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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   LST1_chr6_31581277_31593909  LST1_chr6_31581277_31593909 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 7940
ensemblid ENSG00000204482.11
hgncid 14189
symbol LST1
name leukocyte specific transcript 1
refseq_nuc NM_205839.3
refseq_prot NP_995311.2
ensembl_nuc ENST00000438075.7
ensembl_prot ENSP00000391929.3
mane_status MANE Select
chr chr6
start 31586277
end 31588909
strand +
ver v1.2
region chr6:31586277-31588909
region5000 chr6:31581277-31593909
regionname0 LST1_chr6_31586277_31588909
regionname5000 LST1_chr6_31581277_31593909

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 0/1 97 420 81 77 197 18 46 153 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0002 0/0 97 1 1 0 0 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0003 0/0 97 1 0 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0004 0/0 97 1 0 0 1 0 0 1 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/1 294 419 81 77 196 18 46 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
c0002 0/0 294 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
c0003 0/0 294 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
c0004 0/0 294 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
c0005 0/0 294 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 373 295 62 57 141 15 20 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
t0002 0/1 373 76 17 19 20 2 17 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
t0003 0/0 373 51 2 2 37 1 9 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
t0004 0/0 373 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 102 16 19 52 5 10 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0002 0/0 49 0 9 35 0 5 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0003 0/0 34 0 2 28 0 4 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0004 0/0 33 23 5 3 1 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0005 0/1 32 4 12 14 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0006 0/0 21 7 6 5 2 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0007 0/0 14 0 0 14 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0008 0/0 11 0 0 11 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0009 0/0 11 8 2 0 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0010 0/0 10 2 0 3 1 4 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0011 0/0 10 1 4 1 3 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0012 0/0 9 1 0 2 0 6 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0013 0/0 9 1 4 4 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0014 0/0 6 0 1 0 0 5 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0015 0/0 6 3 0 2 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0016 0/0 5 0 1 2 1 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0017 0/0 5 0 4 0 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0018 0/0 5 0 0 4 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0019 0/0 4 2 1 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0020 0/0 4 1 0 0 1 2 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0021 0/0 3 1 0 2 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0022 0/0 3 0 0 3 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0023 0/0 2 0 0 2 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0024 0/0 2 0 2 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0025 0/0 2 1 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0026 0/0 2 2 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0027 0/0 2 0 1 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0028 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0029 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0030 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0031 0/0 1 0 0 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0032 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0033 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0034 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0035 0/0 1 0 0 0 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0036 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0037 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0038 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0039 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0040 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0041 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0042 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0043 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0044 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0045 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0046 0/0 1 0 0 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0047 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0048 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0049 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0050 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0051 0/0 1 0 0 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0052 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0053 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
g0054 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/1 294 419 81 77 196 18 46 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0001c0002 0/0 294 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0002c0005 0/0 294 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0003c0004 0/0 294 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0004c0003 0/0 294 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 666 293 62 56 140 15 20 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0001c0001t0002 0/1 666 75 16 19 20 2 17 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0001c0001t0003 0/0 666 50 2 2 36 1 9 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0001c0001t0004 0/0 666 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0001c0002t0003 0/0 666 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0002c0005t0002 0/0 666 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0003c0004t0001 0/0 666 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909
a0004c0003t0001 0/0 666 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 copy fasta chr6 31581277 31593909

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 102 16 19 52 5 10 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0002 0/0 48 0 9 34 0 5 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0004 0/0 33 23 5 3 1 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0006 0/0 21 7 6 5 2 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0007 0/0 14 0 0 14 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0008 0/0 11 0 0 11 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0011 0/0 10 1 4 1 3 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0013 0/0 9 1 4 4 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0015 0/0 6 3 0 2 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0016 0/0 4 0 1 2 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0017 0/0 5 0 4 0 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0020 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0021 0/0 3 1 0 2 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0022 0/0 3 0 0 3 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0025 0/0 2 1 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0026 0/0 2 2 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0027 0/0 2 0 1 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0028 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0029 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0030 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0031 0/0 1 0 0 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0032 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0033 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0034 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0035 0/0 1 0 0 0 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0038 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0039 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0040 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0042 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0043 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0049 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0050 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0053 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0001g0054 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0005 0/1 32 4 12 14 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0009 0/0 10 7 2 0 1 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0012 0/0 9 1 0 2 0 6 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0014 0/0 6 0 1 0 0 5 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0016 0/0 1 0 0 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0019 0/0 4 2 1 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0020 0/0 3 0 0 0 1 2 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0023 0/0 2 0 0 2 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0024 0/0 2 0 2 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0037 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0041 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0046 0/0 1 0 0 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0048 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0051 0/0 1 0 0 0 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0002g0052 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0003g0003 0/0 33 0 2 27 0 4 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0003g0010 0/0 10 2 0 3 1 4 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0003g0018 0/0 5 0 0 4 0 1 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0003g0045 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0003g0047 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0001t0004g0036 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0001c0002t0003g0003 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0002c0005t0002g0009 0/0 1 1 0 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0003c0004t0001g0044 0/0 1 0 1 0 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
