| geneid | 10349 |
|---|---|
| ensemblid | ENSG00000154263.18 |
| hgncid | 30 |
| symbol | ABCA10 |
| name | ATP binding cassette subfamily A member 10 |
| refseq_nuc | NM_001377321.1 |
| refseq_prot | NP_001364250.1 |
| ensembl_nuc | ENST00000690296.1 |
| ensembl_prot | ENSP00000509702.1 |
| mane_status | MANE Select |
| chr | chr17 |
| start | 69148007 |
| end | 69228824 |
| strand | - |
| ver | v1.2 |
| region | chr17:69148007-69228824 |
| region5000 | chr17:69143007-69233824 |
| regionname0 | ABCA10_chr17_69148007_69228824 |
| regionname5000 | ABCA10_chr17_69143007_69233824 |
| chr:pos | ref | alt | af | annotation | impact | samples | AHAPIDS | ACHAPIDS | ACTHAPIDS | ACTGHAPIDS | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|
| chr:pos | ref | alt | af | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|
| chr:pos | ref | alt | af | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr17:69228706
|
G | T | 0.9368 | 5_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(323): Show |
a0001a0002a0003others(22): Show | a0001c0001a0001c0034a0001c0035others(33): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0013others(42): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(317): Show | 326 | 348 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 1/39 | c.-438C>A | 3348 |
| chr:pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr17:69152623
|
A | G | intron_variant | MODIFIER | NA18956.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0081 | 1 | 348 | 0.0029 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 34/38 | c.4137-142T>C | ||||||
|
chr17:69154035
|
T | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(339): Show |
a0001a0002a0003others(23): Show | a0001c0001a0001c0034a0001c0035others(34): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(48): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(333): Show | 342 | 348 | 0.9828 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 31/38 | c.3787-26A>G | ||||||
|
chr17:69154420
|
CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(208): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0034a0001c0035others(18): Show | a0001c0001t0002a0001c0001t0013a0001c0034t0002others(22): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(205): Show | 211 | 348 | 0.6063 | -1 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 30/38 | c.3695-95delA | ||||||
|
chr17:69162808
|
T | TATATAC | intron_variant | MODIFIER | HG02165.hp2 HG02523.hp1 HG03130.hp1 others(7): Show |
a0001a0018 | a0001c0001a0018c0036 | a0001c0001t0002a0001c0001t0008a0018c0036t0002 | a0001c0001t0002g0035a0001c0001t0002g0040a0001c0001t0002g0066others(7): Show | 10 | 348 | 0.0287 | 6 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 27/38 | c.3363+1260_3363+1265dupGTATAT | ||||||
|
chr17:69168493
|
C | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(339): Show |
a0001a0002a0003others(23): Show | a0001c0001a0001c0034a0001c0035others(34): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(48): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(333): Show | 342 | 348 | 0.9828 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 25/38 | c.3163-3410G>C | ||||||
|
chr17:69171934
|
C | CA | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(146): Show |
a0001a0003a0004others(11): Show | a0001c0001a0001c0034a0001c0035others(17): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(23): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(144): Show | 149 | 348 | 0.4282 | 1 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 25/38 | c.3162+2346dupT | ||||||
|
chr17:69176932
|
T | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(344): Show |
a0001a0002a0003others(23): Show | a0001c0001a0001c0034a0001c0035others(34): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(48): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(338): Show | 347 | 348 | 0.9971 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 22/38 | c.2770-1419A>G | ||||||
|
chr17:69192435
|
A | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(323): Show |
a0001a0002a0003others(22): Show | a0001c0001a0001c0034a0001c0035others(33): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(45): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(317): Show | 326 | 348 | 0.9368 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 16/38 | c.1871+128T>C | ||||||
|
chr17:69192527
|
T | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(344): Show |
a0001a0002a0003others(23): Show | a0001c0001a0001c0034a0001c0035others(34): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(48): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(338): Show | 347 | 348 | 0.9971 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 16/38 | c.1871+36A>G | ||||||
|
chr17:69194951
|
