Joint Open Genome and Omics Platform (JoGo)

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geneid	3113
ensemblid	ENSG00000231389.8
hgncid	4938
symbol	HLA-DPA1
name	major histocompatibility complex, class II, DP alpha 1
refseq_nuc	NM_033554.4
refseq_prot	NP_291032.2
ensembl_nuc	ENST00000692443.1
ensembl_prot	ENSP00000509163.1
mane_status	MANE Select
chr	chr6
start	33064569
end	33073649
strand	-
ver	v1.2
region	chr6:33064569-33073649
region5000	chr6:33059569-33078649
regionname0	HLA-DPA1_chr6_33064569_33073649
regionname5000	HLA-DPA1_chr6_33059569_33078649

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/1	260	91	9	36	24	10	11	24	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0002	0/0	260	13	9	4	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0003	0/0	260	1	0	0	0	0	1	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	783	90	9	36	24	10	10	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
c0002	0/0	783	11	8	3	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
c0003	0/0	783	2	1	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
c0004	0/0	783	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
c0005	0/0	783	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	871	51	3	26	9	7	5	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0002	0/0	871	26	1	10	9	2	4	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0003	0/0	882	11	8	3	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0004	0/0	871	6	0	0	6	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0005	0/0	871	4	4	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0006	0/0	871	2	1	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0007	0/0	871	2	1	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0008	0/0	871	1	0	0	0	1	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0009	0/0	871	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
t0010	0/0	871	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	24	1	9	9	2	3	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0002	0/0	23	0	12	8	1	2	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0003	0/1	12	1	7	0	3	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0004	0/0	8	0	4	0	1	3	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0005	0/0	6	0	0	6	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0006	0/0	5	4	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0007	0/0	5	0	2	1	2	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0008	0/0	4	4	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0009	0/0	2	0	2	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0010	0/0	2	2	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0011	0/0	2	1	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0012	0/0	2	1	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0013	0/0	2	2	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0014	0/0	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0015	0/0	1	1	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0016	0/0	1	0	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0017	0/0	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0018	0/0	1	0	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0019	0/0	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0020	0/0	1	1	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
g0021	0/0	1	0	0	0	1	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	783	90	9	36	24	10	10	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0004	0/0	783	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0002c0002	0/0	783	11	8	3	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0002c0003	0/0	783	2	1	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0003c0005	0/0	783	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	1653	51	3	26	9	7	5	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0001t0002	0/0	1653	25	1	10	9	2	3	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0001t0004	0/0	1653	6	0	0	6	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0001t0005	0/0	1653	4	4	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0001t0007	0/0	1653	2	1	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0001t0008	0/0	1653	1	0	0	0	1	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0001t0010	0/0	1653	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0001c0004t0002	0/0	1653	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0002c0002t0003	0/0	1664	11	8	3	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0002c0003t0006	0/0	1653	2	1	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649
a0003c0005t0009	0/0	1653	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	copy fasta	chr6	33059569	33078649

