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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   H2AB2_chrX_155375709_155386299  H2AB2_chrX_155375709_155386299 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 474381
ensemblid ENSG00000277858.2
hgncid 18298
symbol H2AB2
name H2A.B variant histone 2
refseq_nuc NM_001017991.3
refseq_prot NP_001017991.1
ensembl_nuc ENST00000354514.6
ensembl_prot ENSP00000346509.5
mane_status MANE Select
chr chrX
start 155380709
end 155381299
strand +
ver v1.2
region chrX:155380709-155381299
region5000 chrX:155375709-155386299
regionname0 H2AB2_chrX_155380709_155381299
regionname5000 H2AB2_chrX_155375709_155386299

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 0/0 115 201 65 43 66 8 19 48 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0002 0/0 115 21 1 4 11 1 4 9 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0003 0/0 115 3 3 0 0 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0004 0/0 115 2 0 0 0 0 2 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0005 0/0 31 1 0 0 1 0 0 1 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0006 0/0 115 1 0 1 0 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299

chapid grch38/
chm13v2 		clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/0 348 201 65 43 66 8 19 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
c0002 0/0 348 21 1 4 11 1 4 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
c0003 0/0 348 3 3 0 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
c0004 0/0 348 2 0 0 0 0 2 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
c0005 0/0 348 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
c0006 0/0 348 1 0 1 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 244 226 69 48 75 9 25 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
t0002 0/0 244 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
t0003 0/0 245 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
t0004 0/0 246 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0000 0/0 229 69 48 78 9 25 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299

achapid grch38/
chm13v2 		clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/0 348 201 65 43 66 8 19 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0002c0002 0/0 348 21 1 4 11 1 4 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0003c0003 0/0 348 3 3 0 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0004c0004 0/0 348 2 0 0 0 0 2 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0005c0005 0/0 348 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0006c0006 0/0 348 1 0 1 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 591 199 65 43 64 8 19 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0001c0001t0002 0/0 591 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0001c0001t0003 0/0 592 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0002c0002t0001 0/0 591 21 1 4 11 1 4 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0003c0003t0001 0/0 591 3 3 0 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0004c0004t0001 0/0 591 2 0 0 0 0 2 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0005c0005t0004 0/0 593 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299
a0006c0006t0001 0/0 591 1 0 1 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 copy fasta chrX 155375709 155386299