A | G | intron_variant | MODIFIER | NA18956.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0081 | 1 | 348 | 0.0029 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 11/38 | c.1235-456T>C | ||||||
|
chr17:69195129
|
C | G | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00642.hp1 others(78): Show |
a0001a0012a0014others(4): Show | a0001c0001a0001c0034a0001c0035others(6): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013others(8): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(77): Show | 81 | 348 | 0.2328 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 11/38 | c.1235-634G>C | ||||||
|
chr17:69195554
|
C | CT | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(92): Show |
a0001a0004a0009others(5): Show | a0001c0001a0001c0034a0001c0035others(7): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(12): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(91): Show | 95 | 348 | 0.2730 | 1 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 11/38 | c.1235-1060dupA | ||||||
|
chr17:69200002
|
T | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00642.hp1 others(73): Show |
a0001a0012a0014others(4): Show | a0001c0001a0001c0034a0001c0035others(6): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013others(8): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(72): Show | 76 | 348 | 0.2184 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 10/38 | c.1175+1498A>G | ||||||
|
chr17:69210081
|
T | TTTA | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00642.hp1 others(84): Show |
a0001a0003a0005others(5): Show | a0001c0001a0001c0034a0003c0028others(6): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(9): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(83): Show | 87 | 348 | 0.2500 | 3 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 9/38 | c.1006+4620_1006+4622dupTAA | ||||||
|
chr17:69211314
|
GATAT | G | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG01123.hp2 others(23): Show |
a0001a0009a0017 | a0001c0001a0009c0018a0017c0033 | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(3): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0030others(22): Show | 26 | 348 | 0.0747 | -4 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 9/38 | c.1006+3386_1006+3389delATAT | ||||||
|
chr17:69223319
|
A | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(326): Show |
a0001a0002a0003others(22): Show | a0001c0001a0001c0034a0001c0035others(33): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(45): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(320): Show | 329 | 348 | 0.9454 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.35-622T>C | ||||||
|
chr17:69223562
|
G | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(221): Show |
a0001a0002a0003others(17): Show | a0001c0001a0001c0034a0002c0002others(27): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0017others(35): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0040others(216): Show | 224 | 348 | 0.6437 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.35-865C>T | ||||||
|
chr17:69223919
|
T | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(154): Show |
a0001a0002a0003others(14): Show | a0001c0001a0001c0034a0002c0002others(23): Show | a0001c0001t0002a0001c0034t0002a0002c0002t0001others(25): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(151): Show | 157 | 348 | 0.4512 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.35-1222A>C | ||||||
|
chr17:69224313
|
C | T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(202): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0034a0002c0002others(23): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0017others(28): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(198): Show | 205 | 348 | 0.5891 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+1012G>A | ||||||
|
chr17:69224382
|
G | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(127): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0034a0002c0002others(11): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0018others(13): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(125): Show | 130 | 348 | 0.3736 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+943C>T | ||||||
|
chr17:69224495
|
C | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(114): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0034a0002c0002others(8): Show | a0001c0001t0002a0001c0034t0002a0002c0002t0001others(8): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(112): Show | 117 | 348 | 0.3362 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+830G>C | ||||||
|
chr17:69224688
|
G | GA | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(118): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0034a0002c0002others(11): Show | a0001c0001t0002a0001c0034t0002a0002c0002t0001others(11): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(116): Show | 121 | 348 | 0.3477 | 1 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+636dupT | ||||||
