Pfam Domain Viewer — PCDH1 PCDH1_chr5_141848090_141883410

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information ▼

GenePCDH1

NCBI Gene IDGeneID:5097

EnsemblENSG00000156453.14

HGNCHGNC:8655

RefSeq ProteinNP_115796.2

Protein Length1237 aa

Haplotypes14

Distinct Architectures1

Ref (a0001) ArchitectureCadherin_FAT4_N(58-122)->Cadherin_2(61-140)->Cadherin(175-271)->Cadherin(285-377)->Cadherin(402-496)->Ig_CLSTN(435-498)->Cadherin_CELSR2_9th(498-586)->Ig_Cad99C_N(508-606)->Cadherin(513-603)->Cadherin_FAT4_N(552-584)->Ig_CLSTN(607-707)->Cadherin(617-706)->Cadherin(731-812)->Protocadherin(815-1029)

Domain Architecture Diagram ▼

Domain Differences vs Reference (a0001) ▼

Haplotype ▲▼	Diff Type ▲▼	Pfam Acc ▲▼	Domain Name ▲▼	Ref Coords ▲▼	Alt Coords ▲▼	Ref Score ▲▼	Alt Score ▲▼

Haplotype Domain Details ▼

Summary Statistics ▼