| view srwgs | view lrwgs | sampleid | popname | gpopname | BOTH | SINGLE | MULTI | NONE | BOTH ratio of gene both haplotypes are cataloged.
|
SINGLE ratio of gene only one haplotype was decided. For
chrX and the sample is male then cataloged to JoGo haplotype database. In other case, not
cataloged in JoGo database (since incomplete)
|
MULTI ratio of gene more than two haplotypes were
estimated. Not cataloged in JoGo database (since complex structure)
|
NONE ratio of gene no haplotype was completed (since
complex structure)
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| srWGS | lrWGS | NA18997 | JPT | EAS | 6490 | 9669 | 15 | 3065 | 0.34 | 0.50 | 0.00 | 0.16 |
| srWGS | lrWGS | NA18998 | JPT | EAS | 12063 | 5762 | 41 | 1373 | 0.63 | 0.30 | 0.00 | 0.07 |
| srWGS | lrWGS | NA18999 | JPT | EAS | 11580 | 6061 | 40 | 1558 | 0.60 | 0.32 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19000 | JPT | EAS | 12526 | 5465 | 47 | 1201 | 0.65 | 0.28 | 0.00 | 0.06 |
| srWGS | lrWGS | NA19001 | JPT | EAS | 7176 | 8957 | 24 | 3082 | 0.37 | 0.47 | 0.00 | 0.16 |
| srWGS | lrWGS | NA19002 | JPT | EAS | 11752 | 5956 | 38 | 1493 | 0.61 | 0.31 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19003 | JPT | EAS | 10322 | 7223 | 32 | 1662 | 0.54 | 0.38 | 0.00 | 0.09 |
| srWGS | lrWGS | NA19004 | JPT | EAS | 10949 | 6765 | 46 | 1479 | 0.57 | 0.35 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19005 | JPT | EAS | 12055 | 5770 | 43 | 1371 | 0.63 | 0.30 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19006 | JPT | EAS | 5333 | 9763 | 16 | 4127 | 0.28 | 0.51 | 0.00 | 0.21 |
| srWGS | lrWGS | NA19007 | JPT | EAS | 12089 | 5771 | 52 | 1327 | 0.63 | 0.30 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19009 | JPT | EAS | 12188 | 5808 | 41 | 1202 | 0.63 | 0.30 | 0.00 | 0.06 |
| srWGS | lrWGS | NA19010 | JPT | EAS | 12682 | 5232 | 45 | 1280 | 0.66 | 0.27 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19011 | JPT | EAS | 13020 | 4927 | 43 | 1249 | 0.68 | 0.26 | 0.00 | 0.06 |
| srWGS | lrWGS | NA19012 | JPT | EAS | 10608 | 7378 | 48 | 1205 | 0.55 | 0.38 | 0.00 | 0.06 |
| srWGS | lrWGS | NA19030 | LWK | AFR | 16803 | 1676 | 87 | 673 | 0.87 | 0.09 | 0.00 | 0.03 |
| srWGS | lrWGS | NA19043 | LWK | AFR | 16677 | 1995 | 127 | 440 | 0.87 | 0.10 | 0.01 | 0.02 |
| srWGS | lrWGS | NA19054 | JPT | EAS | 9081 | 8192 | 21 | 1945 | 0.47 | 0.43 | 0.00 | 0.10 |
| srWGS | lrWGS | NA19055 | JPT | EAS | 7420 | 9496 | 19 | 2304 | 0.39 | 0.49 | 0.00 | 0.12 |
| srWGS | lrWGS | NA19056 | JPT | EAS | 10991 | 6784 | 31 | 1433 | 0.57 | 0.35 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19057 | JPT | EAS | 11438 | 6353 | 36 | 1412 | 0.59 | 0.33 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19058 | JPT | EAS | 9357 | 8051 | 20 | 1811 | 0.49 | 0.42 | 0.00 | 0.09 |
| srWGS | lrWGS | NA19059 | JPT | EAS | 2584 | 10566 | 41 | 6048 | 0.13 | 0.55 | 0.00 | 0.31 |
| srWGS | lrWGS | NA19060 | JPT | EAS | 11730 | 6116 | 37 | 1356 | 0.61 | 0.32 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19062 | JPT | EAS | 9215 | 7955 | 38 | 2031 | 0.48 | 0.41 | 0.00 | 0.11 |
| srWGS | lrWGS | NA19063 | JPT | EAS | 9919 | 7517 | 25 | 1778 | 0.52 | 0.39 | 0.00 | 0.09 |
