Pfam Domain Viewer — LDLR LDLR_chr19_11084463_11138820

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information ▼
GeneLDLR
NCBI Gene IDGeneID:3949
EnsemblENSG00000130164.15
HGNCHGNC:6547
RefSeq ProteinNP_000518.1
Protein Length860 aa
Haplotypes6
Distinct Architectures2
Ref (a0001) ArchitectureLdl_recept_a(26-63)->Ldl_recept_a(67-104)->Ldl_recept_a(107-143)->Ldl_recept_a(147-184)->Ldl_recept_a(196-231)->Ldl_recept_a(235-270)->Ldl_recept_a(276-313)->FXa_inhibition(318-348)->cEGF(335-357)->EGF_CA(354-392)->FXa_inhibition(360-392)->cEGF(374-393)->Ldl_recept_b(439-483)->Ldl_recept_b(487-526)->Ldl_recept_b(529-569)->Ldl_recept_b(573-614)->Ldl_recept_b(616-656)->FXa_inhibition(673-711)->cEGF(694-711)
Domain Architecture Diagram ▼
Domain Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details ▼
Summary Statistics ▼