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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   SNAI1_chr20_49977980_49993886  SNAI1_chr20_49977980_49993886 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 6615
ensemblid ENSG00000124216.4
hgncid 11128
symbol SNAI1
name snail family transcriptional repressor 1
refseq_nuc NM_005985.4
refseq_prot NP_005976.2
ensembl_nuc ENST00000244050.3
ensembl_prot ENSP00000244050.2
mane_status MANE Select
chr chr20
start 49982980
end 49988886
strand +
ver v1.2
region chr20:49982980-49988886
region5000 chr20:49977980-49993886
regionname0 SNAI1_chr20_49982980_49988886
regionname5000 SNAI1_chr20_49977980_49993886

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/0 264 314 22 51 192 15 33 145 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002 0/1 264 113 58 19 25 1 9 24 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0003 0/0 264 11 9 2 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0004 0/0 264 1 0 0 1 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0005 0/0 264 1 1 0 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/0 795 313 22 51 192 14 33 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
c0002 0/1 795 113 58 19 25 1 9 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
c0003 0/0 795 11 9 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
c0004 0/0 795 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
c0005 0/0 795 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
c0006 0/0 795 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 911 153 7 25 95 3 23 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0002 0/1 911 104 49 19 26 1 8 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0003 1/0 911 55 2 15 23 9 5 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0004 0/0 911 38 0 0 38 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0005 0/0 911 18 4 7 3 2 2 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0006 0/0 911 15 2 2 11 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0007 0/0 911 14 12 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0008 0/0 911 14 1 1 12 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0009 0/0 912 8 0 0 6 0 2 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0010 0/0 911 7 6 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0011 0/0 911 4 4 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0012 0/0 911 2 0 0 2 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0013 0/0 911 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0014 0/0 911 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0015 0/0 911 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0016 0/0 911 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0017 0/0 912 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0018 0/0 911 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0019 0/0 911 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
t0020 0/0 911 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 1/0 210 6 39 123 12 29 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0002 0/0 71 21 16 26 1 7 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0003 0/0 45 1 1 43 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0004 0/0 18 4 7 3 2 2 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0005 0/1 17 14 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0006 0/0 15 13 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0007 0/0 13 2 1 10 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0008 0/0 9 8 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0009 0/0 7 6 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0010 0/0 5 0 0 5 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0011 0/0 4 4 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0012 0/0 2 2 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0013 0/0 2 0 0 2 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0014 0/0 2 0 0 2 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0015 0/0 2 2 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0016 0/0 2 0 0 0 0 2 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0017 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0018 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0019 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0020 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0021 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0022 0/0 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0023 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0024 0/0 1 0 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0025 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0026 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0027 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0028 0/0 1 0 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0029 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0030 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0031 0/0 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
g0032 0/0 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/0 795 313 22 51 192 14 33 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0006 0/0 795 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002 0/1 795 113 58 19 25 1 9 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0003c0003 0/0 795 11 9 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0004c0005 0/0 795 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0005c0004 0/0 795 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 1705 153 7 25 95 3 23 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0003 1/0 1705 54 2 15 23 8 5 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0004 0/0 1705 38 0 0 38 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0005 0/0 1705 18 4 7 3 2 2 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0006 0/0 1705 15 2 2 11 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0008 0/0 1705 14 1 1 12 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0009 0/0 1706 8 0 0 6 0 2 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0010 0/0 1705 7 6 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0012 0/0 1705 2 0 0 2 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0013 0/0 1705 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0017 0/0 1706 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0019 0/0 1705 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0001t0020 0/0 1705 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0001c0006t0003 0/0 1705 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002t0002 0/1 1705 102 48 19 25 1 8 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002t0007 0/0 1705 3 3 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002t0011 0/0 1705 4 4 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002t0014 0/0 1705 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002t0015 0/0 1705 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002t0016 0/0 1705 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0002c0002t0018 0/0 1705 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0003c0003t0007 0/0 1705 11 9 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0004c0005t0002 0/0 1705 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886
a0005c0004t0002 0/0 1705 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 copy fasta chr20 49977980 49993886

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 147 4 24 95 3 21 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0001g0015 0/0 2 2 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0001g0016 0/0 2 0 0 0 0 2 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0001g0028 0/0 1 0 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0001g0030 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0003g0001 1/0 53 2 15 22 8 5 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0003g0029 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0004g0003 0/0 29 0 0 29 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0004g0010 0/0 5 0 0 5 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0004g0014 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0004g0025 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0004g0026 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0004g0027 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0005g0004 0/0 18 4 7 3 2 2 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0006g0007 0/0 13 2 1 10 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0006g0013 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0006g0024 0/0 1 0 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0008g0003 0/0 14 1 1 12 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0009g0001 0/0 8 0 0 6 0 2 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0010g0009 0/0 7 6 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0012g0003 0/0 2 0 0 2 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0013g0014 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0017g0013 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0019g0001 0/0 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0001t0020g0001 0/0 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0001c0006t0003g0031 0/0 1 0 0 0 1 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0002 0/0 66 17 16 25 1 7 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0005 0/1 2 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0006 0/0 15 13 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0008 0/0 9 8 1 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0011 0/0 4 4 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0012 0/0 2 2 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0017 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0021 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0022 0/0 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0002g0023 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0007g0002 0/0 3 3 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0011g0005 0/0 4 4 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0014g0032 0/0 1 0 0 0 0 1 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0015g0018 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0016g0002 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0002c0002t0018g0020 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0003c0003t0007g0005 0/0 11 9 2 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0004c0005t0002g0002 0/0 1 0 0 1 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