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0000 0/0 199 65 43 64 8 19 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
a0001c0001t0002g0000 0/0 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
a0001c0001t0003g0000 0/0 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
a0002c0002t0001g0000 0/0 21 1 4 11 1 4 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
a0003c0003t0001g0000 0/0 3 3 0 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
a0004c0004t0001g0000 0/0 2 0 0 0 0 2 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
a0005c0005t0004g0000 0/0 1 0 0 1 0 0 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
a0006c0006t0001g0000 0/0 1 0 1 0 0 0 H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0001 g0000 EUR GBR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00099 hp2 a0002 c0002 t0001 g0000 EUR GBR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00140 hp1 a0001 c0001 t0001 g0000 EUR GBR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00280 hp1 a0001 c0001 t0001 g0000 EUR FIN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00323 hp1 a0001 c0001 t0001 g0000 EUR FIN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00323 hp2 a0001 c0001 t0001 g0000 EUR FIN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00423 hp1 a0001 c0001 t0001 g0000 EAS CHS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00423 hp2 a0001 c0001 t0001 g0000 EAS CHS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00544 hp1 a0001 c0001 t0001 g0000 EAS CHS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00544 hp2 a0002 c0002 t0001 g0000 EAS CHS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00609 hp1 a0001 c0001 t0001 g0000 EAS CHS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00621 hp1 a0001 c0001 t0001 g0000 EAS CHS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00639 hp1 a0002 c0002 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00639 hp2 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00642 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00673 hp1 a0001 c0001 t0001 g0000 EAS CHS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00733 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00733 hp2 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00735 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00735 hp2 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00738 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00741 hp1 a0002 c0002 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG00741 hp2 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01069 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01071 hp1 a0002 c0002 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01071 hp2 a0002 c0002 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01074 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01099 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01106 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01109 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01167 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01192 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01243 hp1 a0001 c0001 t0001 g0000 AMR PUR H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01255 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01257 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01257 hp2 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01258 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01261 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01346 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01346 hp2 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01358 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01361 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01361 hp2 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01433 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01496 hp1 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01496 hp2 a0001 c0001 t0001 g0000 AMR CLM H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01515 hp1 a0001 c0001 t0001 g0000 EUR IBS H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01891 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01891 hp2 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01928 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01934 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01943 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01952 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01975 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01975 hp2 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01978 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01978 hp2 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01993 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG01993 hp2 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02004 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02004 hp2 a0006 c0006 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02027 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02040 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02055 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02056 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02071 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02074 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02080 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02080 hp2 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02129 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02132 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02135 hp1 a0001 c0001 t0001 g0000 EAS KHV H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02145 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02165 hp1 a0001 c0001 t0001 g0000 EAS CDX H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02165 hp2 a0001 c0001 t0001 g0000 EAS CDX H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02258 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02273 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02273 hp2 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02300 hp1 a0001 c0001 t0001 g0000 AMR PEL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02451 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02451 hp2 a0003 c0003 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02572 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02602 hp1 a0002 c0002 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02615 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02615 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02622 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02622 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02630 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02630 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02647 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02683 hp1 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02683 hp2 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02698 hp1 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02717 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02723 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02723 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02809 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02809 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02818 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02818 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02886 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02886 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02897 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02897 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02922 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02922 hp2 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02965 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02970 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02970 hp2 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02976 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02976 hp2 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03041 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03041 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03098 hp1 a0001 c0001 t0001 g0000 AFR MSL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03130 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03139 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03195 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03195 hp2 a0003 c0003 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03209 hp1 a0001 c0001 t0001 g0000 AFR MSL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03225 hp1 a0001 c0001 t0001 g0000 AFR MSL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03486 hp1 a0001 c0001 t0001 g0000 AFR MSL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03486 hp2 a0001 c0001 t0001 g0000 AFR MSL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03490 hp1 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03492 hp1 a0002 c0002 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03516 hp1 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03516 hp2 a0001 c0001 t0001 g0000 AFR ESN H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03540 hp1 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03540 hp2 a0001 c0001 t0001 g0000 AFR GWD H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03579 hp1 a0003 c0003 t0001 g0000 AFR MSL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03654 hp1 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03669 hp1 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03669 hp2 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03688 hp1 a0002 c0002 t0001 g0000 SAS STU H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03704 hp1 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03704 hp2 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03710 hp1 a0001 c0001 t0001 g0000 SAS PJL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03831 hp1 a0004 c0004 t0001 g0000 SAS BEB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03831 hp2 a0002 c0002 t0001 g0000 SAS BEB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03834 hp1 a0001 c0001 t0001 g0000 SAS BEB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03834 hp2 a0001 c0001 t0001 g0000 SAS BEB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03927 hp1 a0001 c0001 t0001 g0000 SAS BEB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03927 hp2 a0004 c0004 t0001 g0000 SAS BEB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03942 hp1 a0001 c0001 t0001 g0000 SAS BEB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG04115 hp1 a0001 c0001 t0001 g0000 SAS STU H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG04199 hp1 a0001 c0001 t0001 g0000 SAS STU H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG04204 hp1 a0001 c0001 t0001 g0000 SAS STU H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG04228 hp1 a0001 c0001 t0001 g0000 SAS STU H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18522 hp1 a0001 c0001 t0001 g0000 AFR YRI H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18612 hp1 a0002 c0002 t0001 g0000 EAS CHB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18906 hp1 a0001 c0001 t0001 g0000 AFR YRI H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18906 hp2 a0001 c0001 t0001 g0000 AFR YRI H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18940 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18941 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18941 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18942 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18942 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18945 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18947 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18947 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18950 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18950 hp2 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18952 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18959 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18960 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18965 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18966 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18967 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18971 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18973 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18973 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18975 hp1 a0005 c0005 t0004 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18975 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18977 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18979 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18979 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18982 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18983 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18986 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18990 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18995 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19000 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19004 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19005 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19007 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19012 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19030 hp1 a0001 c0001 t0001 g0000 AFR LWK H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19030 hp2 a0001 c0001 t0001 g0000 AFR LWK H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19043 hp1 a0001 c0001 t0001 g0000 AFR LWK H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19055 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19060 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19063 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19064 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19064 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19065 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19065 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19070 hp1 a0002 c0002 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19074 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19074 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19076 hp1 a0001 c0001 t0002 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19079 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19080 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19080 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19082 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19083 hp1 a0001 c0001 t0003 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19084 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19084 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19085 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19088 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19089 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19090 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19090 hp2 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19240 hp1 a0001 c0001 t0001 g0000 AFR YRI H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA19240 hp2 a0001 c0001 t0001 g0000 AFR YRI H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA20752 hp1 a0001 c0001 t0001 g0000 EUR TSI H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA20805 hp1 a0001 c0001 t0001 g0000 EUR TSI H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA20905 hp1 a0001 c0001 t0001 g0000 SAS GIH H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02109 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02109 hp2 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02486 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02559 hp1 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG02559 hp2 a0001 c0001 t0001 g0000 AFR ACB H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG03471 hp1 a0001 c0001 t0001 g0000 AFR MSL H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG06807 hp1 a0002 c0002 t0001 g0000 AFR USA H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
HG06807 hp2 a0001 c0001 t0001 g0000 AFR USA H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA18955 hp1 a0001 c0001 t0001 g0000 EAS JPT H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA20300 hp1 a0001 c0001 t0001 g0000 AFR USA H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA20300 hp2 a0001 c0001 t0001 g0000 AFR USA H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA21309 hp1 a0001 c0001 t0001 g0000 AFR LWK H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299
NA21309 hp2 a0001 c0001 t0001 g0000 AFR LWK H2AB2_chrX_155375709_155386299 H2AB2 chrX 155375709 155386299

