| geneid | 1244 |
|---|---|
| ensemblid | ENSG00000023839.12 |
| hgncid | 53 |
| symbol | ABCC2 |
| name | ATP binding cassette subfamily C member 2 |
| refseq_nuc | NM_000392.5 |
| refseq_prot | NP_000383.2 |
| ensembl_nuc | ENST00000647814.1 |
| ensembl_prot | ENSP00000497274.1 |
| mane_status | MANE Select |
| chr | chr10 |
| start | 99782640 |
| end | 99852594 |
| strand | + |
| ver | v1.2 |
| region | chr10:99782640-99852594 |
| region5000 | chr10:99777640-99857594 |
| regionname0 | ABCC2_chr10_99782640_99852594 |
| regionname5000 | ABCC2_chr10_99777640_99857594 |
| chr:pos | ref | alt | af | annotation | impact | samples | AHAPIDS | ACHAPIDS | ACTHAPIDS | ACTGHAPIDS | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:99784690
|
A | T | 0.9911 | missense_variant | MODERATE | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(330): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0005others(37): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(47): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(325): Show | 333 | 336 | 0 | ABCC2 | ENSG00000023839.12 | transcript | ENST00000647814.1 | protein_coding | 2/32 | c.116A>T | p.Tyr39Phe | 321/5806 | 116/4638 | 39/1545 |
| chr:pos | ref | alt | af | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:99844450
|
C | T | 0.3155 | synonymous_variant | LOW | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(103): Show |
a0001a0002a0007others(5): Show | a0001c0002a0001c0007a0001c0014others(9): Show | a0001c0002t0002a0001c0002t0003a0001c0002t0006others(13): Show | a0001c0002t0002g0032a0001c0002t0002g0035a0001c0002t0002g0037others(103): Show | 106 | 336 | 0 | ABCC2 | ENSG00000023839.12 | transcript | ENST00000647814.1 | protein_coding | 28/32 | c.3972C>T | p.Ile1324Ile | 4177/5806 | 3972/4638 | 1324/1545 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
ahapid | alen | total | AFR | AMR | EAS | EUR | SAS | aseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCC2 | 0/1 | a0001 | 1545 | 246 | 41 | 43 | 128 | 5 | 28 | subcellular location copy fasta | chr10 | 99777640 | 99857594 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
chapid | clen | total | AFR | AMR | EAS | EUR | SAS | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCC2 | 0/1 | c0002 | 4638 | 88 | 13 | 22 | 43 | 3 | 6 | copy fasta | chr10 | 99777640 | 99857594 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
achapid | total | AFR | AMR | EAS | EUR | SAS | clen | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCC2 | 0/1 | a0001c0002 | 88 | 13 | 22 | 43 | 3 | 6 | 4638 | copy fasta | chr10 | 99777640 | 99857594 |
Click to load Haplotype QTL data...
| pos | S. Strand |
E# Exon Number |
max | median | min | diff | type | haplotypeid | max_hap_list | min_hap_list | symbol | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99782877 | + | 1 | -0.4565 | -0.4424 | -0.4079 | 0.0486 | acceptor | a0001c0002 | NA18992.hp1 | HG00642.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99784608 | + | 2 | 0.5935 | 0.5461 | 0.5320 | 0.0615 | donor | a0001c0002 | HG00642.hp2 HG01496.hp1 |
HG03139.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99784781 | + | 2 | -0.8394 | -0.8145 | -0.8133 | 0.0261 | acceptor | a0001c0002 | HG01169.hp2 | HG02258.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99792234 | + | 3 | 0.9919 | 0.9917 | 0.9905 | 0.0013 | donor | a0001c0002 | NA19068.hp1 | HG04199.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99792359 | + | 3 | -0.9951 | -0.9950 | -0.9946 | 0.0005 | acceptor | a0001c0002 | HG02083.hp2 | HG04199.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99793551 | + | 4 | 0.9547 | 0.9470 | 0.9461 | 0.0086 | donor | a0001c0002 | HG03195.hp2 | HG00642.hp2 HG01952.hp2 HG02258.hp1 HG03017.hp1 NA18945.hp2 others(1): Show |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99793685 | + | 4 | -0.8888 | -0.8841 | -0.8712 | 0.0177 | acceptor | a0001c0002 | NA19003.hp1 | HG01167.hp1 HG01169.hp2 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99793892 | + | 5 | 0.9937 | 0.9935 | 0.9928 | 0.0009 | donor | a0001c0002 | HG00544.hp2 | HG01433.hp2 HG04184.hp1 NA18940.hp2 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99793999 | + | 5 | -0.9865 | -0.9857 | -0.9850 | 0.0015 | acceptor | a0001c0002 | HG01433.hp2 HG04184.hp1 NA18940.hp2 |