a0005c0004t0002g0019 0/0 1 1 0 0 0 0 SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0020 g0001 EUR GBR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00099 hp2 a0001 c0001 t0003 g0001 EUR GBR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00280 hp1 a0001 c0001 t0003 g0001 EUR FIN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00280 hp2 a0001 c0001 t0005 g0004 EUR FIN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00323 hp1 a0002 c0002 t0002 g0002 EUR FIN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00323 hp2 a0001 c0001 t0005 g0004 EUR FIN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00408 hp1 a0001 c0001 t0008 g0003 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00408 hp2 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00423 hp1 a0001 c0001 t0004 g0010 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00423 hp2 a0001 c0001 t0004 g0003 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00544 hp1 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00544 hp2 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00558 hp1 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00558 hp2 a0001 c0001 t0003 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00597 hp1 a0001 c0001 t0009 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00597 hp2 a0001 c0001 t0009 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00609 hp1 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00609 hp2 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00621 hp1 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00621 hp2 a0001 c0001 t0003 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00639 hp1 a0001 c0001 t0005 g0004 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00639 hp2 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00642 hp1 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00642 hp2 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00673 hp1 a0001 c0001 t0001 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00673 hp2 a0001 c0001 t0003 g0001 EAS CHS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00735 hp1 a0001 c0001 t0005 g0004 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00735 hp2 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00738 hp1 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00738 hp2 a0001 c0001 t0008 g0003 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00741 hp1 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG00741 hp2 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01069 hp1 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01069 hp2 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01070 hp1 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01070 hp2 a0001 c0001 t0001 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01071 hp1 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01071 hp2 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01074 hp1 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01074 hp2 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01081 hp1 a0001 c0001 t0001 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01081 hp2 a0001 c0001 t0001 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01099 hp1 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01099 hp2 a0001 c0001 t0005 g0004 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01106 hp1 a0001 c0001 t0001 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01106 hp2 a0003 c0003 t0007 g0005 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01109 hp1 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01109 hp2 a0003 c0003 t0007 g0005 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01167 hp1 a0001 c0001 t0010 g0009 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01167 hp2 a0001 c0001 t0005 g0004 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01168 hp1 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01168 hp2 a0001 c0001 t0001 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01169 hp1 a0001 c0001 t0001 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01169 hp2 a0001 c0001 t0005 g0004 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01175 hp1 a0001 c0001 t0001 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01175 hp2 a0002 c0002 t0002 g0002 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01243 hp1 a0002 c0002 t0002 g0008 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01243 hp2 a0001 c0001 t0003 g0001 AMR PUR SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01255 hp1 a0001 c0001 t0001 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01255 hp2 a0001 c0001 t0005 g0004 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01256 hp1 a0001 c0001 t0003 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01256 hp2 a0001 c0001 t0001 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01258 hp1 a0001 c0001 t0003 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01258 hp2 a0001 c0001 t0001 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01261 hp1 a0001 c0001 t0003 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01261 hp2 a0001 c0001 t0001 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01346 hp1 a0001 c0001 t0001 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01346 hp2 a0001 c0001 t0001 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01358 hp1 a0001 c0001 t0001 g0028 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01358 hp2 a0002 c0002 t0002 g0006 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01361 hp1 a0001 c0001 t0001 g0001 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01361 hp2 a0002 c0002 t0002 g0006 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01515 hp1 a0001 c0001 t0003 g0001 EUR IBS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01515 hp2 a0001 c0006 t0003 g0031 EUR IBS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01516 hp1 a0001 c0001 t0003 g0001 EUR IBS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01516 hp2 a0001 c0001 t0001 g0001 EUR IBS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01517 hp1 a0001 c0001 t0001 g0001 EUR IBS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01517 hp2 a0001 c0001 t0003 g0001 EUR IBS SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01884 hp1 a0002 c0002 t0015 g0018 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01884 hp2 a0002 c0002 t0002 g0006 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01891 hp1 a0001 c0001 t0001 g0001 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01891 hp2 a0002 c0002 t0002 g0006 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01928 hp1 a0002 c0002 t0002 g0002 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01928 hp2 a0001 c0001 t0003 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01934 hp1 a0001 c0001 t0005 g0004 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01934 hp2 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01943 hp1 a0002 c0002 t0002 g0002 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01943 hp2 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01952 hp1 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01952 hp2 a0002 c0002 t0002 g0002 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01975 hp1 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01975 hp2 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01978 hp1 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01978 hp2 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01993 hp1 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01993 hp2 a0001 c0001 t0006 g0024 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02015 hp1 a0001 c0001 t0008 g0003 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02015 hp2 a0001 c0001 t0004 g0026 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02027 hp1 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02027 hp2 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02040 hp1 a0001 c0001 t0003 g0029 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02040 hp2 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02055 hp1 a0002 c0002 t0002 g0002 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02055 hp2 a0002 c0002 t0002 g0006 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02056 hp1 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02056 hp2 a0002 c0002 t0002 g0002 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02071 hp1 a0001 c0001 t0003 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02071 hp2 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02074 hp1 a0001 c0001 t0004 g0010 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02074 hp2 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02080 hp1 a0001 c0001 t0008 g0003 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02080 hp2 a0001 c0001 t0004 g0010 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02083 hp1 a0001 c0001 t0006 g0007 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02083 hp2 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02129 hp1 a0001 c0001 t0006 g0007 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02129 hp2 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02132 hp1 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02132 hp2 a0001 c0001 t0008 g0003 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02135 hp1 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02135 hp2 a0001 c0001 t0004 g0003 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02145 hp1 a0002 c0002 t0002 g0002 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02145 hp2 a0002 c0002 t0002 g0011 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02148 hp1 a0002 c0002 t0002 g0002 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02148 hp2 a0001 c0001 t0006 g0007 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02155 hp1 a0001 c0001 t0001 g0001 EAS CDX SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02155 hp2 a0001 c0001 t0001 g0001 EAS CDX SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02165 hp1 a0001 c0001 t0006 g0007 EAS CDX SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02165 hp2 a0001 c0001 t0001 g0001 EAS CDX SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02257 hp1 a0001 c0001 t0003 g0001 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02257 hp2 a0001 c0001 t0001 g0001 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02258 hp1 a0002 c0002 t0002 g0002 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02258 hp2 a0001 c0001 t0001 g0001 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02273 hp1 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02273 hp2 a0002 c0002 t0002 g0002 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02280 hp1 a0001 c0001 t0003 g0001 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02280 hp2 a0002 