Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	54413
ensemblid	ENSG00000196338.15
hgncid	14289
symbol	NLGN3
name	neuroligin 3
refseq_nuc	NM_181303.2
refseq_prot	NP_851820.1
ensembl_nuc	ENST00000358741.4
ensembl_prot	ENSP00000351591.4
mane_status	MANE Select
chr	chrX
start	71144841
end	71171201
strand	+
ver	v1.2
region	chrX:71144841-71171201
region5000	chrX:71139841-71176201
regionname0	NLGN3_chrX_71144841_71171201
regionname5000	NLGN3_chrX_71139841_71176201

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	848	265	78	60	89	9	27	68	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0002	0/0	781	7	2	1	2	0	2	2	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0003	0/0	848	1	1	0	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0004	0/0	848	1	0	0	1	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0005	0/0	818	1	1	0	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0006	0/0	848	1	0	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0007	0/0	607	1	0	0	1	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0008	0/0	360	1	0	0	1	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	2547	258	73	60	88	9	26	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0002	0/0	2548	7	2	1	2	0	2	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0003	0/0	2547	4	4	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0004	0/0	2547	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0005	0/0	2547	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0006	0/0	2547	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0007	0/0	2554	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0008	0/0	2547	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0009	0/0	2546	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0010	0/0	2547	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0011	0/0	2547	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
c0012	0/0	2546	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1429	178	31	35	78	9	23	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0002	0/0	1431	67	37	21	4	0	5	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0003	0/0	1433	11	9	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0004	0/0	1430	7	0	1	6	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0005	0/0	1432	5	5	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0006	0/0	1430	3	0	1	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0007	0/0	1429	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0008	0/0	1426	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0009	0/0	1431	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0010	0/0	1428	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0011	0/0	1428	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0012	0/0	1429	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
t0013	0/0	1420	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	5	0	0	5	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0002	0/0	4	0	1	3	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0003	0/0	4	0	2	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0004	0/0	2	0	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0005	0/0	2	0	1	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0006	0/0	2	0	1	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0007	0/0	2	0	1	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0008	0/0	2	0	1	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0009	0/0	2	0	0	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0010	0/0	2	0	0	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0011	0/0	2	0	0	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0012	0/0	2	0	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0013	0/0	2	1	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0014	0/0	2	0	1	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0015	0/0	2	0	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0016	0/0	2	2	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0017	0/0	2	2	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0018	0/0	2	0	0	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0019	0/0	2	2	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0020	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0021	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0022	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0023	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0024	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0025	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0026	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0027	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0028	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0029	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0030	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0031	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0032	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0033	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0034	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0035	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0036	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0037	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0038	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0039	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0040	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0041	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0042	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0043	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0044	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0045	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0046	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0047	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0048	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0049	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0050	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0051	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0052	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0053	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0054	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0055	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0056	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0057	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0058	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0059	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0060	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0061	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0062	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0063	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0064	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0065	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0066	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0067	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0068	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0069	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0070	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0071	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0072	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0073	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0074	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0075	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0076	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0077	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0078	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0079	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0080	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0081	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0082	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0083	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0084	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0085	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0086	1/0	1	0	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0087	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0088	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0089	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0090	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0091	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0092	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0093	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0094	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0095	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0096	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0097	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0098	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0099	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0100	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0101	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0102	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0103	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0104	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0105	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0106	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0107	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0108	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0109	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0110	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0111	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0112	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0113	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0114	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0115	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0116	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0117	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0118	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0119	0/1	1	0	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0120	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0121	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0122	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0123	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0124	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0125	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0126	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0127	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0128	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0129	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0130	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0131	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0132	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0133	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0134	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0135	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0136	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0137	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0138	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0139	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0140	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0141	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0142	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0143	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0144	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0145	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0146	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0147	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0148	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0149	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0150	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0151	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0152	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0153	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0154	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0155	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0156	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0157	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0158	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0159	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0160	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0161	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0162	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0163	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0164	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0165	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0166	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0167	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0168	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0169	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0170	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0171	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0172	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0173	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0174	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0175	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0176	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0177	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0178	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0179	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0180	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0181	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0182	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0183	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0184	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0185	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0186	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0187	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0188	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0189	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0190	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0191	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0192	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0193	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0194	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0195	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0196	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0197	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0198	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0199	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0200	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0201	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0202	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0203	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0204	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0205	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0206	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0207	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0208	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0209	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0210	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0211	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0212	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0213	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0214	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0215	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0216	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0217	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0218	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0219	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0220	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0221	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0222	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0223	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0224	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0225	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0226	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0227	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0228	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0229	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0230	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0231	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0232	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0233	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0234	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0235	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0236	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0237	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0238	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0239	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0240	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0241	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0242	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0243	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0244	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0245	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0246	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0247	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0248	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0249	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0250	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0251	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
g0252	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	2547	258	73	60	88	9	26	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0003	0/0	2547	4	4	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0005	0/0	2547	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0008	0/0	2547	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0010	0/0	2547	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0002c0002	0/0	2548	7	2	1	2	0	2	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0003c0004	0/0	2547	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0004c0006	0/0	2547	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0005c0012	0/0	2546	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0006c0011	0/0	2547	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0007c0009	0/0	2546	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0008c0007	0/0	2554	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	3975	162	25	34	73	9	19	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0002	0/0	3977	65	35	21	4	0	5	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0003	0/0	3979	11	9	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0004	0/0	3976	7	0	1	6	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0005	0/0	3978	4	4	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0006	0/0	3976	3	0	1	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0007	0/0	3975	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0009	0/0	3977	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0010	0/0	3974	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0011	0/0	3974	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0012	0/0	3975	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0001t0013	0/0	3966	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0003t0001	0/0	3975	4	4	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0005t0001	0/0	3975	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0008t0001	0/0	3975	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0001c0010t0002	0/0	3977	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0002c0002t0001	0/0	3976	6	1	1	2	0	2	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0002c0002t0005	0/0	3979	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0003c0004t0002	0/0	3977	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0004c0006t0001	0/0	3975	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0005c0012t0001	0/0	3974	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0006c0011t0001	0/0	3975	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0007c0009t0001	0/0	3974	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201
a0008c0007t0008	0/0	3979	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	copy fasta	chrX	71139841	71176201

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	5	0	0	5	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0002	0/0	4	0	1	3	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0004	0/0	2	0	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0005	0/0	2	0	1	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0006	0/0	2	0	1	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0007	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0008	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0009	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0010	0/0	2	0	0	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0011	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0012	0/0	2	0	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0013	0/0	2	1	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0014	0/0	2	0	1	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0015	0/0	2	0	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0017	0/0	2	2	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0020	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0021	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0022	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0023	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0024	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0025	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0026	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0027	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0029	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0031	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0032	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0033	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0034	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0035	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0036	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0037	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0038	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0039	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0042	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0044	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0047	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0048	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0049	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0050	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0051	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0054	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0055	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0056	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0057	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0059	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0060	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0061	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0062	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0063	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0064	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0065	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0066	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0067	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0069	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0070	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0071	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0072	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0073	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0074	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0075	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0077	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0078	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0080	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0081	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0082	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0083	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0086	1/0	1	0	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0087	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0088	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0089	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0090	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0091	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0093	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0094	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0096	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0097	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0098	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0100	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0101	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0102	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0103	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0104	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0105	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0106	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0108	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0109	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0110	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0113	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0114	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0115	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0116	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0119	0/1	1	0	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0120	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0121	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0124	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0125	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0126	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0127	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0128	0/0	1	0	0	0	1	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0131	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0133	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0138	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0139	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0141	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0142	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0145	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0148	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0149	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0159	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0160	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0161	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0164	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0165	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0167	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0176	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0179	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0187	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0188	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0191	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0192	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0193	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0196	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0207	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0208	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0209	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0211	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0212	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0218	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0219	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0220	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0221	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0222	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0231	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0232	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0233	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0234	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0240	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0001g0250	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0003	0/0	2	0	2	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0016	0/0	2	2	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0058	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0107	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0122	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0130	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0135	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0140	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0143	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0144	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0150	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0151	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0152	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0153	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0154	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0156	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0158	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0162	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0168	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0170	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0171	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0172	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0173	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0174	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0175	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0177	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0178	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0180	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0181	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0183	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0184	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0185	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0186	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0189	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0190	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0197	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0198	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0199	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0200	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0201	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0202	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0203	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0204	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0205	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0215	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0216	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0217	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0223	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0224	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0225	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0226	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0227	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0228	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0229	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0230	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0235	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0236	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0237	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0238	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0239	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0243	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0244	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0002g0252	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0019	0/0	2	2	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0099	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0163	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0166	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0169	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0245	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0246	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0247	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0248	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0003g0249	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0004g0003	0/0	2	0	0	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0004g0018	0/0	2	0	0	2	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0004g0241	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0004g0242	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0004g0251	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0005g0111	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0005g0112	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0005g0132	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0005g0194	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0006g0011	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0006g0028	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0006g0195	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0007g0118	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0009g0095	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0010g0147	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0011g0206	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0012g0007	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0001t0013g0079	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0003t0001g0129	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0003t0001g0136	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0003t0001g0137	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0003t0001g0182	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0005t0001g0117	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0008t0001g0043	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0001c0010t0002g0157	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0002c0002t0001g0008	0/0	1	0	1	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0002c0002t0001g0084	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0002c0002t0001g0085	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0002c0002t0001g0092	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0002c0002t0001g0210	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0002c0002t0001g0214	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0002c0002t0005g0146	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0003c0004t0002g0155	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0004c0006t0001g0009	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0005c0012t0001g0123	0/0	1	1	0	0	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0006c0011t0001g0134	0/0	1	0	0	0	0	1	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0007c0009t0001g0213	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
a0008c0007t0008g0052	0/0	1	0	0	1	0	0	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0128	EUR	GBR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00099	hp2	a0001	c0001	t0001	g0090	EUR	GBR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00140	hp1	a0001	c0001	t0001	g0116	EUR	GBR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00280	hp1	a0001	c0001	t0001	g0093	EUR	FIN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00323	hp1	a0001	c0001	t0001	g0023	EUR	FIN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00323	hp2	a0001	c0001	t0001	g0022	EUR	FIN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00609	hp1	a0001	c0001	t0001	g0103	EAS	CHS	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00621	hp1	a0001	c0001	t0001	g0067	EAS	CHS	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00639	hp1	a0001	c0001	t0001	g0071	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00639	hp2	a0001	c0001	t0002	g0239	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00642	hp1	a0001	c0001	t0001	g0012	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00673	hp1	a0001	c0001	t0002	g0230	EAS	CHS	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00733	hp1	a0001	c0001	t0001	g0044	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00733	hp2	a0001	c0001	t0001	g0013	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00735	hp1	a0001	c0001	t0001	g0024	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00735	hp2	a0001	c0001	t0002	g0252	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00738	hp1	a0001	c0001	t0001	g0212	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00741	hp1	a0001	c0001	t0001	g0164	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG00741	hp2	a0001	c0001	t0001	g0081	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01069	hp1	a0001	c0001	t0001	g0004	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01070	hp1	a0001	c0001	t0001	g0125	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01070	hp2	a0001	c0001	t0001	g0127	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01071	hp1	a0001	c0001	t0001	g0014	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01071	hp2	a0001	c0001	t0001	g0004	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01074	hp1	a0001	c0001	t0001	g0027	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01081	hp1	a0001	c0001	t0002	g0204	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01081	hp2	a0001	c0001	t0001	g0115	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01099	hp1	a0001	c0001	t0001	g0126	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01106	hp1	a0001	c0001	t0007	g0118	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01109	hp1	a0001	c0001	t0002	g0229	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01167	hp1	a0001	c0001	t0001	g0015	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01168	hp1	a0001	c0001	t0001	g0106	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01168	hp2	a0001	c0001	t0002	g0003	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01169	hp1	a0001	c0001	t0002	g0243	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01169	hp2	a0001	c0001	t0001	g0015	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01175	hp1	a0001	c0001	t0001	g0124	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01175	hp2	a0001	c0001	t0006	g0028	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01192	hp1	a0001	c0001	t0001	g0114	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01243	hp1	a0001	c0001	t0002	g0172	AMR	PUR	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01255	hp1	a0001	c0001	t0003	g0169	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01256	hp1	a0001	c0001	t0002	g0215	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01257	hp1	a0001	c0001	t0001	g0005	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01257	hp2	a0001	c0001	t0002	g0224	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01258	hp1	a0001	c0001	t0002	g0227	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01261	hp1	a0001	c0001	t0001	g0029	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01346	hp1	a0001	c0001	t0001	g0088	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01346	hp2	a0001	c0001	t0001	g0042	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01358	hp1	a0001	c0001	t0001	g0102	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01361	hp1	a0001	c0001	t0001	g0026	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01361	hp2	a0001	c0001	t0002	g0162	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01433	hp1	a0002	c0002	t0001	g0008	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01496	hp1	a0001	c0001	t0004	g0251	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01496	hp2	a0001	c0001	t0001	g0039	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01515	hp1	a0001	c0001	t0001	g0049	EUR	IBS	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01884	hp1	a0001	c0001	t0003	g0019	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01884	hp2	a0001	c0001	t0001	g0160	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01891	hp1	a0001	c0001	t0001	g0211	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01891	hp2	a0001	c0001	t0002	g0177	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01928	hp1	a0001	c0001	t0001	g0007	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01934	hp1	a0001	c0001	t0002	g0216	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01943	hp1	a0001	c0001	t0002	g0236	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01952	hp1	a0001	c0001	t0002	g0225	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01975	hp2	a0001	c0001	t0002	g0228	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01978	hp1	a0001	c0001	t0002	g0235	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01978	hp2	a0001	c0001	t0001	g0098	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01993	hp1	a0001	c0001	t0003	g0099	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01993	hp2	a0001	c0001	t0002	g0237	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02027	hp1	a0001	c0001	t0001	g0032	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02040	hp1	a0001	c0001	t0001	g0033	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02055	hp1	a0001	c0001	t0001	g0179	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02056	hp1	a0001	c0001	t0001	g0209	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02071	hp1	a0001	c0001	t0012	g0007	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02074	hp1	a0001	c0001	t0001	g0020	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02080	hp1	a0001	c0001	t0004	g0241	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02080	hp2	a0001	c0001	t0001	g0061	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02083	hp1	a0001	c0001	t0001	g0222	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02129	hp1	a0001	c0001	t0001	g0035	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02132	hp1	a0001	c0001	t0001	g0082	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02135	hp1	a0001	c0001	t0001	g0002	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02145	hp1	a0001	c0001	t0003	g0248	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02165	hp1	a0001	c0001	t0010	g0147	EAS	CDX	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02165	hp2	a0001	c0001	t0004	g0003	EAS	CDX	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02257	hp1	a0001	c0001	t0002	g0150	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02257	hp2	a0001	c0001	t0001	g0017	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02258	hp1	a0001	c0001	t0005	g0111	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02273	hp1	a0001	c0001	t0002	g0003	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02273	hp2	a0001	c0001	t0001	g0240	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02280	hp1	a0001	c0001	t0001	g0187	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02280	hp2	a0001	c0001	t0002	g0130	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02293	hp1	a0001	c0001	t0001	g0006	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02293	hp2	a0001	c0001	t0002	g0238	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02300	hp1	a0001	c0001	t0002	g0226	AMR	PEL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02451	hp1	a0001	c0001	t0002	g0200	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02451	hp2	a0001	c0003	t0001	g0129	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02523	hp1	a0001	c0008	t0001	g0043	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02523	hp2	a0001	c0001	t0001	g0145	EAS	KHV	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02572	hp1	a0001	c0001	t0001	g0109	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02602	hp1	a0001	c0001	t0001	g0091	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02615	hp1	a0002	c0002	t0005	g0146	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02615	hp2	a0001	c0003	t0001	g0137	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02622	hp1	a0001	c0001	t0003	g0166	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02622	hp2	a0001	c0001	t0001	g0192	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02630	hp1	a0001	c0003	t0001	g0136	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02630	hp2	a0001	c0001	t0001	g0013	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02647	hp1	a0001	c0001	t0002	g0156	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02683	hp1	a0001	c0005	t0001	g0117	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02683	hp2	a0001	c0001	t0001	g0038	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02698	hp1	a0001	c0001	t0001	g0142	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02717	hp1	a0001	c0001	t0002	g0173	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02723	hp1	a0001	c0010	t0002	g0157	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02723	hp2	a0001	c0001	t0002	g0135	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02735	hp1	a0001	c0001	t0001	g0057	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02738	hp1	a0002	c0002	t0001	g0084	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02809	hp1	a0001	c0001	t0003	g0245	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02809	hp2	a0001	c0001	t0002	g0186	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02818	hp1	a0001	c0001	t0001	g0167	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02818	hp2	a0001	c0001	t0001	g0250	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02886	hp1	a0001	c0001	t0002	g0197	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02886	hp2	a0001	c0001	t0005	g0132	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02895	hp1	a0001	c0001	t0002	g0184	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02896	hp1	a0001	c0001	t0001	g0108	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02896	hp2	a0001	c0001	t0002	g0151	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02897	hp1	a0001	c0001	t0002	g0185	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02897	hp2	a0001	c0001	t0001	g0113	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02922	hp1	a0001	c0001	t0002	g0158	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02922	hp2	a0001	c0001	t0002	g0205	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02965	hp1	a0001	c0001	t0001	g0017	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02970	hp1	a0001	c0001	t0002	g0198	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02970	hp2	a0001	c0001	t0002	g0154	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02976	hp1	a0001	c0001	t0001	g0208	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02976	hp2	a0001	c0001	t0002	g0174	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03017	hp1	a0006	c0011	t0001	g0134	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03041	hp1	a0003	c0004	t0002	g0155	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03041	hp2	a0001	c0001	t0003	g0249	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03098	hp1	a0001	c0001	t0002	g0189	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03130	hp1	a0001	c0001	t0001	g0191	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03139	hp1	a0001	c0001	t0002	g0183	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03195	hp1	a0001	c0001	t0001	g0054	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03195	hp2	a0001	c0001	t0001	g0196	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03209	hp1	a0001	c0001	t0001	g0110	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03225	hp1	a0001	c0001	t0002	g0168	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03239	hp1	a0001	c0001	t0001	g0062	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03239	hp2	a0001	c0001	t0002	g0175	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03453	hp1	a0001	c0001	t0002	g0199	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03453	hp2	a0001	c0001	t0003	g0247	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03486	hp1	a0001	c0001	t0001	g0188	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03486	hp2	a0001	c0001	t0002	g0180	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03490	hp1	a0001	c0001	t0001	g0234	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03492	hp1	a0001	c0001	t0001	g0087	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03516	hp1	a0001	c0001	t0002	g0152	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03516	hp2	a0001	c0001	t0002	g0203	AFR	ESN	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03540	hp1	a0001	c0001	t0002	g0107	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03540	hp2	a0001	c0001	t0002	g0223	AFR	GWD	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03579	hp1	a0005	c0012	t0001	g0123	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03654	hp1	a0001	c0001	t0001	g0104	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03669	hp1	a0001	c0001	t0001	g0025	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03669	hp2	a0001	c0001	t0002	g0122	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03688	hp1	a0001	c0001	t0001	g0056	SAS	STU	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03704	hp1	a0001	c0001	t0001	g0034	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03704	hp2	a0001	c0001	t0001	g0176	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03710	hp1	a0001	c0001	t0001	g0165	SAS	PJL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03831	hp1	a0001	c0001	t0001	g0073	SAS	BEB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03831	hp2	a0001	c0001	t0002	g0143	SAS	BEB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03834	hp1	a0001	c0001	t0002	g0144	SAS	BEB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03834	hp2	a0001	c0001	t0011	g0206	SAS	BEB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03942	hp1	a0001	c0001	t0001	g0141	SAS	BEB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG04115	hp1	a0001	c0001	t0002	g0217	SAS	STU	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG04184	hp1	a0002	c0002	t0001	g0092	SAS	BEB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG04184	hp2	a0001	c0001	t0009	g0095	SAS	BEB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG04199	hp1	a0001	c0001	t0001	g0074	SAS	STU	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG04204	hp1	a0001	c0001	t0001	g0231	SAS	STU	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG04228	hp1	a0001	c0001	t0001	g0138	SAS	STU	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18522	hp1	a0001	c0001	t0005	g0112	AFR	YRI	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18612	hp1	a0001	c0001	t0001	g0041	EAS	CHB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18906	hp1	a0001	c0001	t0002	g0016	AFR	YRI	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18906	hp2	a0001	c0001	t0002	g0190	AFR	YRI	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18940	hp1	a0001	c0001	t0001	g0010	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18941	hp1	a0004	c0006	t0001	g0009	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18941	hp2	a0001	c0001	t0001	g0097	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18943	hp1	a0001	c0001	t0001	g0030	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18944	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18945	hp1	a0001	c0001	t0004	g0018	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18947	hp1	a0001	c0001	t0001	g0149	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18947	hp2	a0001	c0001	t0001	g0221	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18948	hp1	a0001	c0001	t0001	g0031	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18951	hp1	a0001	c0001	t0001	g0002	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18951	hp2	a0001	c0001	t0001	g0220	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18952	hp1	a0001	c0001	t0001	g0011	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18953	hp1	a0001	c0001	t0004	g0018	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18954	hp1	a0001	c0001	t0001	g0219	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18954	hp2	a0001	c0001	t0001	g0006	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18959	hp1	a0001	c0001	t0001	g0078	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18960	hp1	a0001	c0001	t0001	g0055	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18961	hp1	a0001	c0001	t0001	g0089	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18962	hp1	a0001	c0001	t0001	g0064	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18964	hp2	a0001	c0001	t0001	g0036	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18965	hp1	a0001	c0001	t0001	g0233	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18966	hp1	a0001	c0001	t0001	g0040	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18967	hp1	a0001	c0001	t0001	g0072	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18970	hp1	a0001	c0001	t0004	g0003	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18971	hp1	a0001	c0001	t0001	g0009	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18974	hp1	a0001	c0001	t0001	g0105	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18977	hp1	a0001	c0001	t0001	g0069	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18979	hp1	a0001	c0001	t0001	g0070	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18979	hp2	a0001	c0001	t0001	g0008	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18983	hp1	a0001	c0001	t0001	g0065	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18984	hp1	a0001	c0001	t0001	g0207	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18989	hp1	a0001	c0001	t0001	g0083	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18990	hp1	a0002	c0002	t0001	g0085	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18991	hp1	a0001	c0001	t0001	g0048	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18991	hp2	a0001	c0001	t0001	g0047	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18994	hp1	a0007	c0009	t0001	g0213	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18995	hp1	a0001	c0001	t0001	g0037	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18998	hp2	a0001	c0001	t0001	g0053	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18999	hp1	a0001	c0001	t0001	g0139	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18999	hp2	a0001	c0001	t0002	g0201	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19000	hp1	a0001	c0001	t0006	g0011	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19004	hp1	a0001	c0001	t0001	g0045	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19005	hp1	a0001	c0001	t0001	g0232	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19006	hp1	a0008	c0007	t0008	g0052	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19007	hp1	a0001	c0001	t0001	g0218	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19009	hp1	a0001	c0001	t0001	g0066	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19010	hp1	a0001	c0001	t0001	g0096	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19010	hp2	a0001	c0001	t0001	g0050	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19012	hp1	a0001	c0001	t0006	g0195	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19030	hp1	a0001	c0001	t0001	g0193	AFR	LWK	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19030	hp2	a0002	c0002	t0001	g0210	AFR	LWK	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19043	hp1	a0001	c0001	t0002	g0016	AFR	LWK	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19056	hp1	a0001	c0001	t0002	g0244	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19058	hp1	a0001	c0001	t0001	g0161	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19060	hp1	a0001	c0001	t0001	g0101	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19062	hp1	a0001	c0001	t0001	g0021	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19063	hp1	a0001	c0001	t0001	g0063	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19065	hp1	a0001	c0001	t0001	g0068	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19065	hp2	a0001	c0001	t0001	g0059	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19066	hp1	a0001	c0001	t0001	g0159	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19067	hp1	a0001	c0001	t0001	g0100	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19068	hp1	a0001	c0001	t0001	g0046	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19070	hp1	a0001	c0001	t0013	g0079	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19076	hp1	a0001	c0001	t0004	g0242	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19079	hp1	a0001	c0001	t0001	g0148	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19082	hp1	a0001	c0001	t0001	g0005	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19083	hp1	a0001	c0001	t0002	g0058	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19084	hp1	a0001	c0001	t0001	g0051	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19085	hp1	a0001	c0001	t0001	g0076	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19086	hp1	a0002	c0002	t0001	g0214	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19088	hp1	a0001	c0001	t0001	g0094	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19091	hp1	a0001	c0001	t0001	g0080	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19240	hp1	a0001	c0001	t0002	g0202	AFR	YRI	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA19240	hp2	a0001	c0001	t0002	g0171	AFR	YRI	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA20129	hp1	a0001	c0001	t0001	g0075	AFR	ASW	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA20129	hp2	a0001	c0001	t0001	g0133	AFR	ASW	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA20752	hp1	a0001	c0001	t0001	g0121	EUR	TSI	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA20805	hp1	a0001	c0001	t0001	g0014	EUR	TSI	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA20905	hp1	a0001	c0001	t0001	g0077	SAS	GIH	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01123	hp1	a0001	c0001	t0002	g0153	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG01123	hp2	a0001	c0001	t0001	g0012	AMR	CLM	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02109	hp1	a0001	c0001	t0002	g0170	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02109	hp2	a0001	c0001	t0005	g0194	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02486	hp1	a0001	c0001	t0002	g0140	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02559	hp1	a0001	c0001	t0002	g0178	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG02559	hp2	a0001	c0001	t0001	g0131	AFR	ACB	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG03471	hp1	a0001	c0001	t0003	g0019	AFR	MSL	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG06807	hp1	a0001	c0001	t0003	g0246	AFR	USA	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
HG06807	hp2	a0001	c0003	t0001	g0182	AFR	USA	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA18955	hp1	a0001	c0001	t0001	g0010	EAS	JPT	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA20300	hp1	a0001	c0001	t0001	g0060	AFR	USA	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA20300	hp2	a0001	c0001	t0002	g0181	AFR	USA	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA21309	hp1	a0001	c0001	t0001	g0120	AFR	LWK	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
NA21309	hp2	a0001	c0001	t0003	g0163	AFR	LWK	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0119	REF	REF	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0086	REF	REF	NLGN3_chrX_71139841_71176201	NLGN3	chrX	71139841	71176201