HG00544.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99794413 | + | 6 | 0.9785 | 0.9758 | 0.9734 | 0.0051 | donor | a0001c0002 | HG00140.hp1 | HG02040.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99794468 | + | 6 | -0.9889 | -0.9873 | -0.9861 | 0.0028 | acceptor | a0001c0002 | NA18971.hp1 NA19083.hp2 |
HG02040.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99797097 | + | 7 | 0.9841 | 0.9805 | 0.9772 | 0.0069 | donor | a0001c0002 | HG02717.hp1 | HG00621.hp1 HG02132.hp2 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99797331 | + | 7 | -0.9861 | -0.9849 | -0.9820 | 0.0041 | acceptor | a0001c0002 | HG00621.hp1 HG00733.hp2 HG00741.hp1 HG01175.hp2 HG01258.hp1 others(11): Show |
HG02451.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99799207 | + | 8 | 0.9694 | 0.9683 | 0.9676 | 0.0018 | donor | a0001c0002 | HG01255.hp2 HG01433.hp1 |
NA19003.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99799370 | + | 8 | -0.9745 | -0.9742 | -0.9736 | 0.0009 | acceptor | a0001c0002 | HG01255.hp2 HG01433.hp1 |
NA19084.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99800386 | + | 9 | 0.9907 | 0.9904 | 0.9904 | 0.0003 | donor | a0001c0002 | NA19003.hp1 | NA18945.hp2 NA18995.hp1 NA18998.hp1 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99800563 | + | 9 | -0.9902 | -0.9900 | -0.9899 | 0.0003 | acceptor | a0001c0002 | HG02818.hp1 | HG02683.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99804019 | + | 10 | 0.9458 | 0.9395 | 0.9214 | 0.0245 | donor | a0001c0002 | HG00673.hp2 | HG02683.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99804273 | + | 10 | -0.8753 | -0.8719 | -0.8583 | 0.0170 | acceptor | a0001c0002 | NA18992.hp1 | HG00673.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99805382 | + | 11 | 0.9923 | 0.9905 | 0.9864 | 0.0059 | donor | a0001c0002 | HG00621.hp1 | NA18992.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99805447 | + | 11 | -0.9958 | -0.9948 | -0.9920 | 0.0037 | acceptor | a0001c0002 | HG01517.hp1 NA18944.hp1 NA18987.hp1 |
HG00673.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99807384 | + | 12 | 0.9923 | 0.9918 | 0.9909 | 0.0014 | donor | a0001c0002 | HG00621.hp1 | NA19074.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99807521 | + | 12 | -0.9931 | -0.9926 | -0.9921 | 0.0010 | acceptor | a0001c0002 | NA18992.hp1 | NA19074.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99808083 | + | 13 | 0.9914 | 0.9911 | 0.9889 | 0.0025 | donor | a0001c0002 | HG02886.hp1 NA18985.hp1 |
NA19074.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99808229 | + | 13 | -0.9946 | -0.9942 | -0.9938 | 0.0009 | acceptor | a0001c0002 | NA18992.hp1 | NA19074.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99810134 | + | 14 | 0.9496 | 0.9486 | 0.9473 | 0.0023 | donor | a0001c0002 | HG02886.hp1 NA18992.hp1 |
NA19074.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99810218 | + | 14 | -0.9843 | -0.9841 | -0.9833 | 0.0010 | acceptor | a0001c0002 | NA18978.hp2 | HG01167.hp1 HG01169.hp2 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99811536 | + | 15 | 0.9599 | 0.9592 | 0.9572 | 0.0027 | donor | a0001c0002 | HG02083.hp2 | NA18992.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99811602 | + | 15 | -0.9815 | -0.9774 | -0.9771 | 0.0043 | acceptor | a0001c0002 | HG02818.hp1 HG03579.hp1 |
HG00544.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99813018 | + | 16 | 0.9413 | 0.9327 | 0.9188 | 0.0225 | donor | a0001c0002 | NA19003.hp1 | HG02132.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99813144 | + | 16 | -0.9886 | -0.9861 | -0.9807 | 0.0079 | acceptor | a0001c0002 | HG03139.hp1 HG03195.hp2 |
NA19055.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99817308 | + | 17 | 0.9700 | 0.9586 | 0.9539 | 0.0161 | donor | a0001c0002 | HG01167.hp1 HG01169.hp2 |
