| geneid | 29974 |
|---|---|
| ensemblid | ENSG00000148584.16 |
| hgncid | 24086 |
| symbol | A1CF |
| name | APOBEC1 complementation factor |
| refseq_nuc | NM_014576.4 |
| refseq_prot | NP_055391.2 |
| ensembl_nuc | ENST00000373997.8 |
| ensembl_prot | ENSP00000363109.3 |
| mane_status | MANE Select |
| chr | chr10 |
| start | 50799409 |
| end | 50885627 |
| strand | - |
| ver | v1.2 |
| region | chr10:50799409-50885627 |
| region5000 | chr10:50794409-50890627 |
| regionname0 | A1CF_chr10_50799409_50885627 |
| regionname5000 | A1CF_chr10_50794409_50890627 |
| chr:pos | ref | alt | af | annotation | impact | samples | AHAPIDS | ACHAPIDS | ACTHAPIDS | ACTGHAPIDS | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|
| chr:pos | ref | alt | af | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|
| chr:pos | ref | alt | af | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:50800083
|
T | G | 0.8491 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*6646A>C | 6646 | |||||
|
chr10:50800699
|
G | A | 0.9970 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(55): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(283): Show | 337 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*6030C>T | 6030 | |||||
|
chr10:50800716
|
G | A | 0.1686 | 3_prime_UTR_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(54): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0002a0001c0001t0035a0001c0001t0036others(2): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(45): Show | 57 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*6013C>T | 6013 | |||||
|
chr10:50800797
|
G | A | 0.8491 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*5932C>T | 5932 | |||||
|
chr10:50802069
|
C | A | 0.8491 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*4660G>T | 4660 | |||||
|
chr10:50802159
|
C | T | 0.1686 | 3_prime_UTR_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(54): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0002a0001c0001t0035a0001c0001t0036others(2): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(45): Show | 57 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*4570G>A | 4570 | |||||
|
chr10:50803291
|
C | T | 0.3195 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(105): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0002a0001c0001t0003a0001c0001t0011others(8): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(86): Show | 108 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*3438G>A | 3438 | |||||
|
chr10:50804315
|
A | AT | 0.3195 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(105): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0002a0001c0001t0003a0001c0001t0011others(8): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(86): Show | 108 | 338 | 1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*2413dupA | 2413 | |||||
|
chr10:50804661
|
G | A | 0.8284 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(277): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(39): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(235): Show | 280 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*2068C>T | 2068 | |||||
|
chr10:50806180
|
A | C | 0.8343 | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(279): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(41): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(237): Show | 282 | 338 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 13/13 | c.*549T>G | 549 |
| chr:pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:50807215
|
G | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(300): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(255): Show | 303 | 338 | 0.8965 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 12/12 | c.1610-335C>A | ||||||
|
chr10:50808105
|
A | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(286): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(44): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(243): Show | 289 | 338 | 0.8550 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 12/12 | c.1610-1225T>C | ||||||
|
chr10:50808856
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(284): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 287 | 338 | 0.8491 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 12/12 | c.1609+1038A>G | ||||||
|
chr10:50810355
|
G | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(106): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0113a0001c0001t0002g0001a0001c0001t0002g0007others(87): Show | 109 | 338 | 0.3225 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 11/12 | c.1461-313C>G | ||||||
|
chr10:50811287
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(55): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(283): Show | 337 | 338 | 0.9970 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-111G>A | ||||||
|
chr10:50811485
|
A | G | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(109): Show |
a0001 | a0001c0001a0001c0007a0001c0011 | a0001c0001t0002a0001c0001t0003a0001c0001t0011others(11): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(90): Show | 112 | 338 | 0.3314 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-309T>C | ||||||
|
chr10:50811742
|
C | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(300): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(255): Show | 303 | 338 | 0.8965 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-566G>C | ||||||
|
chr10:50812164
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(106): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0113a0001c0001t0002g0001a0001c0001t0002g0007others(87): Show | 109 | 338 | 0.3225 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 10/12 | c.1324-988A>G | ||||||
|
chr10:50814313
|
C | G | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(109): Show |
a0001 | a0001c0001a0001c0007a0001c0011 | a0001c0001t0002a0001c0001t0003a0001c0001t0011others(11): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(90): Show | 112 | 338 | 0.3314 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 9/12 | c.1142-275G>C | ||||||
|
chr10:50814344
|
A | G | intron_variant | MODIFIER | HG00438.hp2 HG00558.hp1 HG02027.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0049 | a0001c0001t0002g0170a0001c0001t0002g0172a0001c0001t0002g0175others(10): Show | 13 | 338 | 0.0385 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 9/12 | c.1142-306T>C | ||||||
