deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolSCN3A

Gene Namesodium voltage-gated channel alpha subunit 3

NCBI Gene IDGeneID:6328

EnsemblENSG00000153253.20

HGNCHGNC:10590

RefSeq ProteinNP_008853.3

Protein Length (ref)2000 aa

Haplotypes13

TM Helices (ref)24

Distinct Topologies4

Ref (a0001) TopologyTMhelix(129-147)->TMhelix(161-174)->TMhelix(192-207)->TMhelix(209-218)->TMhelix(250-270)->TMhelix(401-419)->TMhelix(761-779)->TMhelix(791-812)->TMhelix(826-839)->TMhelix(841-850)->TMhelix(882-901)->TMhelix(961-979)->TMhelix(1207-1225)->TMhelix(1243-1253)->TMhelix(1255-1264)->TMhelix(1277-1292)->TMhelix(1335-1352)->TMhelix(1446-1464)->TMhelix(1527-1545)->TMhelix(1561-1578)->TMhelix(1590-1599)->TMhelix(1601-1610)->TMhelix(1654-1674)->TMhelix(1746-1766)

Genomic Regionchr2: 165082526-165209050

deepTMHMM Topology Viewer — SCN3A SCN3A_chr2_165082526_165209050