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:71155220	G G	A A	1	a0003 a0003	1	HG03041.hp1 HG03041.hp1	missense_variant	MODERATE	c.584G>A c.584G>A	p.Arg195Gln p.Arg195Gln	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/8	908/3975	584/2547	195/848		chrX	71155220
chrX:71164212	G G	A A	1	a0004 a0004	1	NA18941.hp1 NA18941.hp1	missense_variant	MODERATE	c.797G>A c.797G>A	p.Arg266His p.Arg266His	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/8	1121/3975	797/2547	266/848		chrX	71164212
chrX:71167098	TG TG	T T	1	a0008 a0008	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.1003delG c.1003delG	p.Ala335fs p.Ala335fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/8	1327/3975	1003/2547	335/848	INFO_REALIGN_3_PRIME	chrX	71167098
chrX:71167437	A A	AG AG	1	a0008 a0008	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.1342dupG c.1342dupG	p.Asp448fs p.Asp448fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/8	1667/3975	1343/2547	448/848	INFO_REALIGN_3_PRIME	chrX	71167437
chrX:71167459	CA CA	C C	1	a0008 a0008	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.1364delA c.1364delA	p.Lys455fs p.Lys455fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/8	1688/3975	1364/2547	455/848	INFO_REALIGN_3_PRIME	chrX	71167459
chrX:71167580	G G	GC GC	1	a0008 a0008	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.1486dupC c.1486dupC	p.Arg496fs p.Arg496fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/8	1811/3975	1487/2547	496/848	INFO_REALIGN_3_PRIME	chrX	71167580
chrX:71167594	G G	GCTCTA GCTCTA	1	a0008 a0008	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.1498_1499insTCTAC c.1498_1499insTCTAC	p.Pro500fs p.Pro500fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/8	1823/3975	1499/2547	500/848	INFO_REALIGN_3_PRIME	chrX	71167594
chrX:71169316	AG AG	A A	1	a0007 a0007	1	NA18994.hp1 NA18994.hp1	frameshift_variant	HIGH	c.1768delG c.1768delG	p.Glu590fs p.Glu590fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2092/3975	1768/2547	590/848	INFO_REALIGN_3_PRIME	chrX	71169316
chrX:71169516	T T	TC TC	1	a0008 a0008	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.1969dupC c.1969dupC	p.His657fs p.His657fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2294/3975	1970/2547	657/848	INFO_REALIGN_3_PRIME	chrX	71169516
chrX:71169882	G G	A A	1	a0006 a0006	1	HG03017.hp1 HG03017.hp1	missense_variant	MODERATE	c.2332G>A c.2332G>A	p.Gly778Ser p.Gly778Ser	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2656/3975	2332/2547	778/848		chrX	71169882
chrX:71169884	T T	TC TC	1	a0002 a0002	7	HG01433.hp1 HG02615.hp1 HG02738.hp1 others(4): Show HG01433.hp1 HG02615.hp1 HG02738.hp1 HG04184.hp1 NA18990.hp1 NA19030.hp2 NA19086.hp1	frameshift_variant	HIGH	c.2341dupC c.2341dupC	p.His781fs p.His781fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2666/3975	2342/2547	781/848	INFO_REALIGN_3_PRIME	chrX	71169884
chrX:71170003	TG TG	T T	1	a0005 a0005	1	HG03579.hp1 HG03579.hp1	frameshift_variant	HIGH	c.2455delG c.2455delG	p.Val819fs p.Val819fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2779/3975	2455/2547	819/848	INFO_REALIGN_3_PRIME	chrX	71170003
chrX:71170067	G G	GC GC	1	a0008 a0008	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.2521dupC c.2521dupC	p.His841fs p.His841fs	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2846/3975	2522/2547	841/848	INFO_REALIGN_3_PRIME	chrX	71170067

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:71155230	T T	C C	1	a0001c0005 a0001c0005	1	HG02683.hp1 HG02683.hp1	synonymous_variant	LOW	c.594T>C c.594T>C	p.Gly198Gly p.Gly198Gly	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/8	918/3975	594/2547	198/848	chrX	71155230
chrX:71167795	G G	A A	1	a0001c0008 a0001c0008	1	HG02523.hp1 HG02523.hp1	synonymous_variant	LOW	c.1698G>A c.1698G>A	p.Lys566Lys p.Lys566Lys	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/8	2022/3975	1698/2547	566/848	chrX	71167795
chrX:71169494	G G	A A	1	a0001c0010 a0001c0010	1	HG02723.hp1 HG02723.hp1	synonymous_variant	LOW	c.1944G>A c.1944G>A	p.Pro648Pro p.Pro648Pro	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2268/3975	1944/2547	648/848	chrX	71169494
chrX:71169800	C C	T T	1	a0001c0003 a0001c0003	4	HG02451.hp2 HG02615.hp2 HG02630.hp1 others(1): Show HG02451.hp2 HG02615.hp2 HG02630.hp1 HG06807.hp2	synonymous_variant	LOW	c.2250C>T c.2250C>T	p.Ala750Ala p.Ala750Ala	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	2574/3975	2250/2547	750/848	chrX	71169800

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:71147690	T T	C C	1	a0001c0001t0007 a0001c0001t0007	1	HG01106.hp1 HG01106.hp1	5_prime_UTR_variant	MODIFIER	c.-60T>C c.-60T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	2/8	60		chrX	71147690
chrX:71170132	C C	CCT CCT	1	a0008c0007t0008 a0008c0007t0008	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.35_36insCT c.35_36insCT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	36		chrX	71170132
chrX:71170133	T T	C C	1	a0008c0007t0008 a0008c0007t0008	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.36T>C c.36T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	36		chrX	71170133
chrX:71170157	G G	GCA GCA	6	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(3): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0010t0002 a0002c0002t0005 a0003c0004t0002	79	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(76): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp1 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA18999.hp2 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.80_81dupAC c.80_81dupAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	82	INFO_REALIGN_3_PRIME	chrX	71170157
chrX:71170157	G G	GCACA GCACA	1	a0001c0001t0003 a0001c0001t0003	11	HG01255.hp1 HG01884.hp1 HG01993.hp1 others(8): Show HG01255.hp1 HG01884.hp1 HG01993.hp1 HG02145.hp1 HG02622.hp1 HG02809.hp1 HG03041.hp2 HG03453.hp2 HG03471.hp1 HG06807.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.78_81dupACAC c.78_81dupACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	82	INFO_REALIGN_3_PRIME	chrX	71170157
chrX:71170182	G G	GAC GAC	1	a0001c0001t0009 a0001c0001t0009	1	HG04184.hp2 HG04184.hp2	3_prime_UTR_variant	MODIFIER	c.103_104dupCA c.103_104dupCA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	105	INFO_REALIGN_3_PRIME	chrX	71170182
chrX:71170314	CAAACCCT others(2): Show CAAACCCTTT	C C	1	a0001c0001t0013 a0001c0001t0013	1	NA19070.hp1 NA19070.hp1	3_prime_UTR_variant	MODIFIER	c.221_229delCCCTTT others(3): Show c.221_229delCCCTTTAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	221	INFO_REALIGN_3_PRIME	chrX	71170314
chrX:71170333	C C	T T	1	a0001c0001t0012 a0001c0001t0012	1	HG02071.hp1 HG02071.hp1	3_prime_UTR_variant	MODIFIER	c.236C>T c.236C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	236		chrX	71170333
chrX:71170500	TG TG	T T	1	a0008c0007t0008 a0008c0007t0008	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.406delG c.406delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	406	INFO_REALIGN_3_PRIME	chrX	71170500
chrX:71170575	TTC TTC	T T	1	a0008c0007t0008 a0008c0007t0008	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.480_481delCT c.480_481delCT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	480	INFO_REALIGN_3_PRIME	chrX	71170575
chrX:71170578	T T	C C	1	a0008c0007t0008 a0008c0007t0008	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.481T>C c.481T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	481		chrX	71170578
chrX:71170743	TG TG	T T	1	a0008c0007t0008 a0008c0007t0008	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.650delG c.650delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	650	INFO_REALIGN_3_PRIME	chrX	71170743
chrX:71171057	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG02165.hp1 HG02165.hp1	3_prime_UTR_variant	MODIFIER	c.960G>A c.960G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	960		chrX	71171057
chrX:71171075	TG TG	T T	1	a0008c0007t0008 a0008c0007t0008	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.980delG c.980delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	980	INFO_REALIGN_3_PRIME	chrX	71171075
chrX:71171077	G G	GT GT	3	a0001c0001t0005 a0001c0001t0006 a0002c0002t0005 a0001c0001t0005 a0001c0001t0006 a0002c0002t0005	8	HG01175.hp2 HG02109.hp2 HG02258.hp1 others(5): Show HG01175.hp2 HG02109.hp2 HG02258.hp1 HG02615.hp1 HG02886.hp2 NA18522.hp1 NA19000.hp1 NA19012.hp1	3_prime_UTR_variant	MODIFIER	c.995dupT c.995dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	996	INFO_REALIGN_3_PRIME	chrX	71171077
chrX:71171077	GT GT	G G	3	a0001c0001t0004 a0001c0001t0010 a0001c0001t0011 a0001c0001t0004 a0001c0001t0010 a0001c0001t0011	9	HG01496.hp1 HG02080.hp1 HG02165.hp1 others(6): Show HG01496.hp1 HG02080.hp1 HG02165.hp1 HG02165.hp2 HG03834.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.995delT c.995delT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	8/8	995	INFO_REALIGN_3_PRIME	chrX	71171077