|
chr10:50814885
|
A | G | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(61): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0002a0001c0001t0003a0001c0001t0030others(4): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(50): Show | 64 | 338 | 0.1894 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 9/12 | c.1142-847T>C | ||||||
|
chr10:50816308
|
G | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(289): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(244): Show | 292 | 338 | 0.8639 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.868-29C>T | ||||||
|
chr10:50817113
|
G | A | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(109): Show |
a0001 | a0001c0001a0001c0007a0001c0011 | a0001c0001t0002a0001c0001t0003a0001c0001t0011others(11): Show | a0001c0001t0002g0001a0001c0001t0002g0007a0001c0001t0002g0027others(90): Show | 112 | 338 | 0.3314 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.868-834C>T | ||||||
|
chr10:50817296
|
A | C | intron_variant | MODIFIER | NA18966.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0177 | 1 | 338 | 0.0030 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.868-1017T>G | ||||||
|
chr10:50818352
|
T | A | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00544.hp1 others(109): Show |
a0001 | a0001c0001a0001c0007a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0113a0001c0001t0002g0001a0001c0001t0002g0007others(90): Show | 112 | 338 | 0.3314 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.868-2073A>T | ||||||
|
chr10:50818518
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(324): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(51): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(274): Show | 327 | 338 | 0.9675 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 8/12 | c.867+2034G>A | ||||||
|
chr10:50826860
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(327): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(49): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(276): Show | 330 | 338 | 0.9763 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 7/12 | c.769+1271A>G | ||||||
|
chr10:50831539
|
A | T | intron_variant | MODIFIER | NA18966.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0177 | 1 | 338 | 0.0030 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.605-3244T>A | ||||||
|
chr10:50834010
|
T | C | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(75): Show |
a0001 | a0001c0001a0001c0003a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0004a0001c0001t0001g0169a0001c0001t0001g0189others(61): Show | 78 | 338 | 0.2308 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 6/12 | c.604+2064A>G | ||||||
|
chr10:50840035
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(328): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(277): Show | 331 | 338 | 0.9793 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 5/12 | c.365+1827A>G | ||||||
|
chr10:50844563
|
A | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(332): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(281): Show | 335 | 338 | 0.9911 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-441T>G | ||||||
|
chr10:50849248
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(100): Show |
a0001 | a0001c0001a0001c0003a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0169others(79): Show | 103 | 338 | 0.3047 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-5126A>G | ||||||
|
chr10:50849786
|
C | CT | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(201): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(31): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(166): Show | 204 | 338 | 0.6036 | 1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.100-5665dupA | ||||||
|
chr10:50852902
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(98): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0169others(77): Show | 101 | 338 | 0.2988 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+6940G>A | ||||||
|
chr10:50853275
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(332): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(281): Show | 335 | 338 | 0.9911 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+6567G>A | ||||||
|
chr10:50853804
|
A | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(299): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(38): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(252): Show | 302 | 338 | 0.8935 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+6038T>A | ||||||
|
chr10:50855262
|
T | A | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(70): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0004a0001c0001t0001g0169a0001c0001t0001g0189others(56): Show | 73 | 338 | 0.2160 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+4580A>T | ||||||
|
chr10:50855510
|
C | G | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(99): Show |
a0001 | a0001c0001a0001c0003a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0169others(78): Show | 102 | 338 | 0.3018 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+4332G>C | ||||||
|
chr10:50856287
|
A | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(100): Show |
a0001 | a0001c0001a0001c0003a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0169others(79): Show | 103 | 338 | 0.3047 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 3/12 | c.99+3555T>G | ||||||
|
chr10:50860705
|
G | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(315): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(265): Show | 318 | 338 | 0.9408 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 2/12 | c.-45-720C>T | ||||||
|
chr10:50861856
|
A | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(325): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(274): Show | 328 | 338 | 0.9704 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 2/12 | c.-45-1871T>C | ||||||
|
chr10:50865510
|
A | G | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(71): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0004a0001c0001t0001g0169a0001c0001t0001g0189others(57): Show | 74 | 338 | 0.2189 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-1430T>C | ||||||