HG02886.hp1 NA18992.hp1 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99817484 | + | 17 | -0.9725 | -0.9693 | -0.9468 | 0.0256 | acceptor | a0001c0002 | HG02818.hp1 | HG02886.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99818790 | + | 18 | 0.9621 | 0.9526 | 0.9509 | 0.0113 | donor | a0001c0002 | HG02886.hp1 | HG02683.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99818957 | + | 18 | -0.9746 | -0.9711 | -0.9706 | 0.0040 | acceptor | a0001c0002 | HG02683.hp1 | HG00140.hp1 HG00741.hp1 HG01123.hp1 HG01358.hp1 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99819089 | + | 19 | 0.9961 | 0.9956 | 0.9956 | 0.0005 | donor | a0001c0002 | HG02683.hp1 | HG01167.hp1 HG01169.hp2 HG02818.hp1 HG03139.hp1 HG03195.hp2 others(2): Show |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99819269 | + | 19 | -0.9930 | -0.9928 | -0.9921 | 0.0009 | acceptor | a0001c0002 | HG02683.hp1 | NA18992.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99830307 | + | 20 | 0.9978 | 0.9978 | 0.9977 | 0.0001 | donor | a0001c0002 | HG01167.hp1 HG01169.hp2 HG03139.hp1 HG03195.hp2 HG04199.hp1 others(1): Show |
HG02040.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99830433 | + | 20 | -0.9958 | -0.9955 | -0.9954 | 0.0004 | acceptor | a0001c0002 | NA18992.hp1 | NA18990.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99830716 | + | 21 | 0.9731 | 0.9719 | 0.9705 | 0.0026 | donor | a0001c0002 | NA19004.hp1 | HG02818.hp1 HG03579.hp1 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99830851 | + | 21 | -0.9892 | -0.9889 | -0.9883 | 0.0009 | acceptor | a0001c0002 | NA18990.hp2 | HG02886.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99831611 | + | 22 | 0.9643 | 0.9618 | 0.9612 | 0.0031 | donor | a0001c0002 | NA18940.hp2 | HG01167.hp1 HG01169.hp2 HG02818.hp1 HG03139.hp1 HG03195.hp2 others(1): Show |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99831830 | + | 22 | -0.9700 | -0.9673 | -0.9664 | 0.0036 | acceptor | a0001c0002 | HG02523.hp2 NA18955.hp2 NA18962.hp1 |
HG01167.hp1 HG01169.hp2 HG02818.hp1 HG03139.hp1 HG03195.hp2 others(1): Show |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99831977 | + | 23 | 0.9826 | 0.9812 | 0.9807 | 0.0020 | donor | a0001c0002 | NA18940.hp2 | HG01167.hp1 HG01169.hp2 HG02818.hp1 HG03139.hp1 HG03195.hp2 others(1): Show |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99832131 | + | 23 | -0.9940 | -0.9938 | -0.9925 | 0.0015 | acceptor | a0001c0002 | NA18940.hp2 | HG01167.hp1 HG01169.hp2 HG02818.hp1 HG03139.hp1 HG03195.hp2 others(1): Show |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99834380 | + | 24 | 0.9937 | 0.9934 | 0.9933 | 0.0004 | donor | a0001c0002 | NA18940.hp2 | HG01167.hp1 HG03195.hp2 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99834535 | + | 24 | -0.9945 | -0.9944 | -0.9934 | 0.0011 | acceptor | a0001c0002 | HG01978.hp2 | NA18962.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99836091 | + | 25 | 0.9917 | 0.9912 | 0.9905 | 0.0012 | donor | a0001c0002 | HG00642.hp2 | NA18990.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99836290 | + | 25 | -0.9780 | -0.9769 | -0.9729 | 0.0051 | acceptor | a0001c0002 | HG00642.hp2 | NA19009.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99841967 | + | 26 | 0.9781 | 0.9718 | 0.9706 | 0.0075 | donor | a0001c0002 | HG03017.hp1 | NA18985.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99842093 | + | 26 | -0.9548 | -0.9527 | -0.9493 | 0.0056 | acceptor | a0001c0002 | HG03017.hp1 | NA18985.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99843799 | + | 27 | 0.9984 | 0.9983 | 0.9983 | 0.0000 | donor | a0001c0002 | HG00544.hp2 | HG01175.hp2 HG03017.hp1 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99843900 | + | 27 | -0.9984 | -0.9981 | -0.9980 | 0.0003 | acceptor | a0001c0002 | NA18955.hp2 | HG03017.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99844322 | + | 28 | 0.9988 | 0.9988 | 0.9985 | 0.0003 | donor | a0001c0002 | HG03098.hp2 | HG01175.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99844465 | + | 28 | -0.9988 | -0.9986 | -0.9986 | 0.0003 | acceptor | a0001c0002 | HG03098.hp2 | HG00738.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99845624 | + | 29 | 0.8753 | 0.8702 | 0.8686 | 0.0067 | donor | a0001c0002 | NA18992.hp2 NA19055.hp2 |
HG01255.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99845782 | + | 29 | -0.9747 | -0.9732 | -0.9724 | 0.0023 | acceptor | a0001c0002 | NA18992.hp2 NA19055.hp2 |