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	0/0	23	0	12	8	1	2	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0001g0003	0/1	12	1	7	0	3	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0001g0004	0/0	8	0	4	0	1	3	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0001g0007	0/0	5	0	2	1	2	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0001g0013	0/0	2	2	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0001g0016	0/0	1	0	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0002g0001	0/0	24	1	9	9	2	3	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0002g0018	0/0	1	0	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0004g0005	0/0	6	0	0	6	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0005g0008	0/0	4	4	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0007g0012	0/0	2	1	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0008g0021	0/0	1	0	0	0	1	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0001t0010g0019	0/0	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0001c0004t0002g0017	0/0	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0002c0002t0003g0006	0/0	5	4	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0002c0002t0003g0009	0/0	2	0	2	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0002c0002t0003g0010	0/0	2	2	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0002c0002t0003g0015	0/0	1	1	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0002c0002t0003g0020	0/0	1	1	0	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0002c0003t0006g0011	0/0	2	1	1	0	0	0	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
a0003c0005t0009g0014	0/0	1	0	0	0	0	1	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0008	g0021	EUR	GBR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00140	hp2	a0001	c0001	t0001	g0003	EUR	GBR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00323	hp1	a0001	c0001	t0001	g0007	EUR	FIN	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00323	hp2	a0001	c0001	t0001	g0003	EUR	FIN	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00639	hp1	a0001	c0001	t0002	g0001	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00639	hp2	a0001	c0001	t0001	g0003	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00642	hp1	a0001	c0001	t0002	g0001	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00642	hp2	a0002	c0002	t0003	g0009	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00735	hp1	a0001	c0001	t0001	g0002	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00735	hp2	a0001	c0001	t0001	g0016	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00738	hp1	a0001	c0001	t0001	g0002	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG00738	hp2	a0001	c0001	t0001	g0003	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01071	hp1	a0001	c0001	t0001	g0003	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01071	hp2	a0001	c0001	t0001	g0004	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01081	hp1	a0002	c0002	t0003	g0009	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01081	hp2	a0001	c0001	t0001	g0004	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01167	hp1	a0001	c0001	t0001	g0007	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01167	hp2	a0001	c0001	t0001	g0004	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01175	hp1	a0001	c0001	t0001	g0002	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01175	hp2	a0001	c0001	t0001	g0003	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01192	hp1	a0001	c0001	t0002	g0001	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01192	hp2	a0002	c0003	t0006	g0011	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01243	hp2	a0002	c0002	t0003	g0006	AMR	PUR	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01255	hp1	a0001	c0001	t0002	g0001	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01255	hp2	a0001	c0001	t0001	g0003	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01257	hp1	a0001	c0001	t0001	g0002	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01257	hp2	a0001	c0001	t0002	g0001	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01258	hp2	a0001	c0001	t0001	g0003	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01346	hp1	a0001	c0001	t0002	g0001	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01346	hp2	a0001	c0001	t0001	g0003	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01433	hp1	a0001	c0001	t0001	g0002	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01433	hp2	a0001	c0001	t0001	g0004	AMR	CLM	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01515	hp1	a0001	c0001	t0001	g0003	EUR	IBS	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01515	hp2	a0001	c0001	t0001	g0002	EUR	IBS	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01884	hp1	a0001	c0001	t0005	g0008	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01884	hp2	a0001	c0001	t0007	g0012	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01928	hp1	a0001	c0001	t0002	g0001	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01928	hp2	a0001	c0001	t0001	g0002	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01943	hp2	a0001	c0001	t0002	g0001	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01952	hp2	a0001	c0001	t0002	g0018	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01981	hp1	a0001	c0001	t0001	g0007	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG01981	hp2	a0001	c0001	t0001	g0002	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02148	hp1	a0001	c0001	t0002	g0001	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02148	hp2	a0001	c0001	t0001	g0002	AMR	PEL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02258	hp1	a0002	c0002	t0003	g0020	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02258	hp2	a0002	c0002	t0003	g0006	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02280	hp1	a0002	c0002	t0003	g0006	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02280	hp2	a0001	c0001	t0001	g0013	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02451	hp1	a0001	c0001	t0001	g0013	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02451	hp2	a0001	c0001	t0005	g0008	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02602	hp1	a0001	c0004	t0002	g0017	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02602	hp2	a0001	c0001	t0002	g0001	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02735	hp1	a0001	c0001	t0001	g0004	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02735	hp2	a0001	c0001	t0007	g0012	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02886	hp1	a0001	c0001	t0005	g0008	AFR	GWD	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02886	hp2	a0002	c0003	t0006	g0011	AFR	GWD	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03491	hp1	a0003	c0005	t0009	g0014	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03491	hp2	a0001	c0001	t0001	g0004	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03516	hp1	a0002	c0002	t0003	g0010	AFR	ESN	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03516	hp2	a0001	c0001	t0005	g0008	AFR	ESN	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03710	hp1	a0001	c0001	t0010	g0019	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03710	hp2	a0001	c0001	t0001	g0002	SAS	PJL	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03927	hp1	a0001	c0001	t0001	g0002	SAS	BEB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03927	hp2	a0001	c0001	t0002	g0001	SAS	BEB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03942	hp1	a0001	c0001	t0001	g0004	SAS	BEB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG03942	hp2	a0001	c0001	t0002	g0001	SAS	BEB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18940	hp1	a0001	c0001	t0004	g0005	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18940	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18949	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18949	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18963	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18963	hp2	a0001	c0001	t0004	g0005	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18974	hp1	a0001	c0001	t0004	g0005	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18974	hp2	a0001	c0001	t0004	g0005	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18975	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18975	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18984	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18984	hp2	a0001	c0001	t0001	g0007	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18988	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18988	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18991	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18991	hp2	a0001	c0001	t0004	g0005	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18994	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA18994	hp2	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19011	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19011	hp2	a0001	c0001	t0004	g0005	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19030	hp1	a0002	c0002	t0003	g0006	AFR	LWK	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19030	hp2	a0002	c0002	t0003	g0015	AFR	LWK	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19065	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19065	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19085	hp1	a0001	c0001	t0002	g0001	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA19085	hp2	a0001	c0001	t0001	g0002	EAS	JPT	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA20752	hp1	a0001	c0001	t0002	g0001	EUR	TSI	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA20752	hp2	a0001	c0001	t0001	g0007	EUR	TSI	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA20805	hp1	a0001	c0001	t0002	g0001	EUR	TSI	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA20805	hp2	a0001	c0001	t0001	g0004	EUR	TSI	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02559	hp1	a0001	c0001	t0001	g0003	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
HG02559	hp2	a0002	c0002	t0003	g0006	AFR	ACB	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA21309	hp1	a0002	c0002	t0003	g0010	AFR	LWK	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
NA21309	hp2	a0001	c0001	t0002	g0001	AFR	LWK	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0003	REF	REF	HLA-DPA1_chr6_33059569_33078649	HLA-DPA1	chr6	33059569	33078649

