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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   ZFY_chrY_2930381_2987506  ZFY_chrY_2930381_2987506 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 7544
ensemblid ENSG00000067646.12
hgncid 12870
symbol ZFY
name zinc finger protein Y-linked
refseq_nuc NM_003411.4
refseq_prot NP_003402.2
ensembl_nuc ENST00000155093.8
ensembl_prot ENSP00000155093.3
mane_status MANE Select
chr chrY
start 2935381
end 2982506
strand +
ver v1.2
region chrY:2935381-2982506
region5000 chrY:2930381-2987506
regionname0 ZFY_chrY_2935381_2982506
regionname5000 ZFY_chrY_2930381_2987506

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 801 130 18 20 70 4 16 55 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0002 0/0 260 1 0 0 1 0 0 1 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 2406 129 18 20 70 3 16 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
c0002 0/0 2406 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
c0003 0/0 2404 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/1 2931 104 15 11 68 3 6 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
t0002 1/0 2931 22 0 9 1 1 10 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
t0003 0/0 2931 2 0 0 2 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
t0004 0/0 2929 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
t0005 0/0 2931 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
t0006 0/0 2931 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0002 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0003 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0004 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0005 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0006 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0007 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0008 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0009 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0010 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0011 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0012 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0013 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0014 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0015 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0016 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0017 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0018 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0019 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0020 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0021 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0022 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0023 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0024 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0025 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0026 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0027 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0028 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0029 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0030 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0031 0/1 1 0 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0032 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0033 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0034 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0035 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0036 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0037 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0038 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0039 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0040 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0041 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0042 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0043 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0044 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0045 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0046 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0047 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0048 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0049 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0050 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0051 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0052 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0053 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0054 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0055 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0056 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0057 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0058 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0059 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0060 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0061 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0062 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0063 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0064 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0065 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0066 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0067 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0068 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0069 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0070 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0071 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0072 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0073 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0074 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0075 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0076 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0077 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0078 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0079 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0080 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0081 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0082 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0083 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0084 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0085 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0086 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0087 1/0 1 0 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0088 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0089 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0090 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0091 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0092 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0093 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0094 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0095 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0096 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0097 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0098 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0099 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0100 