c0002 t0002 g0012 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02300 hp1 a0001 c0001 t0001 g0001 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02300 hp2 a0002 c0002 t0002 g0002 AMR PEL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02451 hp1 a0002 c0002 t0002 g0011 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02451 hp2 a0002 c0002 t0002 g0008 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02523 hp1 a0001 c0001 t0001 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02523 hp2 a0001 c0001 t0003 g0001 EAS KHV SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02572 hp1 a0002 c0002 t0002 g0006 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02572 hp2 a0002 c0002 t0007 g0002 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02602 hp1 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02602 hp2 a0002 c0002 t0002 g0002 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02615 hp1 a0002 c0002 t0002 g0017 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02615 hp2 a0002 c0002 t0002 g0006 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02622 hp1 a0003 c0003 t0007 g0005 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02622 hp2 a0002 c0002 t0002 g0002 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02630 hp1 a0002 c0002 t0002 g0008 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02630 hp2 a0001 c0001 t0006 g0007 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02647 hp1 a0001 c0001 t0001 g0015 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02647 hp2 a0002 c0002 t0002 g0002 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02683 hp1 a0001 c0001 t0003 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02683 hp2 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02698 hp1 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02698 hp2 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02717 hp1 a0002 c0002 t0002 g0006 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02717 hp2 a0001 c0001 t0001 g0015 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02723 hp1 a0002 c0002 t0002 g0002 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02723 hp2 a0002 c0002 t0002 g0023 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02735 hp1 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02735 hp2 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02738 hp1 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02738 hp2 a0001 c0001 t0005 g0004 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02809 hp1 a0001 c0001 t0010 g0009 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02809 hp2 a0002 c0002 t0002 g0006 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02886 hp1 a0001 c0001 t0010 g0009 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02886 hp2 a0003 c0003 t0007 g0005 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02895 hp1 a0001 c0001 t0010 g0009 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02895 hp2 a0002 c0002 t0002 g0008 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02896 hp1 a0003 c0003 t0007 g0005 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02896 hp2 a0002 c0002 t0002 g0008 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02897 hp1 a0001 c0001 t0010 g0009 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02897 hp2 a0003 c0003 t0007 g0005 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02922 hp1 a0002 c0002 t0002 g0002 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02922 hp2 a0001 c0001 t0010 g0009 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02965 hp1 a0002 c0002 t0002 g0012 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02965 hp2 a0002 c0002 t0002 g0002 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02970 hp1 a0002 c0002 t0011 g0005 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02970 hp2 a0001 c0001 t0010 g0009 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02976 hp1 a0002 c0002 t0002 g0006 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02976 hp2 a0001 c0001 t0005 g0004 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03017 hp1 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03017 hp2 a0002 c0002 t0002 g0002 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03139 hp1 a0002 c0002 t0002 g0008 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03139 hp2 a0002 c0002 t0002 g0008 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03195 hp1 a0001 c0001 t0005 g0004 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03195 hp2 a0002 c0002 t0002 g0002 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03209 hp1 a0002 c0002 t0002 g0002 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03209 hp2 a0002 c0002 t0016 g0002 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03225 hp1 a0002 c0002 t0002 g0011 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03225 hp2 a0001 c0001 t0005 g0004 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03239 hp1 a0001 c0001 t0019 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03239 hp2 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03453 hp1 a0002 c0002 t0002 g0002 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03453 hp2 a0001 c0001 t0006 g0007 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03486 hp1 a0003 c0003 t0007 g0005 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03486 hp2 a0002 c0002 t0002 g0006 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03490 hp1 a0002 c0002 t0002 g0002 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03490 hp2 a0001 c0001 t0003 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03492 hp1 a0001 c0001 t0003 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03492 hp2 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03516 hp1 a0002 c0002 t0002 g0002 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03516 hp2 a0002 c0002 t0002 g0006 AFR ESN SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03540 hp1 a0002 c0002 t0002 g0002 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03540 hp2 a0002 c0002 t0002 g0008 AFR GWD SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03579 hp1 a0005 c0004 t0002 g0019 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03579 hp2 a0003 c0003 t0007 g0005 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03654 hp1 a0002 c0002 t0002 g0002 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03654 hp2 a0001 c0001 t0009 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03704 hp1 a0002 c0002 t0002 g0002 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03704 hp2 a0001 c0001 t0001 g0001 SAS PJL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03831 hp1 a0001 c0001 t0001 g0001 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03831 hp2 a0002 c0002 t0002 g0002 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03834 hp1 a0001 c0001 t0001 g0001 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03834 hp2 a0001 c0001 t0001 g0001 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03927 hp1 a0001 c0001 t0009 g0001 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03927 hp2 a0001 c0001 t0005 g0004 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03942 hp1 a0002 c0002 t0014 g0032 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03942 hp2 a0001 c0001 t0001 g0001 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04115 hp1 a0002 c0002 t0002 g0022 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04115 hp2 a0001 c0001 t0003 g0001 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04184 hp1 a0001 c0001 t0001 g0001 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04184 hp2 a0001 c0001 t0001 g0001 SAS BEB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04199 hp1 a0001 c0001 t0001 g0001 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04199 hp2 a0002 c0002 t0002 g0002 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04204 hp1 a0001 c0001 t0001 g0016 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04204 hp2 a0001 c0001 t0001 g0001 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04228 hp1 a0001 c0001 t0001 g0001 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG04228 hp2 a0001 c0001 t0003 g0001 SAS STU SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18522 hp1 a0002 c0002 t0002 g0011 AFR YRI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18522 hp2 a0003 c0003 t0007 g0005 AFR YRI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18612 hp1 a0001 c0001 t0001 g0001 EAS CHB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18612 hp2 a0001 c0001 t0001 g0001 EAS CHB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18747 hp1 a0001 c0001 t0006 g0007 EAS CHB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18747 hp2 a0001 c0001 t0001 g0001 EAS CHB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18939 hp1 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18939 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18940 hp1 a0001 c0001 t0009 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18940 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18941 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18941 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18942 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18942 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18943 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18943 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18944 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18944 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18945 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18945 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18946 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18946 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18947 hp1 a0001 c0001 t0005 g0004 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18947 hp2 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18948 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18948 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18949 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18949 hp2 a0001 c0001 t0009 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18950 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18950 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18951 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18951 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18952 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18952 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18953 hp1 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18953 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18954 