Pfam Domain Viewer — RELN RELN_chr7_103466789_103994658

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information
GeneRELN
NCBI Gene IDGeneID:5649
HGNCHGNC:9957
RefSeq ProteinNP_005036.2
Protein Length3460 aa
Haplotypes35
Distinct Architectures3
Ref (a0001) ArchitectureReeler(60-170)->Reelin_subrepeat-B(226-350)->Reelin_subrepeat-B(435-556)->Reelin_subrepeat-B(567-671)->EGF_TEN(674-703)->EGF_Teneurin(677-702)->EGF_2(677-700)->Reelin_subrepeat-B(731-861)->Reelin_subrepeat-B(888-1030)->EGF_TEN(1031-1061)->EGF_Teneurin(1033-1060)->EGF_2(1033-1059)->Reelin_subrepeat-B(1094-1219)->Reelin_subrepeat-B(1266-1409)->EGF_TEN(1411-1437)->EGF_Teneurin(1412-1434)->Reelin_subrepeat-B(1467-1597)->Reelin_subrepeat-B(1625-1764)->EGF_TEN(1767-1794)->EGF_Teneurin(1768-1794)->EGF_2(1772-1794)->Reelin_subrepeat-B(1831-1946)->Reelin_subrepeat-B(1975-2129)->EGF_TEN(2131-2161)->EGF_Teneurin(2132-2161)->EGF_2(2132-2159)->Reelin_subrepeat-B(2187-2314)->Reelin_subrepeat-B(2340-2478)->EGF_Teneurin(2481-2509)->EGF_TEN(2481-2524)->EGF_2(2485-2507)->Reelin_subrepeat-B(2536-2661)->Reelin_subrepeat-B(2719-2853)->EGF_Teneurin(2856-2882)->EGF_2(2856-2882)->EGF_TEN(2859-2884)->Reelin_subrepeat-B(2911-3049)->Reelin_subrepeat-B(3103-3228)->EGF_TEN(3229-3264)->EGF_Teneurin(3231-3260)->EGF_2(3231-3258)->EGF_Tenascin(3231-3259)->Reelin_subrepeat-B(3288-3425)
Domain Architecture Diagram
Domain Differences vs Reference (a0001)
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details
Summary Statistics