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0101 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0102 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0103 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0104 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0105 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0106 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0107 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0108 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0109 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0110 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0111 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0112 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0113 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0114 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0115 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0116 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0117 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0118 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0119 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0120 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0121 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0122 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0123 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0124 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0125 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0126 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0127 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0128 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0129 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0130 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
g0131 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 2406 129 18 20 70 3 16 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0001c0002 0/0 2406 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0002c0003 0/0 2404 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/1 5336 102 15 11 67 2 6 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0001c0001t0002 1/0 5336 22 0 9 1 1 10 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0001c0001t0003 0/0 5336 2 0 0 2 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0001c0001t0004 0/0 5334 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0001c0001t0005 0/0 5336 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0001c0001t0006 0/0 5336 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0001c0002t0001 0/0 5336 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506
a0002c0003t0001 0/0 5334 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY copy fasta chrY 2930381 2987506

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0002 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0003 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0004 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0005 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0006 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0007 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0008 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0009 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0010 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0012 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0013 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0014 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0015 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0016 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0017 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0018 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0019 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0021 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0023 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0024 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0025 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0029 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0030 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0031 0/1 1 0 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0032 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0033 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0035 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0036 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0037 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0038 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0039 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0040 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0041 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0042 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0043 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0045 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0046 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0047 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0048 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0049 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0050 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0051 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0052 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0053 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0054 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0055 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0056 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0057 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0058 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0059 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0060 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0061 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0063 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0064 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0065 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0066 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0067 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0068 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0069 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0070 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0071 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0072 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0073 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0074 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0075 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0076 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0097 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0098 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0099 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0100 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0101 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0102 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0103 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0104 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0105 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0106 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0107 