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18954 hp2 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18956 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18956 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18957 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18957 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18959 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18959 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18960 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18960 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18961 hp1 a0001 c0001 t0006 g0007 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18961 hp2 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18962 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18962 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18963 hp1 a0001 c0001 t0006 g0007 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18963 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18964 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18964 hp2 a0001 c0001 t0009 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18966 hp1 a0001 c0001 t0012 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18966 hp2 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18968 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18968 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18969 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18969 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18970 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18970 hp2 a0001 c0001 t0012 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18971 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18971 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18973 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18973 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18974 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18974 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18975 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18975 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18977 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18977 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18978 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18978 hp2 a0001 c0001 t0004 g0027 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18979 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18979 hp2 a0001 c0001 t0006 g0007 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18980 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18980 hp2 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18981 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18981 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18982 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18982 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18983 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18983 hp2 a0001 c0001 t0006 g0007 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18984 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18984 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18986 hp1 a0001 c0001 t0005 g0004 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18986 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18988 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18988 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18989 hp1 a0001 c0001 t0006 g0007 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18989 hp2 a0001 c0001 t0009 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18990 hp1 a0001 c0001 t0004 g0010 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18990 hp2 a0001 c0001 t0004 g0025 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18992 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18992 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18993 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18993 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18994 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18994 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18995 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18995 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18997 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18997 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18998 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18998 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18999 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18999 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19000 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19000 hp2 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19003 hp1 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19003 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19004 hp1 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19004 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19005 hp1 a0001 c0001 t0006 g0013 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19005 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19006 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19006 hp2 a0001 c0001 t0017 g0013 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19007 hp1 a0001 c0001 t0005 g0004 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19007 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19009 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19009 hp2 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19010 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19010 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19011 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19011 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19012 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19012 hp2 a0001 c0001 t0006 g0007 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19030 hp1 a0002 c0002 t0002 g0006 AFR LWK SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19030 hp2 a0002 c0002 t0002 g0021 AFR LWK SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19043 hp1 a0003 c0003 t0007 g0005 AFR LWK SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19043 hp2 a0002 c0002 t0011 g0005 AFR LWK SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19054 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19054 hp2 a0001 c0001 t0004 g0014 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19057 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19057 hp2 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19059 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19059 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19060 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19060 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19062 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19062 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19063 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19063 hp2 a0001 c0001 t0004 g0010 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19064 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19064 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19065 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19065 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19067 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19067 hp2 a0001 c0001 t0008 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19068 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19068 hp2 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19070 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19070 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19074 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19074 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19079 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19079 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19080 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19080 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19081 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19081 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19082 hp1 a0001 c0001 t0013 g0014 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19082 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19084 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19084 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19085 hp1 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19085 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19086 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19086 hp2 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19088 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19088 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19089 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19089 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19090 hp1 a0001 c0001 t0004 g0003 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19090 hp2 a0002 c0002 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19091 hp1 a0001 c0001 t0003 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19091 hp2 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19240 hp1 a0002 c0002 t0002 g0008 AFR YRI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA19240 hp2 a0002 c0002 t0011 g0005 AFR YRI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20129 hp1 a0001 c0001 t0001 g0001 AFR ASW SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20129 hp2 a0002 c0002 t0007 g0002 AFR ASW SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20752 hp1 a0001 c0001 t0003 g0001 EUR TSI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20752 hp2 a0001 c0001 t0001 g0001 EUR TSI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20805 hp1 a0001 c0001 t0003 g0001 EUR TSI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20805 hp2 a0001 c0001 t0003 g0001 EUR TSI SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20905 hp1 a0001 c0001 t0001 g0001 SAS GIH SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20905 hp2 a0001 c0001 t0001 g0016 SAS GIH SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01123 hp1 a0002 c0002 t0002 g0002 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG01123 hp2 a0002 c0002 t0002 g0002 AMR CLM SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02109 hp1 a0001 c0001 t0001 g0030 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02109 hp2 a0002 c0002 t0002 g0002 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02486 hp1 a0002 c0002 t0018 g0020 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02486 hp2 a0002 c0002 t0002 g0002 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02559 hp1 a0002 c0002 t0002 g0006 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG02559 hp2 a0002 c0002 t0011 g0005 AFR ACB SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03471 hp1 a0002 c0002 t0002 g0006 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG03471 hp2 a0002 c0002 t0002 g0002 AFR MSL SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG06807 hp1 a0002 c0002 t0002 g0005 AFR USA SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