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr6:33069697	A A	G G	1	a0002 a0002	13	HG00642.hp2 HG01081.hp1 HG01192.hp2 others(10): Show HG00642.hp2 HG01081.hp1 HG01192.hp2 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG02886.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	missense_variant	MODERATE	c.290T>C c.290T>C	p.Leu97Ser p.Leu97Ser	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	2/5	369/1653	290/783	97/260	chr6	33069697
chr6:33069810	T T	G G	1	a0003 a0003	1	HG03491.hp1 HG03491.hp1	missense_variant	MODERATE	c.177A>C c.177A>C	p.Glu59Asp p.Glu59Asp	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	2/5	256/1653	177/783	59/260	chr6	33069810
chr6:33069862	G G	A A	1	a0002 a0002	13	HG00642.hp2 HG01081.hp1 HG01192.hp2 others(10): Show HG00642.hp2 HG01081.hp1 HG01192.hp2 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG02886.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	missense_variant	MODERATE	c.125C>T c.125C>T	p.Ala42Val p.Ala42Val	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	2/5	204/1653	125/783	42/260	chr6	33069862
chr6:33069863	C C	T T	1	a0002 a0002	13	HG00642.hp2 HG01081.hp1 HG01192.hp2 others(10): Show HG00642.hp2 HG01081.hp1 HG01192.hp2 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG02886.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	missense_variant	MODERATE	c.124G>A c.124G>A	p.Ala42Thr p.Ala42Thr	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	2/5	203/1653	124/783	42/260	chr6	33069863

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr6:33068728	G G	C C	1	a0002c0002 a0002c0002	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	synonymous_variant	LOW	c.705C>G c.705C>G	p.Val235Val p.Val235Val	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/5	784/1653	705/783	235/260	chr6	33068728
chr6:33069128	A A	G G	1	a0001c0004 a0001c0004	1	HG02602.hp1 HG02602.hp1	synonymous_variant	LOW	c.519T>C c.519T>C	p.Asp173Asp p.Asp173Asp	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	3/5	598/1653	519/783	173/260	chr6	33069128
chr6:33069849	C C	G G	2	a0002c0002 a0002c0003 a0002c0002 a0002c0003	13	HG00642.hp2 HG01081.hp1 HG01192.hp2 others(10): Show HG00642.hp2 HG01081.hp1 HG01192.hp2 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG02886.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	synonymous_variant	LOW	c.138G>C c.138G>C	p.Thr46Thr p.Thr46Thr	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	2/5	217/1653	138/783	46/260	chr6	33069849

