Pfam Domain Viewer — PRDM9 PRDM9_chr5_23502609_23533093

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information
GenePRDM9
NCBI Gene IDGeneID:56979
HGNCHGNC:13994
RefSeq ProteinNP_064612.2
Protein Length894 aa
Haplotypes49
Distinct Architectures35
Ref (a0001) ArchitectureKRAB(28-62)->SSXRD(171-201)->PRDM2_PR(248-367)->SET(301-358)->zf-C2H2_5(387-408)->zf-H2C2_2(541-562)->zf-C2H2(552-574)->zf-C2H2_15(554-578)->zf-H2C2_2(570-590)->zf-C2H2(580-602)->zf-H2C2_2(597-619)->zf-C2H2(608-630)->zf-C2H2_4(608-630)->zf-C2H2_15(610-634)->zf-H2C2_2(625-647)->zf-C2H2(636-658)->zf-C2H2_4(636-658)->zf-C2H2_15(638-662)->zf-H2C2_2(653-674)->zf-C2H2(664-686)->zf-H2C2_2(681-702)->zf-C2H2(692-714)->zf-H2C2_2(709-730)->zf-C2H2(720-742)->zf-C2H2_4(720-742)->zf-C2H2_15(722-746)->zf-H2C2_2(737-757)->zf-C2H2(748-770)->zf-C2H2_4(748-770)->zf-C2H2_15(750-774)->zf-H2C2_2(765-785)->zf-C2H2(776-798)->zf-C2H2_4(776-798)->zf-C2H2_15(778-802)->zf-H2C2_2(793-814)->zf-C2H2(804-826)->zf-C2H2_4(804-826)->zf-C2H2_15(806-830)->zf-H2C2_2(821-842)->zf-C2H2(832-854)->zf-C2H2_4(832-854)->zf-C2H2_15(834-858)->zf-H2C2_2(849-870)->zf-C2H2(860-882)->zf-C2H2_4(860-882)->zf-H2C2_2(877-891)
Domain Architecture Diagram
Domain Differences vs Reference (a0001)
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details
Summary Statistics