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:71145054	C C	G G	67	a0001c0001t0001g0001 a0001c0001t0001g0191 a0001c0001t0001g0192 others(64): Show a0001c0001t0001g0001 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0011g0206 a0002c0002t0001g0210 a0002c0002t0001g0214 a0007c0009t0001g0213	75	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(72): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02056.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02622.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp1 HG03516.hp2 HG03540.hp2 HG03834.hp2 HG04115.hp1 HG04204.hp1 HG06807.hp1 NA18747.hp1 NA18945.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18984.hp1 NA18994.hp1 NA18998.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19076.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-201+90C>G c.-201+90C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145054
chrX:71145055	C C	A A	67	a0001c0001t0001g0001 a0001c0001t0001g0191 a0001c0001t0001g0192 others(64): Show a0001c0001t0001g0001 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0011g0206 a0002c0002t0001g0210 a0002c0002t0001g0214 a0007c0009t0001g0213	75	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(72): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02056.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02622.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp1 HG03516.hp2 HG03540.hp2 HG03834.hp2 HG04115.hp1 HG04204.hp1 HG06807.hp1 NA18747.hp1 NA18945.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18984.hp1 NA18994.hp1 NA18998.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19076.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-201+91C>A c.-201+91C>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145055
chrX:71145113	G G	C C	2	a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0004 a0001c0001t0001g0020	3	HG01069.hp1 HG01071.hp2 HG02074.hp1 HG01069.hp1 HG01071.hp2 HG02074.hp1	intron_variant	MODIFIER	c.-201+149G>C c.-201+149G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145113
chrX:71145136	C C	T T	160	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(157): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	175	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(172): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18984.hp1 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-201+172C>T c.-201+172C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145136
chrX:71145138	T T	C C	160	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(157): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	175	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(172): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18984.hp1 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-201+174T>C c.-201+174T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145138
chrX:71145257	CG CG	C C	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-201+296delG c.-201+296delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71145257
chrX:71145356	G G	GC GC	1	a0001c0001t0001g0105 a0001c0001t0001g0105	1	NA18974.hp1 NA18974.hp1	intron_variant	MODIFIER	c.-201+399dupC c.-201+399dupC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71145356
chrX:71145414	C C	T T	1	a0001c0001t0002g0252 a0001c0001t0002g0252	1	HG00735.hp2 HG00735.hp2	intron_variant	MODIFIER	c.-201+450C>T c.-201+450C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145414
chrX:71145436	C C	T T	44	a0001c0001t0001g0001 a0001c0001t0001g0218 a0001c0001t0001g0219 others(41): Show a0001c0001t0001g0001 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0002c0002t0001g0214 a0007c0009t0001g0213	52	HG00639.hp2 HG00673.hp1 HG01109.hp1 others(49): Show HG00639.hp2 HG00673.hp1 HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02080.hp1 HG02083.hp1 HG02145.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02809.hp1 HG02818.hp2 HG03041.hp2 HG03453.hp2 HG03471.hp1 HG03490.hp1 HG03540.hp2 HG04115.hp1 HG04204.hp1 HG06807.hp1 NA18747.hp1 NA18945.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18994.hp1 NA18998.hp1 NA19005.hp1 NA19007.hp1 NA19056.hp1 NA19076.hp1 NA19084.hp2 NA19086.hp1	intron_variant	MODIFIER	c.-201+472C>T c.-201+472C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145436
chrX:71145595	G G	A A	32	a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 others(29): Show a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0007g0118 a0001c0003t0001g0129 a0001c0005t0001g0117 a0005c0012t0001g0123	36	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(33): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp1 HG01192.hp1 HG02074.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp2 HG02683.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03209.hp1 HG03540.hp1 HG03579.hp1 HG03669.hp2 NA18522.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-201+631G>A c.-201+631G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145595
chrX:71145767	A A	G G	1	a0001c0001t0002g0190 a0001c0001t0002g0190	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.-201+803A>G c.-201+803A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71145767
chrX:71145914	G G	GC GC	1	a0001c0001t0002g0189 a0001c0001t0002g0189	1	HG03098.hp1 HG03098.hp1	intron_variant	MODIFIER	c.-201+958dupC c.-201+958dupC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71145914
chrX:71146101	G G	GC GC	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-201+1140dupC c.-201+1140dupC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146101
chrX:71146120	T T	TC TC	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	HG00323.hp2 HG00323.hp2	intron_variant	MODIFIER	c.-201+1156_-201+115 others(5): Show c.-201+1156_-201+1157insC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146120
chrX:71146124	T T	TC TC	2	a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0022 a0001c0001t0001g0023	2	HG00323.hp1 HG00323.hp2 HG00323.hp1 HG00323.hp2	intron_variant	MODIFIER	c.-201+1160_-201+116 others(5): Show c.-201+1160_-201+1161insC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146124
chrX:71146124	T T	TTC TTC	6	a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0104 others(3): Show a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0003g0099	6	HG01891.hp2 HG01993.hp1 HG02559.hp1 others(3): Show HG01891.hp2 HG01993.hp1 HG02559.hp1 HG03654.hp1 NA19060.hp1 NA19067.hp1	intron_variant	MODIFIER	c.-201+1189_-201+119 others(6): Show c.-201+1189_-201+1190dupTC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146124
chrX:71146124	T T	TTCTC TTCTC	4	a0001c0001t0001g0103 a0001c0001t0002g0183 a0001c0001t0002g0184 others(1): Show a0001c0001t0001g0103 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185	4	HG00609.hp1 HG02895.hp1 HG02897.hp1 others(1): Show HG00609.hp1 HG02895.hp1 HG02897.hp1 HG03139.hp1	intron_variant	MODIFIER	c.-201+1187_-201+119 others(8): Show c.-201+1187_-201+1190dupTCTC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146124
chrX:71146124	TTC TTC	T T	5	a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0138 others(2): Show a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0138 a0001c0001t0001g0191 a0001c0001t0006g0028	5	HG01175.hp2 HG01261.hp1 HG03130.hp1 others(2): Show HG01175.hp2 HG01261.hp1 HG03130.hp1 HG04228.hp1 NA18943.hp1	intron_variant	MODIFIER	c.-201+1189_-201+119 others(6): Show c.-201+1189_-201+1190delTC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146124
chrX:71146124	TTCTC TTCTC	T T	2	a0001c0001t0001g0133 a0001c0001t0001g0192 a0001c0001t0001g0133 a0001c0001t0001g0192	2	HG02622.hp2 NA20129.hp2 HG02622.hp2 NA20129.hp2	intron_variant	MODIFIER	c.-201+1187_-201+119 others(8): Show c.-201+1187_-201+1190delTCTC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146124
chrX:71146124	TTCTCTC TTCTCTC	T T	2	a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0015 a0001c0001t0001g0020	3	HG01167.hp1 HG01169.hp2 HG02074.hp1 HG01167.hp1 HG01169.hp2 HG02074.hp1	intron_variant	MODIFIER	c.-201+1185_-201+119 others(10): Show c.-201+1185_-201+1190delTCTCTC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146124
chrX:71146124	TTCTCTCT others(1): Show TTCTCTCTC	T T	1	a0001c0001t0001g0114 a0001c0001t0001g0114	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.-201+1183_-201+119 others(12): Show c.-201+1183_-201+1190delTCTCTCTC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146124
chrX:71146145	TCTCTCTC others(3): Show TCTCTCTCTCA	T T	2	a0001c0001t0001g0004 a0001c0001t0001g0106 a0001c0001t0001g0004 a0001c0001t0001g0106	3	HG01069.hp1 HG01071.hp2 HG01168.hp1 HG01069.hp1 HG01071.hp2 HG01168.hp1	intron_variant	MODIFIER	c.-201+1183_-201+119 others(14): Show c.-201+1183_-201+1192delTCTCTCTCAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146145
chrX:71146145	TCTCTCTC others(5): Show TCTCTCTCTCACA	T T	24	a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 others(21): Show a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0007g0118 a0001c0005t0001g0117 a0005c0012t0001g0123	27	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(24): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01175.hp1 HG02258.hp1 HG02572.hp1 HG02630.hp2 HG02683.hp1 HG02896.hp1 HG02897.hp2 HG03209.hp1 HG03540.hp1 HG03579.hp1 HG03669.hp2 NA18522.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-201+1183_-201+119 others(16): Show c.-201+1183_-201+1194delTCTCTCTCACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146145
chrX:71146145	TCTCTCTC others(9): Show TCTCTCTCTCACACACA	T T	1	a0001c0003t0001g0129 a0001c0003t0001g0129	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.-201+1183_-201+119 others(20): Show c.-201+1183_-201+1198delTCTCTCTCACACACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146145
chrX:71146145	TCTCTCTC others(11): Show TCTCTCTCTCACACACACA	T T	2	a0001c0001t0001g0131 a0001c0001t0002g0130 a0001c0001t0001g0131 a0001c0001t0002g0130	2	HG02280.hp2 HG02559.hp2 HG02280.hp2 HG02559.hp2	intron_variant	MODIFIER	c.-201+1183_-201+120 others(22): Show c.-201+1183_-201+1200delTCTCTCTCACACACACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146145
chrX:71146147	TCTCTCTC others(5): Show TCTCTCTCACACA	T T	1	a0001c0001t0005g0132 a0001c0001t0005g0132	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.-201+1185_-201+119 others(16): Show c.-201+1185_-201+1196delTCTCTCACACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146147
chrX:71146149	TCTCTCA TCTCTCA	T T	2	a0001c0001t0001g0193 a0006c0011t0001g0134 a0001c0001t0001g0193 a0006c0011t0001g0134	2	HG03017.hp1 NA19030.hp1 HG03017.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-201+1187_-201+119 others(10): Show c.-201+1187_-201+1192delTCTCAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146149
chrX:71146149	TCTCTCAC others(1): Show TCTCTCACA	T T	2	a0001c0001t0002g0135 a0001c0003t0001g0136 a0001c0001t0002g0135 a0001c0003t0001g0136	2	HG02630.hp1 HG02723.hp2 HG02630.hp1 HG02723.hp2	intron_variant	MODIFIER	c.-201+1187_-201+119 others(12): Show c.-201+1187_-201+1194delTCTCACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146149
chrX:71146149	TCTCTCAC others(3): Show TCTCTCACACA	T T	2	a0001c0001t0002g0190 a0001c0003t0001g0137 a0001c0001t0002g0190 a0001c0003t0001g0137	2	HG02615.hp2 NA18906.hp2 HG02615.hp2 NA18906.hp2	intron_variant	MODIFIER	c.-201+1187_-201+119 others(14): Show c.-201+1187_-201+1196delTCTCACACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146149
chrX:71146151	T T	A A	4	a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 others(1): Show a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027	4	HG00735.hp1 HG01074.hp1 HG01361.hp1 others(1): Show HG00735.hp1 HG01074.hp1 HG01361.hp1 HG03669.hp1	intron_variant	MODIFIER	c.-201+1187T>A c.-201+1187T>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146151
chrX:71146151	TCTCACAC others(1): Show TCTCACACA	T T	1	a0001c0001t0001g0139 a0001c0001t0001g0139	1	NA18999.hp1 NA18999.hp1	intron_variant	MODIFIER	c.-201+1189_-201+119 others(12): Show c.-201+1189_-201+1196delTCACACAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146151
chrX:71146153	T T	A A	15	a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 others(12): Show a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0191 a0001c0001t0005g0194 a0001c0001t0006g0028 a0001c0001t0006g0195	15	HG00735.hp1 HG01074.hp1 HG01175.hp2 others(12): Show HG00735.hp1 HG01074.hp1 HG01175.hp2 HG01261.hp1 HG01361.hp1 HG02027.hp1 HG02040.hp1 HG02074.hp1 HG02109.hp2 HG03130.hp1 HG03669.hp1 HG03704.hp1 NA18943.hp1 NA18948.hp1 NA19012.hp1	intron_variant	MODIFIER	c.-201+1189T>A c.-201+1189T>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146153
chrX:71146153	T T	TCTCA TCTCA	2	a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0176 a0001c0001t0001g0179	2	HG02055.hp1 HG03704.hp2 HG02055.hp1 HG03704.hp2	intron_variant	MODIFIER	c.-201+1190_-201+119 others(8): Show c.-201+1190_-201+1191insTCAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146153
chrX:71146153	T T	TCTCTCA TCTCTCA	5	a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0002g0180 others(2): Show a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0003t0001g0182	5	HG02280.hp1 HG03486.hp1 HG03486.hp2 others(2): Show HG02280.hp1 HG03486.hp1 HG03486.hp2 HG06807.hp2 NA20300.hp2	intron_variant	MODIFIER	c.-201+1190_-201+119 others(10): Show c.-201+1190_-201+1191insTCTCAC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146153
chrX:71146155	A A	T T	21	a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0207 others(18): Show a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0002g0186 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0004g0251 a0001c0001t0011g0206 a0002c0002t0001g0210	21	HG00735.hp2 HG00738.hp1 HG01081.hp1 others(18): Show HG00735.hp2 HG00738.hp1 HG01081.hp1 HG01358.hp1 HG01496.hp1 HG01891.hp1 HG02056.hp1 HG02451.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03453.hp1 HG03516.hp2 HG03654.hp1 HG03834.hp2 NA18984.hp1 NA18999.hp2 NA19030.hp2 NA19240.hp1	intron_variant	MODIFIER	c.-201+1191A>T c.-201+1191A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146155
chrX:71146156	CACACACA others(9): Show CACACACACACACACAG	C C	7	a0001c0001t0001g0250 a0001c0001t0003g0019 a0001c0001t0003g0245 others(4): Show a0001c0001t0001g0250 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249	8	HG01884.hp1 HG02145.hp1 HG02809.hp1 others(5): Show HG01884.hp1 HG02145.hp1 HG02809.hp1 HG02818.hp2 HG03041.hp2 HG03453.hp2 HG03471.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-201+1208_-201+122 others(20): Show c.-201+1208_-201+1223delGACACACACACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146156
chrX:71146157	A A	T T	6	a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 others(3): Show a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0002g0186 a0002c0002t0001g0210	6	HG00738.hp1 HG01891.hp1 HG02056.hp1 others(3): Show HG00738.hp1 HG01891.hp1 HG02056.hp1 HG02809.hp2 HG02976.hp1 NA19030.hp2	intron_variant	MODIFIER	c.-201+1193A>T c.-201+1193A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146157
chrX:71146159	A A	T T	1	a0001c0001t0001g0212 a0001c0001t0001g0212	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.-201+1195A>T c.-201+1195A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146159
chrX:71146160	CACACACA others(5): Show CACACACACACAG	C C	3	a0001c0001t0001g0208 a0001c0001t0001g0211 a0002c0002t0001g0210 a0001c0001t0001g0208 a0001c0001t0001g0211 a0002c0002t0001g0210	3	HG01891.hp1 HG02976.hp1 NA19030.hp2 HG01891.hp1 HG02976.hp1 NA19030.hp2	intron_variant	MODIFIER	c.-201+1208_-201+121 others(16): Show c.-201+1208_-201+1219delGACACACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146160
chrX:71146161	A A	T T	1	a0001c0001t0001g0212 a0001c0001t0001g0212	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.-201+1197A>T c.-201+1197A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146161
chrX:71146162	CACACACA others(3): Show CACACACACAG	C C	1	a0001c0001t0002g0244 a0001c0001t0002g0244	1	NA19056.hp1 NA19056.hp1	intron_variant	MODIFIER	c.-201+1208_-201+121 others(14): Show c.-201+1208_-201+1217delGACACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146162
chrX:71146163	A A	T T	1	a0001c0001t0001g0212 a0001c0001t0001g0212	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.-201+1199A>T c.-201+1199A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146163
chrX:71146164	C C	CACACAG CACACAG	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG02040.hp1 HG02040.hp1	intron_variant	MODIFIER	c.-201+1205_-201+120 others(10): Show c.-201+1205_-201+1206insGACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146164
chrX:71146164	C C	CACAG CACAG	2	a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0024 a0001c0001t0001g0025	2	HG00735.hp1 HG03669.hp1 HG00735.hp1 HG03669.hp1	intron_variant	MODIFIER	c.-201+1203_-201+120 others(8): Show c.-201+1203_-201+1204insGACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146164
chrX:71146164	CACACACA others(1): Show CACACACAG	C C	14	a0001c0001t0001g0161 a0001c0001t0001g0167 a0001c0001t0001g0240 others(11): Show a0001c0001t0001g0161 a0001c0001t0001g0167 a0001c0001t0001g0240 a0001c0001t0002g0003 a0001c0001t0002g0162 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242	17	HG00639.hp2 HG01168.hp2 HG01169.hp1 others(14): Show HG00639.hp2 HG01168.hp2 HG01169.hp1 HG01361.hp2 HG01943.hp1 HG01993.hp2 HG02080.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02818.hp1 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19058.hp1 NA19076.hp1	intron_variant	MODIFIER	c.-201+1208_-201+121 others(12): Show c.-201+1208_-201+1215delGACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146164
chrX:71146166	C C	CAG CAG	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	HG01361.hp1 HG01361.hp1	intron_variant	MODIFIER	c.-201+1203_-201+120 others(6): Show c.-201+1203_-201+1204insGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146166
chrX:71146166	CACACAG CACACAG	C C	21	a0001c0001t0001g0017 a0001c0001t0001g0159 a0001c0001t0001g0160 others(18): Show a0001c0001t0001g0017 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0165 a0001c0001t0001g0212 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0003g0166 a0001c0001t0004g0251 a0001c0001t0011g0206	22	HG00673.hp1 HG00738.hp1 HG01109.hp1 others(19): Show HG00673.hp1 HG00738.hp1 HG01109.hp1 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG02257.hp2 HG02300.hp1 HG02622.hp1 HG02965.hp1 HG03490.hp1 HG03540.hp2 HG03710.hp1 HG03834.hp2 HG04204.hp1 NA18965.hp1 NA19005.hp1 NA19066.hp1	intron_variant	MODIFIER	c.-201+1208_-201+121 others(10): Show c.-201+1208_-201+1213delGACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146166
chrX:71146168	C C	CACACACA others(1): Show CACACACAG	1	a0001c0001t0002g0140 a0001c0001t0002g0140	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.-201+1207_-201+120 others(12): Show c.-201+1207_-201+1208insCACAGACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146168
chrX:71146168	C C	CACACAG CACACAG	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	HG02129.hp1 HG02129.hp1	intron_variant	MODIFIER	c.-201+1207_-201+120 others(10): Show c.-201+1207_-201+1208insCAGACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146168
chrX:71146168	C C	G G	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG01074.hp1 HG01074.hp1	intron_variant	MODIFIER	c.-201+1204C>G c.-201+1204C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146168
chrX:71146168	CACAG CACAG	C C	33	a0001c0001t0001g0001 a0001c0001t0001g0148 a0001c0001t0001g0149 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0164 a0001c0001t0001g0196 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0002g0016 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0252 a0001c0001t0010g0147 a0001c0010t0002g0157 a0002c0002t0001g0214 a0003c0004t0002g0155	38	HG00735.hp2 HG00741.hp1 HG01081.hp1 others(35): Show HG00735.hp2 HG00741.hp1 HG01081.hp1 HG01123.hp1 HG01256.hp1 HG01934.hp1 HG02015.hp1 HG02083.hp1 HG02165.hp1 HG02257.hp1 HG02451.hp1 HG02647.hp1 HG02723.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG03041.hp1 HG03195.hp2 HG03453.hp1 HG03516.hp1 HG03516.hp2 HG04115.hp1 NA18747.hp1 NA18906.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18954.hp1 NA18964.hp1 NA18998.hp1 NA18999.hp2 NA19007.hp1 NA19043.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-201+1208_-201+121 others(8): Show c.-201+1208_-201+1211delGACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146168
chrX:71146170	C C	G G	4	a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 others(1): Show a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0006g0028	4	HG01175.hp2 HG01261.hp1 HG03704.hp1 others(1): Show HG01175.hp2 HG01261.hp1 HG03704.hp1 NA18943.hp1	intron_variant	MODIFIER	c.-201+1206C>G c.-201+1206C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146170
chrX:71146170	CAG CAG	C C	9	a0001c0001t0001g0102 a0001c0001t0001g0145 a0001c0001t0001g0207 others(6): Show a0001c0001t0001g0102 a0001c0001t0001g0145 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0003g0163 a0002c0002t0005g0146 a0007c0009t0001g0213	9	HG01358.hp1 HG02056.hp1 HG02523.hp2 others(6): Show HG01358.hp1 HG02056.hp1 HG02523.hp2 HG02615.hp1 HG02886.hp1 HG02970.hp1 NA18984.hp1 NA18994.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-201+1208_-201+120 others(6): Show c.-201+1208_-201+1209delGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146170
chrX:71146172	G G	C C	68	a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 others(65): Show a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0176 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0006g0028 a0001c0001t0007g0118 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0005c0012t0001g0123 a0006c0011t0001g0134	72	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(69): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01261.hp1 HG01361.hp1 HG01891.hp2 HG02040.hp1 HG02074.hp1 HG02129.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG03017.hp1 HG03139.hp1 HG03209.hp1 HG03486.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA18943.hp1 NA18999.hp1 NA19030.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-201+1208G>C c.-201+1208G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146172