a0004c0003t0001g0002 0/0 1 0 0 1 0 0 LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0001 g0006 EUR GBR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00099 hp2 a0001 c0001 t0001 g0011 EUR GBR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00140 hp1 a0001 c0001 t0001 g0001 EUR GBR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00140 hp2 a0001 c0001 t0003 g0010 EUR GBR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00280 hp1 a0001 c0001 t0001 g0006 EUR FIN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00280 hp2 a0001 c0001 t0001 g0004 EUR FIN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00323 hp1 a0001 c0001 t0001 g0001 EUR FIN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00323 hp2 a0001 c0001 t0001 g0035 EUR FIN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00408 hp1 a0001 c0001 t0001 g0002 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00408 hp2 a0001 c0001 t0002 g0005 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00423 hp1 a0001 c0001 t0001 g0008 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00423 hp2 a0001 c0001 t0001 g0001 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00438 hp1 a0001 c0001 t0001 g0001 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00438 hp2 a0001 c0001 t0001 g0001 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00558 hp1 a0001 c0001 t0003 g0018 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00558 hp2 a0001 c0001 t0003 g0003 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00597 hp1 a0001 c0001 t0001 g0002 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00597 hp2 a0001 c0001 t0003 g0047 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00609 hp1 a0001 c0002 t0003 g0003 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00609 hp2 a0001 c0001 t0001 g0002 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00621 hp1 a0001 c0001 t0001 g0001 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00621 hp2 a0001 c0001 t0002 g0005 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00639 hp1 a0001 c0001 t0001 g0011 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00639 hp2 a0001 c0001 t0002 g0005 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00642 hp1 a0001 c0001 t0001 g0017 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00642 hp2 a0001 c0001 t0002 g0024 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00673 hp1 a0001 c0001 t0002 g0019 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00673 hp2 a0001 c0001 t0001 g0013 EAS CHS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00733 hp1 a0001 c0001 t0001 g0004 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00733 hp2 a0001 c0001 t0001 g0017 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00735 hp1 a0001 c0001 t0001 g0004 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00735 hp2 a0001 c0001 t0002 g0019 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00738 hp1 a0001 c0001 t0001 g0006 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00738 hp2 a0001 c0001 t0001 g0011 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00741 hp1 a0001 c0001 t0001 g0004 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG00741 hp2 a0001 c0001 t0003 g0003 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01069 hp1 a0001 c0001 t0001 g0011 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01069 hp2 a0001 c0001 t0001 g0006 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01070 hp1 a0001 c0001 t0001 g0001 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01070 hp2 a0001 c0001 t0001 g0006 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01071 hp1 a0001 c0001 t0001 g0001 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01071 hp2 a0001 c0001 t0001 g0011 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01074 hp1 a0001 c0001 t0001 g0001 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01074 hp2 a0001 c0001 t0001 g0027 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01081 hp1 a0001 c0001 t0002 g0024 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01081 hp2 a0001 c0001 t0003 g0003 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01099 hp1 a0001 c0001 t0001 g0001 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01099 hp2 a0001 c0001 t0002 g0005 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01106 hp1 a0001 c0001 t0001 g0016 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01106 hp2 a0001 c0001 t0002 g0005 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01109 hp1 a0001 c0001 t0001 g0006 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01109 hp2 a0001 c0001 t0001 g0002 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01167 hp1 a0001 c0001 t0001 g0013 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01167 hp2 a0001 c0001 t0002 g0009 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01168 hp1 a0001 c0001 t0002 g0005 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01168 hp2 a0001 c0001 t0002 g0005 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01169 hp1 a0001 c0001 t0002 g0009 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01169 hp2 a0001 c0001 t0002 g0005 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01243 hp1 a0001 c0001 t0001 g0006 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01243 hp2 a0001 c0001 t0001 g0001 AMR PUR LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01255 hp1 a0001 c0001 t0001 g0004 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01255 hp2 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01256 hp1 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01256 hp2 a0001 c0001 t0002 g0005 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01257 hp1 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01257 hp2 a0001 c0001 t0001 g0017 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01258 hp1 a0001 c0001 t0002 g0005 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01258 hp2 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01261 hp1 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01261 hp2 a0001 c0001 t0002 g0005 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01346 hp1 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01346 hp2 a0001 c0001 t0002 g0041 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01358 hp1 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01358 hp2 a0001 c0001 t0002 g0014 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01361 hp1 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01361 hp2 a0003 c0004 t0001 g0044 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01433 hp1 a0001 c0001 t0001 g0004 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01433 hp2 a0001 c0001 t0001 g0006 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01515 hp1 a0001 c0001 t0002 g0009 EUR IBS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01515 hp2 a0001 c0001 t0001 g0011 EUR IBS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01516 hp1 a0001 c0001 t0001 g0001 EUR IBS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01516 hp2 a0001 c0001 t0001 g0001 EUR IBS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01517 hp1 a0001 c0001 t0001 g0011 EUR IBS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01517 hp2 a0001 c0001 t0001 g0001 EUR IBS LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01891 hp1 a0001 c0001 t0001 g0004 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01891 hp2 a0001 c0001 t0001 g0004 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01934 hp1 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01934 hp2 a0001 c0001 t0002 g0005 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01943 hp1 a0001 c0001 t0001 g0001 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01943 hp2 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01952 hp1 a0001 c0001 t0001 g0013 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01952 hp2 a0001 c0001 t0001 g0001 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01975 hp1 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01975 hp2 a0001 c0001 t0001 g0040 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01981 hp1 a0001 c0001 t0001 g0039 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01981 hp2 a0001 c0001 t0001 g0033 