Pfam Domain Viewer — SYNE1 SYNE1_chr6_152116687_152642362

Per-haplotype Pfam domain annotations from JoGo haplotype-resolved proteome

Gene Information
GeneSYNE1
NCBI Gene IDGeneID:23345
HGNCHGNC:17089
RefSeq ProteinNP_892006.3
Protein Length975 aa
Haplotypes133 (capped)
Distinct Architectures6
Ref (a0001) ArchitectureCH(29-134)->SR_desmoplakin_3(31-107)->Spectrin(42-151)->Spectrin_SYNE1(118-182)->Spectrin(155-253)->CH(180-283)->Spectrin_SYNE1(202-362)->Spectrin(266-365)->SYNE1(368-474)->Spectrin_SYNE1(515-702)->Spectrin(618-725)->SR_desmoplakin_3(699-774)->KASH(918-974)->Spectrin_SYNE1(1384-1489)->Spectrin_SYNE1(1598-1683)->Spectrin(1656-1761)->Spectrin(1982-2078)->Spectrin(2311-2405)->Spectrin(2411-2512)->Spectrin(2519-2615)->Spectrin_SYNE1(2694-2760)->Spectrin_SYNE1_2(2955-3057)->Spectrin(3066-3170)->Spectrin_SYNE1(3136-3219)->SR_desmoplakin_3(3144-3240)->Spectrin(3175-3276)->Spectrin(3283-3385)->Spectrin_SYNE1(3355-3437)->Spectrin(3599-3701)->Spectrin_SYNE1(3779-3860)->Spectrin(3817-3913)->Spectrin(3924-4032)->Spectrin(4261-4337)->Spectrin(4350-4449)->Spectrin(4458-4558)->SR_desmoplakin_3(4751-4838)->Spectrin(5102-5208)->Spectrin_SYNE1(5117-5243)->Spectrin(5739-5831)->Spectrin(5964-6070)->Spectrin_SYNE1(6735-6841)->Spectrin(6796-6904)->Spectrin(6915-7018)->Spectrin_SYNE1(6982-7052)->Spectrin(7024-7118)->Spectrin_SYNE1(7051-7229)->Spectrin(7140-7230)->Spectrin(7353-7452)->Spectrin(7457-7555)->Spectrin_SYNE1(7524-7581)->Spectrin(7675-7776)->Spectrin_SYNE1(7734-7870)->SR_desmoplakin_3(7746-7838)->Spectrin(7782-7882)->SR_desmoplakin_3(7860-7952)->Spectrin(7887-7996)->Spectrin_SYNE1(7962-8028)->Spectrin(8000-8098)->Spectrin_SYNE1(8047-8207)->Spectrin(8111-8210)->SYNE1(8213-8319)->Spectrin(8440-8547)->KASH(8740-8796)
Domain Architecture Diagram
Domain Differences vs Reference (a0001)
Haplotype ▲▼ Diff Type ▲▼ Pfam Acc ▲▼ Domain Name ▲▼ Ref Coords ▲▼ Alt Coords ▲▼ Ref Score ▲▼ Alt Score ▲▼
Haplotype Domain Details
Summary Statistics