HG06807 hp2 a0003 c0003 t0007 g0005 AFR USA SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18955 hp1 a0001 c0001 t0001 g0001 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA18955 hp2 a0004 c0005 t0002 g0002 EAS JPT SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20300 hp1 a0001 c0001 t0008 g0003 AFR USA SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA20300 hp2 a0002 c0002 t0002 g0002 AFR USA SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA21309 hp1 a0001 c0001 t0005 g0004 AFR LWK SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
NA21309 hp2 a0002 c0002 t0007 g0002 AFR LWK SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
homoSapiens_chm13v2 hp1 a0002 c0002 t0002 g0005 REF REF SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886
homoSapiens_grch38 hp1 a0001 c0001 t0003 g0001 REF REF SNAI1_chr20_49977980_49993886 SNAI1 chr20 49977980 49993886

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr20:49983938 C
C
 T
T
 1 a0003
a0003
 11 HG01106.hp2
HG01109.hp2
HG02622.hp1
others(8): Show 
HG01106.hp2
HG01109.hp2
HG02622.hp1
HG02886.hp2
HG02896.hp1
HG02897.hp2
HG03486.hp1
HG03579.hp2
HG06807.hp2
NA18522.hp2
NA19043.hp1
 missense_variant MODERATE c.197C>T
c.197C>T
 p.Ala66Val
p.Ala66Val
 SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/3 277/1705 197/795 66/264 chr20 49983938
chr20:49984094 T
T
 C
C
 4 a0002
a0003
a0004
others(1): Show 
a0002
a0003
a0004
a0005
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 missense_variant MODERATE c.353T>C
c.353T>C
 p.Val118Ala
p.Val118Ala
 SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/3 433/1705 353/795 118/264 chr20 49984094
chr20:49984118 A
A
 G
G
 1 a0004
a0004
 1 NA18955.hp2
NA18955.hp2
 missense_variant MODERATE c.377A>G
c.377A>G
 p.Tyr126Cys
p.Tyr126Cys
 SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/3 457/1705 377/795 126/264 chr20 49984118
chr20:49988033 G
G
 A
A
 1 a0005
a0005
 1 HG03579.hp1
HG03579.hp1
 missense_variant MODERATE c.772G>A
c.772G>A
 p.Gly258Ser
p.Gly258Ser
 SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 852/1705 772/795 258/264 chr20 49988033

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr20:49984020 T
T
 C
C
 4 a0002c0002
a0003c0003
a0004c0005
others(1): Show 
a0002c0002
a0003c0003
a0004c0005
a0005c0004
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 synonymous_variant LOW c.279T>C
c.279T>C
 p.Asp93Asp
p.Asp93Asp
 SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/3 359/1705 279/795 93/264 chr20 49984020
chr20:49984137 G
G
 A
A
 1 a0001c0006
a0001c0006
 1 HG01515.hp2
HG01515.hp2
 synonymous_variant LOW c.396G>A
c.396G>A
 p.Leu132Leu
p.Leu132Leu
 SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/3 476/1705 396/795 132/264 chr20 49984137
chr20:49984272 G
G
 A
A
 4 a0002c0002
a0003c0003
a0004c0005
others(1): Show 
a0002c0002
a0003c0003
a0004c0005
a0005c0004
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 synonymous_variant LOW c.531G>A
c.531G>A
 p.Thr177Thr
p.Thr177Thr
 SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/3 611/1705 531/795 177/264 chr20 49984272

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr20:49983012 T
T
 C
C
 17 a0001c0001t0004
a0001c0001t0005
a0001c0001t0006
others(14): Show 
a0001c0001t0004
a0001c0001t0005
a0001c0001t0006
a0001c0001t0008
a0001c0001t0012
a0001c0001t0013
a0001c0001t0017
a0002c0002t0002
a0002c0002t0007
a0002c0002t0011
a0002c0002t0014
a0002c0002t0015
a0002c0002t0016
a0002c0002t0018
a0003c0003t0007
a0004c0005t0002
a0005c0004t0002
 215 HG00280.hp2
HG00323.hp1
HG00323.hp2
others(212): Show 
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00423.hp1
HG00423.hp2
HG00639.hp1
HG00642.hp2
HG00735.hp1
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01169.hp2
HG01175.hp2
HG01243.hp1
HG01255.hp2
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp2
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02165.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18747.hp1
NA18939.hp1
NA18940.hp2
NA18941.hp1
NA18942.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18947.hp1
NA18948.hp2
NA18949.hp1
NA18953.hp1
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18959.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp2
NA18963.hp1
NA18963.hp2
NA18964.hp1
NA18966.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp2
NA18973.hp1
NA18973.hp2
NA18974.hp1
NA18975.hp1
NA18978.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18989.hp1
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18993.hp1
NA18994.hp2
NA18997.hp2
NA18999.hp2
NA19000.hp1
NA19003.hp1
NA19003.hp2
NA19004.hp1
NA19005.hp1
NA19006.hp2
NA19007.hp1
NA19007.hp2
NA19009.hp2
NA19011.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp2
NA19057.hp2
NA19059.hp1
NA19060.hp2
NA19062.hp2
NA19063.hp2
NA19064.hp1
NA19064.hp2
NA19065.hp1
NA19067.hp2
NA19068.hp1
NA19070.hp1
NA19070.hp2
NA19074.hp2
NA19079.hp2
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19085.hp1
NA19086.hp1
NA19086.hp2
NA19089.hp1
NA19090.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20300.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 5_prime_UTR_variant MODIFIER c.-48T>C
c.-48T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/3 48 chr20 49983012
chr20:49983019 C
C
 G
G
 1 a0002c0002t0018
a0002c0002t0018
 1 HG02486.hp1
HG02486.hp1
 5_prime_UTR_variant MODIFIER c.-41C>G
c.-41C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/3 41 chr20 49983019
chr20:49983023 T
T
 C
C
 1 a0001c0001t0013
a0001c0001t0013
 1 NA19082.hp1
NA19082.hp1
 5_prime_UTR_variant MODIFIER c.-37T>C
c.-37T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/3 37 chr20 49983023
chr20:49983024 G
G
 C
C
 10 a0002c0002t0002
a0002c0002t0007
a0002c0002t0011
others(7): Show 
a0002c0002t0002
a0002c0002t0007
a0002c0002t0011
a0002c0002t0014
a0002c0002t0015
a0002c0002t0016
a0002c0002t0018
a0003c0003t0007
a0004c0005t0002
a0005c0004t0002
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 5_prime_UTR_variant MODIFIER c.-36G>C
c.-36G>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/3 36 chr20 49983024
chr20:49988058 C
C
 G
G
 1 a0002c0002t0018
a0002c0002t0018
 1 HG02486.hp1
HG02486.hp1
 3_prime_UTR_variant MODIFIER c.*2C>G
c.*2C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 2 chr20 49988058
chr20:49988111 A
A
 C
C
 1 a0002c0002t0016
a0002c0002t0016
 1 HG03209.hp2
HG03209.hp2
 3_prime_UTR_variant MODIFIER c.*55A>C
c.*55A>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 55 chr20 49988111
chr20:49988215 T
T
 C
C
 1 a0002c0002t0014
a0002c0002t0014
 1 HG03942.hp1
HG03942.hp1
 3_prime_UTR_variant MODIFIER c.*159T>C
c.*159T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 159 chr20 49988215
chr20:49988240 G
G
 A
A
 1 a0001c0001t0019
a0001c0001t0019
 1 HG03239.hp1
HG03239.hp1
 3_prime_UTR_variant MODIFIER c.*184G>A
c.*184G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 184 chr20 49988240
chr20:49988262 A
A
 G
G
 15 a0001c0001t0001
a0001c0001t0005
a0001c0001t0006
others(12): Show 
a0001c0001t0001
a0001c0001t0005
a0001c0001t0006
a0001c0001t0009
a0001c0001t0017
a0001c0001t0019
a0002c0002t0002
a0002c0002t0007
a0002c0002t0011
a0002c0002t0014
a0002c0002t0016
a0002c0002t0018
a0003c0003t0007
a0004c0005t0002
a0005c0004t0002
 321 HG00280.hp2
HG00323.hp1
HG00323.hp2
others(318): Show 
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp2
HG00544.hp1
HG00544.hp2
HG00558.hp1
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00639.hp1
HG00642.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01070.hp2
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01255.hp1
HG01255.hp2
HG01256.hp2
HG01258.hp2
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01361.hp1
HG01361.hp2
HG01516.hp2
HG01517.hp1
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01934.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01993.hp1
HG01993.hp2
HG02027.hp1
HG02027.hp2
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp1
HG02056.hp2
HG02071.hp2
HG02074.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02129.hp2
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02273.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02523.hp1
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp1
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03654.hp2
HG03704.hp1
HG03704.hp2
HG03831.hp1
HG03831.hp2
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18939.hp2
NA18940.hp1
NA18940.hp2
NA18941.hp2
NA18942.hp1
NA18943.hp1
NA18943.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp2
NA18947.hp1
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18949.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18953.hp2
NA18955.hp1
NA18955.hp2
NA18956.hp1
NA18956.hp2
NA18959.hp1
NA18960.hp1
NA18960.hp2
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18964.hp1
NA18964.hp2
NA18968.hp1
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18971.hp2
NA18973.hp1
NA18974.hp2
NA18975.hp2
NA18977.hp1
NA18977.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18981.hp1
NA18981.hp2
NA18982.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp2
NA18986.hp1
NA18986.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18992.hp2
NA18993.hp2
NA18994.hp2
NA18995.hp2
NA18997.hp1
NA18997.hp2
NA18998.hp2
NA18999.hp1
NA19003.hp2
NA19004.hp2
NA19005.hp1
NA19005.hp2
NA19006.hp1
NA19006.hp2
NA19007.hp1
NA19007.hp2
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19011.hp1
NA19011.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp1
NA19059.hp2
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp2
NA19065.hp1
NA19065.hp2
NA19068.hp1
NA19070.hp2
NA19074.hp1
NA19079.hp1
NA19080.hp1
NA19080.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19084.hp2
NA19085.hp1
NA19085.hp2
NA19088.hp1
NA19088.hp2
NA19089.hp2
NA19090.hp2
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp1
NA20129.hp2
NA20300.hp2
NA20752.hp2
NA20905.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*206A>G
c.*206A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 206 chr20 49988262
chr20:49988446 A
A
 AC
AC
 2 a0001c0001t0009
a0001c0001t0017
a0001c0001t0009
a0001c0001t0017
 9 HG00597.hp1
HG00597.hp2
HG03654.hp2
others(6): Show 
HG00597.hp1
HG00597.hp2
HG03654.hp2
HG03927.hp1
NA18940.hp1
NA18949.hp2
NA18964.hp2
NA18989.hp2