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr6:33064586	T T	A A	5	a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0004t0002 a0002c0003t0006	35	HG00639.hp1 HG00642.hp1 HG01192.hp1 others(32): Show HG00639.hp1 HG00642.hp1 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp2 HG02148.hp1 HG02602.hp1 HG02602.hp2 HG02886.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18949.hp1 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA19011.hp2 NA19065.hp1 NA19085.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.774A>T c.774A>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	4064	chr6	33064586
chr6:33064613	T T	C C	1	a0002c0002t0003 a0002c0002t0003	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.747A>G c.747A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	4037	chr6	33064613
chr6:33064622	A A	G G	1	a0001c0001t0010 a0001c0001t0010	1	HG03710.hp1 HG03710.hp1	3_prime_UTR_variant	MODIFIER	c.738T>C c.738T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	4028	chr6	33064622
chr6:33064850	A A	G G	1	a0001c0001t0007 a0001c0001t0007	2	HG01884.hp2 HG02735.hp2 HG01884.hp2 HG02735.hp2	3_prime_UTR_variant	MODIFIER	c.510T>C c.510T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	3800	chr6	33064850
chr6:33065011	C C	T T	1	a0001c0001t0004 a0001c0001t0004	6	NA18940.hp1 NA18963.hp2 NA18974.hp1 others(3): Show NA18940.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18991.hp2 NA19011.hp2	3_prime_UTR_variant	MODIFIER	c.349G>A c.349G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	3639	chr6	33065011
chr6:33065067	T T	A A	1	a0003c0005t0009 a0003c0005t0009	1	HG03491.hp1 HG03491.hp1	3_prime_UTR_variant	MODIFIER	c.293A>T c.293A>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	3583	chr6	33065067
chr6:33065074	T T	C C	7	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(4): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0010 a0001c0004t0002 a0002c0002t0003 a0002c0003t0006	50	HG00639.hp1 HG00642.hp1 HG00642.hp2 others(47): Show HG00639.hp1 HG00642.hp1 HG00642.hp2 HG01081.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01884.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02886.hp1 HG02886.hp2 HG03516.hp1 HG03516.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18949.hp1 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19065.hp1 NA19085.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.286A>G c.286A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	3576	chr6	33065074
chr6:33065076	C C	T T	1	a0002c0003t0006 a0002c0003t0006	2	HG01192.hp2 HG02886.hp2 HG01192.hp2 HG02886.hp2	3_prime_UTR_variant	MODIFIER	c.284G>A c.284G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	3574	chr6	33065076
chr6:33065143	G G	GTCAACAT others(4): Show GTCAACATTTAT	1	a0002c0002t0003 a0002c0002t0003	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.216_217insATAAAT others(5): Show c.216_217insATAAATGTTGA	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	5/5	3506	chr6	33065143
chr6:33068642	A A	G G	1	a0001c0001t0008 a0001c0001t0008	1	HG00140.hp1 HG00140.hp1	3_prime_UTR_variant	MODIFIER	c.8T>C c.8T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/5	8	chr6	33068642