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01993 hp1 a0001 c0001 t0002 g0005 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01993 hp2 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02004 hp1 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02004 hp2 a0001 c0001 t0001 g0013 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02015 hp1 a0001 c0001 t0001 g0001 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02015 hp2 a0001 c0001 t0001 g0001 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02027 hp1 a0001 c0001 t0001 g0002 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02027 hp2 a0001 c0001 t0002 g0005 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02040 hp1 a0001 c0001 t0001 g0029 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02040 hp2 a0001 c0001 t0001 g0021 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02055 hp1 a0001 c0001 t0002 g0048 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02055 hp2 a0001 c0001 t0001 g0001 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02056 hp1 a0001 c0001 t0001 g0013 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02056 hp2 a0001 c0001 t0001 g0002 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02071 hp1 a0001 c0001 t0001 g0032 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02071 hp2 a0001 c0001 t0001 g0001 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02080 hp1 a0001 c0001 t0003 g0010 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02080 hp2 a0001 c0001 t0001 g0006 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02083 hp1 a0001 c0001 t0001 g0004 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02083 hp2 a0001 c0001 t0003 g0010 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02129 hp1 a0001 c0001 t0001 g0028 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02129 hp2 a0001 c0001 t0001 g0006 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02132 hp1 a0001 c0001 t0001 g0001 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02132 hp2 a0001 c0001 t0001 g0002 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02148 hp1 a0001 c0001 t0001 g0017 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02148 hp2 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02155 hp1 a0001 c0001 t0001 g0004 EAS CDX LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02155 hp2 a0001 c0001 t0001 g0001 EAS CDX LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02165 hp1 a0001 c0001 t0001 g0008 EAS CDX LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02165 hp2 a0001 c0001 t0001 g0001 EAS CDX LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02257 hp1 a0001 c0001 t0001 g0011 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02257 hp2 a0001 c0001 t0001 g0004 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02258 hp1 a0001 c0001 t0001 g0004 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02258 hp2 a0001 c0001 t0001 g0001 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02273 hp1 a0001 c0001 t0001 g0001 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02273 hp2 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02280 hp1 a0001 c0001 t0001 g0026 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02280 hp2 a0001 c0001 t0001 g0034 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02293 hp1 a0001 c0001 t0001 g0002 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02293 hp2 a0001 c0001 t0001 g0001 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02300 hp1 a0001 c0001 t0001 g0013 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02300 hp2 a0001 c0001 t0001 g0001 AMR PEL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02451 hp1 a0001 c0001 t0001 g0004 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02451 hp2 a0001 c0001 t0002 g0009 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02523 hp1 a0001 c0001 t0001 g0021 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02523 hp2 a0001 c0001 t0001 g0008 EAS KHV LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02572 hp1 a0001 c0001 t0002 g0009 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02572 hp2 a0001 c0001 t0001 g0021 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02602 hp1 a0001 c0001 t0003 g0003 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02602 hp2 a0001 c0001 t0001 g0011 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02622 hp1 a0001 c0001 t0001 g0001 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02622 hp2 a0001 c0001 t0001 g0001 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02630 hp1 a0001 c0001 t0001 g0001 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02630 hp2 a0001 c0001 t0001 g0004 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02683 hp1 a0001 c0001 t0001 g0004 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02683 hp2 a0001 c0001 t0003 g0003 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02698 hp1 a0001 c0001 t0002 g0046 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02698 hp2 a0001 c0001 t0002 g0012 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02717 hp1 a0001 c0001 t0001 g0001 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02717 hp2 a0001 c0001 t0002 g0005 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02723 hp1 a0001 c0001 t0001 g0001 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02723 hp2 a0001 c0001 t0001 g0004 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02738 hp1 a0001 c0001 t0002 g0014 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02738 hp2 a0001 c0001 t0001 g0027 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02809 hp1 a0001 c0001 t0001 g0004 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02809 hp2 a0001 c0001 t0001 g0001 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02818 hp1 a0001 c0001 t0001 g0004 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02818 hp2 a0001 c0001 t0001 g0004 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02886 hp1 a0001 c0001 t0001 g0001 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02886 hp2 a0001 c0001 t0001 g0004 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02896 hp1 a0001 c0001 t0001 g0004 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02896 hp2 a0001 c0001 t0002 g0009 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02922 hp1 a0001 c0001 t0002 g0012 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02922 hp2 a0001 c0001 t0001 g0015 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02965 hp1 a0001 c0001 t0001 g0006 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02965 hp2 a0001 c0001 t0001 g0004 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02970 hp1 a0001 c0001 t0001 g0001 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02970 hp2 a0001 c0001 t0002 g0005 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02976 hp1 a0001 c0001 t0002 g0009 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02976 hp2 a0001 c0001 t0001 g0049 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03017 hp1 a0001 c0001 t0001 g0001 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03017 hp2 a0001 c0001 t0002 g0016 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03098 hp1 a0001 c0001 t0001 g0004 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03098 hp2 a0001 c0001 t0002 g0009 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03130 hp1 a0001 c0001 t0001 g0050 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03130 hp2 a0001 c0001 t0001 g0001 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03139 hp1 a0001 c0001 t0001 g0001 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03139 hp2 a0001 c0001 t0001 g0004 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03195 hp1 a0001 c0001 t0001 g0006 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03195 hp2 a0001 c0001 t0001 g0006 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03225 hp1 a0001 c0001 t0001 g0001 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03225 hp2 a0001 c0001 t0001 g0001 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03239 hp1 a0001 c0001 t0002 g0012 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03239 hp2 a0001 c0001 t0001 g0002 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03453 hp1 a0001 c0001 t0003 g0010 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03453 hp2 a0001 c0001 t0001 g0015 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03486 hp1 a0001 c0001 t0001 g0004 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03486 hp2 a0001 c0001 t0001 g0006 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03490 hp1 a0001 c0001 t0002 g0020 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03490 hp2 a0001 c0001 t0002 g0012 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03491 hp1 a0001 c0001 t0002 g0014 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03491 hp2 a0001 c0001 t0001 g0001 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03492 hp1 a0001 c0001 t0002 g0020 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03492 hp2 a0001 c0001 t0002 g0014 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03516 hp1 a0001 c0001 t0001 g0001 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03516 hp2 a0001 c0001 t0001 g0004 AFR ESN LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03540 