 35 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 | thapid | tlen | total | AFR | AMR | EAS | EUR | SAS | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | t0009 | 7461 | 4 | 4 | 0 | 0 | 0 | 0 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 | ghapid | total | AFR | AMR | EAS | EUR | SAS | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | g0158 | 1 | 1 | 0 | 0 | 0 | 0 | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
achapid | total | AFR | AMR | EAS | EUR | SAS | clen | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 1/1 | a0001c0001 | 259 | 56 | 45 | 110 | 11 | 35 | 1761 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
acthapid | total | AFR | AMR | EAS | EUR | SAS | tlen | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | a0001c0001t0009 | 4 | 4 | 0 | 0 | 0 | 0 | 9221 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
actghapid | total | AFR | AMR | EAS | EUR | SAS | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | a0001c0001t0009g0158 | 1 | 1 | 0 | 0 | 0 | 0 | chr10 | 50794409 | 50890627 |
Click to load Haplotype QTL data...
| pos | S. Strand |
E# Exon Number |
max | median | min | diff | type | haplotypeid | max_hap_list | min_hap_list | symbol | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50864033 | - | 2 | -0.2350 | -0.2350 | -0.2350 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50864080 | - | 2 | 0.4103 | 0.4103 | 0.4103 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50859842 | - | 3 | -0.7527 | -0.7527 | -0.7527 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50859985 | - | 3 | 0.7475 | 0.7475 | 0.7475 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50843988 | - | 4 | -0.9976 | -0.9976 | -0.9976 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50844122 | - | 4 | 0.9876 | 0.9876 | 0.9876 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50841862 | - | 5 | -0.9953 | -0.9953 | -0.9953 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50841992 | - | 5 | 0.9926 | 0.9926 | 0.9926 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50836074 | - | 6 | -0.9605 | -0.9605 | -0.9605 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50836312 | - | 6 | 0.9186 | 0.9186 | 0.9186 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50828131 | - | 7 | -0.9957 | -0.9957 | -0.9957 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50828295 | - | 7 | 0.9731 | 0.9731 | 0.9731 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50820552 | - | 8 | -0.9947 | -0.9947 | -0.9947 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50820649 | - | 8 | 0.9928 | 0.9928 | 0.9928 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50816006 | - | 9 | -0.7553 | -0.7553 | -0.7553 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50816279 | - | 9 | 0.8273 | 0.8273 | 0.8273 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50813857 | - | 10 | -0.7810 | -0.7810 | -0.7810 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50814038 | - | 10 | 0.6442 | 0.6442 | 0.6442 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50811040 | - | 11 | -0.9096 | -0.9096 | -0.9096 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50811176 | - | 11 | 0.8040 | 0.8040 | 0.8040 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50809894 | - | 12 | -0.9805 | -0.9805 | -0.9805 | 0.0000 | acceptor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50810042 | - | 12 | 0.9807 | 0.9807 | 0.9807 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50806880 | - | 13 | 0.9093 | 0.9093 | 0.9093 | 0.0000 | donor | a0001c0001t0009g0158 | HG01884.hp2 | HG01884.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| pos | annotationhgvs_chgvs_p | clinvarid | clnsig | geneinfo | mc | clndisdb | strand strand
|
ahapid ahapid_count
|
chapid chapid count
|
thapid thapid_count
|
ghapid ghapid_count
|
AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
impact | chr | ref | alt | external |
|---|
| CHR:POS | annotationhgvs_chgvs_p | disease trait-log10podds or beta | AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
study | initial sample size/replication sample size | report genes | mapped gene | strongest snp risk allele | strand strand
|
impact | chr | ref | alt |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:50808856
|
c.1609+1038A>G | Urate levels in lean individuals0.08 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0007others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0007a0001c0001t0009others(40): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0020a0001c0001t0001g0021others(239): Show | HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00423.hp1 others(282): Show |
Modulation of genetic associations with serum urat others(38): Show |
up to 5,529 European ancestry male individuals, up others(47): Show |
ASAH2B, A1CF | ASAH2B, A1CF | rs4256922-C | - | MODIFIER | chr10 | T | C |
|
chr10:50879173
|
c.-94+6408A>C | Cognitive function0.58 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0009others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0005a0001c0001t0007others(34): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020a0001c0001t0001g0021a0001c0001t0001g0022others(234): Show | HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00423.hp2 HG00438.hp1 others(276): Show |
Genome-wide association study of population-standa others(75): Show |
2,211 Sub-Saharan African ancestry individuals/ | A1CF | rs6479768-G | - | MODIFIER | chr10 | T | G | |
|
chr10:50889433
|
c.-3946A>G | Colorectal cancer0.173862 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0011others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0005a0001c0001t0007others(25): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0020a0001c0001t0001g0021others(184): Show | HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00423.hp1 HG00423.hp2 others(221): Show |
New role of fat-free mass in cancer risk linked wi others(26): Show |
4,988 European ancestry cases, 310,272 European an others(16): Show |
A1CF - MIX23P2 | rs10761587-C | - | MODIFIER | chr10 | T | C | |
|
chr10:50883318
|
c.-94+2263T>C | Glucose levels0.0136 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0007others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0005a0001c0001t0007others(35): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020a0001c0001t0001g0021a0001c0001t0001g0022others(217): Show | HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00438.hp1 HG00438.hp2 others(256): Show |
A cross-population atlas of genetic associations f others(24): Show |
314,916 European ancestry individuals, 133,336 Eas others(29): Show |
A1CF | rs7075575-G | - | MODIFIER | chr10 | A | G |