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr6:33065428	C C	T T	1	a0002c0002t0003g0015 a0002c0002t0003g0015	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.13-81G>A c.13-81G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33065428
chr6:33065497	T T	C C	12	a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 others(9): Show a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 a0001c0001t0005g0008 a0001c0001t0010g0019 a0001c0004t0002g0017 a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020 a0002c0003t0006g0011	50	HG00639.hp1 HG00642.hp1 HG00642.hp2 others(47): Show HG00639.hp1 HG00642.hp1 HG00642.hp2 HG01081.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01884.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02886.hp1 HG02886.hp2 HG03516.hp1 HG03516.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18949.hp1 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19065.hp1 NA19085.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.13-150A>G c.13-150A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33065497
chr6:33065574	G G	T T	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.13-227C>A c.13-227C>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33065574
chr6:33065657	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.13-310T>C c.13-310T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33065657
chr6:33065660	C C	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.13-313G>C c.13-313G>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33065660
chr6:33065961	C C	T T	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.13-614G>A c.13-614G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33065961
chr6:33065985	A A	G G	1	a0002c0003t0006g0011 a0002c0003t0006g0011	2	HG01192.hp2 HG02886.hp2 HG01192.hp2 HG02886.hp2	intron_variant	MODIFIER	c.13-638T>C c.13-638T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33065985
chr6:33066037	G G	A A	18	a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0016 others(15): Show a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 a0001c0001t0005g0008 a0001c0001t0007g0012 a0001c0001t0008g0021 a0001c0001t0010g0019 a0001c0004t0002g0017 a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020 a0002c0003t0006g0011 a0003c0005t0009g0014	80	HG00140.hp1 HG00639.hp1 HG00642.hp1 others(77): Show HG00140.hp1 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01981.hp2 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02735.hp2 HG02886.hp1 HG02886.hp2 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03710.hp1 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18940.hp2 NA18949.hp1 NA18949.hp2 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18994.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19065.hp1 NA19065.hp2 NA19085.hp1 NA19085.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.13-690C>T c.13-690C>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066037
chr6:33066336	T T	C C	2	a0002c0002t0003g0010 a0002c0002t0003g0020 a0002c0002t0003g0010 a0002c0002t0003g0020	3	HG02258.hp1 HG03516.hp1 NA21309.hp1 HG02258.hp1 HG03516.hp1 NA21309.hp1	intron_variant	MODIFIER	c.13-989A>G c.13-989A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066336
chr6:33066337	A A	G G	1	a0001c0001t0007g0012 a0001c0001t0007g0012	2	HG01884.hp2 HG02735.hp2 HG01884.hp2 HG02735.hp2	intron_variant	MODIFIER	c.13-990T>C c.13-990T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066337
chr6:33066400	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.13-1053T>C c.13-1053T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066400
chr6:33066464	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.13-1117T>C c.13-1117T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066464
chr6:33066522	G G	A A	1	a0003c0005t0009g0014 a0003c0005t0009g0014	1	HG03491.hp1 HG03491.hp1	intron_variant	MODIFIER	c.13-1175C>T c.13-1175C>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066522
chr6:33066622	C C	A A	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.13-1275G>T c.13-1275G>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066622
chr6:33066819	G G	A A	12	a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 others(9): Show a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 a0001c0001t0005g0008 a0001c0001t0010g0019 a0001c0004t0002g0017 a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020 a0002c0003t0006g0011	50	HG00639.hp1 HG00642.hp1 HG00642.hp2 others(47): Show HG00639.hp1 HG00642.hp1 HG00642.hp2 HG01081.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01884.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02886.hp1 HG02886.hp2 HG03516.hp1 HG03516.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18949.hp1 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19065.hp1 NA19085.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.13-1472C>T c.13-1472C>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066819
chr6:33066847	C C	A A	1	a0002c0002t0003g0009 a0002c0002t0003g0009	2	HG00642.hp2 HG01081.hp1 HG00642.hp2 HG01081.hp1	intron_variant	MODIFIER	c.13-1500G>T c.13-1500G>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33066847
chr6:33067008	G G	A A	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+1630C>T c.12+1630C>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067008