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:155380838
C
C
 T
T
 1 a0006
a0006
 1 HG02004.hp2
HG02004.hp2
 missense_variant MODERATE c.52C>T
c.52C>T
 p.Arg18Trp
p.Arg18Trp
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 130/591 52/348 18/115 chrX 155380838
chrX:155380873
GT
GT
 G
G
 1 a0005
a0005
 1 NA18975.hp1
NA18975.hp1
 frameshift_variant HIGH c.91delT
c.91delT
 p.Ser31fs
p.Ser31fs
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 169/591 91/348 31/115 INFO_REALIGN_3_PRIME chrX 155380873
chrX:155380877
T
T
 C
C
 1 a0004
a0004
 2 HG03831.hp1
HG03927.hp2
HG03831.hp1
HG03927.hp2
 missense_variant MODERATE c.91T>C
c.91T>C
 p.Ser31Pro
p.Ser31Pro
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 169/591 91/348 31/115 chrX 155380877
chrX:155380938
C
C
 CG
CG
 1 a0005
a0005
 1 NA18975.hp1
NA18975.hp1
 frameshift_variant HIGH c.154dupG
c.154dupG
 p.Ala52fs
p.Ala52fs
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 233/591 155/348 52/115 INFO_REALIGN_3_PRIME chrX 155380938
chrX:155380989
T
T
 C
C
 1 a0002
a0002
 21 HG00099.hp2
HG00544.hp2
HG00639.hp1
others(18): Show 
HG00099.hp2
HG00544.hp2
HG00639.hp1
HG00741.hp1
HG01071.hp1
HG01071.hp2
HG02602.hp1
HG03492.hp1
HG03688.hp1
HG03831.hp2
HG06807.hp1
NA18612.hp1
NA18941.hp1
NA18950.hp2
NA18952.hp1
NA18973.hp1
NA19000.hp1
NA19007.hp1
NA19012.hp1
NA19065.hp1
NA19070.hp1
 missense_variant MODERATE c.203T>C
c.203T>C
 p.Leu68Pro
p.Leu68Pro
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 281/591 203/348 68/115 chrX 155380989
chrX:155381049
T
T
 TG
TG
 1 a0005
a0005
 1 NA18975.hp1
NA18975.hp1
 frameshift_variant HIGH c.265dupG
c.265dupG
 p.Asp89fs
p.Asp89fs
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 344/591 266/348 89/115 INFO_REALIGN_3_PRIME chrX 155381049
chrX:155381065
CA
CA
 C
C
 1 a0005
a0005
 1 NA18975.hp1
NA18975.hp1
 frameshift_variant HIGH c.281delA
c.281delA
 p.Asn94fs
p.Asn94fs
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 359/591 281/348 94/115 INFO_REALIGN_3_PRIME chrX 155381065
chrX:155381091
T
T
 G
G
 1 a0003
a0003
 3 HG02451.hp2
HG03195.hp2
HG03579.hp1
HG02451.hp2
HG03195.hp2
HG03579.hp1
 missense_variant MODERATE c.305T>G
c.305T>G
 p.Phe102Cys
p.Phe102Cys
 H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 383/591 305/348 102/115 chrX 155381091

