Pfam Domain Viewer — SCN1A SCN1A_chr2_165980813_166133020

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information ▼

GeneSCN1A

NCBI Gene IDGeneID:6323

EnsemblENSG00000144285.23

HGNCHGNC:10585

RefSeq ProteinNP_001159435.1

Protein Length2009 aa

Haplotypes11

Distinct Architectures2

Ref (a0001) ArchitectureIon_trans(127-432)->Na_trans_cytopl(555-718)->Ion_trans(768-998)->PKD_channel(861-996)->Na_trans_assoc(1006-1213)->Ion_trans(1217-1492)->Ion_trans(1541-1796)->PKD_channel(1645-1790)->IQ_SCN5A_C(1908-1941)

Domain Architecture Diagram ▼

Domain Differences vs Reference (a0001) ▼

Haplotype ▲▼	Diff Type ▲▼	Pfam Acc ▲▼	Domain Name ▲▼	Ref Coords ▲▼	Alt Coords ▲▼	Ref Score ▲▼	Alt Score ▲▼

Haplotype Domain Details ▼

Summary Statistics ▼