|
chr17:69224718
|
A | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(234): Show |
a0001a0002a0003others(18): Show | a0001c0001a0001c0034a0002c0002others(28): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0017others(35): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(229): Show | 237 | 348 | 0.6810 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+607T>A | ||||||
|
chr17:69224862
|
T | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(117): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0034a0002c0002others(10): Show | a0001c0001t0002a0001c0034t0002a0002c0002t0001others(10): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(115): Show | 120 | 348 | 0.3448 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+463A>G | ||||||
|
chr17:69225116
|
AAAAC | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(116): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0034a0002c0002others(10): Show | a0001c0001t0002a0001c0034t0002a0002c0002t0001others(10): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(114): Show | 119 | 348 | 0.3420 | -4 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+205_34+208delGTTT | ||||||
|
chr17:69225173
|
T | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(344): Show |
a0001a0002a0003others(23): Show | a0001c0001a0001c0034a0001c0035others(34): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008others(48): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026others(338): Show | 347 | 348 | 0.9971 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 3/38 | c.34+152A>G | ||||||
|
chr17:69226670
|
G | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(233): Show |
a0001a0002a0003others(18): Show | a0001c0001a0001c0034a0002c0002others(28): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0017others(35): Show | a0001c0001t0002g0001a0001c0001t0002g0026a0001c0001t0002g0035others(228): Show | 236 | 348 | 0.6782 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 2/38 | c.-172+475C>T | ||||||
|
chr17:69226680
|
C | T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(28): Show |
a0001a0002a0003others(4): Show | a0001c0001a0002c0002a0003c0003others(4): Show | a0001c0001t0002a0002c0002t0001a0003c0003t0001others(4): Show | a0001c0001t0002g0001a0001c0001t0002g0040a0001c0001t0002g0072others(27): Show | 31 | 348 | 0.0891 | 0 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 2/38 | c.-172+465G>A | ||||||
|
chr17:69227114
|
G | GATATATA others(7): Show |
intron_variant | MODIFIER | HG00280.hp2 HG00609.hp1 HG00639.hp2 others(48): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0034a0002c0002others(7): Show | a0001c0001t0002a0001c0034t0002a0002c0002t0001others(7): Show | a0001c0001t0002g0026a0001c0001t0002g0072a0001c0001t0002g0073others(47): Show | 51 | 348 | 0.1466 | 14 | ABCA10 | ENSG00000154263.18 | transcript | ENST00000690296.1 | protein_coding | 2/38 | c.-172+17_-172+30dupATATATATATATAT |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
ahapid | alen | total | AFR | AMR | EAS | EUR | SAS | aseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCA10 | 1/0 | a0001 | 1543 | 96 | 17 | 11 | 54 | 3 | 10 | subcellular location copy fasta | chr17 | 69143007 | 69233824 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
chapid | clen | total | AFR | AMR | EAS | EUR | SAS | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCA10 | 1/0 | c0001 | 4632 | 94 | 17 | 11 | 53 | 3 | 9 | copy fasta | chr17 | 69143007 | 69233824 |
| genename | grch38/chm13v2 | thapid | tlen | total | AFR | AMR | EAS | EUR | SAS | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCA10 | 0/0 | t0002 | 1377 | 92 | 10 | 11 | 60 | 2 | 9 | copy fasta | chr17 | 69143007 | 69233824 |
| genename | grch38/chm13v2 | ghapid | total | AFR | AMR | EAS | EUR | SAS | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCA10 | 0/0 | g0081 | 1 | 0 | 0 | 1 | 0 | 0 | chr17 | 69143007 | 69233824 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
achapid | total | AFR | AMR | EAS | EUR | SAS | clen | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCA10 | 1/0 | a0001c0001 | 94 | 17 | 11 | 53 | 3 | 9 | 4632 | copy fasta | chr17 | 69143007 | 69233824 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
acthapid | total | AFR | AMR | EAS | EUR | SAS | tlen | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCA10 | 0/0 | a0001c0001t0002 | 81 | 9 | 11 | 51 | 2 | 8 | 6008 | copy fasta | chr17 | 69143007 | 69233824 |
| genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
actghapid | total | AFR | AMR | EAS | EUR | SAS | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCA10 | 0/0 | a0001c0001t0002g0081 | 1 | 0 | 0 | 1 | 0 | 0 | chr17 | 69143007 | 69233824 |
Click to load Haplotype QTL data...
