Pfam Domain Viewer — COPB2 COPB2_chr3_139352406_139394647

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information
GeneCOPB2
NCBI Gene IDGeneID:9276
HGNCHGNC:2232
RefSeq ProteinNP_004757.1
Protein Length906 aa
Haplotypes3
Distinct Architectures3
Ref (a0001) ArchitectureBeta-prop_WDR5(8-65)->Beta-prop_THOC3(9-114)->Beta-prop_WDR3_1st(10-154)->WD40_WDHD1_1st(10-55)->WD40_Gbeta(12-198)->EIF3I(13-114)->WD40_Prp19(15-131)->WDR55(16-198)->Beta-prop_IFT122_1st(18-131)->Beta-prop_EML_2(20-148)->Beta-prop_WDR3_2nd(29-287)->WD40_CDC20-Fz(31-230)->Beta-prop_TEP1_2nd(31-107)->Beta-prop_WDR36-Utp21_1st(32-128)->WD40_MABP1-WDR62_1st(49-175)->WD40_WDHD1_1st(57-132)->Beta-prop_WDR5(59-170)->WD40_MABP1-WDR62_2nd(62-167)->PEP5_VPS11_N(66-159)->Beta-prop_NOL10_N(67-253)->Beta-prop_WDR36-Utp21_2nd(69-175)->Beta-prop_WDR75_1st(79-128)->WD40(91-127)->Beta-prop_EIPR1(95-170)->Beta-prop_TEP1_2nd(96-172)->Beta-prop_TEP1_2nd(114-259)->Beta-prop_THOC3(115-193)->Beta-prop_WDR3_1st(131-294)->WD40(132-170)->Beta-prop_IFT122_1st(133-172)->Beta-prop_WDR75_1st(134-171)->WD40_Prp19(135-271)->WD40_WDHD1_1st(135-186)->Beta-prop_WDR41(136-281)->Beta-prop_RIG_2nd(139-247)->Beta-prop_EML_2(152-239)->WD40_MABP1-WDR62_2nd(153-237)->Beta-prop_WDR5(154-281)->WDR55(154-296)->Beta-prop_SCAP(160-260)->Beta-prop_EML(163-241)->Beta-prop_WDR36-Utp21_1st(176-256)->WD40(177-215)->Beta-prop_IFT122_1st(179-317)->Beta-prop_THOC3(179-269)->EIF3I(180-263)->Beta-prop_EIPR1(180-256)->Beta-prop_CAF1B_HIR1(181-265)->WD40_MABP1-WDR62_1st(184-257)->WD40_WDHD1_1st(198-268)->WD40_Gbeta(198-276)->NBCH_WD40(199-262)->Beta-prop_WDR75_1st(201-257)->Beta-prop_WDR36-Utp21_2nd(206-260)->Beta-prop_WDR90_POC16_2nd(206-257)->WD40(220-256)->WD40_CDC20-Fz(228-303)->Beta-prop_EML_2(236-298)->B-prop_COPA_B_2nd(319-577)->TPR_COPA_B(594-774)
Domain Architecture Diagram
Domain Differences vs Reference (a0001)
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details
Summary Statistics