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:155381179
C
C
 CG
CG
 1 a0005c0005t0004
a0005c0005t0004
 1 NA18975.hp1
NA18975.hp1
 3_prime_UTR_variant MODIFIER c.*45_*46insG
c.*45_*46insG
H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 46 chrX 155381179
chrX:155381195
T
T
 TC
TC
 1 a0001c0001t0002
a0001c0001t0002
 1 NA19076.hp1
NA19076.hp1
 3_prime_UTR_variant MODIFIER c.*66dupC
c.*66dupC
H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 67 INFO_REALIGN_3_PRIME chrX 155381195
chrX:155381228
T
T
 C
C
 1 a0005c0005t0004
a0005c0005t0004
 1 NA18975.hp1
NA18975.hp1
 3_prime_UTR_variant MODIFIER c.*94T>C
c.*94T>C
H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 94 chrX 155381228
chrX:155381228
TC
TC
 T
T
 1 a0001c0001t0002
a0001c0001t0002
 1 NA19076.hp1
NA19076.hp1
 3_prime_UTR_variant MODIFIER c.*100delC
c.*100delC
H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 100 INFO_REALIGN_3_PRIME chrX 155381228
chrX:155381229
C
C
 T
T
 1 a0005c0005t0004
a0005c0005t0004
 1 NA18975.hp1
NA18975.hp1
 3_prime_UTR_variant MODIFIER c.*95C>T
c.*95C>T
H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 95 chrX 155381229
chrX:155381231
C
C
 CA
CA
 1 a0001c0001t0003
a0001c0001t0003
 1 NA19083.hp1
NA19083.hp1
 3_prime_UTR_variant MODIFIER c.*97_*98insA
c.*97_*98insA
H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 98 chrX 155381231
chrX:155381289
C
C
 CA
CA
 1 a0005c0005t0004
a0005c0005t0004
 1 NA18975.hp1
NA18975.hp1
 3_prime_UTR_variant MODIFIER c.*157dupA
c.*157dupA
H2AB2 ENSG00000277858.2 transcript ENST00000354514.6 protein_coding 1/1 158 INFO_REALIGN_3_PRIME chrX 155381289

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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