NA19006.hp2
 3_prime_UTR_variant MODIFIER c.*391dupC
c.*391dupC
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 392 INFO_REALIGN_3_PRIME chr20 49988446
chr20:49988448 A
A
 C
C
 6 a0001c0001t0001
a0001c0001t0006
a0001c0001t0009
others(3): Show 
a0001c0001t0001
a0001c0001t0006
a0001c0001t0009
a0001c0001t0017
a0001c0001t0019
a0002c0002t0018
 179 HG00408.hp2
HG00544.hp1
HG00544.hp2
others(176): Show 
HG00408.hp2
HG00544.hp1
HG00544.hp2
HG00558.hp1
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00673.hp1
HG01070.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01168.hp2
HG01169.hp1
HG01175.hp1
HG01255.hp1
HG01256.hp2
HG01258.hp2
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01517.hp1
HG01891.hp1
HG01934.hp2
HG01943.hp2
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01993.hp1
HG01993.hp2
HG02027.hp1
HG02027.hp2
HG02040.hp2
HG02056.hp1
HG02071.hp2
HG02074.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02129.hp1
HG02129.hp2
HG02132.hp1
HG02135.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02257.hp2
HG02258.hp2
HG02273.hp1
HG02300.hp1
HG02486.hp1
HG02523.hp1
HG02602.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG03017.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp2
HG03492.hp2
HG03654.hp2
HG03704.hp2
HG03831.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03942.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04204.hp2
HG04228.hp1
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18939.hp2
NA18940.hp1
NA18941.hp2
NA18942.hp1
NA18943.hp2
NA18944.hp2
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18949.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18953.hp2
NA18955.hp1
NA18956.hp1
NA18956.hp2
NA18959.hp1
NA18960.hp1
NA18960.hp2
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18964.hp2
NA18968.hp1
NA18970.hp1
NA18971.hp1
NA18971.hp2
NA18974.hp2
NA18975.hp2
NA18977.hp1
NA18977.hp2
NA18979.hp1
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18982.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18993.hp2
NA18995.hp2
NA18997.hp1
NA18998.hp2
NA18999.hp1
NA19004.hp2
NA19005.hp1
NA19005.hp2
NA19006.hp1
NA19006.hp2
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19011.hp2
NA19012.hp1
NA19012.hp2
NA19054.hp1
NA19057.hp1
NA19059.hp2
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19065.hp2
NA19074.hp1
NA19079.hp1
NA19080.hp1
NA19080.hp2
NA19081.hp1
NA19081.hp2
NA19082.hp2
NA19085.hp2
NA19088.hp1
NA19088.hp2
NA19089.hp2
NA19091.hp2
NA20129.hp1
NA20752.hp2
NA20905.hp1
NA20905.hp2
 3_prime_UTR_variant MODIFIER c.*392A>C
c.*392A>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 392 chr20 49988448
chr20:49988450 C
C
 A
A
 1 a0001c0001t0020
a0001c0001t0020
 1 HG00099.hp1
HG00099.hp1
 3_prime_UTR_variant MODIFIER c.*394C>A
c.*394C>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 394 chr20 49988450
chr20:49988536 C
C
 G
G
 1 a0001c0001t0012
a0001c0001t0012
 2 NA18966.hp1
NA18970.hp2
NA18966.hp1
NA18970.hp2
 3_prime_UTR_variant MODIFIER c.*480C>G
c.*480C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 480 chr20 49988536
chr20:49988543 G
G
 A
A
 2 a0001c0001t0010
a0002c0002t0015
a0001c0001t0010
a0002c0002t0015
 8 HG01167.hp1
HG01884.hp1
HG02809.hp1
others(5): Show 
HG01167.hp1
HG01884.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02897.hp1
HG02922.hp2
HG02970.hp2
 3_prime_UTR_variant MODIFIER c.*487G>A
c.*487G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 487 chr20 49988543
chr20:49988570 C
C
 T
T
 3 a0001c0001t0005
a0002c0002t0007
a0003c0003t0007
a0001c0001t0005
a0002c0002t0007
a0003c0003t0007
 32 HG00280.hp2
HG00323.hp2
HG00639.hp1
others(29): Show 
HG00280.hp2
HG00323.hp2
HG00639.hp1
HG00735.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01167.hp2
HG01169.hp2
HG01255.hp2
HG01934.hp1
HG02572.hp2
HG02622.hp1
HG02738.hp2
HG02886.hp2
HG02896.hp1
HG02897.hp2
HG02976.hp2
HG03195.hp1
HG03225.hp2
HG03486.hp1
HG03579.hp2
HG03927.hp2
HG06807.hp2
NA18522.hp2
NA18947.hp1
NA18986.hp1
NA19007.hp1
NA19043.hp1
NA20129.hp2
NA21309.hp1
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*514C>T
c.*514C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 514 chr20 49988570
chr20:49988578 G
G
 C
C
 1 a0002c0002t0018
a0002c0002t0018
 1 HG02486.hp1
HG02486.hp1
 3_prime_UTR_variant MODIFIER c.*522G>C
c.*522G>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 522 chr20 49988578
chr20:49988718 C
C
 G
G
 1 a0002c0002t0011
a0002c0002t0011
 4 HG02559.hp2
HG02970.hp1
NA19043.hp2
others(1): Show 
HG02559.hp2
HG02970.hp1
NA19043.hp2
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*662C>G
c.*662C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 662 chr20 49988718
chr20:49988810 T
T
 C
C
 1 a0001c0001t0008
a0001c0001t0008
 14 HG00408.hp1
HG00738.hp2
HG02015.hp1
others(11): Show 
HG00408.hp1
HG00738.hp2
HG02015.hp1
HG02080.hp1
HG02132.hp2
NA18939.hp1
NA18953.hp1
NA18961.hp2
NA19003.hp1
NA19004.hp1
NA19009.hp2
NA19057.hp2
NA19067.hp2
NA20300.hp1
 3_prime_UTR_variant MODIFIER c.*754T>C
c.*754T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 3/3 754 chr20 49988810

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr20:49983345 G
G
 T
T
 1 a0002c0002t0014g0032
a0002c0002t0014g0032
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.82+204G>T
c.82+204G>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/2 chr20 49983345
chr20:49983405 AG
AG
 A
A
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.82+268delG
c.82+268delG
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/2 INFO_REALIGN_3_PRIME chr20 49983405
chr20:49983423 C
C
 T
T
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.82+282C>T
c.82+282C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/2 chr20 49983423
chr20:49983731 C
C
 T
T
 1 a0001c0001t0005g0004
a0001c0001t0005g0004
 18 HG00280.hp2
HG00323.hp2
HG00639.hp1
others(15): Show 
HG00280.hp2
HG00323.hp2
HG00639.hp1
HG00735.hp1
HG01099.hp2
HG01167.hp2
HG01169.hp2
HG01255.hp2
HG01934.hp1
HG02738.hp2
HG02976.hp2
HG03195.hp1
HG03225.hp2
HG03927.hp2
NA18947.hp1
NA18986.hp1
NA19007.hp1
NA21309.hp1
 intron_variant MODIFIER c.83-93C>T
c.83-93C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/2 chr20 49983731
chr20:49983798 G
G
 A
A
 4 a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
others(1): Show 
a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
a0001c0001t0017g0013
 16 HG01993.hp2
HG02083.hp1
HG02129.hp1
others(13): Show 
HG01993.hp2
HG02083.hp1
HG02129.hp1
HG02148.hp2
HG02165.hp1
HG02630.hp2
HG03453.hp2
NA18747.hp1
NA18961.hp1
NA18963.hp1
NA18979.hp2
NA18983.hp2
NA18989.hp1
NA19005.hp1
NA19006.hp2
NA19012.hp2
 intron_variant MODIFIER c.83-26G>A
c.83-26G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 1/2 chr20 49983798
chr20:49984387 C
C
 T
T
 7 a0002c0002t0002g0002
a0002c0002t0002g0011
a0002c0002t0002g0022
others(4): Show 
a0002c0002t0002g0002
a0002c0002t0002g0011
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0016g0002
a0004c0005t0002g0002
 77 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(74): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02300.hp2
HG02451.hp1
HG02486.hp2
HG02572.hp2
HG02602.hp2
HG02622.hp2
HG02647.hp2
HG02723.hp1
HG02723.hp2
HG02922.hp1
HG02965.hp2
HG03017.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp2
HG03490.hp1
HG03516.hp1
HG03540.hp1
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG04115.hp1
HG04199.hp2
NA18522.hp1
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.610+36C>T
c.610+36C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984387
chr20:49984405 A
A
 G
G
 1 a0001c0001t0010g0009
a0001c0001t0010g0009
 7 HG01167.hp1
HG02809.hp1
HG02886.hp1
others(4): Show 
HG01167.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02897.hp1
HG02922.hp2
HG02970.hp2
 intron_variant MODIFIER c.610+54A>G
c.610+54A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984405
chr20:49984452 C
C
 T
T
 1 a0002c0002t0002g0021
a0002c0002t0002g0021
 1 NA19030.hp2
NA19030.hp2
 intron_variant MODIFIER c.610+101C>T
c.610+101C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984452
chr20:49984548 A
A
 G
G
 1 a0002c0002t0002g0023
a0002c0002t0002g0023
 1 HG02723.hp2
HG02723.hp2
 intron_variant MODIFIER c.610+197A>G
c.610+197A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984548
chr20:49984555 C
C
 T
T
 1 a0002c0002t0002g0012
a0002c0002t0002g0012
 2 HG02280.hp2
HG02965.hp1
HG02280.hp2
HG02965.hp1
 intron_variant MODIFIER c.610+204C>T
c.610+204C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984555
chr20:49984592 C
C
 G
G
 1 a0001c0006t0003g0031
a0001c0006t0003g0031
 1 HG01515.hp2
HG01515.hp2
 intron_variant MODIFIER c.610+241C>G
c.610+241C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984592
chr20:49984863 A
A
 G
G
 1 a0001c0001t0005g0004
a0001c0001t0005g0004
 18 HG00280.hp2
HG00323.hp2
HG00639.hp1
others(15): Show 
HG00280.hp2
HG00323.hp2
HG00639.hp1
HG00735.hp1
HG01099.hp2
HG01167.hp2
HG01169.hp2
HG01255.hp2
HG01934.hp1
HG02738.hp2
HG02976.hp2
HG03195.hp1
HG03225.hp2
HG03927.hp2
NA18947.hp1
NA18986.hp1
NA19007.hp1
NA21309.hp1
 intron_variant MODIFIER c.610+512A>G
c.610+512A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984863
chr20:49984982 T
T
 C
C
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+631T>C
c.610+631T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49984982
chr20:49985010 TAG
TAG
 T
T
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+664_610+665del
others(2): Show 
c.610+664_610+665delAG
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 INFO_REALIGN_3_PRIME chr20 49985010
chr20:49985043 A
A
 G
G
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+692A>G
c.610+692A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985043
chr20:49985096 G
G
 C
C
 33 a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
others(30): Show 
a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
a0001c0001t0004g0025
a0001c0001t0004g0026
a0001c0001t0004g0027
a0001c0001t0005g0004
a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
a0001c0001t0008g0003
a0001c0001t0012g0003
a0001c0001t0013g0014
a0001c0001t0017g0013
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 215 HG00280.hp2
HG00323.hp1
HG00323.hp2
others(212): Show 
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00423.hp1
HG00423.hp2
HG00639.hp1
HG00642.hp2
HG00735.hp1
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01169.hp2
HG01175.hp2
HG01243.hp1
HG01255.hp2
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp2
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02165.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18747.hp1
NA18939.hp1
NA18940.hp2
NA18941.hp1
NA18942.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18947.hp1
NA18948.hp2
NA18949.hp1