|
chr10:50869812
|
C | A | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(73): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0004a0001c0001t0001g0169a0001c0001t0001g0189others(59): Show | 76 | 338 | 0.2249 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-5732G>T | ||||||
|
chr10:50870425
|
G | A | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00544.hp1 others(126): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0011others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0004a0001c0001t0001g0169a0001c0001t0001g0189others(103): Show | 129 | 338 | 0.3817 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-6345C>T | ||||||
|
chr10:50870665
|
G | C | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00544.hp1 others(127): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0011others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0004a0001c0001t0001g0169a0001c0001t0001g0189others(104): Show | 130 | 338 | 0.3846 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-6585C>G | ||||||
|
chr10:50870968
|
T | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(328): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(277): Show | 331 | 338 | 0.9793 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-6888A>T | ||||||
|
chr10:50871981
|
A | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(332): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(281): Show | 335 | 338 | 0.9911 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-7901T>A | ||||||
|
chr10:50872946
|
CT | C | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(107): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0004a0001c0001t0001g0024a0001c0001t0001g0099others(86): Show | 110 | 338 | 0.3254 | -1 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-8867delA | ||||||
|
chr10:50873248
|
G | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(288): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(241): Show | 291 | 338 | 0.8610 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-9168C>A | ||||||
|
chr10:50873699
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp2 others(120): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0063others(98): Show | 123 | 338 | 0.3639 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-93-9619G>A | ||||||
|
chr10:50879173
|
T | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(278): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(36): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020others(236): Show | 281 | 338 | 0.8314 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+6408A>C | ||||||
|
chr10:50880116
|
C | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(55): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(283): Show | 337 | 338 | 0.9970 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+5465G>A | ||||||
|
chr10:50881804
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(318): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(267): Show | 321 | 338 | 0.9497 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+3777A>G | ||||||
|
chr10:50882028
|
T | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(318): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(267): Show | 321 | 338 | 0.9497 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+3553A>C | ||||||
|
chr10:50883318
|
A | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(258): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020others(219): Show | 261 | 338 | 0.7722 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+2263T>C | ||||||
|
chr10:50883461
|
T | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(258): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020others(219): Show | 261 | 338 | 0.7722 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+2120A>G | ||||||
|
chr10:50884062
|
A | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(323): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(272): Show | 326 | 338 | 0.9645 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+1519T>C | ||||||
|
chr10:50884324
|
G | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(323): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(272): Show | 326 | 338 | 0.9645 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+1257C>T | ||||||
|
chr10:50884716
|
T | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(323): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(48): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011others(272): Show | 326 | 338 | 0.9645 | 0 | A1CF | ENSG00000148584.16 | transcript | ENST00000373997.8 | protein_coding | 1/12 | c.-94+865A>G |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
ahapid | alen | total | AFR | AMR | EAS | EUR | SAS | aseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 1/1 | a0001 | 586 | 325 | 77 | 49 | 145 | 12 | 40 | subcellular location copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
chapid | clen | total | AFR | AMR | EAS | EUR | SAS | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 1/1 | c0001 | 1761 | 259 | 56 | 45 | 110 | 11 | 35 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 | thapid | tlen | total | AFR | AMR | EAS | EUR | SAS | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | t0002 | 7462 | 54 | 0 | 2 | 43 | 0 | 9 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 | ghapid | total | AFR | AMR | EAS | EUR | SAS | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | g0177 | 1 | 0 | 0 | 1 | 0 | 0 | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
achapid | total | AFR | AMR | EAS | EUR | SAS | clen | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 1/1 | a0001c0001 | 259 | 56 | 45 | 110 | 11 | 35 | 1761 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
acthapid | total | AFR | AMR | EAS | EUR | SAS | tlen | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | a0001c0001t0002 | 53 | 0 | 2 | 42 | 0 | 9 | 9222 | copy fasta | chr10 | 50794409 | 50890627 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
actghapid | total | AFR | AMR | EAS | EUR | SAS | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A1CF | 0/0 | a0001c0001t0002g0177 | 1 | 0 | 0 | 1 | 0 | 0 | chr10 | 50794409 | 50890627 |
Click to load Haplotype QTL data...