hp1 a0001 c0001 t0001 g0015 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03540 hp2 a0001 c0001 t0002 g0009 AFR GWD LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03579 hp1 a0002 c0005 t0002 g0009 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03579 hp2 a0001 c0001 t0001 g0004 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03654 hp1 a0001 c0001 t0002 g0014 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03654 hp2 a0001 c0001 t0001 g0001 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03669 hp1 a0001 c0001 t0001 g0001 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03669 hp2 a0001 c0001 t0001 g0002 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03688 hp1 a0001 c0001 t0002 g0051 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03688 hp2 a0001 c0001 t0001 g0002 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03704 hp1 a0001 c0001 t0001 g0001 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03704 hp2 a0001 c0001 t0003 g0010 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03710 hp1 a0001 c0001 t0001 g0002 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03710 hp2 a0001 c0001 t0001 g0001 SAS PJL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03831 hp1 a0001 c0001 t0003 g0003 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03831 hp2 a0001 c0001 t0003 g0003 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03834 hp1 a0001 c0001 t0001 g0001 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03834 hp2 a0001 c0001 t0003 g0018 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03927 hp1 a0001 c0001 t0001 g0031 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03927 hp2 a0001 c0001 t0003 g0010 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04115 hp1 a0001 c0001 t0002 g0005 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04115 hp2 a0001 c0001 t0003 g0010 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04184 hp1 a0001 c0001 t0003 g0010 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04184 hp2 a0001 c0001 t0002 g0012 SAS BEB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04199 hp1 a0001 c0001 t0001 g0001 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04199 hp2 a0001 c0001 t0001 g0006 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04204 hp1 a0001 c0001 t0001 g0001 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04204 hp2 a0001 c0001 t0002 g0012 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04228 hp1 a0001 c0001 t0001 g0001 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG04228 hp2 a0001 c0001 t0002 g0012 SAS STU LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18522 hp1 a0001 c0001 t0002 g0005 AFR YRI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18522 hp2 a0001 c0001 t0001 g0006 AFR YRI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18612 hp1 a0001 c0001 t0003 g0018 EAS CHB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18612 hp2 a0001 c0001 t0003 g0010 EAS CHB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18747 hp1 a0001 c0001 t0001 g0002 EAS CHB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18747 hp2 a0001 c0001 t0001 g0001 EAS CHB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18906 hp1 a0001 c0001 t0001 g0004 AFR YRI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18906 hp2 a0001 c0001 t0001 g0006 AFR YRI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18939 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18939 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18942 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18942 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18943 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18943 hp2 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18945 hp1 a0001 c0001 t0001 g0022 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18945 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18946 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18946 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18948 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18948 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18950 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18950 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18951 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18951 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18952 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18952 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18953 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18953 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18954 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18954 hp2 a0001 c0001 t0001 g0004 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18956 hp1 a0001 c0001 t0003 g0045 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18956 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18960 hp1 a0001 c0001 t0001 g0025 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18960 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18961 hp1 a0001 c0001 t0002 g0052 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18961 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18962 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18962 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18963 hp1 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18963 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18964 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18964 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18966 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18966 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18967 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18967 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18968 hp1 a0004 c0003 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18968 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18969 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18969 hp2 a0001 c0001 t0001 g0053 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18970 hp1 a0001 c0001 t0001 g0015 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18970 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18971 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18971 hp2 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18973 hp1 a0001 c0001 t0001 g0030 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18973 hp2 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18974 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18974 hp2 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18975 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18975 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18978 hp1 a0001 c0001 t0001 g0011 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18978 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18979 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18979 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18980 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18980 hp2 a0001 c0001 t0001 g0054 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18981 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18981 hp2 a0001 c0001 t0002 g0012 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18982 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18982 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18983 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18983 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18984 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18984 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18985 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18985 hp2 a0001 c0001 t0001 g0016 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18986 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18986 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18987 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18987 hp2 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18989 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18989 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18990 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18990 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18992 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18992 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18994 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18994 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18995 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18995 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18997 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18997 hp2 a0001 c0001 t0002 g0023 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18998 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18998 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18999 hp1 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA18999 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19000 hp1 a0001 c0001 t0001 g0016 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19000 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19002 hp1 a0001 c0001 t0003 g0018 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19002 