NA18953.hp1
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18959.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp2
NA18963.hp1
NA18963.hp2
NA18964.hp1
NA18966.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp2
NA18973.hp1
NA18973.hp2
NA18974.hp1
NA18975.hp1
NA18978.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18989.hp1
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18993.hp1
NA18994.hp2
NA18997.hp2
NA18999.hp2
NA19000.hp1
NA19003.hp1
NA19003.hp2
NA19004.hp1
NA19005.hp1
NA19006.hp2
NA19007.hp1
NA19007.hp2
NA19009.hp2
NA19011.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp2
NA19057.hp2
NA19059.hp1
NA19060.hp2
NA19062.hp2
NA19063.hp2
NA19064.hp1
NA19064.hp2
NA19065.hp1
NA19067.hp2
NA19068.hp1
NA19070.hp1
NA19070.hp2
NA19074.hp2
NA19079.hp2
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19085.hp1
NA19086.hp1
NA19086.hp2
NA19089.hp1
NA19090.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20300.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+745G>C
c.610+745G>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985096
chr20:49985121 C
C
 T
T
 1 a0002c0002t0018g0020
a0002c0002t0018g0020
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.610+770C>T
c.610+770C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985121
chr20:49985331 G
G
 A
A
 1 a0001c0001t0004g0025
a0001c0001t0004g0025
 1 NA18990.hp2
NA18990.hp2
 intron_variant MODIFIER c.610+980G>A
c.610+980G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985331
chr20:49985371 A
A
 T
T
 4 a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
others(1): Show 
a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
a0001c0001t0017g0013
 16 HG01993.hp2
HG02083.hp1
HG02129.hp1
others(13): Show 
HG01993.hp2
HG02083.hp1
HG02129.hp1
HG02148.hp2
HG02165.hp1
HG02630.hp2
HG03453.hp2
NA18747.hp1
NA18961.hp1
NA18963.hp1
NA18979.hp2
NA18983.hp2
NA18989.hp1
NA19005.hp1
NA19006.hp2
NA19012.hp2
 intron_variant MODIFIER c.610+1020A>T
c.610+1020A>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985371
chr20:49985427 C
C
 A
A
 2 a0002c0002t0002g0017
a0002c0002t0015g0018
a0002c0002t0002g0017
a0002c0002t0015g0018
 2 HG01884.hp1
HG02615.hp1
HG01884.hp1
HG02615.hp1
 intron_variant MODIFIER c.610+1076C>A
c.610+1076C>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985427
chr20:49985490 G
G
 A
A
 1 a0001c0001t0004g0026
a0001c0001t0004g0026
 1 HG02015.hp2
HG02015.hp2
 intron_variant MODIFIER c.610+1139G>A
c.610+1139G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985490
chr20:49985579 T
T
 C
C
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+1228T>C
c.610+1228T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985579
chr20:49985621 T
T
 C
C
 4 a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
others(1): Show 
a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
a0001c0001t0017g0013
 16 HG01993.hp2
HG02083.hp1
HG02129.hp1
others(13): Show 
HG01993.hp2
HG02083.hp1
HG02129.hp1
HG02148.hp2
HG02165.hp1
HG02630.hp2
HG03453.hp2
NA18747.hp1
NA18961.hp1
NA18963.hp1
NA18979.hp2
NA18983.hp2
NA18989.hp1
NA19005.hp1
NA19006.hp2
NA19012.hp2
 intron_variant MODIFIER c.610+1270T>C
c.610+1270T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985621
chr20:49985642 C
C
 T
T
 1 a0001c0001t0004g0010
a0001c0001t0004g0010
 5 HG00423.hp1
HG02074.hp1
HG02080.hp2
others(2): Show 
HG00423.hp1
HG02074.hp1
HG02080.hp2
NA18990.hp1
NA19063.hp2
 intron_variant MODIFIER c.610+1291C>T
c.610+1291C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985642
chr20:49985706 T
T
 C
C
 1 a0005c0004t0002g0019
a0005c0004t0002g0019
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.610+1355T>C
c.610+1355T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985706
chr20:49985777 G
G
 C
C
 10 a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
others(7): Show 
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0011g0005
a0002c0002t0015g0018
a0003c0003t0007g0005
a0005c0004t0002g0019
 47 HG01106.hp2
HG01109.hp2
HG01243.hp1
others(44): Show 
HG01106.hp2
HG01109.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG02055.hp2
HG02280.hp2
HG02451.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp1
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03139.hp1
HG03139.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19240.hp1
NA19240.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+1426G>C
c.610+1426G>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985777
chr20:49985971 T
T
 C
C
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+1620T>C
c.610+1620T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985971
chr20:49985989 T
T
 C
C
 18 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(15): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 122 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(119): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+1638T>C
c.610+1638T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49985989
chr20:49986026 A
A
 G
G
 32 a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
others(29): Show 
a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
a0001c0001t0004g0025
a0001c0001t0004g0026
a0001c0001t0004g0027
a0001c0001t0005g0004
a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
a0001c0001t0008g0003
a0001c0001t0012g0003
a0001c0001t0013g0014
a0001c0001t0017g0013
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 211 HG00280.hp2
HG00323.hp1
HG00323.hp2
others(208): Show 
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00423.hp1
HG00423.hp2
HG00639.hp1
HG00642.hp2
HG00735.hp1
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01169.hp2
HG01175.hp2
HG01243.hp1
HG01255.hp2
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp2
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp2
HG02135.hp2
HG02145.hp1
HG02148.hp1
HG02148.hp2
HG02165.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18747.hp1
NA18939.hp1
NA18940.hp2
NA18941.hp1
NA18942.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18947.hp1
NA18948.hp2
NA18949.hp1
NA18953.hp1
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18959.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp2
NA18963.hp1
NA18963.hp2
NA18964.hp1
NA18966.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp2
NA18973.hp1
NA18973.hp2
NA18974.hp1
NA18975.hp1
NA18978.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18989.hp1
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18993.hp1
NA18994.hp2
NA18997.hp2
NA18999.hp2
NA19000.hp1
NA19003.hp1
NA19003.hp2
NA19004.hp1
NA19005.hp1
NA19006.hp2
NA19007.hp1
NA19007.hp2
NA19009.hp2
NA19011.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp2
NA19057.hp2
NA19059.hp1
NA19060.hp2
NA19062.hp2
NA19063.hp2
NA19064.hp1
NA19064.hp2
NA19065.hp1
NA19067.hp2
NA19068.hp1
NA19070.hp1
NA19070.hp2
NA19074.hp2
NA19079.hp2
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19085.hp1
NA19086.hp1
NA19086.hp2
NA19089.hp1
NA19090.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp1
NA20300.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+1675A>G
c.610+1675A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986026
chr20:49986030 G
G
 A
A
 1 a0001c0001t0001g0028
a0001c0001t0001g0028
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.610+1679G>A
c.610+1679G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986030
chr20:49986031 AG
AG
 A
A
 18 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(15): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 122 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(119): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+1683delG
c.610+1683delG
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 INFO_REALIGN_3_PRIME chr20 49986031
chr20:49986086 C
C
 G
G
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.610+1735C>G
c.610+1735C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986086
chr20:49986152 C
C
 G
G
 4 a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
others(1): Show 
a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
a0001c0001t0017g0013
 16 HG01993.hp2
HG02083.hp1
HG02129.hp1
others(13): Show 
HG01993.hp2
HG02083.hp1
HG02129.hp1
HG02148.hp2
HG02165.hp1
HG02630.hp2
HG03453.hp2
NA18747.hp1
NA18961.hp1
NA18963.hp1
NA18979.hp2
NA18983.hp2
NA18989.hp1
NA19005.hp1
NA19006.hp2
NA19012.hp2
 intron_variant MODIFIER c.611-1720C>G
c.611-1720C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986152
chr20:49986232 T
T
 TGCGAGTA
others(3): Show 
TGCGAGTAATG
 1 a0001c0001t0004g0027
a0001c0001t0004g0027
 1 NA18978.hp2
NA18978.hp2
 intron_variant MODIFIER c.611-1638_611-1637i
others(12): Show 
c.611-1638_611-1637insGAGTAATGGC
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 INFO_REALIGN_3_PRIME chr20 49986232
chr20:49986235 T
T
 A
A
 1 a0001c0001t0004g0027
a0001c0001t0004g0027
 1 NA18978.hp2
NA18978.hp2
 intron_variant MODIFIER c.611-1637T>A
c.611-1637T>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986235
chr20:49986306 T
T
 C
C
 9 a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
others(6): Show 
a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
a0001c0001t0004g0025
a0001c0001t0004g0026
a0001c0001t0004g0027
a0001c0001t0008g0003
a0001c0001t0012g0003
a0001c0001t0013g0014
 55 HG00408.hp1
HG00423.hp1
HG00423.hp2
others(52): Show 
HG00408.hp1
HG00423.hp1
HG00423.hp2
HG00738.hp2
HG02015.hp1
HG02015.hp2
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02132.hp2
HG02135.hp2
NA18939.hp1
NA18941.hp1
NA18942.hp2
NA18953.hp1
NA18954.hp1
NA18957.hp2
NA18959.hp2
NA18961.hp2
NA18962.hp2
NA18963.hp2
NA18966.hp1
NA18968.hp2
NA18970.hp2
NA18973.hp2
NA18974.hp1
NA18975.hp1
NA18978.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18993.hp1
NA18999.hp2
NA19000.hp1
NA19003.hp1
NA19004.hp1
NA19009.hp2
NA19054.hp2
NA19057.hp2
NA19059.hp1
NA19060.hp2
NA19062.hp2
NA19063.hp2
NA19064.hp1
NA19067.hp2
NA19070.hp1
NA19074.hp2
NA19079.hp2
NA19082.hp1
NA19084.hp1
NA19086.hp1
NA19086.hp2
NA19089.hp1
NA19090.hp1
NA20300.hp1
 intron_variant MODIFIER c.611-1566T>C
c.611-1566T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986306
chr20:49986350 A
A
 G
G
 1 a0001c0001t0001g0030
a0001c0001t0001g0030
 1 HG02109.hp1
HG02109.hp1
 intron_variant MODIFIER c.611-1522A>G
c.611-1522A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986350
chr20:49986366 C
C
 G
G
 1 a0001c0001t0001g0016
a0001c0001t0001g0016
 2 HG04204.hp1
NA20905.hp2
HG04204.hp1
NA20905.hp2
 intron_variant MODIFIER c.611-1506C>G
c.611-1506C>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986366
chr20:49986431 G
G
 A
A
 1 a0001c0001t0001g0015
a0001c0001t0001g0015
 2 HG02647.hp1
HG02717.hp2
HG02647.hp1
HG02717.hp2
 intron_variant MODIFIER c.611-1441G>A
c.611-1441G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986431