chrX:71146172	G G	GAC GAC	15	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0032 others(12): Show a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0006g0011 a0001c0001t0013g0079	16	HG00741.hp2 HG02027.hp1 HG02132.hp1 others(13): Show HG00741.hp2 HG02027.hp1 HG02132.hp1 HG03831.hp1 HG04199.hp1 NA18940.hp1 NA18952.hp1 NA18955.hp1 NA18959.hp1 NA18967.hp1 NA19000.hp1 NA19070.hp1 NA19085.hp1 NA19091.hp1 NA20129.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-201+1256_-201+125 others(6): Show c.-201+1256_-201+1257dupCA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	G G	GACAC GACAC	19	a0001c0001t0001g0009 a0001c0001t0001g0023 a0001c0001t0001g0059 others(16): Show a0001c0001t0001g0009 a0001c0001t0001g0023 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0188 a0004c0006t0001g0009	19	HG00323.hp1 HG00621.hp1 HG00639.hp1 others(16): Show HG00323.hp1 HG00621.hp1 HG00639.hp1 HG02080.hp2 HG03239.hp1 HG03486.hp1 NA18941.hp1 NA18962.hp1 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp1 NA18983.hp1 NA19009.hp1 NA19060.hp1 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-201+1254_-201+125 others(8): Show c.-201+1254_-201+1257dupCACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	G G	GACACAC GACACAC	20	a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0008 others(17): Show a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0022 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0002g0058 a0001c0001t0012g0007 a0002c0002t0001g0008 a0008c0007t0008g0052	23	HG00323.hp2 HG01433.hp1 HG01515.hp1 others(20): Show HG00323.hp2 HG01433.hp1 HG01515.hp1 HG01928.hp1 HG01975.hp1 HG02055.hp1 HG02071.hp1 HG02135.hp1 HG02280.hp1 HG02735.hp1 HG03195.hp1 HG03688.hp1 NA18944.hp1 NA18951.hp1 NA18960.hp1 NA18979.hp2 NA18991.hp1 NA18991.hp2 NA18998.hp2 NA19006.hp1 NA19010.hp2 NA19083.hp1 NA19084.hp1	intron_variant	MODIFIER	c.-201+1252_-201+125 others(10): Show c.-201+1252_-201+1257dupCACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	G G	GACACACA others(1): Show GACACACAC	10	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0031 others(7): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0031 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0100 a0001c0008t0001g0043	12	HG00733.hp1 HG01257.hp1 HG01346.hp2 others(9): Show HG00733.hp1 HG01257.hp1 HG01346.hp2 HG02293.hp1 HG02523.hp1 NA18612.hp1 NA18948.hp1 NA18954.hp2 NA19004.hp1 NA19067.hp1 NA19068.hp1 NA19082.hp1	intron_variant	MODIFIER	c.-201+1250_-201+125 others(12): Show c.-201+1250_-201+1257dupCACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	G G	GACACACA others(3): Show GACACACACAC	4	a0001c0001t0001g0021 a0001c0001t0001g0038 a0001c0001t0001g0039 others(1): Show a0001c0001t0001g0021 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040	4	HG01496.hp2 HG02683.hp2 NA18966.hp1 others(1): Show HG01496.hp2 HG02683.hp2 NA18966.hp1 NA19062.hp1	intron_variant	MODIFIER	c.-201+1248_-201+125 others(14): Show c.-201+1248_-201+1257dupCACACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	G G	GACACACA others(5): Show GACACACACACAC	3	a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0003g0099 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0003g0099	3	HG01993.hp1 NA18964.hp2 NA18995.hp1 HG01993.hp1 NA18964.hp2 NA18995.hp1	intron_variant	MODIFIER	c.-201+1246_-201+125 others(16): Show c.-201+1246_-201+1257dupCACACACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	G G	GACACACA others(9): Show GACACACACACACACAC	1	a0001c0001t0001g0103 a0001c0001t0001g0103	1	HG00609.hp1 HG00609.hp1	intron_variant	MODIFIER	c.-201+1242_-201+125 others(20): Show c.-201+1242_-201+1257dupCACACACACACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	GAC GAC	G G	5	a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0002g0168 others(2): Show a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0002g0168 a0001c0001t0009g0095 a0002c0002t0001g0092	5	HG00280.hp1 HG03225.hp1 HG04184.hp1 others(2): Show HG00280.hp1 HG03225.hp1 HG04184.hp1 HG04184.hp2 NA19088.hp1	intron_variant	MODIFIER	c.-201+1256_-201+125 others(6): Show c.-201+1256_-201+1257delCA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	GACAC GACAC	G G	8	a0001c0001t0001g0096 a0001c0001t0002g0170 a0001c0001t0002g0171 others(5): Show a0001c0001t0001g0096 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0189 a0001c0001t0003g0169	8	HG01243.hp1 HG01255.hp1 HG02109.hp1 others(5): Show HG01243.hp1 HG01255.hp1 HG02109.hp1 HG02717.hp1 HG02976.hp2 HG03098.hp1 NA19010.hp1 NA19240.hp2	intron_variant	MODIFIER	c.-201+1254_-201+125 others(8): Show c.-201+1254_-201+1257delCACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	GACACAC GACACAC	G G	1	a0001c0001t0001g0097 a0001c0001t0001g0097	1	NA18941.hp2 NA18941.hp2	intron_variant	MODIFIER	c.-201+1252_-201+125 others(10): Show c.-201+1252_-201+1257delCACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	GACACACA others(1): Show GACACACAC	G G	3	a0001c0001t0001g0098 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0001g0098 a0001c0001t0005g0194 a0001c0001t0006g0195	3	HG01978.hp2 HG02109.hp2 NA19012.hp1 HG01978.hp2 HG02109.hp2 NA19012.hp1	intron_variant	MODIFIER	c.-201+1250_-201+125 others(12): Show c.-201+1250_-201+1257delCACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146172	GACACACA others(3): Show GACACACACAC	G G	1	a0001c0001t0002g0175 a0001c0001t0002g0175	1	HG03239.hp2 HG03239.hp2	intron_variant	MODIFIER	c.-201+1248_-201+125 others(14): Show c.-201+1248_-201+1257delCACACACACA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146172
chrX:71146174	C C	G G	6	a0001c0001t0001g0104 a0001c0001t0001g0176 a0001c0001t0001g0192 others(3): Show a0001c0001t0001g0104 a0001c0001t0001g0176 a0001c0001t0001g0192 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0003t0001g0182	6	HG02622.hp2 HG03486.hp2 HG03654.hp1 others(3): Show HG02622.hp2 HG03486.hp2 HG03654.hp1 HG03704.hp2 HG06807.hp2 NA20300.hp2	intron_variant	MODIFIER	c.-201+1210C>G c.-201+1210C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146174
chrX:71146176	C C	G G	15	a0001c0001t0001g0102 a0001c0001t0001g0138 a0001c0001t0001g0141 others(12): Show a0001c0001t0001g0102 a0001c0001t0001g0138 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0193 a0001c0001t0001g0207 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0003g0163 a0007c0009t0001g0213	15	HG01358.hp1 HG01891.hp2 HG02559.hp1 others(12): Show HG01358.hp1 HG01891.hp2 HG02559.hp1 HG02698.hp1 HG02895.hp1 HG02897.hp1 HG03139.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04228.hp1 NA18984.hp1 NA18994.hp1 NA19030.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-201+1212C>G c.-201+1212C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146176
chrX:71146178	C C	G G	19	a0001c0001t0001g0001 a0001c0001t0001g0133 a0001c0001t0001g0145 others(16): Show a0001c0001t0001g0001 a0001c0001t0001g0133 a0001c0001t0001g0145 a0001c0001t0001g0164 a0001c0001t0001g0196 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0003t0001g0136 a0002c0002t0001g0214 a0002c0002t0005g0146 a0006c0011t0001g0134	23	HG00741.hp1 HG01256.hp1 HG01934.hp1 others(20): Show HG00741.hp1 HG01256.hp1 HG01934.hp1 HG02015.hp1 HG02083.hp1 HG02523.hp2 HG02615.hp1 HG02630.hp1 HG02886.hp1 HG02970.hp1 HG03017.hp1 HG03195.hp2 HG04115.hp1 NA18747.hp1 NA18947.hp2 NA18951.hp2 NA18954.hp1 NA18964.hp1 NA18998.hp1 NA19007.hp1 NA19084.hp2 NA19086.hp1 NA20129.hp2	intron_variant	MODIFIER	c.-201+1214C>G c.-201+1214C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146178
chrX:71146180	C C	G G	42	a0001c0001t0001g0017 a0001c0001t0001g0148 a0001c0001t0001g0149 others(39): Show a0001c0001t0001g0017 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0165 a0001c0001t0001g0209 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0002g0016 a0001c0001t0002g0135 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0252 a0001c0001t0003g0166 a0001c0001t0010g0147 a0001c0003t0001g0137 a0001c0010t0002g0157 a0003c0004t0002g0155	44	HG00673.hp1 HG00735.hp2 HG01081.hp1 others(41): Show HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01257.hp2 HG01258.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG02056.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02300.hp1 HG02451.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03041.hp1 HG03453.hp1 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03710.hp1 HG04204.hp1 NA18906.hp1 NA18906.hp2 NA18947.hp1 NA18965.hp1 NA18999.hp2 NA19005.hp1 NA19043.hp1 NA19079.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-201+1216C>G c.-201+1216C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146180
chrX:71146182	C C	G G	18	a0001c0001t0001g0114 a0001c0001t0001g0139 a0001c0001t0001g0159 others(15): Show a0001c0001t0001g0114 a0001c0001t0001g0139 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0167 a0001c0001t0001g0240 a0001c0001t0002g0003 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0011g0206	21	HG00639.hp2 HG01168.hp2 HG01169.hp1 others(18): Show HG00639.hp2 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01496.hp1 HG01884.hp2 HG01943.hp1 HG01993.hp2 HG02080.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02818.hp1 HG03834.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA18999.hp1 NA19066.hp1 NA19076.hp1	intron_variant	MODIFIER	c.-201+1218C>G c.-201+1218C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146182
chrX:71146184	C C	G G	4	a0001c0001t0001g0020 a0001c0001t0001g0161 a0001c0001t0002g0162 others(1): Show a0001c0001t0001g0020 a0001c0001t0001g0161 a0001c0001t0002g0162 a0001c0001t0002g0244	4	HG01361.hp2 HG02074.hp1 NA19056.hp1 others(1): Show HG01361.hp2 HG02074.hp1 NA19056.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-201+1220C>G c.-201+1220C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146184
chrX:71146186	C C	G G	22	a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 others(19): Show a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0106 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0002g0122 a0001c0001t0007g0118 a0001c0005t0001g0117 a0002c0002t0001g0210 a0005c0012t0001g0123	26	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(23): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp1 HG01891.hp1 HG02630.hp2 HG02683.hp1 HG03579.hp1 HG03669.hp2 NA19030.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-201+1222C>G c.-201+1222C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146186
chrX:71146188	C C	G G	8	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(5): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0002g0107 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132	8	HG02258.hp1 HG02572.hp1 HG02886.hp2 others(5): Show HG02258.hp1 HG02572.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03209.hp1 HG03540.hp1 NA18522.hp1	intron_variant	MODIFIER	c.-201+1224C>G c.-201+1224C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146188
chrX:71146190	C C	G G	8	a0001c0001t0001g0250 a0001c0001t0003g0019 a0001c0001t0003g0245 others(5): Show a0001c0001t0001g0250 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0003t0001g0129	9	HG01884.hp1 HG02145.hp1 HG02451.hp2 others(6): Show HG01884.hp1 HG02145.hp1 HG02451.hp2 HG02809.hp1 HG02818.hp2 HG03041.hp2 HG03453.hp2 HG03471.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-201+1226C>G c.-201+1226C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146190
chrX:71146192	C C	G G	3	a0001c0001t0001g0131 a0001c0001t0001g0208 a0001c0001t0002g0130 a0001c0001t0001g0131 a0001c0001t0001g0208 a0001c0001t0002g0130	3	HG02280.hp2 HG02559.hp2 HG02976.hp1 HG02280.hp2 HG02559.hp2 HG02976.hp1	intron_variant	MODIFIER	c.-201+1228C>G c.-201+1228C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146192
chrX:71146364	GGTGTGCG others(3): Show GGTGTGCGTGT	G G	2	a0001c0001t0002g0107 a0001c0001t0005g0132 a0001c0001t0002g0107 a0001c0001t0005g0132	2	HG02886.hp2 HG03540.hp1 HG02886.hp2 HG03540.hp1	intron_variant	MODIFIER	c.-200-1168_-200-115 others(14): Show c.-200-1168_-200-1159delTGTGTGTGCG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	71146364
chrX:71146838	G G	A A	1	a0001c0001t0001g0209 a0001c0001t0001g0209	1	HG02056.hp1 HG02056.hp1	intron_variant	MODIFIER	c.-200-712G>A c.-200-712G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71146838
chrX:71147090	G G	T T	3	a0001c0001t0001g0131 a0001c0001t0002g0130 a0001c0003t0001g0129 a0001c0001t0001g0131 a0001c0001t0002g0130 a0001c0003t0001g0129	3	HG02280.hp2 HG02451.hp2 HG02559.hp2 HG02280.hp2 HG02451.hp2 HG02559.hp2	intron_variant	MODIFIER	c.-200-460G>T c.-200-460G>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71147090
chrX:71147196	A A	G G	153	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(150): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0082 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0009g0095 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	167	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(164): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18984.hp1 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-200-354A>G c.-200-354A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71147196
chrX:71147478	A A	G G	150	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(147): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0082 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0009g0095 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	164	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(161): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18984.hp1 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-200-72A>G c.-200-72A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	1/7		chrX	71147478
chrX:71148359	C C	T T	1	a0001c0001t0002g0235 a0001c0001t0002g0235	1	HG01978.hp1 HG01978.hp1	intron_variant	MODIFIER	c.457+153C>T c.457+153C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	2/7		chrX	71148359
chrX:71148758	G G	A A	1	a0001c0001t0001g0212 a0001c0001t0001g0212	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.458-88G>A c.458-88G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	2/7		chrX	71148758
chrX:71148775	T T	TG TG	7	a0001c0001t0001g0010 a0001c0001t0001g0047 a0001c0001t0001g0048 others(4): Show a0001c0001t0001g0010 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0059 a0001c0001t0001g0072 a0001c0001t0001g0083 a0001c0001t0001g0101	8	NA18940.hp1 NA18955.hp1 NA18967.hp1 others(5): Show NA18940.hp1 NA18955.hp1 NA18967.hp1 NA18989.hp1 NA18991.hp1 NA18991.hp2 NA19060.hp1 NA19065.hp2	intron_variant	MODIFIER	c.458-65dupG c.458-65dupG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	2/7	INFO_REALIGN_3_PRIME	chrX	71148775
chrX:71149280	G G	A A	9	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(6): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0196 a0001c0001t0002g0107 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132	9	HG02258.hp1 HG02572.hp1 HG02886.hp2 others(6): Show HG02258.hp1 HG02572.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03195.hp2 HG03209.hp1 HG03540.hp1 NA18522.hp1	intron_variant	MODIFIER	c.517+375G>A c.517+375G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71149280
chrX:71149688	G G	A A	13	a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 others(10): Show a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0165 a0001c0001t0001g0176 a0001c0001t0010g0147 a0002c0002t0001g0214 a0006c0011t0001g0134	13	HG02165.hp1 HG02523.hp2 HG03017.hp1 others(10): Show HG02165.hp1 HG02523.hp2 HG03017.hp1 HG03704.hp2 HG03710.hp1 HG03942.hp1 HG04228.hp1 NA18947.hp1 NA18999.hp1 NA19058.hp1 NA19066.hp1 NA19079.hp1 NA19086.hp1	intron_variant	MODIFIER	c.517+783G>A c.517+783G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71149688
chrX:71150117	G G	A A	2	a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0187 a0001c0001t0001g0188	2	HG02280.hp1 HG03486.hp1 HG02280.hp1 HG03486.hp1	intron_variant	MODIFIER	c.517+1212G>A c.517+1212G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150117
chrX:71150394	G G	A A	152	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(149): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0047 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	166	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(163): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18984.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.517+1489G>A c.517+1489G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150394
chrX:71150439	C C	T T	2	a0001c0001t0001g0071 a0001c0001t0001g0081 a0001c0001t0001g0071 a0001c0001t0001g0081	2	HG00639.hp1 HG00741.hp2 HG00639.hp1 HG00741.hp2	intron_variant	MODIFIER	c.517+1534C>T c.517+1534C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150439
chrX:71150484	G G	A A	3	a0001c0001t0001g0160 a0001c0001t0001g0167 a0001c0001t0001g0179 a0001c0001t0001g0160 a0001c0001t0001g0167 a0001c0001t0001g0179	3	HG01884.hp2 HG02055.hp1 HG02818.hp1 HG01884.hp2 HG02055.hp1 HG02818.hp1	intron_variant	MODIFIER	c.517+1579G>A c.517+1579G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150484
chrX:71150486	G G	A A	1	a0001c0001t0001g0211 a0001c0001t0001g0211	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.517+1581G>A c.517+1581G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150486
chrX:71150561	G G	C C	45	a0001c0001t0001g0017 a0001c0001t0001g0047 a0001c0001t0001g0138 others(42): Show a0001c0001t0001g0017 a0001c0001t0001g0047 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0176 a0001c0001t0002g0016 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0010g0147 a0001c0003t0001g0182 a0001c0010t0002g0157 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0006c0011t0001g0134	47	HG00741.hp1 HG01123.hp1 HG01361.hp2 others(44): Show HG00741.hp1 HG01123.hp1 HG01361.hp2 HG01891.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02615.hp1 HG02622.hp1 HG02647.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03139.hp1 HG03239.hp2 HG03486.hp2 HG03516.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04228.hp1 HG06807.hp2 NA18906.hp1 NA18947.hp1 NA18991.hp2 NA18999.hp1 NA19043.hp1 NA19058.hp1 NA19066.hp1 NA19079.hp1 NA19086.hp1 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.517+1656G>C c.517+1656G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150561
chrX:71150701	C C	CA CA	3	a0001c0001t0001g0049 a0001c0001t0001g0207 a0001c0001t0002g0197 a0001c0001t0001g0049 a0001c0001t0001g0207 a0001c0001t0002g0197	3	HG01515.hp1 HG02886.hp1 NA18984.hp1 HG01515.hp1 HG02886.hp1 NA18984.hp1	intron_variant	MODIFIER	c.517+1817dupA c.517+1817dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	71150701
chrX:71150701	CA CA	C C	12	a0001c0001t0001g0069 a0001c0001t0001g0078 a0001c0001t0001g0106 others(9): Show a0001c0001t0001g0069 a0001c0001t0001g0078 a0001c0001t0001g0106 a0001c0001t0001g0113 a0001c0001t0001g0128 a0001c0001t0001g0133 a0001c0001t0001g0212 a0001c0001t0002g0144 a0001c0001t0002g0235 a0001c0001t0002g0243 a0001c0001t0004g0242 a0002c0002t0001g0210	12	HG00099.hp1 HG00738.hp1 HG01168.hp1 others(9): Show HG00099.hp1 HG00738.hp1 HG01168.hp1 HG01169.hp1 HG01978.hp1 HG02897.hp2 HG03834.hp1 NA18959.hp1 NA18977.hp1 NA19030.hp2 NA19076.hp1 NA20129.hp2	intron_variant	MODIFIER	c.517+1817delA c.517+1817delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	71150701
chrX:71150713	AAAAAAAA others(3): Show AAAAAAAAAAG	A A	2	a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0187 a0001c0001t0001g0188	2	HG02280.hp1 HG03486.hp1 HG02280.hp1 HG03486.hp1	intron_variant	MODIFIER	c.517+1812_517+1821d others(12): Show c.517+1812_517+1821delAAAAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	71150713
chrX:71150718	A A	AG AG	3	a0001c0001t0001g0160 a0001c0001t0002g0150 a0006c0011t0001g0134 a0001c0001t0001g0160 a0001c0001t0002g0150 a0006c0011t0001g0134	3	HG01884.hp2 HG02257.hp1 HG03017.hp1 HG01884.hp2 HG02257.hp1 HG03017.hp1	intron_variant	MODIFIER	c.517+1813_517+1814i others(3): Show c.517+1813_517+1814insG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150718
chrX:71150718	A A	G G	127	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(124): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0047 a0001c0001t0001g0070 a0001c0001t0001g0080 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0196 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0007g0118 a0001c0001t0010g0147 a0001c0001t0013g0079 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	141	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(138): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA19005.hp1 NA19007.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19070.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19091.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.517+1813A>G c.517+1813A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150718
chrX:71150722	AG AG	A A	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA18612.hp1 NA18612.hp1	intron_variant	MODIFIER	c.517+1818delG c.517+1818delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150722
chrX:71150864	G G	A A	2	a0001c0001t0004g0018 a0001c0001t0004g0242 a0001c0001t0004g0018 a0001c0001t0004g0242	3	NA18945.hp1 NA18953.hp1 NA19076.hp1 NA18945.hp1 NA18953.hp1 NA19076.hp1	intron_variant	MODIFIER	c.517+1959G>A c.517+1959G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71150864
chrX:71150893	A A	ATTG ATTG	2	a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0187 a0001c0001t0001g0188	2	HG02280.hp1 HG03486.hp1 HG02280.hp1 HG03486.hp1	intron_variant	MODIFIER	c.517+1992_517+1994d others(5): Show c.517+1992_517+1994dupTTG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	71150893
chrX:71151037	G G	GC GC	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	NA18991.hp1 NA18991.hp1	intron_variant	MODIFIER	c.517+2134dupC c.517+2134dupC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	71151037
