Pfam Domain Viewer — APAF1 APAF1_chr12_98640290_98740433

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information
GeneAPAF1
NCBI Gene IDGeneID:317
HGNCHGNC:576
RefSeq ProteinNP_863651.1
Protein Length1248 aa
Haplotypes9
Distinct Architectures3
Ref (a0001) ArchitectureCARD_2(1-88)->CARD(6-89)->NB-ARC(130-304)->WHD_APAF1(378-445)->APAF1_C(453-587)->Beta-prop_WDR41(603-733)->Beta-prop_CAF1B_HIR1(606-694)->Beta-prop_TEP1_2nd(607-693)->WDR55(607-734)->WD40_Gbeta(608-778)->Beta-prop_WDR3_1st(610-771)->WD40_WDHD1_1st(610-698)->EIF3I(610-718)->Beta-prop_WDR35_TULP_N(610-826)->WD40(611-642)->Beta-prop_WDR5(612-781)->Beta-prop_WDR3_2nd(612-774)->WD40_MABP1-WDR62_1st(613-715)->Beta-prop_THOC3(614-706)->Beta-prop_NOL10_N(616-734)->Beta-prop_IFT122_1st(618-781)->WD40_MABP1-WDR62_2nd(618-714)->Beta-prop_ACSF4(621-781)->Beta-prop_RIG_2nd(624-719)->WD40_Prp19(625-735)->Beta-prop_WDR75_1st(625-695)->Beta-prop_EML_2(627-780)->Beta-prop_WDR90_POC16_2nd(628-909)->NBCH_WD40(629-688)->Beta-prop_WDR36-Utp21_1st(636-770)->Beta-prop_EIPR1(644-770)->WD40_CDC20-Fz(646-909)->WD40(648-685)->Beta-prop_TEP1_2nd(649-775)->WDR55(649-774)->WD40_RFWD3(653-729)->Beta-prop_WDR36-Utp21_2nd(654-776)->ANAPC4_WD40(654-708)->Beta-prop_EML(655-843)->WDR90_beta-prop_4th(664-742)->Beta-prop_WDR75_1st(665-730)->Beta-prop_WDR19_1st(668-775)->EIF3I(672-858)->WD40(689-729)->Beta-prop_HPS5(690-815)->Beta-prop_RIG_2nd(694-761)->Beta-prop_THOC3(698-955)->WD40_Prp19(702-940)->Beta-prop_Aladin(702-849)->WD40_WDHD1_1st(703-878)->Beta-prop_WDR75_1st(707-806)->Beta-prop_CAF1B_HIR1(709-871)->WDR90_beta-prop_4th(710-773)->WD40_MABP1-WDR62_2nd(715-770)->EIF3I(716-914)->WD40(734-771)->Beta-prop_NOL10_N(744-886)->Beta-prop_TEP1_2nd(755-914)->Beta-prop_EML_2(797-914)->Beta-prop_WDR3_1st(800-933)->Beta-prop_WDR5(801-953)->Beta-prop_WDR3_2nd(801-919)->WDR55(801-913)->WD40_Gbeta(801-912)->Beta-prop_WDR36-Utp21_2nd(815-914)->Beta-prop_EML(825-1037)->Beta-prop_IFT122_1st(844-1071)->WD40(875-909)->WD40_WDHD1_1st(886-1037)->Beta-prop_EML_2(886-1033)->WD40_MABP1-WDR62_2nd(895-991)->EIF3I(930-1031)->Beta-prop_VPS8(936-1025)->WD40_CDC20-Fz(938-1071)->Beta-prop_WDR3_2nd(945-1036)->Beta-prop_WDR36-Utp21_1st(945-1070)->Beta-prop_WDR90_POC16_2nd(957-1048)->Beta-prop_WDR3_1st(958-1113)->WD40_Prp19(960-1050)->Beta-prop_TEP1_2nd(960-1096)->WDR55(960-1084)->Beta-prop_WDR36-Utp21_2nd(960-1034)->Beta-prop_THOC3(961-1044)->Beta-prop_WDR5(962-1114)->NBCH_WD40(976-1034)->WD40(1001-1031)->Beta-prop_CAF1B_HIR1(1001-1113)->Beta-prop_THOC3(1002-1077)->WD40_CDC20-Fz(1002-1235)->Beta-prop_WDR75_1st(1011-1094)->Beta-prop_SCAP(1015-1163)->EIF3I(1036-1114)->Beta-prop_WDR3_2nd(1037-1158)->WD40_WDHD1_1st(1039-1084)->WD40_Prp19(1040-1216)->WD40_Gbeta(1041-1158)->WD40_MABP1-WDR62_2nd(1051-1158)->Beta-prop_TEP1_2nd(1053-1218)->Beta-prop_IFT122_1st(1055-1220)->Beta-prop_THOC3(1055-1163)->Beta-prop_EML_2(1056-1210)->Beta-prop_WDR36-Utp21_1st(1061-1197)->Beta-prop_WDR36-Utp21_2nd(1064-1240)->WD40(1079-1113)->WDR55(1081-1209)->WD40_WDHD1_1st(1087-1195)->Beta-prop_WDR90_POC16_2nd(1098-1196)->Beta-prop_WDR5(1102-1228)->ANAPC4_WD40(1110-1167)->Beta-prop_WDR75_1st(1113-1235)->WD40(1119-1155)->Beta-prop_WDR3_1st(1122-1235)->WD40_Gbeta(1122-1234)->Beta-prop_CAF1B_HIR1(1122-1213)->Beta-prop_EML(1129-1203)->WD40(1176-1203)->Beta-prop_WDR11_2nd(1196-1242)
Domain Architecture Diagram
Domain Differences vs Reference (a0001)
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details
Summary Statistics