chr20:49986496 C
C
 T
T
 1 a0001c0001t0003g0029
a0001c0001t0003g0029
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.611-1376C>T
c.611-1376C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986496
chr20:49986529 G
G
 A
A
 18 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(15): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 125 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(122): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.611-1343G>A
c.611-1343G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986529
chr20:49986635 T
T
 TA
TA
 2 a0002c0002t0002g0006
a0002c0002t0002g0012
a0002c0002t0002g0006
a0002c0002t0002g0012
 17 HG01358.hp2
HG01361.hp2
HG01884.hp2
others(14): Show 
HG01358.hp2
HG01361.hp2
HG01884.hp2
HG01891.hp2
HG02055.hp2
HG02280.hp2
HG02559.hp1
HG02572.hp1
HG02615.hp2
HG02717.hp1
HG02809.hp2
HG02965.hp1
HG02976.hp1
HG03471.hp1
HG03486.hp2
HG03516.hp2
NA19030.hp1
 intron_variant MODIFIER c.611-1227dupA
c.611-1227dupA
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 INFO_REALIGN_3_PRIME chr20 49986635
chr20:49986643 A
A
 G
G
 1 a0001c0001t0010g0009
a0001c0001t0010g0009
 7 HG01167.hp1
HG02809.hp1
HG02886.hp1
others(4): Show 
HG01167.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02897.hp1
HG02922.hp2
HG02970.hp2
 intron_variant MODIFIER c.611-1229A>G
c.611-1229A>G
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986643
chr20:49986720 C
C
 A
A
 1 a0001c0001t0006g0024
a0001c0001t0006g0024
 1 HG01993.hp2
HG01993.hp2
 intron_variant MODIFIER c.611-1152C>A
c.611-1152C>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986720
chr20:49986787 G
G
 A
A
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.611-1085G>A
c.611-1085G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986787
chr20:49986882 GTT
GTT
 G
G
 19 a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
others(16): Show 
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 126 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(123): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.611-989_611-988del
others(2): Show 
c.611-989_611-988delTT
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986882
chr20:49986918 G
G
 A
A
 1 a0002c0002t0018g0020
a0002c0002t0018g0020
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.611-954G>A
c.611-954G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49986918
chr20:49987113 G
G
 C
C
 9 a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
others(6): Show 
a0001c0001t0004g0003
a0001c0001t0004g0010
a0001c0001t0004g0014
a0001c0001t0004g0025
a0001c0001t0004g0026
a0001c0001t0004g0027
a0001c0001t0008g0003
a0001c0001t0012g0003
a0001c0001t0013g0014
 55 HG00408.hp1
HG00423.hp1
HG00423.hp2
others(52): Show 
HG00408.hp1
HG00423.hp1
HG00423.hp2
HG00738.hp2
HG02015.hp1
HG02015.hp2
HG02074.hp1
HG02080.hp1
HG02080.hp2
HG02132.hp2
HG02135.hp2
NA18939.hp1
NA18941.hp1
NA18942.hp2
NA18953.hp1
NA18954.hp1
NA18957.hp2
NA18959.hp2
NA18961.hp2
NA18962.hp2
NA18963.hp2
NA18966.hp1
NA18968.hp2
NA18970.hp2
NA18973.hp2
NA18974.hp1
NA18975.hp1
NA18978.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18993.hp1
NA18999.hp2
NA19000.hp1
NA19003.hp1
NA19004.hp1
NA19009.hp2
NA19054.hp2
NA19057.hp2
NA19059.hp1
NA19060.hp2
NA19062.hp2
NA19063.hp2
NA19064.hp1
NA19067.hp2
NA19070.hp1
NA19074.hp2
NA19079.hp2
NA19082.hp1
NA19084.hp1
NA19086.hp1
NA19086.hp2
NA19089.hp1
NA19090.hp1
NA20300.hp1
 intron_variant MODIFIER c.611-759G>C
c.611-759G>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987113
chr20:49987119 C
C
 T
T
 11 a0001c0001t0005g0004
a0002c0002t0002g0005
a0002c0002t0002g0006
others(8): Show 
a0001c0001t0005g0004
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0011g0005
a0002c0002t0015g0018
a0003c0003t0007g0005
a0005c0004t0002g0019
 65 HG00280.hp2
HG00323.hp2
HG00639.hp1
others(62): Show 
HG00280.hp2
HG00323.hp2
HG00639.hp1
HG00735.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01167.hp2
HG01169.hp2
HG01243.hp1
HG01255.hp2
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01934.hp1
HG02055.hp2
HG02280.hp2
HG02451.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp1
HG02738.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03927.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18947.hp1
NA18986.hp1
NA19007.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19240.hp1
NA19240.hp2
NA21309.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.611-753C>T
c.611-753C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987119
chr20:49987350 G
G
 C
C
 13 a0001c0001t0005g0004
a0002c0002t0002g0002
a0002c0002t0002g0005
others(10): Show 
a0001c0001t0005g0004
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0011
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0016g0002
a0003c0003t0007g0005
a0004c0005t0002g0002
 114 HG00280.hp2
HG00323.hp1
HG00323.hp2
others(111): Show 
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00639.hp1
HG00642.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01169.hp2
HG01175.hp2
HG01255.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02300.hp2
HG02451.hp1
HG02486.hp2
HG02559.hp2
HG02572.hp2
HG02602.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp2
HG02723.hp1
HG02723.hp2
HG02738.hp2
HG02886.hp2
HG02896.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp2
HG03017.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03471.hp2
HG03486.hp1
HG03490.hp1
HG03516.hp1
HG03540.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18947.hp1
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp1
NA19007.hp2
NA19011.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.611-522G>C
c.611-522G>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987350
chr20:49987403 T
T
 C
C
 20 a0001c0001t0005g0004
a0002c0002t0002g0002
a0002c0002t0002g0005
others(17): Show 
a0001c0001t0005g0004
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 144 HG00280.hp2
HG00323.hp1
HG00323.hp2
others(141): Show 
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00639.hp1
HG00642.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01169.hp2
HG01175.hp2
HG01243.hp1
HG01255.hp2
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18947.hp1
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp1
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.611-469T>C
c.611-469T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987403
chr20:49987436 A
A
 C
C
 20 a0001c0001t0005g0004
a0002c0002t0002g0002
a0002c0002t0002g0005
others(17): Show 
a0001c0001t0005g0004
a0002c0002t0002g0002
a0002c0002t0002g0005
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0011g0005
a0002c0002t0014g0032
a0002c0002t0015g0018
a0002c0002t0016g0002
a0002c0002t0018g0020
a0003c0003t0007g0005
a0004c0005t0002g0002
a0005c0004t0002g0019
 144 HG00280.hp2
HG00323.hp1
HG00323.hp2
others(141): Show 
HG00280.hp2
HG00323.hp1
HG00323.hp2
HG00639.hp1
HG00642.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01099.hp2
HG01106.hp2
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp2
HG01169.hp2
HG01175.hp2
HG01243.hp1
HG01255.hp2
HG01358.hp2
HG01361.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02109.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp2
HG02809.hp2
HG02886.hp2
HG02895.hp2
HG02896.hp1
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18947.hp1
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18980.hp1
NA18986.hp1
NA18986.hp2
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19007.hp1
NA19007.hp2
NA19011.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA19240.hp2
NA20129.hp2
NA20300.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.611-436A>C
c.611-436A>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987436
chr20:49987540 T
T
 C
C
 2 a0001c0001t0006g0013
a0001c0001t0017g0013
a0001c0001t0006g0013
a0001c0001t0017g0013
 2 NA19005.hp1
NA19006.hp2
NA19005.hp1
NA19006.hp2
 intron_variant MODIFIER c.611-332T>C
c.611-332T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987540
chr20:49987710 G
G
 A
A
 2 a0001c0001t0004g0014
a0001c0001t0013g0014
a0001c0001t0004g0014
a0001c0001t0013g0014
 2 NA19054.hp2
NA19082.hp1
NA19054.hp2
NA19082.hp1
 intron_variant MODIFIER c.611-162G>A
c.611-162G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987710
chr20:49987739 T
T
 C
C
 19 a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
others(16): Show 
a0001c0001t0006g0007
a0001c0001t0006g0013
a0001c0001t0006g0024
a0001c0001t0017g0013
a0002c0002t0002g0002
a0002c0002t0002g0006
a0002c0002t0002g0008
a0002c0002t0002g0011
a0002c0002t0002g0012
a0002c0002t0002g0017
a0002c0002t0002g0021
a0002c0002t0002g0022
a0002c0002t0002g0023
a0002c0002t0007g0002
a0002c0002t0014g0032
a0002c0002t0016g0002
a0002c0002t0018g0020
a0004c0005t0002g0002
a0005c0004t0002g0019
 124 HG00323.hp1
HG00642.hp2
HG00738.hp1
others(121): Show 
HG00323.hp1
HG00642.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp2
HG01074.hp1
HG01123.hp1
HG01123.hp2
HG01175.hp2
HG01243.hp1
HG01358.hp2
HG01361.hp2
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp2
HG01993.hp2
HG02055.hp1
HG02055.hp2
HG02056.hp2
HG02083.hp1
HG02109.hp2
HG02129.hp1
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02165.hp1
HG02258.hp1
HG02273.hp2
HG02280.hp2
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02559.hp1
HG02572.hp1
HG02572.hp2
HG02602.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02896.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG03017.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03704.hp1
HG03831.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
NA18522.hp1
NA18747.hp1
NA18940.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18955.hp2
NA18961.hp1
NA18963.hp1
NA18964.hp1
NA18969.hp2
NA18973.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp2
NA18986.hp2
NA18989.hp1
NA18992.hp2
NA18994.hp2
NA18997.hp2
NA19003.hp2
NA19005.hp1
NA19006.hp2
NA19007.hp2
NA19011.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19064.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp2
NA19084.hp2
NA19085.hp1
NA19090.hp2
NA19240.hp1
NA20129.hp2
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.611-133T>C
c.611-133T>C
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987739
chr20:49987827 C
C
 T
T
 1 a0002c0002t0014g0032
a0002c0002t0014g0032
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.611-45C>T
c.611-45C>T
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987827
chr20:49987859 G
G
 A
A
 1 a0002c0002t0014g0032
a0002c0002t0014g0032
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.611-13G>A
c.611-13G>A
SNAI1 ENSG00000124216.4 transcript ENST00000244050.3 protein_coding 2/2 chr20 49987859

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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