Summary of Gene Haplotype Catalog by Sample

view srwgs view lrwgs sampleid popname gpopname BOTH SINGLE MULTI NONE BOTH
ratio of gene both haplotypes are cataloged.
 SINGLE
ratio of gene only one haplotype was decided. For chrX and the sample is male then cataloged to JoGo haplotype database. In other case, not cataloged in JoGo database (since incomplete)
 MULTI
ratio of gene more than two haplotypes were estimated. Not cataloged in JoGo database (since complex structure)
 NONE
ratio of gene no haplotype was completed (since complex structure)
srWGS lrWGS HG01934 PEL AMR 12945 5164 59 1071 0.67 0.27 0.00 0.06
srWGS lrWGS HG01943 PEL AMR 11828 6066 60 1285 0.61 0.32 0.00 0.07
srWGS lrWGS HG01952 PEL AMR 12843 5374 79 943 0.67 0.28 0.00 0.05
srWGS lrWGS HG01975 PEL AMR 12689 5378 55 1117 0.66 0.28 0.00 0.06
srWGS lrWGS HG01978 PEL AMR 14251 4040 92 856 0.74 0.21 0.00 0.04
srWGS lrWGS HG01981 PEL AMR 13948 4208 44 1039 0.72 0.22 0.00 0.05
srWGS lrWGS HG01993 PEL AMR 12944 5087 73 1135 0.67 0.26 0.00 0.06
srWGS lrWGS HG02004 PEL AMR 12881 5166 57 1135 0.67 0.27 0.00 0.06
srWGS lrWGS HG02015 KHV EAS 12604 5318 41 1276 0.66 0.28 0.00 0.07
srWGS lrWGS HG02027 KHV EAS 13191 4806 58 1184 0.69 0.25 0.00 0.06
srWGS lrWGS HG02040 KHV EAS 14044 4132 47 1016 0.73 0.21 0.00 0.05
srWGS lrWGS HG02055 ACB AFR 16408 2172 87 572 0.85 0.11 0.00 0.03
srWGS lrWGS HG02056 KHV EAS 13441 4654 63 1081 0.70 0.24 0.00 0.06
srWGS lrWGS HG02071 KHV EAS 13158 4834 51 1196 0.68 0.25 0.00 0.06
srWGS lrWGS HG02074 KHV EAS 12962 5050 56 1171 0.67 0.26 0.00 0.06
srWGS lrWGS HG02080 KHV EAS 13836 4114 70 1219 0.72 0.21 0.00 0.06
srWGS lrWGS HG02083 KHV EAS 13596 4481 53 1109 0.71 0.23 0.00 0.06
srWGS lrWGS HG02109 ACB AFR 17122 1430 73 614 0.89 0.07 0.00 0.03
srWGS lrWGS HG02129 KHV EAS 13333 4685 60 1161 0.69 0.24 0.00 0.06
srWGS lrWGS HG02132 KHV EAS 13612 4516 61 1050 0.71 0.23 0.00 0.05
srWGS lrWGS HG02135 KHV EAS 12974 5047 39 1179 0.67 0.26 0.00 0.06
srWGS lrWGS HG02145 ACB AFR 16350 2106 97 686 0.85 0.11 0.01 0.04
srWGS lrWGS HG02148 PEL AMR 11986 6081 55 1117 0.62 0.32 0.00 0.06
srWGS lrWGS HG02155 CDX EAS 13421 4580 59 1179 0.70 0.24 0.00 0.06
srWGS lrWGS HG02165 CDX EAS 14074 3961 78 1126 0.73 0.21 0.00 0.06
srWGS lrWGS HG02257 ACB AFR 16988 1433 66 752 0.88 0.07 0.00 0.04
srWGS lrWGS HG02258 ACB AFR 16553 2046 78 562 0.86 0.11 0.00 0.03
srWGS lrWGS HG02273 PEL AMR 11855 6212 70 1102 0.62 0.32 0.00 0.06
srWGS lrWGS HG02280 ACB AFR 16902 1589 100 648 0.88 0.08 0.01 0.03
srWGS lrWGS HG02293 PEL AMR 12001 6051 34 1153 0.62 0.31 0.00 0.06
srWGS lrWGS HG02300 PEL AMR 13113 4982 46 1098 0.68 0.26 0.00 0.06
srWGS lrWGS HG02451 ACB AFR 16851 1671 76 641 0.88 0.09 0.00 0.03
srWGS lrWGS HG02486 ACB AFR 16255 2191 83 710 0.84 0.11 0.00 0.04
srWGS lrWGS HG02523 KHV EAS 13618 4406 46 1169 0.71 0.23 0.00 0.06
srWGS lrWGS HG02559 ACB AFR 17224 1215 85 715 0.90 0.06 0.00 0.04
srWGS lrWGS HG02572 GWD AFR 16129 2393 93 624 0.84 0.12 0.00 0.03
srWGS lrWGS HG02602 PJL SAS 14272 3964 95 908 0.74 0.21 0.00 0.05
srWGS lrWGS HG02615 GWD AFR 16586 1883 61 709 0.86 0.10 0.00 0.04
srWGS lrWGS HG02622 GWD AFR 17359 1228 148 504 0.90 0.06 0.01 0.03
srWGS lrWGS HG02630 GWD AFR 16957 1485 93 704 0.88 0.08 0.00 0.04
srWGS lrWGS HG02647 GWD AFR 15879 2577 122 661 0.83 0.13 0.01 0.03
srWGS lrWGS HG02683 PJL SAS 13561 4574 71 1033 0.70 0.24 0.00 0.05
srWGS lrWGS HG02698 PJL SAS 14090 4054 77 1018 0.73 0.21 0.00 0.05
srWGS lrWGS HG02717 GWD AFR 16032 2428 77 702 0.83 0.13 0.00 0.04
srWGS lrWGS HG02723 GWD AFR 16502 1838 79 820 0.86 0.10 0.00 0.04
srWGS lrWGS HG02735 PJL SAS 14542 3685 56 956 0.76 0.19 0.00 0.05
srWGS lrWGS HG02738 PJL SAS 13649 4513 49 1028 0.71 0.23 0.00 0.05
srWGS lrWGS HG02809 GWD AFR 16834 1770 81 554 0.87 0.09 0.00 0.03
srWGS lrWGS HG02818 GWD AFR 16199 2010 79 951 0.84 0.10 0.00 0.05
srWGS lrWGS HG02886 GWD AFR 16771 1684 117 667 0.87 0.09 0.01 0.03