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0108 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0109 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0110 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0111 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0112 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0113 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0114 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0115 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0116 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0117 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0118 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0119 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0120 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0121 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0122 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0123 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0124 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0125 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0126 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0127 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0128 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0129 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0130 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0001g0131 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0026 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0027 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0028 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0077 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0078 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0079 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0080 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0081 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0082 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0083 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0084 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0085 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0086 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0087 1/0 1 0 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0088 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0089 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0090 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0091 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0092 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0093 0/0 1 0 1 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0094 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0002g0095 0/0 1 0 0 0 0 1 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0003g0044 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0003g0062 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0004g0096 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0005g0022 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0001t0006g0020 0/0 1 1 0 0 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0001c0002t0001g0034 0/0 1 0 0 0 1 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
a0002c0003t0001g0011 0/0 1 0 0 1 0 0 ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00140 hp1 a0001 c0001 t0001 g0041 EUR GBR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG00280 hp1 a0001 c0001 t0001 g0060 EUR FIN ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG00609 hp1 a0001 c0001 t0003 g0044 EAS CHS ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG00621 hp1 a0001 c0001 t0001 g0021 EAS CHS ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG00642 hp1 a0001 c0001 t0002 g0085 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG00673 hp1 a0001 c0001 t0001 g0029 EAS CHS ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG00738 hp1 a0001 c0001 t0002 g0086 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01069 hp1 a0001 c0001 t0001 g0032 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01074 hp1 a0001 c0001 t0001 g0065 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01099 hp1 a0001 c0001 t0001 g0038 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01106 hp1 a0001 c0001 t0001 g0024 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01109 hp1 a0001 c0001 t0001 g0023 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01167 hp1 a0001 c0001 t0001 g0040 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01192 hp1 a0001 c0001 t0001 g0068 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01243 hp1 a0001 c0001 t0002 g0082 AMR PUR ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01255 hp1 a0001 c0001 t0001 g0030 AMR CLM ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01256 hp1 a0001 c0001 t0001 g0050 AMR CLM ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01258 hp1 a0001 c0001 t0001 g0051 AMR CLM ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01261 hp1 a0001 c0001 t0002 g0078 AMR CLM ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01358 hp1 a0001 c0001 t0002 g0083 AMR CLM ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01433 hp1 a0001 c0001 t0001 g0052 AMR CLM ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01928 hp1 a0001 c0001 t0002 g0093 AMR PEL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01934 hp1 a0001 c0001 t0002 g0081 AMR PEL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01943 hp1 a0001 c0001 t0002 g0080 AMR PEL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG01952 hp1 a0001 c0001 t0002 g0089 AMR PEL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02015 hp1 a0001 c0001 t0001 g0097 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02027 hp1 a0001 c0001 t0001 g0059 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02040 hp1 a0001 c0001 t0001 g0045 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02055 hp1 a0001 c0001 t0001 g0123 AFR ACB ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02056 hp1 a0001 c0001 t0001 g0061 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02071 hp1 a0001 c0001 t0001 g0042 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02074 hp1 a0001 c0001 t0001 g0048 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02083 hp1 a0001 c0001 t0001 g0046 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02129 hp1 a0001 c0001 t0001 g0043 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02132 hp1 a0001 c0001 t0002 g0027 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02135 hp1 a0001 c0001 t0001 g0058 EAS KHV ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02145 hp1 a0001 c0001 t0001 g0130 AFR ACB ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02258 hp1 a0001 c0001 t0001 g0129 AFR ACB ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02572 hp1 a0001 c0001 t0001 g0064 AFR GWD ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02602 hp1 a0001 c0001 t0002 g0091 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02647 hp1 a0001 c0001 t0001 g0019 AFR GWD ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02698 hp1 a0001 c0001 t0002 g0095 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02717 hp1 a0001 c0001 t0001 g0128 AFR GWD ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02735 