chrX:71151316	G G	GA GA	2	a0001c0001t0001g0211 a0002c0002t0001g0214 a0001c0001t0001g0211 a0002c0002t0001g0214	2	HG01891.hp1 NA19086.hp1 HG01891.hp1 NA19086.hp1	intron_variant	MODIFIER	c.518-2149dupA c.518-2149dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	71151316
chrX:71151316	GA GA	G G	2	a0001c0001t0002g0190 a0001c0001t0002g0205 a0001c0001t0002g0190 a0001c0001t0002g0205	2	HG02922.hp2 NA18906.hp2 HG02922.hp2 NA18906.hp2	intron_variant	MODIFIER	c.518-2149delA c.518-2149delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	71151316
chrX:71151379	AC AC	A A	1	a0001c0001t0002g0180 a0001c0001t0002g0180	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.518-2097delC c.518-2097delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71151379
chrX:71151493	G G	A A	1	a0001c0001t0001g0179 a0001c0001t0001g0179	1	HG02055.hp1 HG02055.hp1	intron_variant	MODIFIER	c.518-1984G>A c.518-1984G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71151493
chrX:71151576	G G	T T	1	a0001c0001t0004g0241 a0001c0001t0004g0241	1	HG02080.hp1 HG02080.hp1	intron_variant	MODIFIER	c.518-1901G>T c.518-1901G>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71151576
chrX:71151613	G G	A A	23	a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0187 others(20): Show a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0002g0130 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0011g0206 a0001c0003t0001g0129	23	HG00735.hp2 HG01081.hp1 HG02056.hp1 others(20): Show HG00735.hp2 HG01081.hp1 HG02056.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02622.hp2 HG02922.hp2 HG02970.hp1 HG03130.hp1 HG03453.hp1 HG03486.hp1 HG03516.hp2 HG03834.hp2 NA18984.hp1 NA18999.hp2 NA19012.hp1 NA19030.hp1 NA19240.hp1 NA20129.hp2	intron_variant	MODIFIER	c.518-1864G>A c.518-1864G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71151613
chrX:71151684	C C	A A	1	a0001c0001t0003g0163 a0001c0001t0003g0163	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.518-1793C>A c.518-1793C>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71151684
chrX:71151720	G G	C C	1	a0001c0001t0001g0139 a0001c0001t0001g0139	1	NA18999.hp1 NA18999.hp1	intron_variant	MODIFIER	c.518-1757G>C c.518-1757G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71151720
chrX:71151724	T T	G G	133	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(130): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0070 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0176 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0196 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0007g0118 a0001c0001t0009g0095 a0001c0001t0010g0147 a0001c0001t0013g0079 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	147	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(144): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp2 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA19005.hp1 NA19007.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19070.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19091.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.518-1753T>G c.518-1753T>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71151724
chrX:71152259	A A	G G	1	a0001c0001t0001g0212 a0001c0001t0001g0212	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.518-1218A>G c.518-1218A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71152259
chrX:71152405	T T	C C	151	a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0013 others(148): Show a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0047 a0001c0001t0001g0060 a0001c0001t0001g0070 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0009g0095 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0001t0013g0079 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	164	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(161): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02109.hp2 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18979.hp1 NA18984.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19070.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.518-1072T>C c.518-1072T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71152405
chrX:71153221	G G	C C	8	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(5): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0196 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132	8	HG02258.hp1 HG02572.hp1 HG02886.hp2 others(5): Show HG02258.hp1 HG02572.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03195.hp2 HG03209.hp1 NA18522.hp1	intron_variant	MODIFIER	c.518-256G>C c.518-256G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71153221
chrX:71153304	G G	C C	2	a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0187 a0001c0001t0001g0188	2	HG02280.hp1 HG03486.hp1 HG02280.hp1 HG03486.hp1	intron_variant	MODIFIER	c.518-173G>C c.518-173G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71153304
chrX:71153366	C C	T T	47	a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0114 others(44): Show a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0114 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0176 a0001c0001t0001g0234 a0001c0001t0002g0016 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0010g0147 a0001c0003t0001g0182 a0001c0010t0002g0157 a0003c0004t0002g0155 a0006c0011t0001g0134	50	HG00741.hp1 HG01070.hp1 HG01071.hp1 others(47): Show HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01099.hp1 HG01123.hp1 HG01175.hp1 HG01192.hp1 HG01361.hp2 HG01891.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02622.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03139.hp1 HG03239.hp2 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04228.hp1 HG06807.hp2 NA18906.hp1 NA18947.hp1 NA18999.hp1 NA19043.hp1 NA19058.hp1 NA19066.hp1 NA19079.hp1 NA20300.hp2 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.518-111C>T c.518-111C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	3/7		chrX	71153366
chrX:71153558	C C	T T	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	NA19065.hp1 NA19065.hp1	intron_variant	MODIFIER	c.577+22C>T c.577+22C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71153558
chrX:71153588	C C	T T	7	a0001c0001t0001g0001 a0001c0001t0001g0046 a0001c0001t0001g0219 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0046 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0007c0009t0001g0213	11	HG02015.hp1 HG02083.hp1 NA18747.hp1 others(8): Show HG02015.hp1 HG02083.hp1 NA18747.hp1 NA18947.hp2 NA18951.hp2 NA18954.hp1 NA18964.hp1 NA18994.hp1 NA18998.hp1 NA19068.hp1 NA19084.hp2	intron_variant	MODIFIER	c.577+52C>T c.577+52C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71153588
chrX:71153721	A A	G G	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG03704.hp1 HG03704.hp1	intron_variant	MODIFIER	c.577+185A>G c.577+185A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71153721
chrX:71153792	C C	G G	3	a0001c0001t0002g0190 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0001t0002g0190 a0001c0003t0001g0136 a0001c0003t0001g0137	3	HG02615.hp2 HG02630.hp1 NA18906.hp2 HG02615.hp2 HG02630.hp1 NA18906.hp2	intron_variant	MODIFIER	c.577+256C>G c.577+256C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71153792
chrX:71153858	G G	T T	2	a0001c0001t0001g0208 a0002c0002t0001g0210 a0001c0001t0001g0208 a0002c0002t0001g0210	2	HG02976.hp1 NA19030.hp2 HG02976.hp1 NA19030.hp2	intron_variant	MODIFIER	c.577+322G>T c.577+322G>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71153858
chrX:71153885	C C	T T	2	a0001c0001t0002g0016 a0001c0001t0002g0158 a0001c0001t0002g0016 a0001c0001t0002g0158	3	HG02922.hp1 NA18906.hp1 NA19043.hp1 HG02922.hp1 NA18906.hp1 NA19043.hp1	intron_variant	MODIFIER	c.577+349C>T c.577+349C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71153885
chrX:71153894	C C	T T	1	a0001c0001t0001g0176 a0001c0001t0001g0176	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.577+358C>T c.577+358C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71153894
chrX:71154009	C C	CA CA	1	a0001c0001t0004g0242 a0001c0001t0004g0242	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.577+475dupA c.577+475dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	71154009
chrX:71154076	C C	A A	4	a0001c0001t0001g0133 a0001c0001t0002g0190 a0001c0003t0001g0136 others(1): Show a0001c0001t0001g0133 a0001c0001t0002g0190 a0001c0003t0001g0136 a0001c0003t0001g0137	4	HG02615.hp2 HG02630.hp1 NA18906.hp2 others(1): Show HG02615.hp2 HG02630.hp1 NA18906.hp2 NA20129.hp2	intron_variant	MODIFIER	c.577+540C>A c.577+540C>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71154076
chrX:71154319	G G	A A	1	a0001c0001t0002g0244 a0001c0001t0002g0244	1	NA19056.hp1 NA19056.hp1	intron_variant	MODIFIER	c.577+783G>A c.577+783G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71154319
chrX:71154354	A A	G G	158	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(155): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0070 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0001t0013g0079 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213	173	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(170): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02486.hp1 HG02523.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18979.hp1 NA18984.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19076.hp1 NA19079.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.577+818A>G c.577+818A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71154354
chrX:71154372	G G	A A	15	a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 others(12): Show a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0020 a0001c0001t0001g0047 a0001c0001t0001g0106 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0128 a0001c0001t0002g0122 a0001c0001t0007g0118 a0001c0005t0001g0117	18	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(15): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG01069.hp1 HG01071.hp2 HG01081.hp2 HG01106.hp1 HG01123.hp2 HG01168.hp1 HG02074.hp1 HG02630.hp2 HG02683.hp1 HG03669.hp2 NA18991.hp2 NA20752.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.577+836G>A c.577+836G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71154372
chrX:71154743	G G	C C	1	a0001c0001t0001g0167 a0001c0001t0001g0167	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.578-471G>C c.578-471G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71154743
chrX:71154767	G G	A A	24	a0001c0001t0001g0218 a0001c0001t0001g0240 a0001c0001t0002g0003 others(21): Show a0001c0001t0001g0218 a0001c0001t0001g0240 a0001c0001t0002g0003 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251	27	HG00639.hp2 HG01109.hp1 HG01168.hp2 others(24): Show HG00639.hp2 HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01496.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02080.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG04115.hp1 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19007.hp1 NA19056.hp1 NA19076.hp1	intron_variant	MODIFIER	c.578-447G>A c.578-447G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71154767
chrX:71154767	G G	GT GT	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.578-442dupT c.578-442dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	71154767
chrX:71154772	T T	A A	1	a0001c0001t0002g0204 a0001c0001t0002g0204	1	HG01081.hp1 HG01081.hp1	intron_variant	MODIFIER	c.578-442T>A c.578-442T>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71154772
chrX:71155040	C C	T T	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	NA19088.hp1 NA19088.hp1	intron_variant	MODIFIER	c.578-174C>T c.578-174C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71155040
chrX:71155173	G G	A A	2	a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0115 a0001c0001t0001g0116	2	HG00140.hp1 HG01081.hp2 HG00140.hp1 HG01081.hp2	intron_variant	MODIFIER	c.578-41G>A c.578-41G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	4/7		chrX	71155173
chrX:71155402	T T	A A	1	a0001c0001t0002g0181 a0001c0001t0002g0181	1	NA20300.hp2 NA20300.hp2	intron_variant	MODIFIER	c.727+39T>A c.727+39T>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71155402
chrX:71155644	T T	C C	1	a0002c0002t0005g0146 a0002c0002t0005g0146	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.727+281T>C c.727+281T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71155644
chrX:71155799	C C	T T	1	a0006c0011t0001g0134 a0006c0011t0001g0134	1	HG03017.hp1 HG03017.hp1	intron_variant	MODIFIER	c.727+436C>T c.727+436C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71155799
chrX:71155800	G G	A A	28	a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0142 others(25): Show a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0142 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0002g0130 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0011g0206	28	HG00735.hp2 HG01081.hp1 HG01243.hp1 others(25): Show HG00735.hp2 HG01081.hp1 HG01243.hp1 HG01891.hp2 HG02056.hp1 HG02080.hp2 HG02109.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02698.hp1 HG02717.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03486.hp2 HG03834.hp2 NA18984.hp1 NA18999.hp2 NA19240.hp2 NA20300.hp2	intron_variant	MODIFIER	c.727+437G>A c.727+437G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71155800
chrX:71155937	C C	G G	3	a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132	3	HG02258.hp1 HG02886.hp2 NA18522.hp1 HG02258.hp1 HG02886.hp2 NA18522.hp1	intron_variant	MODIFIER	c.727+574C>G c.727+574C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71155937
chrX:71155968	G G	A A	3	a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166	3	HG01993.hp1 HG02622.hp1 NA21309.hp2 HG01993.hp1 HG02622.hp1 NA21309.hp2	intron_variant	MODIFIER	c.727+605G>A c.727+605G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71155968
chrX:71156019	G G	A A	125	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(122): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0003t0001g0129 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0005g0146 a0003c0004t0002g0155 a0007c0009t0001g0213	139	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(136): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19076.hp1 NA19084.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.727+656G>A c.727+656G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71156019
chrX:71156310	CCTCA CCTCA	C C	1	a0001c0001t0001g0192 a0001c0001t0001g0192	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.727+950_727+953del others(4): Show c.727+950_727+953delCACT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71156310
chrX:71156321	C C	G G	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	intron_variant	MODIFIER	c.727+958C>G c.727+958C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71156321
chrX:71156342	T T	C C	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	NA19010.hp2 NA19010.hp2	intron_variant	MODIFIER	c.727+979T>C c.727+979T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71156342
chrX:71156360	A A	G G	1	a0001c0003t0001g0137 a0001c0003t0001g0137	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.727+997A>G c.727+997A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71156360
chrX:71156516	G G	A A	21	a0001c0001t0002g0130 a0001c0001t0002g0168 a0001c0001t0002g0170 others(18): Show a0001c0001t0002g0130 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252	21	HG00735.hp2 HG01081.hp1 HG01243.hp1 others(18): Show HG00735.hp2 HG01081.hp1 HG01243.hp1 HG01891.hp2 HG02109.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02717.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp2 NA19240.hp2 NA20300.hp2	intron_variant	MODIFIER	c.727+1153G>A c.727+1153G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71156516
chrX:71156540	A A	G G	60	a0001c0001t0001g0014 a0001c0001t0001g0057 a0001c0001t0001g0114 others(57): Show a0001c0001t0001g0014 a0001c0001t0001g0057 a0001c0001t0001g0114 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0003g0019 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0194 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155	66	HG00639.hp2 HG00673.hp1 HG01070.hp1 others(63): Show HG00639.hp2 HG00673.hp1 HG01070.hp1 HG01071.hp1 HG01099.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02080.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02615.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 NA18906.hp1 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1 NA20805.hp1	intron_variant	MODIFIER	c.727+1177A>G c.727+1177A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71156540
chrX:71156687	C C	T T	2	a0001c0001t0001g0023 a0001c0001t0001g0056 a0001c0001t0001g0023 a0001c0001t0001g0056	2	HG00323.hp1 HG03688.hp1 HG00323.hp1 HG03688.hp1	intron_variant	MODIFIER	c.727+1324C>T c.727+1324C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71156687
chrX:71157134	G G	A A	1	a0001c0001t0003g0166 a0001c0001t0003g0166	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.727+1771G>A c.727+1771G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71157134
chrX:71157287	C C	CTTA CTTA	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.727+1927_727+1929d others(5): Show c.727+1927_727+1929dupATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71157287
chrX:71157287	C C	CTTAT CTTAT	102	a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0013 others(99): Show a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0070 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0142 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0165 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0211 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0233 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0058 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0162 a0001c0001t0002g0171 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0199 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	114	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(111): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG01070.hp1 HG01071.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp2 HG03041.hp1 HG03139.hp1 HG03195.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03669.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG04199.hp1 HG06807.hp1 NA18747.hp1 NA18941.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18960.hp1 NA18964.hp1 NA18965.hp1 NA18970.hp1 NA18974.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19056.hp1 NA19062.hp1 NA19066.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.727+1958_727+1961d others(6): Show c.727+1958_727+1961dupTATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71157287
chrX:71157287	C C	CTTATTTA others(1): Show CTTATTTAT	21	a0001c0001t0001g0004 a0001c0001t0001g0164 a0001c0001t0001g0192 others(18): Show a0001c0001t0001g0004 a0001c0001t0001g0164 a0001c0001t0001g0192 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0150 a0001c0001t0002g0158 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0200 a0001c0001t0002g0204 a0001c0001t0002g0229 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0249 a0002c0002t0001g0210	23	HG00738.hp1 HG00741.hp1 HG01069.hp1 others(20): Show HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01071.hp2 HG01081.hp1 HG01109.hp1 HG01243.hp1 HG02257.hp1 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02886.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03540.hp1 NA18906.hp1 NA19030.hp2 NA19043.hp1 NA21309.hp2	intron_variant	MODIFIER	c.727+1954_727+1961d others(10): Show c.727+1954_727+1961dupTATTTATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71157287
chrX:71157287	C C	CTTATTTA others(5): Show CTTATTTATTTAT	3	a0001c0001t0002g0174 a0001c0001t0002g0205 a0001c0001t0002g0217 a0001c0001t0002g0174 a0001c0001t0002g0205 a0001c0001t0002g0217	3	HG02922.hp2 HG02976.hp2 HG04115.hp1 HG02922.hp2 HG02976.hp2 HG04115.hp1	intron_variant	MODIFIER	c.727+1950_727+1961d others(14): Show c.727+1950_727+1961dupTATTTATTTATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71157287
chrX:71157287	CTTAT CTTAT	C C	13	a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0131 others(10): Show a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0131 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0190 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182	14	HG01167.hp1 HG01169.hp2 HG02109.hp1 others(11): Show HG01167.hp1 HG01169.hp2 HG02109.hp1 HG02258.hp1 HG02451.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG02683.hp2 HG02886.hp2 HG03225.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2	intron_variant	MODIFIER	c.727+1958_727+1961d others(6): Show c.727+1958_727+1961delTATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71157287
chrX:71157287	CTTATTTA others(1): Show CTTATTTAT	C C	8	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(5): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196	8	HG02055.hp1 HG02572.hp1 HG02896.hp1 others(5): Show HG02055.hp1 HG02572.hp1 HG02896.hp1 HG02897.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp1 NA19030.hp1	intron_variant	MODIFIER	c.727+1954_727+1961d others(10): Show c.727+1954_727+1961delTATTTATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71157287
chrX:71157287	CTTATTTA others(5): Show CTTATTTATTTAT	C C	4	a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 others(1): Show a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0042	4	HG00735.hp1 HG01074.hp1 HG01346.hp2 others(1): Show HG00735.hp1 HG01074.hp1 HG01346.hp2 HG03669.hp1	intron_variant	MODIFIER	c.727+1950_727+1961d others(14): Show c.727+1950_727+1961delTATTTATTTATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71157287
chrX:71157363	G G	A A	25	a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0168 others(22): Show a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166	25	HG00735.hp2 HG01081.hp1 HG01243.hp1 others(22): Show HG00735.hp2 HG01081.hp1 HG01243.hp1 HG01891.hp2 HG01993.hp1 HG02109.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03540.hp1 NA19240.hp2 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.727+2000G>A c.727+2000G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71157363