| srWGS | lrWGS | NA19064 | JPT | EAS | 11462 | 6168 | 38 | 1571 | 0.60 | 0.32 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19065 | JPT | EAS | 11945 | 5809 | 43 | 1442 | 0.62 | 0.30 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19066 | JPT | EAS | 12053 | 5845 | 33 | 1308 | 0.63 | 0.30 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19067 | JPT | EAS | 8223 | 8582 | 10 | 2424 | 0.43 | 0.45 | 0.00 | 0.13 |
| srWGS | lrWGS | NA19068 | JPT | EAS | 11505 | 6307 | 41 | 1386 | 0.60 | 0.33 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19070 | JPT | EAS | 11214 | 6537 | 41 | 1447 | 0.58 | 0.34 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19072 | JPT | EAS | 5365 | 10156 | 11 | 3707 | 0.28 | 0.53 | 0.00 | 0.19 |
| srWGS | lrWGS | NA19074 | JPT | EAS | 12122 | 5701 | 38 | 1378 | 0.63 | 0.30 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19075 | JPT | EAS | 4794 | 10301 | 13 | 4131 | 0.25 | 0.54 | 0.00 | 0.21 |
| srWGS | lrWGS | NA19076 | JPT | EAS | 5461 | 10261 | 10 | 3507 | 0.28 | 0.53 | 0.00 | 0.18 |
| srWGS | lrWGS | NA19077 | JPT | EAS | 10505 | 7137 | 19 | 1578 | 0.55 | 0.37 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19078 | JPT | EAS | 6672 | 9820 | 10 | 2737 | 0.35 | 0.51 | 0.00 | 0.14 |
| srWGS | lrWGS | NA19079 | JPT | EAS | 11506 | 6269 | 36 | 1428 | 0.60 | 0.33 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19080 | JPT | EAS | 9839 | 7608 | 33 | 1759 | 0.51 | 0.40 | 0.00 | 0.09 |
| srWGS | lrWGS | NA19081 | JPT | EAS | 10840 | 6735 | 21 | 1643 | 0.56 | 0.35 | 0.00 | 0.09 |
| srWGS | lrWGS | NA19082 | JPT | EAS | 9133 | 8099 | 10 | 1997 | 0.47 | 0.42 | 0.00 | 0.10 |
| srWGS | lrWGS | NA19083 | JPT | EAS | 8211 | 8668 | 13 | 2347 | 0.43 | 0.45 | 0.00 | 0.12 |
| srWGS | lrWGS | NA19084 | JPT | EAS | 11398 | 6377 | 40 | 1424 | 0.59 | 0.33 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19085 | JPT | EAS | 11625 | 6204 | 36 | 1374 | 0.60 | 0.32 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19086 | JPT | EAS | 8683 | 8456 | 18 | 2082 | 0.45 | 0.44 | 0.00 | 0.11 |
| srWGS | lrWGS | NA19087 | JPT | EAS | 10525 | 6920 | 22 | 1772 | 0.55 | 0.36 | 0.00 | 0.09 |
| srWGS | lrWGS | NA19088 | JPT | EAS | 11929 | 5971 | 60 | 1279 | 0.62 | 0.31 | 0.00 | 0.07 |
| srWGS | lrWGS | NA19089 | JPT | EAS | 6467 | 8270 | 1322 | 3180 | 0.34 | 0.43 | 0.07 | 0.17 |
| srWGS | lrWGS | NA19090 | JPT | EAS | 11423 | 6237 | 35 | 1544 | 0.59 | 0.32 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19091 | JPT | EAS | 11214 | 6533 | 43 | 1449 | 0.58 | 0.34 | 0.00 | 0.08 |
| srWGS | lrWGS | NA19240 | YRI | AFR | 16778 | 1644 | 113 | 704 | 0.87 | 0.09 | 0.01 | 0.04 |
| srWGS | lrWGS | NA20129 | ASW | AFR | 16866 | 1621 | 71 | 681 | 0.88 | 0.08 | 0.00 | 0.04 |
| srWGS | lrWGS | NA20300 | USA | AFR | 16854 | 1541 | 70 | 774 | 0.88 | 0.08 | 0.00 | 0.04 |
| srWGS | lrWGS | NA20752 | TSI | EUR | 14839 | 3421 | 40 | 939 | 0.77 | 0.18 | 0.00 | 0.05 |
| srWGS | lrWGS | NA20805 | TSI | EUR | 13934 | 4016 | 96 | 1193 | 0.72 | 0.21 | 0.00 | 0.06 |
| srWGS | lrWGS | NA20905 | GIH | SAS | 14562 | 3652 | 56 | 969 | 0.76 | 0.19 | 0.00 | 0.05 |
| srWGS | lrWGS | NA21309 | LWK | AFR | 16579 | 1829 | 71 | 760 | 0.86 | 0.10 | 0.00 | 0.04 |