Summary of Gene Haplotype Catalog by Sample

view srwgs view lrwgs sampleid popname gpopname BOTH SINGLE MULTI NONE BOTH
ratio of gene both haplotypes are cataloged.
 SINGLE
ratio of gene only one haplotype was decided. For chrX and the sample is male then cataloged to JoGo haplotype database. In other case, not cataloged in JoGo database (since incomplete)
 MULTI
ratio of gene more than two haplotypes were estimated. Not cataloged in JoGo database (since complex structure)
 NONE
ratio of gene no haplotype was completed (since complex structure)
srWGS lrWGS HG00099 GBR EUR 14895 3184 76 1084 0.77 0.17 0.00 0.06
srWGS lrWGS HG00140 GBR EUR 14297 3992 61 889 0.74 0.21 0.00 0.05
srWGS lrWGS HG00280 FIN EUR 14171 4031 50 987 0.74 0.21 0.00 0.05
srWGS lrWGS HG00323 FIN EUR 13764 4329 69 1077 0.72 0.23 0.00 0.06
srWGS lrWGS HG00408 CHS EAS 13798 4245 66 1130 0.72 0.22 0.00 0.06
srWGS lrWGS HG00423 CHS EAS 13324 4499 80 1336 0.69 0.23 0.00 0.07
srWGS lrWGS HG00438 CHS EAS 14630 3544 61 1004 0.76 0.18 0.00 0.05
srWGS lrWGS HG00544 CHS EAS 13562 4380 67 1230 0.70 0.23 0.00 0.06
srWGS lrWGS HG00558 CHS EAS 14240 3884 53 1062 0.74 0.20 0.00 0.06
srWGS lrWGS HG00597 CHS EAS 13680 4266 62 1231 0.71 0.22 0.00 0.06
srWGS lrWGS HG00609 CHS EAS 13580 4591 51 1017 0.71 0.24 0.00 0.05
srWGS lrWGS HG00621 CHS EAS 14026 4187 48 978 0.73 0.22 0.00 0.05
srWGS lrWGS HG00639 PUR AMR 15627 2739 50 823 0.81 0.14 0.00 0.04
srWGS lrWGS HG00642 PUR AMR 14731 3561 62 885 0.77 0.19 0.00 0.05
srWGS lrWGS HG00673 CHS EAS 13566 4457 82 1134 0.71 0.23 0.00 0.06
srWGS lrWGS HG00733 PUR AMR 12371 5304 42 1522 0.64 0.28 0.00 0.08
srWGS lrWGS HG00735 PUR AMR 15733 2489 95 922 0.82 0.13 0.00 0.05
srWGS lrWGS HG00738 PUR AMR 14859 3450 70 860 0.77 0.18 0.00 0.04
srWGS lrWGS HG00741 PUR AMR 15858 2427 99 855 0.82 0.13 0.01 0.04
srWGS lrWGS HG01069 PUR AMR 13302 4790 29 1118 0.69 0.25 0.00 0.06
srWGS lrWGS HG01070 PUR AMR 14052 3948 42 1197 0.73 0.21 0.00 0.06
srWGS lrWGS HG01071 PUR AMR 15736 2686 75 742 0.82 0.14 0.00 0.04
srWGS lrWGS HG01074 PUR AMR 14444 3892 45 858 0.75 0.20 0.00 0.04
srWGS lrWGS HG01081 PUR AMR 15457 2838 71 873 0.80 0.15 0.00 0.05
srWGS lrWGS HG01099 PUR AMR 14299 3883 43 1014 0.74 0.20 0.00 0.05
srWGS lrWGS HG01106 PUR AMR 14687 3512 71 969 0.76 0.18 0.00 0.05
srWGS lrWGS HG01109 PUR AMR 16174 2297 52 716 0.84 0.12 0.00 0.04
srWGS lrWGS HG01123 CLM AMR 13909 3888 77 1365 0.72 0.20 0.00 0.07
srWGS lrWGS HG01167 PUR AMR 13927 4193 56 1063 0.72 0.22 0.00 0.06
srWGS lrWGS HG01168 PUR AMR 13485 4486 37 1231 0.70 0.23 0.00 0.06
srWGS lrWGS HG01169 PUR AMR 14224 3888 52 1075 0.74 0.20 0.00 0.06
srWGS lrWGS HG01175 PUR AMR 15466 2749 69 955 0.80 0.14 0.00 0.05
srWGS lrWGS HG01192 PUR AMR 14595 3653 61 930 0.76 0.19 0.00 0.05
srWGS lrWGS HG01243 PUR AMR 16053 2466 72 648 0.83 0.13 0.00 0.03
srWGS lrWGS HG01255 CLM AMR 14573 3745 52 869 0.76 0.19 0.00 0.05
srWGS lrWGS HG01256 CLM AMR 12967 5066 34 1172 0.67 0.26 0.00 0.06
srWGS lrWGS HG01257 CLM AMR 13452 4580 29 1178 0.70 0.24 0.00 0.06
srWGS lrWGS HG01258 CLM AMR 14191 3957 64 1027 0.74 0.21 0.00 0.05
srWGS lrWGS HG01261 CLM AMR 14633 3725 35 846 0.76 0.19 0.00 0.04
srWGS lrWGS HG01346 CLM AMR 14832 3262 84 1061 0.77 0.17 0.00 0.06
srWGS lrWGS HG01358 CLM AMR 13324 4666 56 1193 0.69 0.24 0.00 0.06
srWGS lrWGS HG01361 CLM AMR 14548 3423 116 1152 0.76 0.18 0.01 0.06
srWGS lrWGS HG01433 CLM AMR 14852 3448 54 885 0.77 0.18 0.00 0.05
srWGS lrWGS HG01496 CLM AMR 15459 2893 69 818 0.80 0.15 0.00 0.04
srWGS lrWGS HG01515 IBS EUR 13060 5048 43 1088 0.68 0.26 0.00 0.06
srWGS lrWGS HG01516 IBS EUR 13120 4827 42 1250 0.68 0.25 0.00 0.06
srWGS lrWGS HG01517 IBS EUR 13516 4500 49 1174 0.70 0.23 0.00 0.06
srWGS lrWGS HG01884 ACB AFR 16984 1528 61 666 0.88 0.08 0.00 0.03
srWGS lrWGS HG01891 ACB AFR 16396 1672 93 1078 0.85 0.09 0.00 0.06
srWGS lrWGS HG01928 PEL AMR 12222 5982 47 988 0.64 0.31 0.00 0.05