chrX:71157819	G G	A A	17	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(14): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0131 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0002g0190 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182	17	HG02055.hp1 HG02258.hp1 HG02451.hp2 others(14): Show HG02055.hp1 HG02258.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02630.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA19030.hp1	intron_variant	MODIFIER	c.727+2456G>A c.727+2456G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71157819
chrX:71157862	G G	A A	1	a0001c0001t0002g0236 a0001c0001t0002g0236	1	HG01943.hp1 HG01943.hp1	intron_variant	MODIFIER	c.727+2499G>A c.727+2499G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71157862
chrX:71158015	A A	T T	6	a0001c0001t0001g0131 a0001c0001t0002g0190 a0001c0003t0001g0129 others(3): Show a0001c0001t0001g0131 a0001c0001t0002g0190 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182	6	HG02451.hp2 HG02559.hp2 HG02615.hp2 others(3): Show HG02451.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG06807.hp2 NA18906.hp2	intron_variant	MODIFIER	c.727+2652A>T c.727+2652A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158015
chrX:71158062	T T	TTTAA TTTAA	1	a0002c0002t0001g0084 a0002c0002t0001g0084	1	HG02738.hp1 HG02738.hp1	intron_variant	MODIFIER	c.727+2726_727+2729d others(6): Show c.727+2726_727+2729dupAATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71158062
chrX:71158062	TTTAA TTTAA	T T	5	a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 others(2): Show a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0042 a0001c0001t0001g0082	5	HG00735.hp1 HG01074.hp1 HG01346.hp2 others(2): Show HG00735.hp1 HG01074.hp1 HG01346.hp2 HG02132.hp1 HG03669.hp1	intron_variant	MODIFIER	c.727+2726_727+2729d others(6): Show c.727+2726_727+2729delAATT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71158062
chrX:71158154	C C	T T	1	a0001c0001t0001g0221 a0001c0001t0001g0221	1	NA18947.hp2 NA18947.hp2	intron_variant	MODIFIER	c.727+2791C>T c.727+2791C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158154
chrX:71158381	G G	A A	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.727+3018G>A c.727+3018G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158381
chrX:71158679	T T	G G	139	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(136): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	154	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(151): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.727+3316T>G c.727+3316T>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158679
chrX:71158804	T T	C C	3	a0001c0001t0001g0218 a0001c0008t0001g0043 a0002c0002t0001g0085 a0001c0001t0001g0218 a0001c0008t0001g0043 a0002c0002t0001g0085	3	HG02523.hp1 NA18990.hp1 NA19007.hp1 HG02523.hp1 NA18990.hp1 NA19007.hp1	intron_variant	MODIFIER	c.727+3441T>C c.727+3441T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158804
chrX:71158849	C C	G G	6	a0001c0001t0001g0010 a0001c0001t0001g0048 a0001c0001t0001g0059 others(3): Show a0001c0001t0001g0010 a0001c0001t0001g0048 a0001c0001t0001g0059 a0001c0001t0001g0072 a0001c0001t0001g0083 a0001c0001t0001g0101	7	NA18940.hp1 NA18955.hp1 NA18967.hp1 others(4): Show NA18940.hp1 NA18955.hp1 NA18967.hp1 NA18989.hp1 NA18991.hp1 NA19060.hp1 NA19065.hp2	intron_variant	MODIFIER	c.727+3486C>G c.727+3486C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158849
chrX:71158879	A A	G G	2	a0001c0001t0001g0023 a0001c0001t0001g0056 a0001c0001t0001g0023 a0001c0001t0001g0056	2	HG00323.hp1 HG03688.hp1 HG00323.hp1 HG03688.hp1	intron_variant	MODIFIER	c.727+3516A>G c.727+3516A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158879
chrX:71158995	C C	T T	53	a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 others(50): Show a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0194 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155	58	HG00639.hp2 HG00673.hp1 HG01109.hp1 others(55): Show HG00639.hp2 HG00673.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02080.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02615.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 NA18906.hp1 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1	intron_variant	MODIFIER	c.727+3632C>T c.727+3632C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71158995
chrX:71159011	T T	C C	139	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(136): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	154	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(151): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.727+3648T>C c.727+3648T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159011
chrX:71159019	C C	T T	1	a0001c0010t0002g0157 a0001c0010t0002g0157	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.727+3656C>T c.727+3656C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159019
chrX:71159320	C C	CA CA	2	a0001c0001t0002g0151 a0001c0001t0006g0028 a0001c0001t0002g0151 a0001c0001t0006g0028	2	HG01175.hp2 HG02896.hp2 HG01175.hp2 HG02896.hp2	intron_variant	MODIFIER	c.727+3967dupA c.727+3967dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159320
chrX:71159329	A A	G G	6	a0001c0001t0001g0131 a0001c0001t0002g0190 a0001c0003t0001g0129 others(3): Show a0001c0001t0001g0131 a0001c0001t0002g0190 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182	6	HG02451.hp2 HG02559.hp2 HG02615.hp2 others(3): Show HG02451.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG06807.hp2 NA18906.hp2	intron_variant	MODIFIER	c.727+3966A>G c.727+3966A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159329
chrX:71159344	AAAAAG AAAAAG	A A	1	a0001c0003t0001g0136 a0001c0003t0001g0136	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.727+3995_727+3999d others(7): Show c.727+3995_727+3999delAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159344
chrX:71159629	C C	T T	1	a0001c0001t0001g0060 a0001c0001t0001g0060	1	NA20300.hp1 NA20300.hp1	intron_variant	MODIFIER	c.727+4266C>T c.727+4266C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159629
chrX:71159641	C C	CG CG	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA19063.hp1 NA19063.hp1	intron_variant	MODIFIER	c.727+4281dupG c.727+4281dupG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159641
chrX:71159683	T T	G G	1	a0001c0001t0002g0237 a0001c0001t0002g0237	1	HG01993.hp2 HG01993.hp2	intron_variant	MODIFIER	c.727+4320T>G c.727+4320T>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159683
chrX:71159726	C C	CT CT	138	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(135): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	152	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(149): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.727+4375dupT c.727+4375dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159726
chrX:71159726	C C	CTT CTT	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	intron_variant	MODIFIER	c.727+4374_727+4375d others(4): Show c.727+4374_727+4375dupTT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159726
chrX:71159776	G G	A A	1	a0001c0001t0001g0131 a0001c0001t0001g0131	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.728-4367G>A c.728-4367G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159776
chrX:71159890	A A	AT AT	24	a0001c0001t0001g0015 a0001c0001t0001g0053 a0001c0001t0001g0060 others(21): Show a0001c0001t0001g0015 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0067 a0001c0001t0001g0072 a0001c0001t0001g0091 a0001c0001t0001g0124 a0001c0001t0001g0141 a0001c0001t0001g0240 a0001c0001t0002g0168 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0003g0166 a0001c0001t0003g0169	25	HG00621.hp1 HG00735.hp2 HG01167.hp1 others(22): Show HG00621.hp1 HG00735.hp2 HG01167.hp1 HG01169.hp2 HG01175.hp1 HG01243.hp1 HG01255.hp1 HG02273.hp2 HG02451.hp1 HG02602.hp1 HG02622.hp1 HG02717.hp1 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03225.hp1 HG03453.hp1 HG03942.hp1 NA18967.hp1 NA18998.hp2 NA19063.hp1 NA19240.hp2 NA20300.hp1	intron_variant	MODIFIER	c.728-4229dupT c.728-4229dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159890
chrX:71159890	A A	ATT ATT	8	a0001c0001t0001g0025 a0001c0001t0002g0177 a0001c0001t0002g0178 others(5): Show a0001c0001t0001g0025 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0204	8	HG01081.hp1 HG01891.hp2 HG02559.hp1 others(5): Show HG01081.hp1 HG01891.hp2 HG02559.hp1 HG02809.hp2 HG03139.hp1 HG03486.hp2 HG03669.hp1 NA20300.hp2	intron_variant	MODIFIER	c.728-4230_728-4229d others(4): Show c.728-4230_728-4229dupTT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159890
chrX:71159890	AT AT	A A	67	a0001c0001t0001g0036 a0001c0001t0001g0054 a0001c0001t0001g0108 others(64): Show a0001c0001t0001g0036 a0001c0001t0001g0054 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0191 a0001c0001t0001g0196 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0244 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0241 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0013g0079 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155 a0007c0009t0001g0213	71	HG00639.hp2 HG00673.hp1 HG01109.hp1 others(68): Show HG00639.hp2 HG00673.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01993.hp2 HG02055.hp1 HG02080.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18964.hp2 NA18970.hp1 NA18994.hp1 NA19043.hp1 NA19056.hp1 NA19070.hp1 NA19083.hp1 NA19240.hp1 NA20129.hp2	intron_variant	MODIFIER	c.728-4229delT c.728-4229delT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159890
chrX:71159890	ATT ATT	A A	4	a0001c0001t0001g0075 a0001c0001t0001g0212 a0001c0001t0002g0243 others(1): Show a0001c0001t0001g0075 a0001c0001t0001g0212 a0001c0001t0002g0243 a0002c0002t0001g0210	4	HG00738.hp1 HG01169.hp1 NA19030.hp2 others(1): Show HG00738.hp1 HG01169.hp1 NA19030.hp2 NA20129.hp1	intron_variant	MODIFIER	c.728-4230_728-4229d others(4): Show c.728-4230_728-4229delTT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159890
chrX:71159890	ATTT ATTT	A A	1	a0001c0001t0001g0208 a0001c0001t0001g0208	1	HG02976.hp1 HG02976.hp1	intron_variant	MODIFIER	c.728-4231_728-4229d others(5): Show c.728-4231_728-4229delTTT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71159890
chrX:71159963	C C	T T	256	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(253): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0240 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0006g0011 a0001c0001t0006g0028 a0001c0001t0006g0195 a0001c0001t0007g0118 a0001c0001t0009g0095 a0001c0001t0010g0147 a0001c0001t0011g0206 a0001c0001t0012g0007 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0008t0001g0043 a0001c0010t0002g0157 a0002c0002t0001g0008 a0002c0002t0001g0084 a0002c0002t0001g0085 a0002c0002t0001g0092 a0002c0002t0001g0210 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0004c0006t0001g0009 a0005c0012t0001g0123 a0006c0011t0001g0134 a0007c0009t0001g0213 a0008c0007t0008g0052	277	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(274): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18984.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19076.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.728-4180C>T c.728-4180C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159963
chrX:71159964	G G	C C	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.728-4179G>C c.728-4179G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71159964
chrX:71160028	A A	G G	139	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(136): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	154	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(151): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.728-4115A>G c.728-4115A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71160028
chrX:71160031	C C	T T	2	a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0061 a0001c0001t0001g0062	2	HG02080.hp2 HG03239.hp1 HG02080.hp2 HG03239.hp1	intron_variant	MODIFIER	c.728-4112C>T c.728-4112C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71160031
chrX:71160213	C C	CT CT	30	a0001c0001t0001g0021 a0001c0001t0001g0105 a0001c0001t0001g0179 others(27): Show a0001c0001t0001g0021 a0001c0001t0001g0105 a0001c0001t0001g0179 a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0006g0195	30	HG00735.hp2 HG01081.hp1 HG01243.hp1 others(27): Show HG00735.hp2 HG01081.hp1 HG01243.hp1 HG01255.hp1 HG01891.hp2 HG01993.hp1 HG02055.hp1 HG02109.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03540.hp1 NA18974.hp1 NA19012.hp1 NA19062.hp1 NA19240.hp2 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.728-3915dupT c.728-3915dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71160213
chrX:71160213	CT CT	C C	3	a0001c0001t0001g0051 a0001c0001t0001g0125 a0001c0001t0001g0133 a0001c0001t0001g0051 a0001c0001t0001g0125 a0001c0001t0001g0133	3	HG01070.hp1 NA19084.hp1 NA20129.hp2 HG01070.hp1 NA19084.hp1 NA20129.hp2	intron_variant	MODIFIER	c.728-3915delT c.728-3915delT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71160213
chrX:71160217	T T	C C	3	a0001c0001t0002g0152 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0152 a0001c0001t0002g0184 a0001c0001t0002g0185	3	HG02895.hp1 HG02897.hp1 HG03516.hp1 HG02895.hp1 HG02897.hp1 HG03516.hp1	intron_variant	MODIFIER	c.728-3926T>C c.728-3926T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71160217
chrX:71160218	T T	C C	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	intron_variant	MODIFIER	c.728-3925T>C c.728-3925T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71160218
chrX:71160266	G G	C C	9	a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 others(6): Show a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0153 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0005g0194	9	HG01123.hp1 HG02109.hp2 HG02486.hp1 others(6): Show HG01123.hp1 HG02109.hp2 HG02486.hp1 HG02723.hp2 HG03516.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 NA19240.hp1	intron_variant	MODIFIER	c.728-3877G>C c.728-3877G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71160266
chrX:71160468	C C	T T	6	a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 others(3): Show a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249	7	HG01884.hp1 HG02145.hp1 HG02809.hp1 others(4): Show HG01884.hp1 HG02145.hp1 HG02809.hp1 HG03041.hp2 HG03453.hp2 HG03471.hp1 HG06807.hp1	intron_variant	MODIFIER	c.728-3675C>T c.728-3675C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71160468
chrX:71160907	T T	A A	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.728-3236T>A c.728-3236T>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71160907
chrX:71161115	C C	CT CT	4	a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0218 others(1): Show a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0218 a0002c0002t0001g0214	4	NA18991.hp2 NA18998.hp2 NA19007.hp1 others(1): Show NA18991.hp2 NA18998.hp2 NA19007.hp1 NA19086.hp1	intron_variant	MODIFIER	c.728-3012dupT c.728-3012dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71161115
chrX:71161115	CT CT	C C	80	a0001c0001t0001g0021 a0001c0001t0001g0031 a0001c0001t0001g0050 others(77): Show a0001c0001t0001g0021 a0001c0001t0001g0031 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0075 a0001c0001t0001g0096 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0122 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0190 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0003g0019 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0010t0002g0157 a0002c0002t0001g0210 a0002c0002t0005g0146 a0003c0004t0002g0155	85	HG00639.hp2 HG00673.hp1 HG00738.hp1 others(82): Show HG00639.hp2 HG00673.hp1 HG00738.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02055.hp1 HG02080.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18948.hp1 NA18953.hp1 NA18962.hp1 NA18970.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19065.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2	intron_variant	MODIFIER	c.728-3012delT c.728-3012delT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71161115
chrX:71161115	CTT CTT	C C	2	a0001c0001t0001g0108 a0001c0001t0002g0224 a0001c0001t0001g0108 a0001c0001t0002g0224	2	HG01257.hp2 HG02896.hp1 HG01257.hp2 HG02896.hp1	intron_variant	MODIFIER	c.728-3013_728-3012d others(4): Show c.728-3013_728-3012delTT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71161115
chrX:71161361	G G	A A	1	a0001c0001t0001g0138 a0001c0001t0001g0138	1	HG04228.hp1 HG04228.hp1	intron_variant	MODIFIER	c.728-2782G>A c.728-2782G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71161361
chrX:71161706	G G	A A	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG01515.hp1 HG01515.hp1	intron_variant	MODIFIER	c.728-2437G>A c.728-2437G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71161706
chrX:71161842	G G	A A	9	a0001c0001t0001g0014 a0001c0001t0001g0114 a0001c0001t0001g0115 others(6): Show a0001c0001t0001g0014 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0007g0118 a0001c0005t0001g0117	10	HG00140.hp1 HG01070.hp1 HG01071.hp1 others(7): Show HG00140.hp1 HG01070.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01175.hp1 HG01192.hp1 HG02683.hp1 NA20805.hp1	intron_variant	MODIFIER	c.728-2301G>A c.728-2301G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71161842
chrX:71161970	T T	C C	20	a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 others(17): Show a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0003g0169	20	HG00735.hp2 HG01081.hp1 HG01243.hp1 others(17): Show HG00735.hp2 HG01081.hp1 HG01243.hp1 HG01255.hp1 HG01891.hp2 HG02109.hp1 HG02451.hp1 HG02559.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp2 NA19240.hp2 NA20300.hp2	intron_variant	MODIFIER	c.728-2173T>C c.728-2173T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71161970
chrX:71162116	A A	AT AT	4	a0001c0001t0001g0047 a0001c0001t0001g0059 a0001c0001t0001g0208 others(1): Show a0001c0001t0001g0047 a0001c0001t0001g0059 a0001c0001t0001g0208 a0001c0001t0002g0151	4	HG02896.hp2 HG02976.hp1 NA18991.hp2 others(1): Show HG02896.hp2 HG02976.hp1 NA18991.hp2 NA19065.hp2	intron_variant	MODIFIER	c.728-2015dupT c.728-2015dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71162116
chrX:71162116	AT AT	A A	10	a0001c0001t0001g0131 a0001c0001t0001g0167 a0001c0001t0001g0192 others(7): Show a0001c0001t0001g0131 a0001c0001t0001g0167 a0001c0001t0001g0192 a0001c0001t0001g0219 a0001c0001t0002g0190 a0001c0001t0005g0111 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182	10	HG02258.hp1 HG02451.hp2 HG02559.hp2 others(7): Show HG02258.hp1 HG02451.hp2 HG02559.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02818.hp1 HG06807.hp2 NA18906.hp2 NA18954.hp1	intron_variant	MODIFIER	c.728-2015delT c.728-2015delT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	71162116
chrX:71162314	G G	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG01346.hp2 HG01346.hp2	intron_variant	MODIFIER	c.728-1829G>C c.728-1829G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71162314
chrX:71162332	A A	T T	1	a0001c0001t0001g0191 a0001c0001t0001g0191	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.728-1811A>T c.728-1811A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71162332
chrX:71162425	T T	C C	135	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(132): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0211 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	150	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(147): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.728-1718T>C c.728-1718T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71162425
chrX:71162608	G G	A A	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG01346.hp2 HG01346.hp2	intron_variant	MODIFIER	c.728-1535G>A c.728-1535G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71162608
chrX:71162793	C C	T T	1	a0001c0001t0002g0058 a0001c0001t0002g0058	1	NA19083.hp1 NA19083.hp1	intron_variant	MODIFIER	c.728-1350C>T c.728-1350C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71162793
chrX:71162983	A A	G G	1	a0001c0001t0002g0122 a0001c0001t0002g0122	1	HG03669.hp2 HG03669.hp2	intron_variant	MODIFIER	c.728-1160A>G c.728-1160A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71162983
chrX:71163462	G G	A A	1	a0001c0001t0010g0147 a0001c0001t0010g0147	1	HG02165.hp1 HG02165.hp1	intron_variant	MODIFIER	c.728-681G>A c.728-681G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71163462
chrX:71163594	T T	C C	136	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(133): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0211 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	151	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(148): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.728-549T>C c.728-549T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71163594
chrX:71163818	A A	G G	5	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(2): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0196	5	HG02572.hp1 HG02896.hp1 HG02897.hp2 others(2): Show HG02572.hp1 HG02896.hp1 HG02897.hp2 HG03195.hp2 HG03209.hp1	intron_variant	MODIFIER	c.728-325A>G c.728-325A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71163818
chrX:71163977	G G	A A	1	a0001c0001t0001g0221 a0001c0001t0001g0221	1	NA18947.hp2 NA18947.hp2	intron_variant	MODIFIER	c.728-166G>A c.728-166G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71163977
chrX:71164080	C C	T T	11	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(8): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132	11	HG02055.hp1 HG02258.hp1 HG02572.hp1 others(8): Show HG02055.hp1 HG02258.hp1 HG02572.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp1 NA18522.hp1 NA19030.hp1	intron_variant	MODIFIER	c.728-63C>T c.728-63C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	5/7		chrX	71164080
chrX:71164416	T T	C C	1	a0001c0001t0002g0201 a0001c0001t0002g0201	1	NA18999.hp2 NA18999.hp2	intron_variant	MODIFIER	c.913+88T>C c.913+88T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71164416