chr6:33067038	G G	A A	2	a0001c0001t0001g0002 a0001c0001t0008g0021 a0001c0001t0001g0002 a0001c0001t0008g0021	24	HG00140.hp1 HG00735.hp1 HG00738.hp1 others(21): Show HG00140.hp1 HG00735.hp1 HG00738.hp1 HG01175.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01433.hp1 HG01515.hp2 HG01928.hp2 HG01943.hp1 HG01952.hp1 HG01981.hp2 HG02148.hp2 HG03710.hp2 HG03927.hp1 NA18940.hp2 NA18949.hp2 NA18975.hp1 NA18988.hp2 NA18994.hp1 NA19011.hp1 NA19065.hp2 NA19085.hp2	intron_variant	MODIFIER	c.12+1600C>T c.12+1600C>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067038
chr6:33067099	T T	C C	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+1539A>G c.12+1539A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067099
chr6:33067172	G G	C C	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+1466C>G c.12+1466C>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067172
chr6:33067215	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+1423T>C c.12+1423T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067215
chr6:33067327	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+1311T>C c.12+1311T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067327
chr6:33067453	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+1185T>C c.12+1185T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067453
chr6:33067552	C C	T T	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+1086G>A c.12+1086G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067552
chr6:33067885	T T	C C	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+753A>G c.12+753A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067885
chr6:33067915	T T	C C	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+723A>G c.12+723A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33067915
chr6:33068057	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+581T>C c.12+581T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068057
chr6:33068083	G G	A A	2	a0001c0001t0001g0002 a0001c0001t0008g0021 a0001c0001t0001g0002 a0001c0001t0008g0021	24	HG00140.hp1 HG00735.hp1 HG00738.hp1 others(21): Show HG00140.hp1 HG00735.hp1 HG00738.hp1 HG01175.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01433.hp1 HG01515.hp2 HG01928.hp2 HG01943.hp1 HG01952.hp1 HG01981.hp2 HG02148.hp2 HG03710.hp2 HG03927.hp1 NA18940.hp2 NA18949.hp2 NA18975.hp1 NA18988.hp2 NA18994.hp1 NA19011.hp1 NA19065.hp2 NA19085.hp2	intron_variant	MODIFIER	c.12+555C>T c.12+555C>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068083
chr6:33068100	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+538T>C c.12+538T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068100
chr6:33068192	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+446T>C c.12+446T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068192
chr6:33068400	A A	G G	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+238T>C c.12+238T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068400
chr6:33068433	G G	T T	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+205C>A c.12+205C>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068433
chr6:33068477	C C	T T	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+161G>A c.12+161G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068477
chr6:33068513	G G	A A	1	a0001c0001t0001g0004 a0001c0001t0001g0004	8	HG01071.hp2 HG01081.hp2 HG01167.hp2 others(5): Show HG01071.hp2 HG01081.hp2 HG01167.hp2 HG01433.hp2 HG02735.hp1 HG03491.hp2 HG03942.hp1 NA20805.hp2	intron_variant	MODIFIER	c.12+125C>T c.12+125C>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068513
chr6:33068528	T T	C C	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.12+110A>G c.12+110A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068528
chr6:33068624	C C	T T	1	a0003c0005t0009g0014 a0003c0005t0009g0014	1	HG03491.hp1 HG03491.hp1	intron_variant	MODIFIER	c.12+14G>A c.12+14G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	4/4	chr6	33068624
chr6:33068912	C C	T T	5	a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020	11	HG00642.hp2 HG01081.hp1 HG01243.hp2 others(8): Show HG00642.hp2 HG01081.hp1 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.628+107G>A c.628+107G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	3/4	chr6	33068912
chr6:33069422	G G	C C	12	a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 others(9): Show a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 a0001c0001t0005g0008 a0001c0001t0010g0019 a0001c0004t0002g0017 a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020 a0002c0003t0006g0011	50	HG00639.hp1 HG00642.hp1 HG00642.hp2 others(47): Show HG00639.hp1 HG00642.hp1 HG00642.hp2 HG01081.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01884.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02886.hp1 HG02886.hp2 HG03516.hp1 HG03516.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18949.hp1 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19065.hp1 NA19085.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.347-122C>G c.347-122C>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	2/4	chr6	33069422
chr6:33069898	C C	A A	5	a0002c0002t0003g0006 a0002c0002t0003g0010 a0002c0002t0003g0015 others(2): Show a0002c0002t0003g0006 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020 a0002c0003t0006g0011	11	HG01192.hp2 HG01243.hp2 HG02258.hp1 others(8): Show HG01192.hp2 HG01243.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG02886.hp2 HG03516.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1	intron_variant	MODIFIER	c.101-12G>T c.101-12G>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33069898