hp1 a0001 c0001 t0001 g0033 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02738 hp1 a0001 c0001 t0002 g0028 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02895 hp1 a0001 c0001 t0001 g0122 AFR GWD ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02965 hp1 a0001 c0001 t0001 g0120 AFR ESN ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03017 hp1 a0001 c0001 t0002 g0079 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03098 hp1 a0001 c0001 t0005 g0022 AFR MSL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03130 hp1 a0001 c0001 t0001 g0121 AFR ESN ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03139 hp1 a0001 c0001 t0001 g0119 AFR ESN ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03209 hp1 a0001 c0001 t0001 g0124 AFR MSL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03225 hp1 a0001 c0001 t0004 g0096 AFR MSL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03490 hp1 a0001 c0001 t0002 g0026 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03492 hp1 a0001 c0001 t0002 g0084 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03579 hp1 a0001 c0001 t0001 g0054 AFR MSL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03654 hp1 a0001 c0001 t0002 g0090 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03688 hp1 a0001 c0001 t0001 g0076 SAS STU ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03710 hp1 a0001 c0001 t0001 g0036 SAS PJL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03942 hp1 a0001 c0001 t0001 g0066 SAS BEB ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG04115 hp1 a0001 c0001 t0002 g0088 SAS STU ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG04199 hp1 a0001 c0001 t0001 g0025 SAS STU ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG04204 hp1 a0001 c0001 t0002 g0094 SAS STU ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG04228 hp1 a0001 c0001 t0002 g0092 SAS STU ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18522 hp1 a0001 c0001 t0001 g0127 AFR YRI ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18612 hp1 a0001 c0001 t0001 g0069 EAS CHB ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18747 hp1 a0001 c0001 t0001 g0049 EAS CHB ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18940 hp1 a0001 c0001 t0001 g0106 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18943 hp1 a0001 c0001 t0001 g0013 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18944 hp1 a0001 c0001 t0001 g0118 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18945 hp1 a0001 c0001 t0001 g0035 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18948 hp1 a0001 c0001 t0001 g0113 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18952 hp1 a0001 c0001 t0001 g0103 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18953 hp1 a0001 c0001 t0001 g0003 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18959 hp1 a0001 c0001 t0001 g0037 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18960 hp1 a0001 c0001 t0001 g0109 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18961 hp1 a0001 c0001 t0001 g0104 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18962 hp1 a0001 c0001 t0001 g0001 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18965 hp1 a0001 c0001 t0001 g0006 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18966 hp1 a0001 c0001 t0001 g0114 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18967 hp1 a0001 c0001 t0001 g0131 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18970 hp1 a0001 c0001 t0001 g0100 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18971 hp1 a0001 c0001 t0001 g0074 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18974 hp1 a0001 c0001 t0001 g0071 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18977 hp1 a0001 c0001 t0001 g0018 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18982 hp1 a0001 c0001 t0003 g0062 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18983 hp1 a0001 c0001 t0001 g0108 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18984 hp1 a0001 c0001 t0001 g0067 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18985 hp1 a0001 c0001 t0001 g0010 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18986 hp1 a0001 c0001 t0001 g0005 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18988 hp1 a0001 c0001 t0001 g0115 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18989 hp1 a0001 c0001 t0001 g0075 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18990 hp1 a0001 c0001 t0001 g0015 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18994 hp1 a0001 c0001 t0001 g0016 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18995 hp1 a0001 c0001 t0001 g0110 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19000 hp1 a0001 c0001 t0001 g0017 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19004 hp1 a0001 c0001 t0001 g0107 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19005 hp1 a0001 c0001 t0001 g0004 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19006 hp1 a0001 c0001 t0001 g0072 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19007 hp1 a0001 c0001 t0001 g0009 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19009 hp1 a0001 c0001 t0001 g0057 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19012 hp1 a0001 c0001 t0001 g0111 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19043 hp1 a0001 c0001 t0006 g0020 AFR LWK ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19056 hp1 a0001 c0001 t0001 g0101 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19058 hp1 a0001 c0001 t0001 g0117 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19060 hp1 a0001 c0001 t0001 g0012 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19062 hp1 a0001 c0001 t0001 g0047 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19063 hp1 a0001 c0001 t0001 g0102 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19066 hp1 a0001 c0001 t0001 g0002 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19067 hp1 a0001 c0001 t0001 g0014 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19068 hp1 a0001 c0001 t0001 g0112 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19070 hp1 a0001 c0001 t0001 g0008 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19072 hp1 a0001 c0001 t0001 g0055 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19075 hp1 a0002 c0003 t0001 g0011 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19076 hp1 a0001 c0001 t0001 g0098 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19079 hp1 a0001 c0001 t0001 g0073 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19082 hp1 a0001 c0001 t0001 g0116 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19083 hp1 a0001 c0001 t0001 g0063 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19085 hp1 a0001 c0001 t0001 g0056 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19086 hp1 a0001 c0001 t0001 g0039 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19088 hp1 a0001 c0001 t0001 g0007 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19089 hp1 a0001 c0001 t0001 g0099 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA19091 hp1 a0001 c0001 t0001 g0070 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA20752 hp1 a0001 c0001 t0002 g0077 EUR TSI ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA20805 hp1 a0001 c0002 t0001 g0034 EUR TSI ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA20905 hp1 a0001 c0001 t0001 g0053 SAS GIH ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG02486 hp1 a0001 c0001 t0001 g0126 AFR ACB ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