| pos | S. Strand |
E# Exon Number |
max | median | min | diff | type | haplotypeid | max_hap_list | min_hap_list | symbol | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69228581 | - | 1 | -0.7653 | -0.7653 | -0.7653 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69227145 | - | 2 | -0.9733 | -0.9733 | -0.9733 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69227285 | - | 2 | 0.9865 | 0.9865 | 0.9865 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69225325 | - | 3 | -0.9207 | -0.9207 | -0.9207 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69225529 | - | 3 | 0.4691 | 0.4691 | 0.4691 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69222533 | - | 4 | -0.9954 | -0.9954 | -0.9954 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69222697 | - | 4 | 0.9894 | 0.9893 | 0.9894 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69221792 | - | 5 | -0.2308 | -0.2308 | -0.2308 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69221895 | - | 5 | 0.2395 | 0.2395 | 0.2395 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69219545 | - | 6 | -0.9390 | -0.9390 | -0.9390 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69219771 | - | 6 | 0.7223 | 0.7223 | 0.7223 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69216217 | - | 7 | -0.2583 | -0.2583 | -0.2583 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69216358 | - | 7 | 0.3841 | 0.3841 | 0.3841 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69215815 | - | 8 | -0.6954 | -0.6954 | -0.6954 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69216000 | - | 8 | 0.7623 | 0.7623 | 0.7623 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69214704 | - | 9 | -0.6807 | -0.6807 | -0.6807 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69214851 | - | 9 | 0.5914 | 0.5914 | 0.5914 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69201500 | - | 10 | -0.8177 | -0.8177 | -0.8177 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69201668 | - | 10 | 0.5814 | 0.5814 | 0.5814 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69197064 | - | 11 | -0.9797 | -0.9797 | -0.9797 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69197122 | - | 11 | 0.9942 | 0.9942 | 0.9942 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69194385 | - | 12 | -0.9888 | -0.9888 | -0.9888 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69194495 | - | 12 | 0.9967 | 0.9967 | 0.9967 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69193814 | - | 13 | -0.8120 | -0.8120 | -0.8120 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69193989 | - | 13 | 0.8819 | 0.8819 | 0.8819 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69193493 | - | 14 | -0.9502 | -0.9502 | -0.9502 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69193612 | - | 14 | 0.9860 | 0.9860 | 0.9860 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69193110 | - | 15 | -0.9707 | -0.9707 | -0.9707 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69193248 | - | 15 | 0.9922 | 0.9922 | 0.9922 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69192563 | - | 16 | -0.9245 | -0.9245 | -0.9245 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69192653 | - | 16 | 0.9612 | 0.9612 | 0.9612 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69191176 | - | 17 | -0.9432 | -0.9432 | -0.9432 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69191315 | - | 17 | 0.9734 | 0.9734 | 0.9734 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69190358 | - | 18 | -0.9944 | -0.9944 | -0.9944 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69190477 | - | 18 | 0.9878 | 0.9878 | 0.9878 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69187681 | - | 19 | -0.9735 | -0.9735 | -0.9735 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69187879 | - | 19 | 0.9879 | 0.9879 | 0.9879 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69185477 | - | 20 | -0.9276 | -0.9276 | -0.9276 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69185643 | - | 20 | 0.7087 | 0.7087 | 0.7087 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69182675 | - | 21 | -0.9993 | -0.9993 | -0.9993 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69182808 | - | 21 | 0.9962 | 0.9961 | 0.9962 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69182153 | - | 22 | -0.9050 | -0.9050 | -0.9050 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69182290 | - | 22 | 0.9825 | 0.9825 | 0.9825 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69175406 | - | 23 | -0.7904 | -0.7904 | -0.7904 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69175513 | - | 23 | 0.8111 | 0.8111 | 0.8111 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69174607 | - | 24 | -0.4174 | -0.4174 | -0.4174 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69174777 | - | 24 | 0.4285 | 0.4285 | 0.4285 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69174281 | - | 25 | -0.5746 | -0.5746 | -0.5746 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69174394 | - | 25 | 0.4913 | 0.4913 | 0.4913 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69164964 | - | 26 | -0.3208 | -0.3208 | -0.3208 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69165083 | - | 26 | 0.2677 | 0.2677 | 0.2677 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69164074 | - | 27 | -0.3867 | -0.3867 | -0.3867 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69164154 | - | 27 | 0.4957 | 0.4957 | 0.4957 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69156832 | - | 28 | -0.7756 | -0.7756 | -0.7756 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69156923 | - | 28 | 0.8673 | 0.8673 | 0.8673 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69155805 | - | 29 | -0.9980 | -0.9980 | -0.9980 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69155925 | - | 29 | 0.9991 | 0.9991 | 0.9991 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69155019 | - | 30 | -0.9974 | -0.9974 | -0.9974 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69155136 | - | 30 | 0.9968 | 0.9968 | 0.9968 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69154235 | - | 31 | -0.9262 | -0.9262 | -0.9262 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69154326 | - | 31 | 0.9486 | 0.9486 | 0.9486 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69153831 | - | 32 | -0.9888 | -0.9888 | -0.9888 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69154009 | - | 32 | 0.9754 | 0.9754 | 0.9754 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69153471 | - | 33 | -0.8116 | -0.8116 | -0.8116 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69153546 | - | 33 | 0.9889 | 0.9889 | 0.9889 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69153305 | - | 34 | -0.9985 | -0.9985 | -0.9985 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69153399 | - | 34 | 0.9909 | 0.9909 | 0.9909 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69152362 | - | 35 | -0.9645 | -0.9645 | -0.9645 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69152481 | - | 35 | 0.9610 | 0.9610 | 0.9610 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69152043 | - | 36 | -0.7522 | -0.7522 | -0.7522 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69152183 | - | 36 | 0.8449 | 0.8449 | 0.8449 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69149984 | - | 37 | -0.9689 | -0.9689 | -0.9689 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69150063 | - | 37 | 0.9794 | 0.9794 | 0.9794 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69149033 | - | 38 | -0.9635 | -0.9635 | -0.9635 | 0.0000 | acceptor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69149088 | - | 38 | 0.9671 | 0.9671 | 0.9671 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| 69148925 | - | 39 | 0.6796 | 0.6796 | 0.6796 | 0.0000 | donor | a0001c0001t0002g0081 | NA18956.hp2 | NA18956.hp2 | ABCA10 | chr17 | 69143007 | 69233824 |
| pos | annotationhgvs_chgvs_p | clinvarid | clnsig | geneinfo | mc | clndisdb | strand strand
|
ahapid ahapid_count
|
chapid chapid count
|
thapid thapid_count
|
ghapid ghapid_count
|
AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
impact | chr | ref | alt | external |
|---|
| CHR:POS | annotationhgvs_chgvs_p | disease trait-log10podds or beta | AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
study | initial sample size/replication sample size | report genes | mapped gene | strongest snp risk allele | strand strand
|
impact | chr | ref | alt |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr17:69195129
|
c.1235-634G>C | Apolipoprotein B levels0.0278868 | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Evaluating the relationship between circulating li others(123): Show |
439,214 European ancestry individuals/ | ABCA10 | ABCA10 | rs72631343-C | - | MODIFIER | chr17 | C | G |
|
chr17:69195129
|
c.1235-634G>C | LDL cholesterol levels0.0292878 | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Evaluating the relationship between circulating li others(123): Show |
440,546 European ancestry individuals/ | ABCA10 | ABCA10 | rs72631343-C | - | MODIFIER | chr17 | C | G |
|
chr17:69228706
|
c.-438C>A | Paclitaxel disposition in epithelial ovarian cancerothers(16): Show | a0001a0002a0003a0004a0005others(20): Show | a0001c0001a0001c0034a0001c0035a0002c0002a0002c0015others(31): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0013a0001c0001t0017a0001c0001t0018others(40): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(315): Show | HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 others(321): Show |
Genome-wide association study of paclitaxel and ca others(62): Show |
66 European ancestry cases, 14 Asian ancestry case others(2): Show |
ABCA10 | ABCA10 | rs9302891-? | - | MODIFIER | chr17 | G | T |
|
chr17:69195129
|
c.1235-634G>C | Apolipoprotein B levels0.0385 | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Genetics of 35 blood and urine biomarkers in the U others(10): Show |
340,860 European ancestry individuals, 5,962 Afric others(64): Show |
NR | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G |
|
chr17:69195129
|
c.1235-634G>C | Total cholesterol levels0.0391 | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Genetics of 35 blood and urine biomarkers in the U others(10): Show |
342,508 European ancestry individuals, 6,014 Afric others(64): Show |
NR | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G |
|
chr17:69195129
|
c.1235-634G>C | Low density lipoprotein cholesterol levelsothers(8): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Genetics of 35 blood and urine biomarkers in the U others(10): Show |
341,875 European ancestry individuals, 6,003 Afric others(64): Show |
NR | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G |
|
chr17:69195129
|