chrX:71164417	C C	T T	97	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(94): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155	102	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(99): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.913+89C>T c.913+89C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71164417
chrX:71164499	A A	G G	11	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(8): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132	11	HG02055.hp1 HG02258.hp1 HG02572.hp1 others(8): Show HG02055.hp1 HG02258.hp1 HG02572.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp1 NA18522.hp1 NA19030.hp1	intron_variant	MODIFIER	c.913+171A>G c.913+171A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71164499
chrX:71164651	T T	C C	32	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(29): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0070 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0106 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0164 a0001c0001t0001g0211 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0005t0001g0117 a0005c0012t0001g0123 a0007c0009t0001g0213	41	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(38): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp1 HG01192.hp1 HG01891.hp1 HG02015.hp1 HG02083.hp1 HG02257.hp2 HG02630.hp2 HG02683.hp1 HG02965.hp1 HG03579.hp1 NA18747.hp1 NA18941.hp2 NA18951.hp2 NA18954.hp1 NA18964.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19062.hp1 NA19070.hp1 NA19084.hp2 NA19091.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.913+323T>C c.913+323T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71164651
chrX:71164836	A A	T T	1	a0001c0001t0001g0179 a0001c0001t0001g0179	1	HG02055.hp1 HG02055.hp1	intron_variant	MODIFIER	c.913+508A>T c.913+508A>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71164836
chrX:71165225	C C	T T	1	a0001c0001t0003g0099 a0001c0001t0003g0099	1	HG01993.hp1 HG01993.hp1	intron_variant	MODIFIER	c.913+897C>T c.913+897C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71165225
chrX:71165279	G G	GA GA	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.913+952dupA c.913+952dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165279
chrX:71165287	T T	TG TG	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.913+962dupG c.913+962dupG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165287
chrX:71165351	TC TC	T T	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.913+1026delC c.913+1026delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165351
chrX:71165381	C C	T T	1	a0001c0003t0001g0129 a0001c0003t0001g0129	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.913+1053C>T c.913+1053C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71165381
chrX:71165405	G G	GA GA	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.913+1081dupA c.913+1081dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165405
chrX:71165442	TC TC	T T	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.913+1118delC c.913+1118delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165442
chrX:71165458	A A	AG AG	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.913+1131dupG c.913+1131dupG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165458
chrX:71165497	G G	T T	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG03704.hp1 HG03704.hp1	intron_variant	MODIFIER	c.913+1169G>T c.913+1169G>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71165497
chrX:71165556	T T	C C	135	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(132): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0211 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0250 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0001t0007g0118 a0001c0001t0013g0079 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0005t0001g0117 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155 a0005c0012t0001g0123 a0007c0009t0001g0213	150	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(147): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18964.hp1 NA18970.hp1 NA18979.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.913+1228T>C c.913+1228T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71165556
chrX:71165583	G G	C C	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	intron_variant	MODIFIER	c.913+1255G>C c.913+1255G>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71165583
chrX:71165705	A A	AT AT	2	a0001c0001t0001g0021 a0001c0001t0001g0047 a0001c0001t0001g0021 a0001c0001t0001g0047	2	NA18991.hp2 NA19062.hp1 NA18991.hp2 NA19062.hp1	intron_variant	MODIFIER	c.914-1297dupT c.914-1297dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165705
chrX:71165787	G G	GC GC	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-1222dupC c.914-1222dupC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165787
chrX:71165905	A A	G G	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-1106A>G c.914-1106A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71165905
chrX:71165945	TC TC	T T	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-1063delC c.914-1063delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71165945
chrX:71166055	C C	CT CT	7	a0001c0001t0001g0054 a0001c0001t0001g0075 a0001c0001t0001g0160 others(4): Show a0001c0001t0001g0054 a0001c0001t0001g0075 a0001c0001t0001g0160 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0250 a0008c0007t0008g0052	7	HG01884.hp2 HG02280.hp1 HG02818.hp2 others(4): Show HG01884.hp2 HG02280.hp1 HG02818.hp2 HG03195.hp1 HG03486.hp1 NA19006.hp1 NA20129.hp1	intron_variant	MODIFIER	c.914-945dupT c.914-945dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166055
chrX:71166071	AG AG	A A	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-936delG c.914-936delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166071
chrX:71166087	CT CT	C C	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-919delT c.914-919delT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166087
chrX:71166095	G G	GT GT	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-913dupT c.914-913dupT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166095
chrX:71166136	AT AT	A A	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-872delT c.914-872delT	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166136
chrX:71166170	G G	T T	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-841G>T c.914-841G>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166170
chrX:71166171	T T	C C	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-840T>C c.914-840T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166171
chrX:71166226	G G	A A	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG01346.hp2 HG01346.hp2	intron_variant	MODIFIER	c.914-785G>A c.914-785G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166226
chrX:71166274	TG TG	T T	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-735delG c.914-735delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166274
chrX:71166324	C C	T T	1	a0001c0001t0002g0199 a0001c0001t0002g0199	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.914-687C>T c.914-687C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166324
chrX:71166378	C C	T T	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	NA19088.hp1 NA19088.hp1	intron_variant	MODIFIER	c.914-633C>T c.914-633C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166378
chrX:71166404	C C	T T	6	a0001c0001t0001g0131 a0001c0001t0002g0190 a0001c0003t0001g0129 others(3): Show a0001c0001t0001g0131 a0001c0001t0002g0190 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182	6	HG02451.hp2 HG02559.hp2 HG02615.hp2 others(3): Show HG02451.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG06807.hp2 NA18906.hp2	intron_variant	MODIFIER	c.914-607C>T c.914-607C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166404
chrX:71166457	C C	CA CA	2	a0001c0001t0001g0060 a0001c0001t0001g0081 a0001c0001t0001g0060 a0001c0001t0001g0081	2	HG00741.hp2 NA20300.hp1 HG00741.hp2 NA20300.hp1	intron_variant	MODIFIER	c.914-539dupA c.914-539dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166457
chrX:71166457	CA CA	C C	88	a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0002g0003 others(85): Show a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0194 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0010t0002g0157 a0002c0002t0001g0214 a0002c0002t0005g0146 a0003c0004t0002g0155 a0007c0009t0001g0213	93	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(90): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA18994.hp1 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19086.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.914-539delA c.914-539delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166457
chrX:71166457	CAA CAA	C C	11	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(8): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132	11	HG02055.hp1 HG02258.hp1 HG02572.hp1 others(8): Show HG02055.hp1 HG02258.hp1 HG02572.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp1 NA18522.hp1 NA19030.hp1	intron_variant	MODIFIER	c.914-540_914-539del others(2): Show c.914-540_914-539delAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166457
chrX:71166616	A A	AG AG	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-394dupG c.914-394dupG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166616
chrX:71166622	C C	T T	1	a0001c0001t0001g0090 a0001c0001t0001g0090	1	HG00099.hp2 HG00099.hp2	intron_variant	MODIFIER	c.914-389C>T c.914-389C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166622
chrX:71166669	T T	TG TG	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.914-339dupG c.914-339dupG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	71166669
chrX:71166975	C C	G G	1	a0001c0001t0003g0099 a0001c0001t0003g0099	1	HG01993.hp1 HG01993.hp1	intron_variant	MODIFIER	c.914-36C>G c.914-36C>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	6/7		chrX	71166975
chrX:71167817	G G	T T	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1703+17G>T c.1703+17G>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71167817
chrX:71167818	T T	G G	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1703+18T>G c.1703+18T>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71167818
chrX:71167835	AC AC	A A	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.1703+39delC c.1703+39delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71167835
chrX:71167849	TC TC	T T	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.1703+53delC c.1703+53delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71167849
chrX:71167921	A A	AC AC	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1703+125dupC c.1703+125dupC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71167921
chrX:71167973	TC TC	T T	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.1703+175delC c.1703+175delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71167973
chrX:71168029	AG AG	A A	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.1703+231delG c.1703+231delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168029
chrX:71168082	C C	T T	1	a0001c0001t0001g0121 a0001c0001t0001g0121	1	NA20752.hp1 NA20752.hp1	intron_variant	MODIFIER	c.1703+282C>T c.1703+282C>T	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168082
chrX:71168146	AC AC	A A	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1703+348delC c.1703+348delC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168146
chrX:71168206	G G	A A	5	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(2): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0196	5	HG02572.hp1 HG02896.hp1 HG02897.hp2 others(2): Show HG02572.hp1 HG02896.hp1 HG02897.hp2 HG03195.hp2 HG03209.hp1	intron_variant	MODIFIER	c.1703+406G>A c.1703+406G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168206
chrX:71168343	A A	AAC AAC	1	a0001c0001t0002g0107 a0001c0001t0002g0107	1	HG03540.hp1 HG03540.hp1	intron_variant	MODIFIER	c.1703+561_1703+562d others(4): Show c.1703+561_1703+562dupCA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168343
chrX:71168363	T T	C C	22	a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0168 others(19): Show a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252	22	HG00735.hp2 HG01081.hp1 HG01243.hp1 others(19): Show HG00735.hp2 HG01081.hp1 HG01243.hp1 HG01891.hp2 HG02109.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02717.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03540.hp1 NA19240.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1703+563T>C c.1703+563T>C	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168363
chrX:71168447	AG AG	A A	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1703+650delG c.1703+650delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168447
chrX:71168575	CA CA	C C	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.1704-673delA c.1704-673delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168575
chrX:71168615	C C	A A	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1704-639C>A c.1704-639C>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168615
chrX:71168677	G G	GC GC	1	a0002c0002t0005g0146 a0002c0002t0005g0146	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.1704-573dupC c.1704-573dupC	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168677
chrX:71168705	G G	A A	25	a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0168 others(22): Show a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166	25	HG00735.hp2 HG01081.hp1 HG01243.hp1 others(22): Show HG00735.hp2 HG01081.hp1 HG01243.hp1 HG01891.hp2 HG01993.hp1 HG02109.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03540.hp1 NA19240.hp2 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1704-549G>A c.1704-549G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168705
chrX:71168721	C C	CA CA	1	a0001c0001t0001g0100 a0001c0001t0001g0100	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.1704-520dupA c.1704-520dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168721
chrX:71168721	CA CA	C C	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.1704-520delA c.1704-520delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168721
chrX:71168735	G G	GA GA	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1704-510dupA c.1704-510dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168735
chrX:71168747	GAGAA GAGAA	G G	7	a0001c0001t0003g0019 a0001c0001t0003g0169 a0001c0001t0003g0245 others(4): Show a0001c0001t0003g0019 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249	8	HG01255.hp1 HG01884.hp1 HG02145.hp1 others(5): Show HG01255.hp1 HG01884.hp1 HG02145.hp1 HG02809.hp1 HG03041.hp2 HG03453.hp2 HG03471.hp1 HG06807.hp1	intron_variant	MODIFIER	c.1704-499_1704-496d others(6): Show c.1704-499_1704-496delAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168747
chrX:71168749	GA GA	G G	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1704-502delA c.1704-502delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168749
chrX:71168779	GAAGA GAAGA	G G	1	a0001c0001t0002g0156 a0001c0001t0002g0156	1	HG02647.hp1 HG02647.hp1	intron_variant	MODIFIER	c.1704-462_1704-459d others(6): Show c.1704-462_1704-459delAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168779
chrX:71168792	A A	G G	96	a0001c0001t0001g0015 a0001c0001t0001g0108 a0001c0001t0001g0109 others(93): Show a0001c0001t0001g0015 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0131 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155	102	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(99): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1704-462A>G c.1704-462A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168792
chrX:71168798	G G	A A	96	a0001c0001t0001g0015 a0001c0001t0001g0108 a0001c0001t0001g0109 others(93): Show a0001c0001t0001g0015 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0131 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0001t0005g0132 a0001c0001t0005g0194 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0003t0001g0182 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155	102	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(99): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1704-456G>A c.1704-456G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168798
chrX:71168812	GAGAAAAA GAGAAAAA	G G	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.1704-440_1704-434d others(9): Show c.1704-440_1704-434delGAAAAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168812
chrX:71168814	GA GA	G G	33	a0001c0001t0001g0179 a0001c0001t0002g0003 a0001c0001t0002g0016 others(30): Show a0001c0001t0001g0179 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0150 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0173 a0001c0001t0002g0175 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0200 a0001c0001t0002g0215 a0001c0001t0002g0229 a0001c0001t0002g0236 a0001c0001t0002g0238 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0003g0099 a0001c0001t0003g0245 a0001c0001t0004g0003 a0001c0001t0004g0241 a0001c0001t0004g0251 a0001c0001t0005g0132 a0001c0010t0002g0157 a0002c0002t0005g0146	36	HG01109.hp1 HG01168.hp2 HG01169.hp1 others(33): Show HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01361.hp2 HG01496.hp1 HG01891.hp2 HG01943.hp1 HG01993.hp1 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02293.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02922.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03486.hp2 HG03540.hp1 HG03669.hp2 NA18906.hp1 NA18970.hp1 NA19043.hp1 NA19056.hp1	intron_variant	MODIFIER	c.1704-430delA c.1704-430delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168814
chrX:71168814	GAA GAA	G G	1	a0001c0003t0001g0137 a0001c0003t0001g0137	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.1704-431_1704-430d others(4): Show c.1704-431_1704-430delAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168814
chrX:71168817	AAAAAAAA others(1): Show AAAAAAAAG	A A	2	a0001c0001t0001g0051 a0001c0001t0001g0057 a0001c0001t0001g0051 a0001c0001t0001g0057	2	HG02735.hp1 NA19084.hp1 HG02735.hp1 NA19084.hp1	intron_variant	MODIFIER	c.1704-433_1704-426d others(10): Show c.1704-433_1704-426delAAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168817
chrX:71168819	AAAAAAG AAAAAAG	A A	1	a0001c0003t0001g0136 a0001c0003t0001g0136	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.1704-431_1704-426d others(8): Show c.1704-431_1704-426delAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168819
chrX:71168820	AAAAAG AAAAAG	A A	2	a0001c0001t0002g0199 a0008c0007t0008g0052 a0001c0001t0002g0199 a0008c0007t0008g0052	2	HG03453.hp1 NA19006.hp1 HG03453.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1704-430_1704-426d others(7): Show c.1704-430_1704-426delAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168820
chrX:71168820	AAAAAGAA others(2): Show AAAAAGAAAG	A A	2	a0001c0001t0001g0109 a0001c0001t0001g0196 a0001c0001t0001g0109 a0001c0001t0001g0196	2	HG02572.hp1 HG03195.hp2 HG02572.hp1 HG03195.hp2	intron_variant	MODIFIER	c.1704-430_1704-422d others(11): Show c.1704-430_1704-422delAGAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168820
chrX:71168820	AAAAAGAA others(6): Show AAAAAGAAAGAAAG	A A	5	a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0005g0111 others(2): Show a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0005g0111 a0001c0001t0005g0112 a0006c0011t0001g0134	5	HG02258.hp1 HG02896.hp1 HG02897.hp2 others(2): Show HG02258.hp1 HG02896.hp1 HG02897.hp2 HG03017.hp1 NA18522.hp1	intron_variant	MODIFIER	c.1704-430_1704-418d others(15): Show c.1704-430_1704-418delAGAAAGAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168820
chrX:71168820	AAAAAGAA others(10): Show AAAAAGAAAGAAAGAAAG	A A	2	a0001c0001t0001g0110 a0001c0001t0001g0212 a0001c0001t0001g0110 a0001c0001t0001g0212	2	HG00738.hp1 HG03209.hp1 HG00738.hp1 HG03209.hp1	intron_variant	MODIFIER	c.1704-430_1704-414d others(19): Show c.1704-430_1704-414delAGAAAGAAAGAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168820