| pos | S. Strand |
E# Exon Number |
max | median | min | diff | type | haplotypeid | max_hap_list | min_hap_list | symbol | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50864033 | - | 2 | -0.2395 | -0.2395 | -0.2395 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50864080 | - | 2 | 0.3885 | 0.3885 | 0.3885 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50859842 | - | 3 | -0.7497 | -0.7497 | -0.7497 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50859985 | - | 3 | 0.8118 | 0.8118 | 0.8118 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50843988 | - | 4 | -0.9972 | -0.9972 | -0.9972 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50844122 | - | 4 | 0.9887 | 0.9887 | 0.9887 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50841862 | - | 5 | -0.9954 | -0.9954 | -0.9954 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50841992 | - | 5 | 0.9928 | 0.9928 | 0.9928 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50836074 | - | 6 | -0.9692 | -0.9692 | -0.9692 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50836312 | - | 6 | 0.9280 | 0.9280 | 0.9280 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50828131 | - | 7 | -0.9959 | -0.9959 | -0.9959 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50828295 | - | 7 | 0.9731 | 0.9731 | 0.9731 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50820552 | - | 8 | -0.9953 | -0.9953 | -0.9953 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50820649 | - | 8 | 0.9932 | 0.9932 | 0.9932 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50816006 | - | 9 | -0.7380 | -0.7380 | -0.7380 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50816279 | - | 9 | 0.8167 | 0.8167 | 0.8167 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50813857 | - | 10 | -0.7497 | -0.7497 | -0.7497 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50814038 | - | 10 | 0.5897 | 0.5897 | 0.5897 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50811040 | - | 11 | -0.9037 | -0.9037 | -0.9037 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50811176 | - | 11 | 0.8018 | 0.8018 | 0.8018 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50809894 | - | 12 | -0.9814 | -0.9814 | -0.9814 | 0.0000 | acceptor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50810042 | - | 12 | 0.9801 | 0.9801 | 0.9801 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| 50806880 | - | 13 | 0.9076 | 0.9076 | 0.9076 | 0.0000 | donor | a0001c0001t0002g0177 | NA18966.hp2 | NA18966.hp2 | A1CF | chr10 | 50794409 | 50890627 |
| pos | annotationhgvs_chgvs_p | clinvarid | clnsig | geneinfo | mc | clndisdb | strand strand
|
ahapid ahapid_count
|
chapid chapid count
|
thapid thapid_count
|
ghapid ghapid_count
|
AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
impact | chr | ref | alt | external |
|---|
| CHR:POS | annotationhgvs_chgvs_p | disease trait-log10podds or beta | AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
study | initial sample size/replication sample size | report genes | mapped gene | strongest snp risk allele | strand strand
|
impact | chr | ref | alt |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr10:50808856
|
c.1609+1038A>G | Urate levels in lean individuals0.08 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0007others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0007a0001c0001t0009others(40): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0020a0001c0001t0001g0021others(239): Show | HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00423.hp1 others(282): Show |
Modulation of genetic associations with serum urat others(38): Show |
up to 5,529 European ancestry male individuals, up others(47): Show |
ASAH2B, A1CF | ASAH2B, A1CF | rs4256922-C | - | MODIFIER | chr10 | T | C |
|
chr10:50879173
|
c.-94+6408A>C | Cognitive function0.58 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0009others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0005a0001c0001t0007others(34): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020a0001c0001t0001g0021a0001c0001t0001g0022others(234): Show | HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00423.hp2 HG00438.hp1 others(276): Show |
Genome-wide association study of population-standa others(75): Show |
2,211 Sub-Saharan African ancestry individuals/ | A1CF | rs6479768-G | - | MODIFIER | chr10 | T | G | |
|
chr10:50834010
|
c.604+2064A>G | Essential tremor0.8914553 | a0001 | a0001c0001a0001c0003a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0011a0001c0001t0035others(4): Show | a0001c0001t0001g0004a0001c0001t0001g0169a0001c0001t0001g0189a0001c0001t0001g0197a0001c0001t0001g0220others(59): Show | HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00621.hp2 others(73): Show |
Association of Essential Tremor With Novel Risk Lo others(54): Show |
7,177 European ancestry cases, 475,877 European an others(16): Show |
A1CF | rs16909866-C | - | MODIFIER | chr10 | T | C | |
|
chr10:50889433
|
c.-3946A>G | Colorectal cancer0.173862 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0011others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0005a0001c0001t0007others(25): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0020a0001c0001t0001g0021others(184): Show | HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00423.hp1 HG00423.hp2 others(221): Show |
New role of fat-free mass in cancer risk linked wi others(26): Show |
4,988 European ancestry cases, 310,272 European an others(16): Show |
A1CF - MIX23P2 | rs10761587-C | - | MODIFIER | chr10 | T | C | |
|
chr10:50849248
|
c.100-5126A>G | Type 2 diabetes | a0001 | a0001c0001a0001c0003a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0007a0001c0001t0011others(10): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0169a0001c0001t0001g0189a0001c0001t0001g0197others(77): Show | HG00140.hp1 HG00423.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 others(98): Show |
Genetic drivers of heterogeneity in type 2 diabete others(18): Show |
50,251 African American cases, 103,909 African Ame others(353): Show |
A1CF | rs12570156-T | - | MODIFIER | chr10 | T | C | |
|
chr10:50883318
|
c.-94+2263T>C | Glucose levels0.0136 | a0001a0002a0003 | a0001c0001a0001c0002a0001c0003a0001c0005a0001c0007others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003a0001c0001t0005a0001c0001t0007others(35): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0020a0001c0001t0001g0021a0001c0001t0001g0022others(217): Show | HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00438.hp1 HG00438.hp2 others(256): Show |
A cross-population atlas of genetic associations f others(24): Show |
314,916 European ancestry individuals, 133,336 Eas others(29): Show |
A1CF | rs7075575-G | - | MODIFIER | chr10 | A | G |