chr6:33069934	A A	G G	1	a0001c0001t0002g0018 a0001c0001t0002g0018	1	HG01952.hp2 HG01952.hp2	intron_variant	MODIFIER	c.101-48T>C c.101-48T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33069934
chr6:33070253	C C	G G	14	a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0002g0001 others(11): Show a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 a0001c0001t0005g0008 a0001c0001t0010g0019 a0001c0004t0002g0017 a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020 a0002c0003t0006g0011	53	HG00639.hp1 HG00642.hp1 HG00642.hp2 others(50): Show HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG01081.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01884.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02886.hp1 HG02886.hp2 HG03516.hp1 HG03516.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18949.hp1 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19065.hp1 NA19085.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.101-367G>C c.101-367G>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33070253
chr6:33070969	A A	C C	1	a0001c0004t0002g0017 a0001c0004t0002g0017	1	HG02602.hp1 HG02602.hp1	intron_variant	MODIFIER	c.101-1083T>G c.101-1083T>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33070969
chr6:33071758	A A	T T	8	a0001c0001t0001g0002 a0001c0001t0008g0021 a0002c0002t0003g0006 others(5): Show a0001c0001t0001g0002 a0001c0001t0008g0021 a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0010 a0002c0002t0003g0015 a0002c0002t0003g0020 a0002c0003t0006g0011	37	HG00140.hp1 HG00642.hp2 HG00735.hp1 others(34): Show HG00140.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG01081.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp1 HG01258.hp1 HG01433.hp1 HG01515.hp2 HG01928.hp2 HG01943.hp1 HG01952.hp1 HG01981.hp2 HG02148.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp2 HG02886.hp2 HG03516.hp1 HG03710.hp2 HG03927.hp1 NA18940.hp2 NA18949.hp2 NA18975.hp1 NA18988.hp2 NA18994.hp1 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19065.hp2 NA19085.hp2 NA21309.hp1	intron_variant	MODIFIER	c.100+1713T>A c.100+1713T>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33071758
chr6:33071848	T T	C C	7	a0001c0001t0001g0013 a0001c0001t0002g0001 a0001c0001t0002g0018 others(4): Show a0001c0001t0001g0013 a0001c0001t0002g0001 a0001c0001t0002g0018 a0001c0001t0004g0005 a0001c0001t0005g0008 a0001c0001t0010g0019 a0001c0004t0002g0017	39	HG00639.hp1 HG00642.hp1 HG01192.hp1 others(36): Show HG00639.hp1 HG00642.hp1 HG01192.hp1 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01884.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp2 HG02148.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02602.hp1 HG02602.hp2 HG02886.hp1 HG03516.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp2 NA18940.hp1 NA18949.hp1 NA18963.hp1 NA18963.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA19011.hp2 NA19065.hp1 NA19085.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.100+1623A>G c.100+1623A>G	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33071848
chr6:33071860	A A	G G	1	a0003c0005t0009g0014 a0003c0005t0009g0014	1	HG03491.hp1 HG03491.hp1	intron_variant	MODIFIER	c.100+1611T>C c.100+1611T>C	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33071860
chr6:33072027	C C	T T	1	a0001c0001t0001g0004 a0001c0001t0001g0004	8	HG01071.hp2 HG01081.hp2 HG01167.hp2 others(5): Show HG01071.hp2 HG01081.hp2 HG01167.hp2 HG01433.hp2 HG02735.hp1 HG03491.hp2 HG03942.hp1 NA20805.hp2	intron_variant	MODIFIER	c.100+1444G>A c.100+1444G>A	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33072027
chr6:33072262	C C	A A	1	a0002c0002t0003g0020 a0002c0002t0003g0020	1	HG02258.hp1 HG02258.hp1	intron_variant	MODIFIER	c.100+1209G>T c.100+1209G>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33072262
chr6:33073287	C C	A A	1	a0001c0001t0001g0007 a0001c0001t0001g0007	5	HG00323.hp1 HG01167.hp1 HG01981.hp1 others(2): Show HG00323.hp1 HG01167.hp1 HG01981.hp1 NA18984.hp2 NA20752.hp2	intron_variant	MODIFIER	c.100+184G>T c.100+184G>T	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33073287
chr6:33073411	AATTGATG others(11): Show AATTGATGTGAACCACCCC	A A	2	a0001c0001t0001g0002 a0001c0001t0008g0021 a0001c0001t0001g0002 a0001c0001t0008g0021	24	HG00140.hp1 HG00735.hp1 HG00738.hp1 others(21): Show HG00140.hp1 HG00735.hp1 HG00738.hp1 HG01175.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01433.hp1 HG01515.hp2 HG01928.hp2 HG01943.hp1 HG01952.hp1 HG01981.hp2 HG02148.hp2 HG03710.hp2 HG03927.hp1 NA18940.hp2 NA18949.hp2 NA18975.hp1 NA18988.hp2 NA18994.hp1 NA19011.hp1 NA19065.hp2 NA19085.hp2	intron_variant	MODIFIER	c.100+42_100+59delGG others(16): Show c.100+42_100+59delGGGGTGGTTCACATCAAT	HLA-DPA1	ENSG00000231389.8	transcript	ENST00000692443.1	protein_coding	1/4	chr6	33073411

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JoGo Online Haplotype Explorer HLA-DPA1_chr6_33059569_33078649

JoGo Local Haplotype Explorer (on iGV) HLA-DPA1_chr6_33059569_33078649

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 5)

TTranscript Level Haplotype Info (Total: 10)

GGenebody Level Haplotype Info (Total: 21)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 5)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 11)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 21)

Haplotype Details by Sample (Haploid Level) (Total: 105)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (Exon) (Total: 10)

GGenebody Level Haplotype Variants (Intron) (Total: 49)

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Annotation (Repeats)

Annotation (SNP Array)