chrX:71168821	A A	AAAAG AAAAG	31	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(28): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0039 a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0098 a0001c0001t0001g0128 a0001c0001t0001g0139 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0176 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0211 a0001c0001t0001g0219 a0001c0001t0001g0240 a0001c0001t0010g0147 a0001c0001t0012g0007 a0002c0002t0001g0210 a0007c0009t0001g0213	38	HG00099.hp1 HG00323.hp2 HG00642.hp1 others(35): Show HG00099.hp1 HG00323.hp2 HG00642.hp1 HG01069.hp1 HG01071.hp2 HG01123.hp2 HG01257.hp1 HG01496.hp2 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01978.hp2 HG02015.hp1 HG02071.hp1 HG02165.hp1 HG02273.hp2 HG02280.hp1 HG03195.hp1 HG03486.hp1 HG03704.hp2 HG03831.hp1 NA18747.hp1 NA18954.hp1 NA18959.hp1 NA18962.hp1 NA18964.hp1 NA18994.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19058.hp1 NA19062.hp1 NA19082.hp1 NA19084.hp2 NA19085.hp1	intron_variant	MODIFIER	c.1704-387_1704-384d others(6): Show c.1704-387_1704-384dupAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAAAGAAA others(1): Show AAAAGAAAG	25	a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0038 others(22): Show a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0075 a0001c0001t0001g0087 a0001c0001t0001g0100 a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0126 a0001c0001t0001g0145 a0001c0001t0001g0149 a0001c0001t0001g0208 a0001c0001t0001g0218 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0005t0001g0117 a0001c0008t0001g0043 a0002c0002t0001g0084 a0002c0002t0001g0092	25	HG00733.hp1 HG00735.hp1 HG01099.hp1 others(22): Show HG00733.hp1 HG00735.hp1 HG01099.hp1 HG01192.hp1 HG01261.hp1 HG01346.hp2 HG01515.hp1 HG02523.hp1 HG02523.hp2 HG02683.hp1 HG02683.hp2 HG02738.hp1 HG02976.hp1 HG03492.hp1 HG04184.hp1 NA18947.hp1 NA18965.hp1 NA18983.hp1 NA18991.hp2 NA19005.hp1 NA19007.hp1 NA19067.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp1	intron_variant	MODIFIER	c.1704-391_1704-384d others(10): Show c.1704-391_1704-384dupAAGAAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAAAGAAA others(5): Show AAAAGAAAGAAAG	12	a0001c0001t0001g0014 a0001c0001t0001g0025 a0001c0001t0001g0027 others(9): Show a0001c0001t0001g0014 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0119 a0001c0001t0001g0125 a0001c0001t0001g0148 a0001c0001t0001g0192 a0001c0001t0001g0207 a0001c0001t0001g0250	13	HG00639.hp1 HG01070.hp1 HG01071.hp1 others(10): Show HG00639.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG02622.hp2 HG02818.hp2 HG03669.hp1 NA18984.hp1 NA19065.hp1 NA19065.hp2 NA19079.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1704-395_1704-384d others(14): Show c.1704-395_1704-384dupAAGAAAGAAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAAG AAAG	28	a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0002g0058 others(25): Show a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0002g0058 a0001c0001t0002g0130 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0171 a0001c0001t0002g0174 a0001c0001t0002g0189 a0001c0001t0002g0197 a0001c0001t0002g0202 a0001c0001t0002g0204 a0001c0001t0002g0216 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0230 a0001c0001t0002g0237 a0001c0001t0002g0252 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0246 a0001c0001t0004g0018 a0001c0001t0004g0242 a0003c0004t0002g0155	29	HG00673.hp1 HG00735.hp2 HG01081.hp1 others(26): Show HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01934.hp1 HG01952.hp1 HG01993.hp2 HG02280.hp2 HG02300.hp1 HG02622.hp1 HG02886.hp1 HG02896.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03516.hp1 HG03831.hp2 HG03834.hp1 HG06807.hp1 NA18945.hp1 NA18953.hp1 NA19030.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.1704-431_1704-430i others(5): Show c.1704-431_1704-430insGAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAAGAAAG AAAGAAAG	6	a0001c0001t0001g0015 a0001c0001t0002g0198 a0001c0001t0002g0205 others(3): Show a0001c0001t0001g0015 a0001c0001t0002g0198 a0001c0001t0002g0205 a0001c0001t0002g0217 a0001c0001t0002g0228 a0001c0001t0003g0019	8	HG01167.hp1 HG01169.hp2 HG01884.hp1 others(5): Show HG01167.hp1 HG01169.hp2 HG01884.hp1 HG01975.hp2 HG02922.hp2 HG02970.hp1 HG03471.hp1 HG04115.hp1	intron_variant	MODIFIER	c.1704-431_1704-430i others(9): Show c.1704-431_1704-430insGAAAGAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	3	a0001c0001t0002g0140 a0001c0001t0002g0172 a0001c0001t0005g0194 a0001c0001t0002g0140 a0001c0001t0002g0172 a0001c0001t0005g0194	3	HG01243.hp1 HG02109.hp2 HG02486.hp1 HG01243.hp1 HG02109.hp2 HG02486.hp1	intron_variant	MODIFIER	c.1704-431_1704-430i others(13): Show c.1704-431_1704-430insGAAAGAAAGAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAGAAAG AAGAAAG	4	a0001c0001t0001g0131 a0001c0001t0002g0153 a0001c0001t0002g0190 others(1): Show a0001c0001t0001g0131 a0001c0001t0002g0153 a0001c0001t0002g0190 a0001c0003t0001g0129	4	HG01123.hp1 HG02451.hp2 HG02559.hp2 others(1): Show HG01123.hp1 HG02451.hp2 HG02559.hp2 NA18906.hp2	intron_variant	MODIFIER	c.1704-432_1704-431i others(8): Show c.1704-432_1704-431insGAAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAGAAAGA others(3): Show AAGAAAGAAAG	2	a0001c0001t0002g0203 a0001c0003t0001g0182 a0001c0001t0002g0203 a0001c0003t0001g0182	2	HG03516.hp2 HG06807.hp2 HG03516.hp2 HG06807.hp2	intron_variant	MODIFIER	c.1704-432_1704-431i others(12): Show c.1704-432_1704-431insGAAAGAAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AAGAAAGA others(11): Show AAGAAAGAAAGAAAGAAAG	1	a0001c0001t0002g0184 a0001c0001t0002g0184	1	HG02895.hp1 HG02895.hp1	intron_variant	MODIFIER	c.1704-432_1704-431i others(20): Show c.1704-432_1704-431insGAAAGAAAGAAAGAAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	A A	AG AG	1	a0001c0001t0002g0181 a0001c0001t0002g0181	1	NA20300.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1704-433_1704-432i others(3): Show c.1704-433_1704-432insG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168821
chrX:71168821	A A	AGAAAGAA others(6): Show AGAAAGAAAGAAAG	1	a0001c0001t0002g0185 a0001c0001t0002g0185	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.1704-433_1704-432i others(15): Show c.1704-433_1704-432insGAAAGAAAGAAAG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168821
chrX:71168821	A A	G G	5	a0001c0001t0002g0135 a0001c0001t0002g0235 a0001c0001t0003g0247 others(2): Show a0001c0001t0002g0135 a0001c0001t0002g0235 a0001c0001t0003g0247 a0001c0001t0003g0248 a0001c0001t0003g0249	5	HG01978.hp1 HG02145.hp1 HG02723.hp2 others(2): Show HG01978.hp1 HG02145.hp1 HG02723.hp2 HG03041.hp2 HG03453.hp2	intron_variant	MODIFIER	c.1704-433A>G c.1704-433A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168821
chrX:71168821	AAAAG AAAAG	A A	33	a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0017 others(30): Show a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0082 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0097 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0120 a0001c0001t0001g0142 a0001c0001t0001g0234 a0001c0001t0006g0028 a0001c0001t0006g0195 a0001c0001t0009g0095 a0004c0006t0001g0009	37	HG00140.hp1 HG00323.hp1 HG00609.hp1 others(34): Show HG00140.hp1 HG00323.hp1 HG00609.hp1 HG00621.hp1 HG01081.hp2 HG01175.hp2 HG01975.hp1 HG02027.hp1 HG02040.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02257.hp2 HG02602.hp1 HG02698.hp1 HG02965.hp1 HG03239.hp1 HG03490.hp1 HG03654.hp1 HG03704.hp1 HG04184.hp2 HG04199.hp1 NA18941.hp1 NA18941.hp2 NA18944.hp1 NA18951.hp1 NA18961.hp1 NA18966.hp1 NA18971.hp1 NA18977.hp1 NA18979.hp1 NA19004.hp1 NA19012.hp1 NA19063.hp1 NA19068.hp1 NA20905.hp1 NA21309.hp1	intron_variant	MODIFIER	c.1704-387_1704-384d others(6): Show c.1704-387_1704-384delAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	AAAAGAAA others(1): Show AAAAGAAAG	A A	4	a0001c0001t0001g0030 a0001c0001t0001g0055 a0001c0001t0001g0167 others(1): Show a0001c0001t0001g0030 a0001c0001t0001g0055 a0001c0001t0001g0167 a0001c0001t0001g0209	4	HG02056.hp1 HG02818.hp1 NA18943.hp1 others(1): Show HG02056.hp1 HG02818.hp1 NA18943.hp1 NA18960.hp1	intron_variant	MODIFIER	c.1704-391_1704-384d others(10): Show c.1704-391_1704-384delAAGAAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168821	AAAAGAAA others(13): Show AAAAGAAAGAAAGAAAGAAAG	A A	1	a0001c0001t0002g0201 a0001c0001t0002g0201	1	NA18999.hp2 NA18999.hp2	intron_variant	MODIFIER	c.1704-403_1704-384d others(22): Show c.1704-403_1704-384delAAGAAAGAAAGAAAGAAAGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168821
chrX:71168822	A A	AG AG	1	a0001c0001t0002g0239 a0001c0001t0002g0239	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.1704-432_1704-431i others(3): Show c.1704-432_1704-431insG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168822
chrX:71168822	AAAG AAAG	A A	2	a0001c0001t0001g0081 a0001c0001t0001g0231 a0001c0001t0001g0081 a0001c0001t0001g0231	2	HG00741.hp2 HG04204.hp1 HG00741.hp2 HG04204.hp1	intron_variant	MODIFIER	c.1704-429_1704-427d others(5): Show c.1704-429_1704-427delGAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168822
chrX:71168823	A A	G G	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.1704-431A>G c.1704-431A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168823
chrX:71168823	AAG AAG	A A	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.1704-429_1704-428d others(4): Show c.1704-429_1704-428delGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168823
chrX:71168826	A A	G G	1	a0002c0002t0001g0214 a0002c0002t0001g0214	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.1704-428A>G c.1704-428A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168826
chrX:71168828	AGAAAGAA others(6): Show AGAAAGAAAGAAAG	A A	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.1704-425_1704-413d others(15): Show c.1704-425_1704-413delGAAAGAAAGAAAG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168828
chrX:71168839	AAG AAG	A A	1	a0001c0001t0002g0158 a0001c0001t0002g0158	1	HG02922.hp1 HG02922.hp1	intron_variant	MODIFIER	c.1704-413_1704-412d others(4): Show c.1704-413_1704-412delGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168839
chrX:71168841	GA GA	G G	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1704-410delA c.1704-410delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168841
chrX:71168845	G G	A A	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.1704-409G>A c.1704-409G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168845
chrX:71168855	AAG AAG	A A	5	a0001c0001t0001g0010 a0001c0001t0001g0048 a0001c0001t0001g0072 others(2): Show a0001c0001t0001g0010 a0001c0001t0001g0048 a0001c0001t0001g0072 a0001c0001t0001g0083 a0001c0001t0001g0101	6	NA18940.hp1 NA18955.hp1 NA18967.hp1 others(3): Show NA18940.hp1 NA18955.hp1 NA18967.hp1 NA18989.hp1 NA18991.hp1 NA19060.hp1	intron_variant	MODIFIER	c.1704-397_1704-396d others(4): Show c.1704-397_1704-396delGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168855
chrX:71168856	AGAAAGAA others(21): Show AGAAAGAAAGAAAGAGAAAGAAAAGAAAG	A A	1	a0001c0001t0005g0132 a0001c0001t0005g0132	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.1704-397_1704-370d others(30): Show c.1704-397_1704-370delGAAAGAAAGAAAGAGAAAGAAAAGAAAG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168856
chrX:71168859	AAGAAAGA others(3): Show AAGAAAGAAAG	A A	1	a0001c0001t0003g0163 a0001c0001t0003g0163	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1704-385_1704-376d others(12): Show c.1704-385_1704-376delGAGAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168859
chrX:71168867	AAG AAG	A A	18	a0001c0001t0001g0179 a0001c0001t0002g0107 a0001c0001t0002g0158 others(15): Show a0001c0001t0001g0179 a0001c0001t0002g0107 a0001c0001t0002g0158 a0001c0001t0002g0170 a0001c0001t0002g0173 a0001c0001t0002g0177 a0001c0001t0002g0180 a0001c0001t0002g0186 a0001c0001t0002g0199 a0001c0001t0002g0215 a0001c0001t0002g0235 a0001c0001t0002g0238 a0001c0001t0004g0241 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0003t0001g0136 a0001c0003t0001g0137 a0002c0002t0005g0146	18	HG01256.hp1 HG01891.hp2 HG01978.hp1 others(15): Show HG01256.hp1 HG01891.hp2 HG01978.hp1 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02258.hp1 HG02293.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02717.hp1 HG02809.hp2 HG02922.hp1 HG03453.hp1 HG03486.hp2 HG03540.hp1 NA18522.hp1	intron_variant	MODIFIER	c.1704-383_1704-382d others(4): Show c.1704-383_1704-382delGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168867
chrX:71168869	G G	GA GA	1	a0001c0001t0001g0096 a0001c0001t0001g0096	1	NA19010.hp1 NA19010.hp1	intron_variant	MODIFIER	c.1704-384dupA c.1704-384dupA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168869
chrX:71168869	G G	GAA GAA	66	a0001c0001t0001g0015 a0001c0001t0001g0131 a0001c0001t0001g0191 others(63): Show a0001c0001t0001g0015 a0001c0001t0001g0131 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0058 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0140 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0156 a0001c0001t0002g0162 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0178 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0237 a0001c0001t0002g0239 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0248 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0242 a0001c0001t0004g0251 a0001c0001t0005g0194 a0001c0003t0001g0129 a0001c0003t0001g0182 a0001c0010t0002g0157 a0003c0004t0002g0155	72	HG00639.hp2 HG00673.hp1 HG00735.hp2 others(69): Show HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG01993.hp2 HG02109.hp2 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02622.hp1 HG02647.hp1 HG02723.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03239.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1704-384_1704-383i others(4): Show c.1704-384_1704-383insAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168869
chrX:71168869	G G	GAAAGAA GAAAGAA	2	a0001c0001t0002g0135 a0001c0001t0003g0249 a0001c0001t0002g0135 a0001c0001t0003g0249	2	HG02723.hp2 HG03041.hp2 HG02723.hp2 HG03041.hp2	intron_variant	MODIFIER	c.1704-384_1704-383i others(8): Show c.1704-384_1704-383insAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168869
chrX:71168869	G G	GAAAGAAA others(3): Show GAAAGAAAGAA	2	a0001c0001t0002g0154 a0001c0001t0003g0247 a0001c0001t0002g0154 a0001c0001t0003g0247	2	HG02970.hp2 HG03453.hp2 HG02970.hp2 HG03453.hp2	intron_variant	MODIFIER	c.1704-384_1704-383i others(12): Show c.1704-384_1704-383insAAGAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168869
chrX:71168869	GAGAA GAGAA	G G	4	a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 others(1): Show a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0196	4	HG02572.hp1 HG02897.hp2 HG03195.hp2 others(1): Show HG02572.hp1 HG02897.hp2 HG03195.hp2 HG03209.hp1	intron_variant	MODIFIER	c.1704-379_1704-376d others(6): Show c.1704-379_1704-376delGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168869
chrX:71168869	GAGAAAGA others(5): Show GAGAAAGAAAAGA	G G	1	a0001c0001t0002g0236 a0001c0001t0002g0236	1	HG01943.hp1 HG01943.hp1	intron_variant	MODIFIER	c.1704-383_1704-372d others(14): Show c.1704-383_1704-372delGAAAGAAAAGAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168869
chrX:71168870	AG AG	A A	1	a0001c0001t0002g0168 a0001c0001t0002g0168	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.1704-383delG c.1704-383delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168870
chrX:71168871	GAAA GAAA	G G	1	a0001c0001t0001g0108 a0001c0001t0001g0108	1	HG02896.hp1 HG02896.hp1	intron_variant	MODIFIER	c.1704-382_1704-380d others(5): Show c.1704-382_1704-380delAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168871
chrX:71168873	A A	AG AG	1	a0001c0001t0001g0096 a0001c0001t0001g0096	1	NA19010.hp1 NA19010.hp1	intron_variant	MODIFIER	c.1704-381_1704-380i others(3): Show c.1704-381_1704-380insG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168873
chrX:71168875	GA GA	G G	20	a0001c0001t0001g0193 a0001c0001t0002g0003 a0001c0001t0002g0058 others(17): Show a0001c0001t0001g0193 a0001c0001t0002g0003 a0001c0001t0002g0058 a0001c0001t0002g0162 a0001c0001t0002g0168 a0001c0001t0002g0175 a0001c0001t0002g0202 a0001c0001t0002g0215 a0001c0001t0002g0225 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0251	23	HG00673.hp1 HG01109.hp1 HG01168.hp2 others(20): Show HG00673.hp1 HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01361.hp2 HG01496.hp1 HG01952.hp1 HG01978.hp1 HG01993.hp2 HG02080.hp1 HG02165.hp2 HG02273.hp1 HG02293.hp2 HG03225.hp1 HG03239.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19030.hp1 NA19056.hp1 NA19083.hp1 NA19240.hp1	intron_variant	MODIFIER	c.1704-375delA c.1704-375delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168875
chrX:71168876	A A	AAAG AAAG	14	a0001c0001t0001g0191 a0001c0001t0002g0171 a0001c0001t0002g0181 others(11): Show a0001c0001t0001g0191 a0001c0001t0002g0171 a0001c0001t0002g0181 a0001c0001t0002g0204 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0239 a0001c0001t0003g0248 a0001c0001t0004g0242 a0001c0003t0001g0182	14	HG00639.hp2 HG01081.hp1 HG01257.hp2 others(11): Show HG00639.hp2 HG01081.hp1 HG01257.hp2 HG01258.hp1 HG01934.hp1 HG01975.hp2 HG02145.hp1 HG02300.hp1 HG03130.hp1 HG04115.hp1 HG06807.hp2 NA19076.hp1 NA19240.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1704-376_1704-375i others(5): Show c.1704-376_1704-375insGAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168876
chrX:71168879	A A	G G	2	a0001c0001t0002g0140 a0001c0001t0005g0194 a0001c0001t0002g0140 a0001c0001t0005g0194	2	HG02109.hp2 HG02486.hp1 HG02109.hp2 HG02486.hp1	intron_variant	MODIFIER	c.1704-375A>G c.1704-375A>G	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168879
chrX:71168882	AAG AAG	A A	57	a0001c0001t0001g0015 a0001c0001t0001g0108 a0001c0001t0001g0109 others(54): Show a0001c0001t0001g0015 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0131 a0001c0001t0001g0179 a0001c0001t0001g0196 a0001c0001t0002g0016 a0001c0001t0002g0107 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0135 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0203 a0001c0001t0002g0205 a0001c0001t0002g0252 a0001c0001t0003g0019 a0001c0001t0003g0099 a0001c0001t0003g0163 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0247 a0001c0001t0003g0249 a0001c0001t0005g0111 a0001c0001t0005g0112 a0001c0003t0001g0129 a0001c0003t0001g0136 a0001c0003t0001g0137 a0001c0010t0002g0157 a0002c0002t0005g0146 a0003c0004t0002g0155	60	HG00735.hp2 HG01123.hp1 HG01167.hp1 others(57): Show HG00735.hp2 HG01123.hp1 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01884.hp1 HG01891.hp2 HG01993.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03669.hp2 HG03831.hp2 HG03834.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA19043.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1704-368_1704-367d others(4): Show c.1704-368_1704-367delGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168882
chrX:71168883	AG AG	A A	22	a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0002g0003 others(19): Show a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0002g0003 a0001c0001t0002g0058 a0001c0001t0002g0162 a0001c0001t0002g0175 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0004g0003 a0001c0001t0004g0018 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0251	25	HG00673.hp1 HG01109.hp1 HG01168.hp2 others(22): Show HG00673.hp1 HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01256.hp1 HG01361.hp2 HG01496.hp1 HG01934.hp1 HG01952.hp1 HG01978.hp1 HG01993.hp2 HG02080.hp1 HG02165.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG03130.hp1 HG03239.hp2 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA19030.hp1 NA19056.hp1 NA19076.hp1 NA19083.hp1	intron_variant	MODIFIER	c.1704-370delG c.1704-370delG	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168883
chrX:71168884	G G	A A	1	a0001c0001t0002g0236 a0001c0001t0002g0236	1	HG01943.hp1 HG01943.hp1	intron_variant	MODIFIER	c.1704-370G>A c.1704-370G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168884
chrX:71168884	G G	GAA GAA	3	a0001c0001t0002g0140 a0001c0001t0002g0202 a0001c0001t0005g0194 a0001c0001t0002g0140 a0001c0001t0002g0202 a0001c0001t0005g0194	3	HG02109.hp2 HG02486.hp1 NA19240.hp1 HG02109.hp2 HG02486.hp1 NA19240.hp1	intron_variant	MODIFIER	c.1704-369_1704-368i others(4): Show c.1704-369_1704-368insAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168884
chrX:71168884	G G	GAAA GAAA	5	a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0227 others(2): Show a0001c0001t0002g0217 a0001c0001t0002g0224 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0239	5	HG00639.hp2 HG01257.hp2 HG01258.hp1 others(2): Show HG00639.hp2 HG01257.hp2 HG01258.hp1 HG01975.hp2 HG04115.hp1	intron_variant	MODIFIER	c.1704-369_1704-368i others(5): Show c.1704-369_1704-368insAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168884
chrX:71168884	G G	GAAAAGAA GAAAAGAA	5	a0001c0001t0002g0171 a0001c0001t0002g0181 a0001c0001t0002g0204 others(2): Show a0001c0001t0002g0171 a0001c0001t0002g0181 a0001c0001t0002g0204 a0001c0001t0003g0248 a0001c0003t0001g0182	5	HG01081.hp1 HG02145.hp1 HG06807.hp2 others(2): Show HG01081.hp1 HG02145.hp1 HG06807.hp2 NA19240.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1704-369_1704-368i others(9): Show c.1704-369_1704-368insAAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168884
chrX:71168884	G G	GAAAGAA GAAAGAA	3	a0001c0001t0002g0152 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0152 a0001c0001t0002g0184 a0001c0001t0002g0185	3	HG02895.hp1 HG02897.hp1 HG03516.hp1 HG02895.hp1 HG02897.hp1 HG03516.hp1	intron_variant	MODIFIER	c.1704-369_1704-368i others(8): Show c.1704-369_1704-368insAAGAAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168884
chrX:71168896	AAG AAG	A A	8	a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 others(5): Show a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0179 a0001c0001t0001g0196 a0001c0001t0005g0111 a0001c0001t0005g0112	8	HG02055.hp1 HG02258.hp1 HG02572.hp1 others(5): Show HG02055.hp1 HG02258.hp1 HG02572.hp1 HG02896.hp1 HG02897.hp2 HG03195.hp2 HG03209.hp1 NA18522.hp1	intron_variant	MODIFIER	c.1704-356_1704-355d others(4): Show c.1704-356_1704-355delGA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168896
chrX:71168898	G G	A A	3	a0001c0001t0002g0152 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0152 a0001c0001t0002g0184 a0001c0001t0002g0185	3	HG02895.hp1 HG02897.hp1 HG03516.hp1 HG02895.hp1 HG02897.hp1 HG03516.hp1	intron_variant	MODIFIER	c.1704-356G>A c.1704-356G>A	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7		chrX	71168898
chrX:71168898	G G	GAA GAA	3	a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0005g0132 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0005g0132	3	HG02886.hp2 HG03130.hp1 NA19030.hp1 HG02886.hp2 HG03130.hp1 NA19030.hp1	intron_variant	MODIFIER	c.1704-354_1704-353d others(4): Show c.1704-354_1704-353dupAA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71168898
chrX:71169025	GA GA	G G	1	a0008c0007t0008g0052 a0008c0007t0008g0052	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1704-224delA c.1704-224delA	NLGN3	ENSG00000196338.15	transcript	ENST00000358741.4	protein_coding	7/7	INFO_REALIGN_3_PRIME	chrX	71169025

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JoGo Online Haplotype Explorer NLGN3_chrX_71139841_71176201

JoGo Local Haplotype Explorer (on iGV) NLGN3_chrX_71139841_71176201

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 8)

CCoding Level Haplotype Info (Total: 12)

TTranscript Level Haplotype Info (Total: 13)

GGenebody Level Haplotype Info (Total: 252)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 12)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 24)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 257)

Haplotype Details by Sample (Haploid Level) (Total: 278)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 13)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (Exon) (Total: 16)

GGenebody Level Haplotype Variants (Intron) (Total: 339)

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Annotation (Repeats)

Annotation (SNP Array)