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19003 hp1 a0001 c0001 t0001 g0022 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19003 hp2 a0001 c0001 t0002 g0023 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19004 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19004 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19005 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19005 hp2 a0001 c0001 t0001 g0006 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19007 hp1 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19007 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19009 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19009 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19011 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19011 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19030 hp1 a0001 c0001 t0001 g0043 AFR LWK LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19030 hp2 a0001 c0001 t0002 g0019 AFR LWK LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19055 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19055 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19056 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19056 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19058 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19058 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19059 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19059 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19060 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19060 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19062 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19062 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19064 hp1 a0001 c0001 t0001 g0015 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19064 hp2 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19065 hp1 a0001 c0001 t0001 g0022 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19065 hp2 a0001 c0001 t0002 g0012 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19066 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19066 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19067 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19067 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19068 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19068 hp2 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19070 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19070 hp2 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19072 hp1 a0001 c0001 t0001 g0008 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19072 hp2 a0001 c0001 t0001 g0006 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19074 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19074 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19077 hp1 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19077 hp2 a0001 c0001 t0003 g0018 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19079 hp1 a0001 c0001 t0001 g0013 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19079 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19080 hp1 a0001 c0001 t0001 g0006 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19080 hp2 a0001 c0001 t0001 g0013 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19081 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19081 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19083 hp1 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19083 hp2 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19085 hp1 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19085 hp2 a0001 c0001 t0003 g0003 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19086 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19086 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19087 hp1 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19087 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19089 hp1 a0001 c0001 t0001 g0007 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19089 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19090 hp1 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19090 hp2 a0001 c0001 t0001 g0001 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19091 hp1 a0001 c0001 t0002 g0005 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19091 hp2 a0001 c0001 t0001 g0002 EAS JPT LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19240 hp1 a0001 c0001 t0001 g0004 AFR YRI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA19240 hp2 a0001 c0001 t0001 g0001 AFR YRI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20129 hp1 a0001 c0001 t0001 g0013 AFR ASW LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20129 hp2 a0001 c0001 t0002 g0037 AFR ASW LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20752 hp1 a0001 c0001 t0001 g0016 EUR TSI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20752 hp2 a0001 c0001 t0002 g0020 EUR TSI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20805 hp1 a0001 c0001 t0001 g0015 EUR TSI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20805 hp2 a0001 c0001 t0001 g0017 EUR TSI LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20905 hp1 a0001 c0001 t0001 g0002 SAS GIH LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20905 hp2 a0001 c0001 t0002 g0014 SAS GIH LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01123 hp1 a0001 c0001 t0001 g0001 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG01123 hp2 a0001 c0001 t0002 g0005 AMR CLM LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02109 hp1 a0001 c0001 t0002 g0019 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02109 hp2 a0001 c0001 t0001 g0020 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02486 hp1 a0001 c0001 t0001 g0004 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02486 hp2 a0001 c0001 t0002 g0009 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02559 hp1 a0001 c0001 t0002 g0005 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG02559 hp2 a0001 c0001 t0001 g0042 AFR ACB LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03471 hp1 a0001 c0001 t0001 g0026 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG03471 hp2 a0001 c0001 t0001 g0004 AFR MSL LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG06807 hp1 a0001 c0001 t0001 g0025 AFR USA LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
HG06807 hp2 a0001 c0001 t0004 g0036 AFR USA LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20300 hp1 a0001 c0001 t0001 g0038 AFR USA LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA20300 hp2 a0001 c0001 t0001 g0004 AFR USA LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA21309 hp1 a0001 c0001 t0003 g0010 AFR LWK LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
NA21309 hp2 a0001 c0001 t0001 g0006 AFR LWK LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909
homoSapiens_chm13v2 hp1 a0001 c0001 t0002 g0005 REF REF LST1_chr6_31581277_31593909 LST1 chr6 31581277 31593909

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr6:31587706 G
G
 T
T
 1 a0004
a0004
 1 NA18968.hp1
NA18968.hp1
 missense_variant MODERATE c.85G>T
c.85G>T
 p.Ala29Ser
p.Ala29Ser
 LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 3/5 224/666 85/294 29/97 chr6 31587706
chr6:31588518 G
G
 A
A
 1 a0003
a0003
 1 HG01361.hp2
HG01361.hp2
 missense_variant&splice_region_variant MODERATE c.136G>A
c.136G>A
 p.Ala46Thr
p.Ala46Thr
 LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 5/5 275/666 136/294 46/97 chr6 31588518
chr6:31588608 G
G
 T
T
 1 a0002
a0002
 1 HG03579.hp1
HG03579.hp1
 missense_variant MODERATE c.226G>T
c.226G>T
 p.Asp76Tyr
p.Asp76Tyr
 LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 5/5 365/666 226/294 76/97 chr6 31588608

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr6:31587308 G
G
 A
A
 1 a0001c0002
a0001c0002
 1 HG00609.hp1
HG00609.hp1
 synonymous_variant LOW c.9G>A
c.9G>A
 p.Ser3Ser
p.Ser3Ser
 LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 2/5 148/666 9/294 3/97 chr6 31587308
chr6:31587666 G
G
 A
A
 1 a0004c0003
a0004c0003
 1 NA18968.hp1
NA18968.hp1
 synonymous_variant LOW c.45G>A
c.45G>A
 p.Gly15Gly
p.Gly15Gly
 LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 3/5 184/666 45/294 15/97 chr6 31587666

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr6:31587240 G
G
 A
A
 1 a0001c0001t0004
a0001c0001t0004
 1 HG06807.hp2
HG06807.hp2
 5_prime_UTR_variant MODIFIER c.-60G>A
c.-60G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 2/5 60 chr6 31587240
chr6:31588804 T
T
 A
A
 5 a0001c0001t0002
a0001c0001t0003
a0001c0001t0004
others(2): Show 
a0001c0001t0002
a0001c0001t0003
a0001c0001t0004
a0001c0002t0003
a0002c0005t0002
 128 HG00140.hp2
HG00408.hp2
HG00558.hp1
others(125): Show 
HG00140.hp2
HG00408.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp2
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00642.hp2
HG00673.hp1
HG00735.hp2
HG00741.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01123.hp2
HG01167.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01256.hp2
HG01258.hp1
HG01261.hp2
HG01346.hp2
HG01358.hp2
HG01515.hp1
HG01934.hp2
HG01993.hp1
HG02027.hp2
HG02055.hp1
HG02080.hp1
HG02083.hp2
HG02109.hp1
HG02451.hp2
