Pfam Domain Viewer — COL12A1 COL12A1_chr6_75079326_75211053

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information ▼
GeneCOL12A1
NCBI Gene IDGeneID:1303
EnsemblENSG00000111799.22
HGNCHGNC:2188
RefSeq ProteinNP_004361.3
Protein Length3063 aa
Haplotypes30
Distinct Architectures1
Ref (a0001) Architecturefn3(26-107)->VWA(140-310)->VWA_2(141-251)->fn3(336-417)->VWA(440-608)->VWA_2(441-552)->fn3(634-710)->FN3_DSCAM-DSCAML_C(651-710)->fn3(725-793)->fn3(816-892)->FN3_DSCAM-DSCAML_C(833-906)->fn3(907-986)->fn3(1001-1077)->fn3(1089-1168)->VWA(1199-1369)->VWA_2(1200-1311)->fn3(1387-1468)->Pur_ac_phosph_N(1391-1457)->fn3(1479-1559)->Pur_ac_phosph_N(1480-1548)->fn3(1568-1647)->fn3(1657-1728)->fn3(1755-1832)->Pur_ac_phosph_N(1759-1824)->fn3(1846-1926)->fn3(1938-2017)->fn3(2027-2104)->fn3(2118-2193)->FN3_DSCAM-DSCAML_C(2135-2194)->fn3(2207-2278)->VWA(2323-2494)->VWA_2(2324-2435)->Collagen(2747-2798)->Collagen(2803-2855)->Collagen(2844-2896)->Collagen(2941-2990)->Collagen(2992-3042)
Domain Architecture Diagram ▼
Domain Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details ▼
Summary Statistics ▼