Pfam Domain Viewer — SLIT1 SLIT1_chr10_96993038_97190959

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information
GeneSLIT1
NCBI Gene IDGeneID:6585
HGNCHGNC:11085
RefSeq ProteinNP_003052.2
Protein Length1534 aa
Haplotypes7
Distinct Architectures4
Ref (a0001) ArchitectureLRRNT(33-60)->LRR_8(62-121)->LRR_5(66-164)->LRR_14(83-239)->LRR_8(110-169)->LRR_5(129-215)->LRR_8(159-217)->LRR_4(183-216)->LRRCT(240-264)->LRRNT(282-308)->LRR_8(311-369)->LRR_5(321-427)->LRR_4(334-372)->LRR_14(334-431)->LRR_8(357-412)->LRR_9(380-441)->LRR_8(383-440)->LRRCT(464-488)->LRRNT(513-539)->LRR_8(543-601)->LRR_4(544-582)->LRR_5(560-669)->LRR_8(590-649)->LRR_8(614-672)->LRR_4(638-672)->LRRCT(695-720)->LRRNT(733-760)->LRR_4(761-801)->LRR_8(762-820)->LRR_9(765-873)->LRR_14(767-861)->LRR_5(793-863)->LRR_8(809-868)->LRR_4(809-848)->EGF(929-959)->EGF_TEN(931-1051)->hEGF(934-956)->EGF(968-1001)->EGF(1009-1038)->hEGF(1014-1032)->EGF(1047-1079)->EGF_TEN(1053-1165)->hEGF(1054-1075)->EGF(1087-1116)->hEGF(1092-1113)->EGF(1131-1160)->hEGF(1136-1157)->Laminin_G_1(1194-1324)->Laminin_G_2(1195-1322)->EGF_TEN(1356-1500)->EGF(1381-1410)
Domain Architecture Diagram
Domain Differences vs Reference (a0001)
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details
Summary Statistics