HG02486.hp2
HG02559.hp1
HG02572.hp1
HG02602.hp1
HG02683.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp2
HG02738.hp1
HG02896.hp2
HG02922.hp1
HG02970.hp2
HG02976.hp1
HG03017.hp2
HG03098.hp2
HG03239.hp1
HG03453.hp1
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03492.hp1
HG03492.hp2
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03704.hp2
HG03831.hp1
HG03831.hp2
HG03834.hp2
HG03927.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
HG06807.hp2
NA18522.hp1
NA18612.hp1
NA18612.hp2
NA18939.hp2
NA18946.hp1
NA18950.hp2
NA18952.hp1
NA18954.hp1
NA18956.hp1
NA18961.hp1
NA18962.hp2
NA18964.hp1
NA18968.hp2
NA18969.hp1
NA18971.hp2
NA18974.hp1
NA18974.hp2
NA18979.hp2
NA18981.hp1
NA18981.hp2
NA18982.hp2
NA18984.hp1
NA18985.hp1
NA18992.hp1
NA18997.hp2
NA18998.hp1
NA19000.hp2
NA19002.hp1
NA19003.hp2
NA19004.hp2
NA19009.hp2
NA19030.hp2
NA19058.hp2
NA19059.hp1
NA19059.hp2
NA19060.hp1
NA19060.hp2
NA19065.hp2
NA19066.hp1
NA19068.hp1
NA19068.hp2
NA19070.hp1
NA19074.hp1
NA19074.hp2
NA19077.hp2
NA19081.hp1
NA19083.hp1
NA19085.hp2
NA19091.hp1
NA20129.hp2
NA20752.hp2
NA20905.hp2
NA21309.hp1
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*128T>A
c.*128T>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 5/5 128 chr6 31588804
chr6:31588879 A
A
 T
T
 2 a0001c0001t0003
a0001c0002t0003
a0001c0001t0003
a0001c0002t0003
 51 HG00140.hp2
HG00558.hp1
HG00558.hp2
others(48): Show 
HG00140.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp2
HG00609.hp1
HG00741.hp2
HG01081.hp2
HG02080.hp1
HG02083.hp2
HG02602.hp1
HG02683.hp2
HG03453.hp1
HG03704.hp2
HG03831.hp1
HG03831.hp2
HG03834.hp2
HG03927.hp2
HG04115.hp2
HG04184.hp1
NA18612.hp1
NA18612.hp2
NA18939.hp2
NA18946.hp1
NA18950.hp2
NA18954.hp1
NA18956.hp1
NA18962.hp2
NA18968.hp2
NA18969.hp1
NA18974.hp1
NA18979.hp2
NA18981.hp1
NA18982.hp2
NA18984.hp1
NA18992.hp1
NA18998.hp1
NA19000.hp2
NA19002.hp1
NA19004.hp2
NA19009.hp2
NA19058.hp2
NA19059.hp2
NA19060.hp2
NA19066.hp1
NA19070.hp1
NA19074.hp2
NA19077.hp2
NA19081.hp1
NA19083.hp1
NA19085.hp2
NA21309.hp1
 3_prime_UTR_variant MODIFIER c.*203A>T
c.*203A>T
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 5/5 203 chr6 31588879

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr6:31586392 G
G
 C
C
 1 a0001c0001t0001g0028
a0001c0001t0001g0028
 1 HG02129.hp1
HG02129.hp1
 intron_variant MODIFIER c.-101+77G>C
c.-101+77G>C
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586392
chr6:31586570 C
C
 T
T
 1 a0001c0001t0001g0054
a0001c0001t0001g0054
 1 NA18980.hp2
NA18980.hp2
 intron_variant MODIFIER c.-101+255C>T
c.-101+255C>T
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586570
chr6:31586605 G
G
 A
A
 9 a0001c0001t0001g0002
a0001c0001t0001g0008
a0001c0001t0001g0029
others(6): Show 
a0001c0001t0001g0002
a0001c0001t0001g0008
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0002g0023
a0004c0003t0001g0002
 67 HG00408.hp1
HG00423.hp1
HG00597.hp1
others(64): Show 
HG00408.hp1
HG00423.hp1
HG00597.hp1
HG00609.hp2
HG01109.hp2
HG01934.hp1
HG01943.hp2
HG01975.hp1
HG01981.hp2
HG01993.hp2
HG02004.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp2
HG02071.hp1
HG02132.hp2
HG02148.hp2
HG02165.hp1
HG02273.hp2
HG02293.hp1
HG02523.hp2
HG03239.hp2
HG03669.hp2
HG03688.hp2
HG03710.hp1
HG03927.hp1
NA18747.hp1
NA18943.hp2
NA18951.hp2
NA18956.hp2
NA18964.hp2
NA18966.hp1
NA18966.hp2
NA18967.hp2
NA18968.hp1
NA18970.hp2
NA18971.hp1
NA18973.hp1
NA18973.hp2
NA18975.hp1
NA18979.hp1
NA18982.hp1
NA18983.hp2
NA18986.hp2
NA18987.hp2
NA18989.hp2
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18997.hp1
NA18997.hp2
NA18998.hp2
NA18999.hp1
NA19003.hp2
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19011.hp2
NA19056.hp1
NA19056.hp2
NA19064.hp2
NA19067.hp1
NA19070.hp2
NA19072.hp1
NA19077.hp1
NA19091.hp2
NA20905.hp1
 intron_variant MODIFIER c.-101+290G>A
c.-101+290G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586605
chr6:31586623 A
A
 G
G
 1 a0001c0001t0001g0027
a0001c0001t0001g0027
 2 HG01074.hp2
HG02738.hp2
HG01074.hp2
HG02738.hp2
 intron_variant MODIFIER c.-101+308A>G
c.-101+308A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586623
chr6:31586716 A
A
 G
G
 3 a0001c0001t0001g0013
a0001c0001t0001g0028
a0001c0001t0001g0053
a0001c0001t0001g0013
a0001c0001t0001g0028
a0001c0001t0001g0053
 11 HG00673.hp2
HG01167.hp1
HG01952.hp1
others(8): Show 
HG00673.hp2
HG01167.hp1
HG01952.hp1
HG02004.hp2
HG02056.hp1
HG02129.hp1
HG02300.hp1
NA18969.hp2
NA19079.hp1
NA19080.hp2
NA20129.hp1
 intron_variant MODIFIER c.-101+401A>G
c.-101+401A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586716
chr6:31586782 G
G
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 HG02280.hp2
HG02280.hp2
 intron_variant MODIFIER c.-100-418G>A
c.-100-418G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586782
chr6:31586830 T
T
 A
A
 3 a0001c0001t0001g0035
a0001c0001t0002g0012
a0001c0001t0002g0019
a0001c0001t0001g0035
a0001c0001t0002g0012
a0001c0001t0002g0019
 14 HG00323.hp2
HG00673.hp1
HG00735.hp2
others(11): Show 
HG00323.hp2
HG00673.hp1
HG00735.hp2
HG02109.hp1
HG02698.hp2
HG02922.hp1
HG03239.hp1
HG03490.hp2
HG04184.hp2
HG04204.hp2
HG04228.hp2
NA18981.hp2
NA19030.hp2
NA19065.hp2
 intron_variant MODIFIER c.-100-370T>A
c.-100-370T>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586830
chr6:31586839 C
C
 T
T
 1 a0001c0001t0003g0018
a0001c0001t0003g0018
 5 HG00558.hp1
HG03834.hp2
NA18612.hp1
others(2): Show 
HG00558.hp1
HG03834.hp2
NA18612.hp1
NA19002.hp1
NA19077.hp2
 intron_variant MODIFIER c.-100-361C>T
c.-100-361C>T
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586839
chr6:31586906 A
A
 G
G
 1 a0001c0001t0001g0026
a0001c0001t0001g0026
 2 HG02280.hp1
HG03471.hp1
HG02280.hp1
HG03471.hp1
 intron_variant MODIFIER c.-100-294A>G
c.-100-294A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586906
chr6:31586937 G
G
 C
C
 4 a0001c0001t0001g0035
a0001c0001t0002g0014
a0001c0001t0002g0037
others(1): Show 
a0001c0001t0001g0035
a0001c0001t0002g0014
a0001c0001t0002g0037
a0001c0001t0004g0036
 9 HG00323.hp2
HG01358.hp2
HG02738.hp1
others(6): Show 
HG00323.hp2
HG01358.hp2
HG02738.hp1
HG03491.hp1
HG03492.hp2
HG03654.hp1
HG06807.hp2
NA20129.hp2
NA20905.hp2
 intron_variant MODIFIER c.-100-263G>C
c.-100-263G>C
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31586937
chr6:31587104 G
G
 A
A
 1 a0001c0001t0001g0038
a0001c0001t0001g0038
 1 NA20300.hp1
NA20300.hp1
 intron_variant MODIFIER c.-100-96G>A
c.-100-96G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 1/4 chr6 31587104
chr6:31587353 A
A
 G
G
 41 a0001c0001t0001g0002
a0001c0001t0001g0004
a0001c0001t0001g0006
others(38): Show 
a0001c0001t0001g0002
a0001c0001t0001g0004
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0011
a0001c0001t0001g0013
a0001c0001t0001g0017
a0001c0001t0001g0020
a0001c0001t0001g0022
a0001c0001t0001g0026
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0043
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0002g0005
a0001c0001t0002g0012
a0001c0001t0002g0014
a0001c0001t0002g0019
a0001c0001t0002g0020
a0001c0001t0002g0023
a0001c0001t0002g0046
a0001c0001t0002g0048
a0001c0001t0002g0051
a0001c0001t0002g0052
a0001c0001t0003g0003
a0001c0001t0003g0010
a0001c0001t0003g0018
a0001c0001t0003g0045
a0001c0001t0003g0047
a0001c0002t0003g0003
a0003c0004t0001g0044
a0004c0003t0001g0002
 282 HG00099.hp1
HG00099.hp2
HG00140.hp2
others(279): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00423.hp1
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00673.hp2
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp2
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01123.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01243.hp1
HG01255.hp1
HG01256.hp2
HG01257.hp2
HG01258.hp1
HG01261.hp2
HG01358.hp2
HG01361.hp2
HG01433.hp1
HG01433.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01934.hp1
HG01934.hp2
HG01943.hp2
HG01952.hp1
HG01975.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02027.hp1
HG02027.hp2
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02056.hp2
HG02071.hp1
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02129.hp2
HG02132.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02165.hp1
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02273.hp2
HG02280.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02486.hp1
HG02523.hp2
HG02559.hp1
HG02602.hp1
HG02602.hp2
HG02630.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02896.hp1
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp2
HG02976.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03491.hp1
HG03492.hp1
HG03492.hp2
HG03516.hp2
HG03579.hp2
HG03654.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp2
HG03710.hp1
HG03831.hp1
HG03831.hp2
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18906.hp1
NA18906.hp2
NA18939.hp2
NA18942.hp2
NA18943.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18950.hp2
NA18951.hp2
NA18952.hp1
NA18954.hp1
NA18954.hp2
NA18956.hp1
NA18956.hp2
NA18961.hp1
NA18962.hp2
NA18963.hp1
NA18964.hp1
NA18964.hp2
NA18966.hp1
NA18966.hp2
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18970.hp2
NA18971.hp1
NA18971.hp2
NA18973.hp1
NA18973.hp2
NA18974.hp1
NA18974.hp2
NA18975.hp1
NA18978.hp1
NA18979.hp1
NA18979.hp2
NA18980.hp2
NA18981.hp1
NA18981.hp2
NA18982.hp1
NA18982.hp2