c.1235-634G>C | Free cholesterol in medium VLDL (UKB data field 23507)others(23): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Cholesteryl esters in medium VLDL (UKB data field 23506)others(25): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Cholesterol in medium VLDL (UKB data field 23505)others(18): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Concentration of small LDL particles (UKB data field 23544)others(28): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Free cholesterol in very small VLDL (UKB data field 23521)others(27): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Concentration of IDL particles (UKB data field 23523)others(22): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C |
Phospholipids in IDL (UKB data field 23525) others(12): Show |
a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Concentration of very small VLDL particles (UKB data field 23516)others(34): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Cholesterol in very small VLDL (UKB data field 23519)others(22): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Phospholipids in very small VLDL (UKB data field 23518)others(23): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Total lipids in very small VLDL (UKB data field 23517)others(23): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Cholesteryl esters in very small VLDL (UKB data field 23520)others(29): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Total cholesterol minus HDL-C levels (UKB data field 23401)others(27): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | VLDL cholesterol levels (UKB data field 23403)others(15): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Remnant cholesterol (non-HDL, non-LDL -cholesterol) levels (UKB data field 23402)others(50): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Concentration of LDL particles (UKB data field 23429)others(22): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Apolipoprotein B levels (UKB data field 23439)others(14): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Cholesteryl esters in VLDL (UKB data field 23416)others(18): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Total free cholesterol levels (UKB data field 23419)others(21): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Concentration of large LDL particles (UKB data field 23530)others(28): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Cholesterol in small VLDL (UKB data field 23512)others(17): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Free cholesterol in small VLDL (UKB data field 23514)others(22): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69195129
|
c.1235-634G>C | Cholesteryl esters in small VLDL (UKB data field 23513)others(24): Show | a0001a0012a0014a0016a0017others(2): Show | a0001c0001a0001c0034a0001c0035a0012c0011a0014c0017others(4): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0013a0001c0034t0002a0001c0035t0002others(6): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(75): Show | HG00099.hp1 HG00280.hp2 HG00642.hp1 HG01109.hp1 HG01123.hp2 others(76): Show |
Metabolomic Investigation of Major Depressive Diso others(82): Show |
88,329 European ancestry individuals/ | ABCA10 | rs72631343-G | - | MODIFIER | chr17 | C | G | |
|
chr17:69192435
|
c.1871+128T>C | Corneal hysteresis0.119 | a0001a0002a0003a0004a0005others(20): Show | a0001c0001a0001c0034a0001c0035a0002c0002a0002c0015others(31): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008a0001c0001t0013a0001c0001t0017others(43): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(315): Show | HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 others(321): Show |
Genome-wide association study of corneal biomechan others(105): Show |
106,041 European ancestry individuals/9,029 Europe others(23): Show |
ABCA10 | ABCA10 | rs8070232-A | - | MODIFIER | chr17 | A | G |
|
chr17:69192435
|
c.1871+128T>C | Corneal resistance factor0.142 | a0001a0002a0003a0004a0005others(20): Show | a0001c0001a0001c0034a0001c0035a0002c0002a0002c0015others(31): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008a0001c0001t0013a0001c0001t0017others(43): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(315): Show | HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 others(321): Show |
Genome-wide association study of corneal biomechan others(105): Show |
106,030 European ancestry individuals/9,029 Europe others(23): Show |
ABCA10 | ABCA10 | rs8070232-A | - | MODIFIER | chr17 | A | G |
|
chr17:69154035
|
c.3787-26A>G | Hemoglobin concentration0.03001 | a0001a0002a0003a0004a0005others(21): Show | a0001c0001a0001c0034a0001c0035a0002c0002a0002c0015others(32): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008a0001c0001t0013a0001c0001t0017others(46): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(331): Show | HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 others(337): Show |
Common and Ethnic-Specific Genetic Determinants of others(145): Show |
52,141 European ancestry females/89,584 European a others(15): Show |
ABCA10 | rs2886232-T | - | MODIFIER | chr17 | T | C | |
|
chr17:69192435
|
c.1871+128T>C | Height0.0081 | a0001a0002a0003a0004a0005others(20): Show | a0001c0001a0001c0034a0001c0035a0002c0002a0002c0015others(31): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0008a0001c0001t0013a0001c0001t0017others(43): Show | a0001c0001t0002g0001a0001c0001t0002g0012a0001c0001t0002g0026a0001c0001t0002g0027a0001c0001t0002g0028others(315): Show | HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 others(321): Show |
A saturated map of common genetic variants associa others(22): Show |
5,314,291 European ancestry, Hispanic or Latin Ame others(79): Show |
ABCA10 | rs8070232-A | - | MODIFIER | chr17 | A | G |