Joint Open Genome and Omics Platform (JoGo)

Search by GTEx Variants (in JoGo)

Regionname

Genename

Chr

Tissue

Snpeff annotation impact

Snpeff annotation impact detail

Start

End

Pos

Pval

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view	pos	genename annotation hgvs_c hgvs_p	tissue expression gene -log10(pval) slope Tissue name in GTEx database(the target eQTL tissue name of the GTEx database) The -log10(nominal pvalue) in GTEx database Slope in GTEx database (positive value:alt allele has higher gene expression)	ahapid chapid thapid ghapid ahapid_count chapid_count thapid_count ghapid_count	ahapids ahapids	chapids chapids	thapids thapids	ghapids ghapids	haplotypeids haplotypeids	af allele frequency in GTEx database	ms The number of samples with minor allele in GTEx database	ma The number of minor allele count in GTEx database	ver GTEx version	vid Variant ID in GTEx database	strand strand	impact	chr	ref	alt	external