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18985.hp1
NA18986.hp2
NA18987.hp2
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18995.hp1
NA18995.hp2
NA18997.hp1
NA18997.hp2
NA18998.hp1
NA18998.hp2
NA18999.hp1
NA19000.hp2
NA19002.hp1
NA19002.hp2
NA19003.hp1
NA19003.hp2
NA19004.hp2
NA19005.hp1
NA19005.hp2
NA19007.hp1
NA19009.hp1
NA19009.hp2
NA19011.hp2
NA19030.hp1
NA19030.hp2
NA19056.hp1
NA19056.hp2
NA19058.hp2
NA19059.hp1
NA19059.hp2
NA19060.hp1
NA19060.hp2
NA19062.hp2
NA19064.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19068.hp2
NA19070.hp1
NA19070.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19080.hp1
NA19080.hp2
NA19081.hp1
NA19083.hp1
NA19083.hp2
NA19085.hp1
NA19085.hp2
NA19087.hp1
NA19089.hp1
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA20129.hp1
NA20300.hp2
NA20752.hp2
NA20805.hp2
NA20905.hp1
NA20905.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.19+35A>G
c.19+35A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 2/4 chr6 31587353
chr6:31587412 G
G
 A
A
 2 a0001c0001t0001g0021
a0001c0001t0001g0039
a0001c0001t0001g0021
a0001c0001t0001g0039
 4 HG01981.hp1
HG02040.hp2
HG02523.hp1
others(1): Show 
HG01981.hp1
HG02040.hp2
HG02523.hp1
HG02572.hp2
 intron_variant MODIFIER c.19+94G>A
c.19+94G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 2/4 chr6 31587412
chr6:31587615 C
C
 A
A
 17 a0001c0001t0001g0002
a0001c0001t0001g0004
a0001c0001t0001g0007
others(14): Show 
a0001c0001t0001g0002
a0001c0001t0001g0004
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0017
a0001c0001t0001g0022
a0001c0001t0001g0026
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0043
a0001c0001t0001g0054
a0003c0004t0001g0044
a0004c0003t0001g0002
 126 HG00280.hp2
HG00323.hp2
HG00408.hp1
others(123): Show 
HG00280.hp2
HG00323.hp2
HG00408.hp1
HG00423.hp1
HG00597.hp1
HG00609.hp2
HG00642.hp1
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00741.hp1
HG01109.hp2
HG01255.hp1
HG01257.hp2
HG01361.hp2
HG01433.hp1
HG01891.hp1
HG01891.hp2
HG01934.hp1
HG01943.hp2
HG01975.hp1
HG01981.hp2
HG01993.hp2
HG02004.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp2
HG02071.hp1
HG02083.hp1
HG02132.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02165.hp1
HG02257.hp2
HG02258.hp1
HG02273.hp2
HG02280.hp1
HG02293.hp1
HG02451.hp1
HG02486.hp1
HG02523.hp2
HG02630.hp2
HG02683.hp1
HG02723.hp2
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02896.hp1
HG02965.hp2
HG03098.hp1
HG03139.hp2
HG03239.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03516.hp2
HG03579.hp2
HG03669.hp2
HG03688.hp2
HG03710.hp1
HG03927.hp1
NA18747.hp1
NA18906.hp1
NA18942.hp2
NA18943.hp2
NA18945.hp1
NA18945.hp2
NA18951.hp2
NA18954.hp2
NA18956.hp2
NA18963.hp1
NA18964.hp2
NA18966.hp1
NA18966.hp2
NA18967.hp2
NA18968.hp1
NA18970.hp2
NA18971.hp1
NA18973.hp1
NA18973.hp2
NA18975.hp1
NA18979.hp1
NA18980.hp2
NA18982.hp1
NA18983.hp2
NA18984.hp2
NA18986.hp2
NA18987.hp2
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp2
NA18994.hp1
NA18995.hp1
NA18995.hp2
NA18997.hp1
NA18998.hp2
NA18999.hp1
NA19002.hp2
NA19003.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19011.hp2
NA19030.hp1
NA19056.hp1
NA19056.hp2
NA19062.hp2
NA19064.hp2
NA19065.hp1
NA19067.hp1
NA19070.hp2
NA19072.hp1
NA19077.hp1
NA19079.hp2
NA19083.hp2
NA19085.hp1
NA19087.hp1
NA19089.hp1
NA19091.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp2
NA20905.hp1
 intron_variant MODIFIER c.20-26C>A
c.20-26C>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 2/4 chr6 31587615
chr6:31587880 A
A
 G
G
 12 a0001c0001t0001g0006
a0001c0001t0001g0011
a0001c0001t0001g0020
others(9): Show 
a0001c0001t0001g0006
a0001c0001t0001g0011
a0001c0001t0001g0020
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0002g0005
a0001c0001t0002g0012
a0001c0001t0002g0019
a0001c0001t0002g0020
a0001c0001t0002g0023
a0001c0001t0002g0051
a0001c0001t0002g0052
 86 HG00099.hp1
HG00099.hp2
HG00280.hp1
others(83): Show 
HG00099.hp1
HG00099.hp2
HG00280.hp1
HG00408.hp2
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01070.hp2
HG01071.hp2
HG01099.hp2
HG01106.hp2
HG01109.hp1
HG01123.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01243.hp1
HG01256.hp2
HG01258.hp1
HG01261.hp2
HG01433.hp2
HG01515.hp2
HG01517.hp1
HG01934.hp2
HG01993.hp1
HG02027.hp2
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02129.hp2
HG02257.hp1
HG02559.hp1
HG02602.hp2
HG02698.hp2
HG02717.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp2
HG02976.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03239.hp1
HG03486.hp2
HG03490.hp1
HG03490.hp2
HG03492.hp1
HG03688.hp1
HG04115.hp1
HG04184.hp2
HG04199.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp2
NA18952.hp1
NA18961.hp1
NA18964.hp1
NA18971.hp2
NA18974.hp2
NA18978.hp1
NA18981.hp2
NA18985.hp1
NA18997.hp2
NA19003.hp2
NA19005.hp2
NA19030.hp2
NA19059.hp1
NA19060.hp1
NA19065.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp2
NA19074.hp1
NA19080.hp1
NA19091.hp1
NA20752.hp2
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.113-64A>G
c.113-64A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 3/4 chr6 31587880
chr6:31587988 G
G
 C
C
 1 a0001c0001t0001g0039
a0001c0001t0001g0039
 1 HG01981.hp1
HG01981.hp1
 intron_variant MODIFIER c.135+22G>C
c.135+22G>C
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31587988
chr6:31588041 G
G
 A
A
 1 a0001c0001t0003g0018
a0001c0001t0003g0018
 5 HG00558.hp1
HG03834.hp2
NA18612.hp1
others(2): Show 
HG00558.hp1
HG03834.hp2
NA18612.hp1
NA19002.hp1
NA19077.hp2
 intron_variant MODIFIER c.135+75G>A
c.135+75G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588041
chr6:31588062 G
G
 A
A
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 NA18969.hp2
NA18969.hp2
 intron_variant MODIFIER c.135+96G>A
c.135+96G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588062
chr6:31588224 A
A
 AAG
AAG
 3 a0001c0001t0001g0008
a0001c0001t0001g0029
a0001c0001t0001g0040
a0001c0001t0001g0008
a0001c0001t0001g0029
a0001c0001t0001g0040
 13 HG00423.hp1
HG01975.hp2
HG02040.hp1
others(10): Show 
HG00423.hp1
HG01975.hp2
HG02040.hp1
HG02165.hp1
HG02523.hp2
NA18943.hp2
NA18973.hp2
NA18987.hp2
NA18999.hp1
NA19007.hp1
NA19064.hp2
NA19070.hp2
NA19072.hp1
 intron_variant MODIFIER c.135+275_135+276dup
others(2): Show 
c.135+275_135+276dupAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588224
chr6:31588224 AAG
AAG
 A
A
 1 a0001c0001t0001g0015
a0001c0001t0001g0015
 6 HG02922.hp2
HG03453.hp2
HG03540.hp1
others(3): Show 
HG02922.hp2
HG03453.hp2
HG03540.hp1
NA18970.hp1
NA19064.hp1
NA20805.hp1
 intron_variant MODIFIER c.135+275_135+276del
others(2): Show 
c.135+275_135+276delAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588224
chr6:31588224 AAGAG
AAGAG
 A
A
 4 a0001c0001t0002g0005
a0001c0001t0002g0023
a0001c0001t0002g0051
others(1): Show 
a0001c0001t0002g0005
a0001c0001t0002g0023
a0001c0001t0002g0051
a0001c0001t0002g0052
 36 HG00408.hp2
HG00621.hp2
HG00639.hp2
others(33): Show 
HG00408.hp2
HG00621.hp2
HG00639.hp2
HG01099.hp2
HG01106.hp2
HG01123.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01256.hp2
HG01258.hp1
HG01261.hp2
HG01934.hp2
HG01993.hp1
HG02027.hp2
HG02559.hp1
HG02717.hp2
HG02970.hp2
HG03688.hp1
HG04115.hp1
NA18522.hp1
NA18952.hp1
NA18961.hp1
NA18964.hp1
NA18971.hp2
NA18974.hp2
NA18985.hp1
NA18997.hp2
NA19003.hp2
NA19059.hp1
NA19060.hp1
NA19068.hp1
NA19068.hp2
NA19074.hp1
NA19091.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.135+273_135+276del
others(4): Show 
c.135+273_135+276delAGAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588224
chr6:31588270 G
G
 A
A
 1 a0001c0001t0002g0024
a0001c0001t0002g0024
 2 HG00642.hp2
HG01081.hp1
HG00642.hp2
HG01081.hp1
 intron_variant MODIFIER c.136-248G>A
c.136-248G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588270
chr6:31588301 C
C
 G
G
 1 a0001c0001t0002g0037
a0001c0001t0002g0037
 1 NA20129.hp2
NA20129.hp2
 intron_variant MODIFIER c.136-217C>G
c.136-217C>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588301
chr6:31588328 GA
GA
 G
G
 1 a0001c0001t0003g0018
a0001c0001t0003g0018
 5 HG00558.hp1
HG03834.hp2
NA18612.hp1
others(2): Show 
HG00558.hp1
HG03834.hp2
NA18612.hp1
NA19002.hp1
NA19077.hp2
 intron_variant MODIFIER c.136-188delA
c.136-188delA
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588328
chr6:31588374 A
A
 AAG
AAG
 11 a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0020
others(8): Show 
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0020
a0001c0001t0001g0027
a0001c0001t0001g0035
a0001c0001t0002g0005
a0001c0001t0002g0012
a0001c0001t0002g0016
a0001c0001t0002g0020
a0001c0001t0002g0023
a0001c0001t0002g0046
 61 HG00323.hp2
HG00408.hp2
HG00621.hp2
others(58): Show 
HG00323.hp2
HG00408.hp2
HG00621.hp2
HG00639.hp2
HG00642.hp1
HG00733.hp2
HG01074.hp2
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01123.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01256.hp2
HG01257.hp2
HG01258.hp1
HG01261.hp2
HG01934.hp2
HG01993.hp1
HG02027.hp2
HG02109.hp2
HG02148.hp1
HG02559.hp1
HG02698.hp1
HG02698.hp2
HG02717.hp2
HG02738.hp2
HG02922.hp1
HG02970.hp2
HG03017.hp2
HG03239.hp1
HG03490.hp1
HG03490.hp2
HG03492.hp1
HG04115.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18952.hp1
NA18964.hp1
NA18971.hp2
NA18974.hp2
NA18981.hp2
NA18985.hp1
NA18985.hp2
NA18997.hp2
NA19000.hp1
NA19003.hp2
NA19059.hp1
NA19060.hp1