HG01175.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99846961 | + | 30 | 0.9963 | 0.9962 | 0.9961 | 0.0002 | donor | a0001c0002 | NA18992.hp2 NA19055.hp2 |
HG01255.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99847127 | + | 30 | -0.9974 | -0.9974 | -0.9974 | 0.0000 | acceptor | a0001c0002 | HG01255.hp2 | HG00738.hp2 HG03017.hp1 NA18992.hp2 NA19004.hp1 NA19055.hp2 |
ABCC2 | chr10 | 99777640 | 99857594 |
| 99850602 | + | 31 | 0.9958 | 0.9957 | 0.9957 | 0.0001 | donor | a0001c0002 | NA19055.hp2 | HG01433.hp1 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99850796 | + | 31 | -0.9973 | -0.9972 | -0.9972 | 0.0001 | acceptor | a0001c0002 | NA19083.hp2 | NA19055.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| 99851502 | + | 32 | 0.9552 | 0.9521 | 0.9497 | 0.0055 | donor | a0001c0002 | HG04199.hp1 | HG01255.hp2 | ABCC2 | chr10 | 99777640 | 99857594 |
| CHR:POS | annotationhgvs_chgvs_p | disease trait-log10podds or beta | AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
study | initial sample size/replication sample size | report genes | mapped gene | strongest snp risk allele | strand strand
|
impact | chr | ref | alt |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:99811236
|
c.1901-300C>A | Alanine aminotransferase levels0.04 | a0001a0002a0003a0004a0005others(18): Show | a0001c0001a0001c0002a0001c0005a0001c0014a0001c0017others(27): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0008a0001c0001t0010a0001c0002t0003others(33): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0012others(217): Show | HG00099.hp1 HG00140.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 others(222): Show |
Genetic architecture of routinely acquired blood t others(37): Show |
38,000 South Asian ancestry individuals/ | ABCC2 | rs7076773-A | + | MODIFIER | chr10 | C | A | |
|
chr10:99817203
|
c.2095-105T>C | X-21441 levels0.0992691 | a0001a0002a0003a0004a0005others(18): Show | a0001c0001a0001c0002a0001c0005a0001c0014a0001c0017others(27): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0008a0001c0001t0010a0001c0002t0003others(33): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0012others(217): Show | HG00099.hp1 HG00140.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 others(222): Show |
Genomic atlas of the plasma metabolome prioritizes others(42): Show |
8,030 European ancestry individuals/ | ABCC2 | rs3740073-C | + | MODIFIER | chr10 | T | C | |
|
chr10:99787519
|
c.207+2738G>A | X-21471 levels0.163215 | a0001a0002a0003a0004a0006others(3): Show | a0001c0001a0001c0002a0001c0005a0001c0017a0001c0027others(8): Show | a0001c0001t0001a0001c0002t0003a0001c0005t0001a0001c0017t0001a0001c0027t0001others(8): Show | a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0137a0001c0001t0001g0140a0001c0001t0001g0141others(78): Show | HG00438.hp2 HG00558.hp2 HG00673.hp1 HG00735.hp2 HG01109.hp1 others(80): Show |
Genomic atlas of the plasma metabolome prioritizes others(42): Show |
7,982 European ancestry individuals/ | ABCC2 | rs35683214-A | + | MODIFIER | chr10 | G | A | |
|
chr10:99798989
|
c.868-218G>T | Gamma glutamyl transferase levels0.019 | a0001a0002a0004a0005a0010others(9): Show | a0001c0001a0001c0002a0001c0007a0001c0014a0001c0035others(17): Show | a0001c0001t0001a0001c0001t0004a0001c0002t0002a0001c0002t0003a0001c0002t0006others(23): Show | a0001c0001t0001g0052a0001c0001t0001g0053a0001c0001t0001g0056a0001c0001t0001g0060a0001c0001t0001g0111others(150): Show | HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp1 HG00323.hp2 others(151): Show |
The contribution of common and rare genetic varian others(59): Show |
288,127 East Asian ancestry individuals/ | ABCC2 | rs2756109-T | + | MODIFIER | chr10 | G | T | |
|
chr10:99802512
|
c.1210-1507T>C | Gamma glutamyl transferase levels | a0001a0003a0004a0006a0017others(2): Show | a0001c0001a0001c0002a0001c0005a0001c0017a0001c0027others(7): Show | a0001c0001t0001a0001c0002t0002a0001c0002t0003a0001c0005t0001a0001c0017t0001others(8): Show | a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0137a0001c0001t0001g0140a0001c0001t0001g0141others(85): Show | HG00438.hp2 HG00558.hp2 HG00673.hp1 HG00735.hp2 HG01109.hp1 others(87): Show |
Analysis across Taiwan Biobank, Biobank Japan, and others(73): Show |
92,615 Taiwanese ancestry individuals/ | ABCC2 | rs10883413-? | + | MODIFIER | chr10 | T | C | |
|
chr10:99818560
|
c.2272-230C>T |
Gut microbiome abundance (class Lachnoclostridium sp. (at 1 year) x Fall Birth (Sept-Nov) interactio others(64): Show |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0046a0001c0002t0002g0094 | HG00738.hp2 HG01517.hp1 |
Gene-by-environment interactions modulate the infa others(38): Show |
up to 688 European ancestry, South Asian ancestry, others(238): Show |
ABCC2 | rs75947174-T | + | MODIFIER | chr10 | C | T | |
|
chr10:99798989
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c.868-218G>T | Alanine aminotransferase levels0.0186 | a0001a0002a0004a0005a0010others(9): Show | a0001c0001a0001c0002a0001c0007a0001c0014a0001c0035others(17): Show | a0001c0001t0001a0001c0001t0004a0001c0002t0002a0001c0002t0003a0001c0002t0006others(23): Show | a0001c0001t0001g0052a0001c0001t0001g0053a0001c0001t0001g0056a0001c0001t0001g0060a0001c0001t0001g0111others(150): Show | HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp1 HG00323.hp2 others(151): Show |
The contribution of common and rare genetic varian others(59): Show |
288,127 East Asian ancestry individuals/ | ABCC2 | rs2756109-T | + | MODIFIER | chr10 | G | T | |
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chr10:99815503
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c.2095-1805C>A | X-21467 levels0.143 | a0001a0002a0003a0004a0006others(16): Show | a0001c0001a0001c0002a0001c0005a0001c0014a0001c0017others(25): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0008a0001c0001t0010a0001c0002t0003others(31): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0012others(212): Show | HG00099.hp1 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 others(217): Show |
Metabolome Genome-Wide Association Study Identifie others(65): Show |
8,809 European ancestry individuals/ | ABCC2 | rs2902299-C | + | MODIFIER | chr10 | C | A | |
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chr10:99832401
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c.3258+270A>G | Metabolite levels (glycocholenate sulfate)others(6): Show | a0001a0002a0005a0006a0008others(10): Show | a0001c0001a0001c0002a0001c0005a0001c0017a0001c0027others(17): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0008a0001c0001t0010a0001c0002t0002others(22): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0012others(195): Show | HG00099.hp1 HG00140.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 others(198): Show |
Whole-Genome Sequencing Analysis of Human Metabolo others(31): Show |
9,016 European, Hispanic or African American indiv others(125): Show |
ABCC2 | rs58086078-T | + | MODIFIER | chr10 | A | G | |
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chr10:99782821
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c.-24C>T | Common executive function | a0001a0012a0023a0028 | a0001c0002a0001c0035a0001c0042a0012c0041a0023c0034others(1): Show | a0001c0002t0002a0001c0002t0011a0001c0035t0002a0001c0042t0002a0012c0041t0002others(2): Show | a0001c0002t0002g0032a0001c0002t0002g0035a0001c0002t0002g0037a0001c0002t0002g0038a0001c0002t0002g0040others(52): Show | HG00099.hp2 HG00140.hp1 HG00544.hp1 HG00544.hp2 HG00597.hp2 others(52): Show |
Genome-wide Association Study Shows That Executive others(117): Show |
427,037 European ancestry individuals/ | ABCC2 | rs717620-? | + | LOW | chr10 | C | T | |
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chr10:99797572
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c.867+241A>C | DNMBP/TBCC protein level ratio0.0765875 | a0001a0002a0003a0004a0006others(12): Show | a0001c0001a0001c0002a0001c0005a0001c0014a0001c0017others(22): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0008a0001c0001t0010a0001c0002t0003others(28): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0132others(206): Show | HG00099.hp1 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 others(211): Show |
Genetic associations with ratios between protein l others(63): Show |
43,509 European ancestry individuals/ | ABCC2 | rs6584327-? | + | MODIFIER | chr10 | A | C |