NA19065.hp2
NA19068.hp1
NA19068.hp2
NA19074.hp1
NA19091.hp1
NA20752.hp1
NA20752.hp2
NA20805.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.136-117_136-116dup
others(2): Show 
c.136-117_136-116dupAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588374
chr6:31588374 A
A
 AAGAG
AAGAG
 6 a0001c0001t0001g0034
a0001c0001t0002g0009
a0001c0001t0002g0051
others(3): Show 
a0001c0001t0001g0034
a0001c0001t0002g0009
a0001c0001t0002g0051
a0001c0001t0003g0003
a0001c0002t0003g0003
a0002c0005t0002g0009
 47 HG00558.hp2
HG00609.hp1
HG00741.hp2
others(44): Show 
HG00558.hp2
HG00609.hp1
HG00741.hp2
HG01081.hp2
HG01167.hp2
HG01169.hp1
HG01515.hp1
HG02280.hp2
HG02451.hp2
HG02486.hp2
HG02572.hp1
HG02602.hp1
HG02683.hp2
HG02896.hp2
HG02976.hp1
HG03098.hp2
HG03540.hp2
HG03579.hp1
HG03688.hp1
HG03831.hp1
HG03831.hp2
NA18939.hp2
NA18946.hp1
NA18950.hp2
NA18954.hp1
NA18962.hp2
NA18968.hp2
NA18969.hp1
NA18974.hp1
NA18979.hp2
NA18981.hp1
NA18982.hp2
NA18984.hp1
NA18992.hp1
NA18998.hp1
NA19000.hp2
NA19004.hp2
NA19009.hp2
NA19058.hp2
NA19059.hp2
NA19060.hp2
NA19066.hp1
NA19070.hp1
NA19074.hp2
NA19081.hp1
NA19083.hp1
NA19085.hp2
 intron_variant MODIFIER c.136-119_136-116dup
others(4): Show 
c.136-119_136-116dupAGAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588374
chr6:31588374 A
A
 AAGAGAG
AAGAGAG
 3 a0001c0001t0002g0024
a0001c0001t0002g0041
a0001c0001t0003g0045
a0001c0001t0002g0024
a0001c0001t0002g0041
a0001c0001t0003g0045
 4 HG00642.hp2
HG01081.hp1
HG01346.hp2
others(1): Show 
HG00642.hp2
HG01081.hp1
HG01346.hp2
NA18956.hp1
 intron_variant MODIFIER c.136-121_136-116dup
others(6): Show 
c.136-121_136-116dupAGAGAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588374
chr6:31588374 AAG
AAG
 A
A
 5 a0001c0001t0001g0049
a0001c0001t0002g0019
a0001c0001t0002g0037
others(2): Show 
a0001c0001t0001g0049
a0001c0001t0002g0019
a0001c0001t0002g0037
a0001c0001t0003g0018
a0001c0001t0004g0036
 12 HG00558.hp1
HG00673.hp1
HG00735.hp2
others(9): Show 
HG00558.hp1
HG00673.hp1
HG00735.hp2
HG02109.hp1
HG02976.hp2
HG03834.hp2
HG06807.hp2
NA18612.hp1
NA19002.hp1
NA19030.hp2
NA19077.hp2
NA20129.hp2
 intron_variant MODIFIER c.136-117_136-116del
others(2): Show 
c.136-117_136-116delAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588374
chr6:31588374 AAGAG
AAGAG
 A
A
 2 a0001c0001t0001g0006
a0001c0001t0001g0025
a0001c0001t0001g0006
a0001c0001t0001g0025
 23 HG00099.hp1
HG00280.hp1
HG00738.hp1
others(20): Show 
HG00099.hp1
HG00280.hp1
HG00738.hp1
HG01069.hp2
HG01070.hp2
HG01109.hp1
HG01243.hp1
HG01433.hp2
HG02080.hp2
HG02129.hp2
HG02965.hp1
HG03195.hp1
HG03195.hp2
HG03486.hp2
HG04199.hp2
HG06807.hp1
NA18522.hp2
NA18906.hp2
NA18960.hp1
NA19005.hp2
NA19072.hp2
NA19080.hp1
NA21309.hp2
 intron_variant MODIFIER c.136-119_136-116del
others(4): Show 
c.136-119_136-116delAGAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588374
chr6:31588374 AAGAGAG
AAGAGAG
 A
A
 2 a0001c0001t0002g0014
a0001c0001t0002g0048
a0001c0001t0002g0014
a0001c0001t0002g0048
 7 HG01358.hp2
HG02055.hp1
HG02738.hp1
others(4): Show 
HG01358.hp2
HG02055.hp1
HG02738.hp1
HG03491.hp1
HG03492.hp2
HG03654.hp1
NA20905.hp2
 intron_variant MODIFIER c.136-121_136-116del
others(6): Show 
c.136-121_136-116delAGAGAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588374
chr6:31588378 G
G
 GAA
GAA
 1 a0001c0001t0003g0010
a0001c0001t0003g0010
 10 HG00140.hp2
HG02080.hp1
HG02083.hp2
others(7): Show 
HG00140.hp2
HG02080.hp1
HG02083.hp2
HG03453.hp1
HG03704.hp2
HG03927.hp2
HG04115.hp2
HG04184.hp1
NA18612.hp2
NA21309.hp1
 intron_variant MODIFIER c.136-139_136-138ins
others(2): Show 
c.136-139_136-138insAA
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588378
chr6:31588395 A
A
 G
G
 1 a0001c0001t0001g0033
a0001c0001t0001g0033
 1 HG01981.hp2
HG01981.hp2
 intron_variant MODIFIER c.136-123A>G
c.136-123A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588395
chr6:31588399 A
A
 AGAGAGAG
others(1): Show 
AGAGAGAGG
 1 a0001c0001t0001g0008
a0001c0001t0001g0008
 11 HG00423.hp1
HG02165.hp1
HG02523.hp2
others(8): Show 
HG00423.hp1
HG02165.hp1
HG02523.hp2
NA18943.hp2
NA18973.hp2
NA18987.hp2
NA18999.hp1
NA19007.hp1
NA19064.hp2
NA19070.hp2
NA19072.hp1
 intron_variant MODIFIER c.136-116_136-115ins
others(8): Show 
c.136-116_136-115insAGAGGGAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588399
chr6:31588399 A
A
 AGG
AGG
 1 a0001c0001t0001g0007
a0001c0001t0001g0007
 14 NA18942.hp2
NA18945.hp2
NA18963.hp1
others(11): Show 
NA18942.hp2
NA18945.hp2
NA18963.hp1
NA18984.hp2
NA18990.hp2
NA18992.hp2
NA18995.hp2
NA19002.hp2
NA19062.hp2
NA19079.hp2
NA19083.hp2
NA19085.hp1
NA19087.hp1
NA19089.hp1
 intron_variant MODIFIER c.136-118_136-117ins
others(2): Show 
c.136-118_136-117insGG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588399
chr6:31588399 A
A
 G
G
 8 a0001c0001t0001g0004
a0001c0001t0001g0013
a0001c0001t0001g0026
others(5): Show 
a0001c0001t0001g0004
a0001c0001t0001g0013
a0001c0001t0001g0026
a0001c0001t0001g0028
a0001c0001t0001g0032
a0001c0001t0001g0050
a0001c0001t0001g0053
a0001c0001t0001g0054
 49 HG00280.hp2
HG00673.hp2
HG00733.hp1
others(46): Show 
HG00280.hp2
HG00673.hp2
HG00733.hp1
HG00735.hp1
HG00741.hp1
HG01167.hp1
HG01255.hp1
HG01433.hp1
HG01891.hp1
HG01891.hp2
HG01952.hp1
HG02004.hp2
HG02056.hp1
HG02071.hp1
HG02083.hp1
HG02129.hp1
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp1
HG02300.hp1
HG02451.hp1
HG02486.hp1
HG02630.hp2
HG02683.hp1
HG02723.hp2
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02896.hp1
HG02965.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03516.hp2
HG03579.hp2
NA18906.hp1
NA18954.hp2
NA18969.hp2
NA18980.hp2
NA19079.hp1
NA19080.hp2
NA19240.hp1
NA20129.hp1
NA20300.hp2
 intron_variant MODIFIER c.136-119A>G
c.136-119A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588399
chr6:31588402 G
G
 GAGAGAGA
others(4): Show 
GAGAGAGAGAGA
 1 a0001c0001t0001g0043
a0001c0001t0001g0043
 1 NA19030.hp1
NA19030.hp1
 intron_variant MODIFIER c.136-116_136-115ins
others(11): Show 
c.136-116_136-115insAGAGAGAGAGA
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588402
chr6:31588403 G
G
 A
A
 10 a0001c0001t0001g0004
a0001c0001t0001g0007
a0001c0001t0001g0008
others(7): Show 
a0001c0001t0001g0004
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0013
a0001c0001t0001g0026
a0001c0001t0001g0028
a0001c0001t0001g0030
a0001c0001t0001g0032
a0001c0001t0001g0053
a0001c0001t0001g0054
 74 HG00280.hp2
HG00423.hp1
HG00673.hp2
others(71): Show 
HG00280.hp2
HG00423.hp1
HG00673.hp2
HG00733.hp1
HG00735.hp1
HG00741.hp1
HG01167.hp1
HG01255.hp1
HG01433.hp1
HG01891.hp1
HG01891.hp2
HG01952.hp1
HG02004.hp2
HG02056.hp1
HG02071.hp1
HG02083.hp1
HG02129.hp1
HG02155.hp1
HG02165.hp1
HG02257.hp2
HG02258.hp1
HG02280.hp1
HG02300.hp1
HG02451.hp1
HG02486.hp1
HG02523.hp2
HG02630.hp2
HG02683.hp1
HG02723.hp2
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02896.hp1
HG02965.hp2
HG03098.hp1
HG03139.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03516.hp2
HG03579.hp2
NA18906.hp1
NA18942.hp2
NA18943.hp2
NA18945.hp2
NA18954.hp2
NA18963.hp1
NA18969.hp2
NA18973.hp1
NA18973.hp2
NA18980.hp2
NA18984.hp2
NA18987.hp2
NA18990.hp2
NA18992.hp2
NA18995.hp2
NA18999.hp1
NA19002.hp2
NA19007.hp1
NA19062.hp2
NA19064.hp2
NA19070.hp2
NA19072.hp1
NA19079.hp1
NA19079.hp2
NA19080.hp2
NA19083.hp2
NA19085.hp1
NA19087.hp1
NA19089.hp1
NA19240.hp1
NA20129.hp1
NA20300.hp2
 intron_variant MODIFIER c.136-115G>A
c.136-115G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588403
chr6:31588403 G
G
 GGAGA
GGAGA
 4 a0001c0001t0001g0002
a0001c0001t0001g0022
a0001c0001t0001g0029
others(1): Show 
a0001c0001t0001g0002
a0001c0001t0001g0022
a0001c0001t0001g0029
a0004c0003t0001g0002
 53 HG00408.hp1
HG00597.hp1
HG00609.hp2
others(50): Show 
HG00408.hp1
HG00597.hp1
HG00609.hp2
HG01109.hp2
HG01934.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp2
HG02004.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp2
HG02132.hp2
HG02148.hp2
HG02273.hp2
HG02293.hp1
HG03239.hp2
HG03669.hp2
HG03688.hp2
HG03710.hp1
NA18747.hp1
NA18945.hp1
NA18951.hp2
NA18956.hp2
NA18964.hp2
NA18966.hp1
NA18966.hp2
NA18967.hp2
NA18968.hp1
NA18970.hp2
NA18971.hp1
NA18975.hp1
NA18979.hp1
NA18982.hp1
NA18983.hp2
NA18986.hp2
NA18989.hp2
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18997.hp1
NA18998.hp2
NA19003.hp1
NA19005.hp1
NA19009.hp1
NA19011.hp2
NA19056.hp1
NA19056.hp2
NA19065.hp1
NA19067.hp1
NA19077.hp1
NA19091.hp2
NA20905.hp1
 intron_variant MODIFIER c.136-99_136-96dupAG
others(2): Show 
c.136-99_136-96dupAGAG
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 INFO_REALIGN_3_PRIME chr6 31588403
chr6:31588415 A
A
 G
G
 1 a0001c0001t0001g0042
a0001c0001t0001g0042
 1 HG02559.hp2
HG02559.hp2
 intron_variant MODIFIER c.136-103A>G
c.136-103A>G
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588415
chr6:31588428 G
G
 A
A
 1 a0001c0001t0003g0010
a0001c0001t0003g0010
 10 HG00140.hp2
HG02080.hp1
HG02083.hp2
others(7): Show 
HG00140.hp2
HG02080.hp1
HG02083.hp2
HG03453.hp1
HG03704.hp2
HG03927.hp2
HG04115.hp2
HG04184.hp1
NA18612.hp2
NA21309.hp1
 intron_variant MODIFIER c.136-90G>A
c.136-90G>A
LST1 ENSG00000204482.11 transcript ENST00000438075.7 protein_coding 4/4 chr6 31588428

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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