HG03471 hp1 a0001 c0001 t0001 g0125 AFR MSL ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
NA18955 hp1 a0001 c0001 t0001 g0105 EAS JPT ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0031 REF REF ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506
homoSapiens_grch38 hp1 a0001 c0001 t0002 g0087 REF REF ZFY_chrY_2930381_2987506 ZFY chrY 2930381 2987506

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrY:2975224 AC
AC
 A
A
 1 a0002
a0002
 1 NA19075.hp1
NA19075.hp1
 frameshift_variant HIGH c.767delC
c.767delC
 p.Pro256fs
p.Pro256fs
 ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 4/8 1184/5336 767/2406 256/801 INFO_REALIGN_3_PRIME chrY 2975224
chrY:2975593 TC
TC
 T
T
 1 a0002
a0002
 1 NA19075.hp1
NA19075.hp1
 frameshift_variant HIGH c.870delC
c.870delC
 p.Arg291fs
p.Arg291fs
 ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/8 1287/5336 870/2406 290/801 INFO_REALIGN_3_PRIME chrY 2975593

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrY:2979822 T
T
 C
C
 1 a0001c0002
a0001c0002
 1 NA20805.hp1
NA20805.hp1
 synonymous_variant LOW c.2235T>C
c.2235T>C
 p.Cys745Cys
p.Cys745Cys
 ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 8/8 2652/5336 2235/2406 745/801 chrY 2979822

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrY:2935580 C
C
 T
T
 1 a0001c0001t0006
a0001c0001t0006
 1 NA19043.hp1
NA19043.hp1
 5_prime_UTR_premature_start_codon_gain_variant LOW c.-218C>T
c.-218C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/8 chrY 2935580
chrY:2935676 T
T
 C
C
 7 a0001c0001t0001
a0001c0001t0003
a0001c0001t0004
others(4): Show 
a0001c0001t0001
a0001c0001t0003
a0001c0001t0004
a0001c0001t0005
a0001c0001t0006
a0001c0002t0001
a0002c0003t0001
 109 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(106): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG01069.hp1
HG01074.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02735.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03579.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 5_prime_UTR_variant MODIFIER c.-122T>C
c.-122T>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/8 18261 chrY 2935676
chrY:2935750 G
G
 C
C
 1 a0001c0001t0004
a0001c0001t0004
 1 HG03225.hp1
HG03225.hp1
 5_prime_UTR_variant MODIFIER c.-48G>C
c.-48G>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/8 18187 chrY 2935750
chrY:2980450 T
T
 G
G
 1 a0001c0001t0003
a0001c0001t0003
 2 HG00609.hp1
NA18982.hp1
HG00609.hp1
NA18982.hp1
 3_prime_UTR_variant MODIFIER c.*457T>G
c.*457T>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 8/8 457 chrY 2980450
chrY:2982141 A
A
 G
G
 1 a0001c0001t0005
a0001c0001t0005
 1 HG03098.hp1
HG03098.hp1
 3_prime_UTR_variant MODIFIER c.*2148A>G
c.*2148A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 8/8 2148 chrY 2982141
chrY:2982180 AAG
AAG
 A
A
 1 a0001c0001t0004
a0001c0001t0004
 1 HG03225.hp1
HG03225.hp1
 3_prime_UTR_variant MODIFIER c.*2189_*2190delGA
c.*2189_*2190delGA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 8/8 2189 INFO_REALIGN_3_PRIME chrY 2982180

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrY:2935834 C
C
 CG
CG
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.-29+72dupG
c.-29+72dupG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2935834
chrY:2936630 G
G
 T
T
 12 a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
others(9): Show 
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
 12 HG02055.hp1
HG02145.hp1
HG02258.hp1
others(9): Show 
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03471.hp1
NA18522.hp1
 intron_variant MODIFIER c.-29+861G>T
c.-29+861G>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2936630
chrY:2937280 G
G
 A
A
 18 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(15): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0002c0003t0001g0011
 18 NA18943.hp1
NA18953.hp1
NA18962.hp1
others(15): Show 
NA18943.hp1
NA18953.hp1
NA18962.hp1
NA18965.hp1
NA18977.hp1
NA18985.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19000.hp1
NA19005.hp1
NA19007.hp1
NA19060.hp1
NA19066.hp1
NA19067.hp1
NA19070.hp1
NA19075.hp1
NA19088.hp1
 intron_variant MODIFIER c.-29+1511G>A
c.-29+1511G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2937280
chrY:2937488 C
C
 CA
CA
 8 a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0024
others(5): Show 
a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0002g0026
a0001c0001t0002g0027
a0001c0001t0002g0028
a0001c0001t0005g0022
 8 HG00621.hp1
HG01106.hp1
HG01109.hp1
others(5): Show 
HG00621.hp1
HG01106.hp1
HG01109.hp1
HG02132.hp1
HG02738.hp1
HG03098.hp1
HG03490.hp1
HG04199.hp1
 intron_variant MODIFIER c.-29+1741dupA
c.-29+1741dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937488
chrY:2937488 C
C
 CAAAAAAA
others(1): Show 
CAAAAAAAA
 1 a0001c0001t0006g0020
a0001c0001t0006g0020
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.-29+1734_-29+1741d
others(10): Show 
c.-29+1734_-29+1741dupAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937488
chrY:2937488 C
C
 CAAAAAAA
others(15): Show 
CAAAAAAAAAAAAAAAAAAAAAA
 1 a0001c0001t0001g0019
a0001c0001t0001g0019
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.-29+1720_-29+1741d
others(24): Show 
c.-29+1720_-29+1741dupAAAAAAAAAAAAAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937488
chrY:2937488 CA
CA
 C
C
 3 a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0004g0096
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0004g0096
 3 HG02015.hp1
HG03225.hp1
NA19076.hp1
HG02015.hp1
HG03225.hp1
NA19076.hp1
 intron_variant MODIFIER c.-29+1741delA
c.-29+1741delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937488
chrY:2937488 CAAA
CAAA
 C
C
 21 a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
others(18): Show 
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0131
 21 NA18940.hp1
NA18944.hp1
NA18948.hp1
others(18): Show 
NA18940.hp1
NA18944.hp1
NA18948.hp1
NA18952.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18983.hp1
NA18988.hp1
NA18995.hp1
NA19004.hp1
NA19012.hp1
NA19056.hp1
NA19058.hp1
NA19063.hp1
NA19068.hp1
NA19082.hp1
NA19089.hp1
 intron_variant MODIFIER c.-29+1739_-29+1741d
others(5): Show 
c.-29+1739_-29+1741delAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937488
chrY:2937633 GA
GA
 G
G
 1 a0001c0001t0001g0098
a0001c0001t0001g0098
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.-29+1868delA
c.-29+1868delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937633
chrY:2937685 GT
GT
 G
G
 1 a0001c0001t0001g0098
a0001c0001t0001g0098
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.-29+1920delT
c.-29+1920delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937685
chrY:2937703 G
G
 A
A
 1 a0001c0001t0001g0029
a0001c0001t0001g0029
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.-29+1934G>A
c.-29+1934G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2937703
chrY:2937989 A
A
 AT
AT
 2 a0001c0001t0002g0028
a0001c0001t0002g0095
a0001c0001t0002g0028
a0001c0001t0002g0095
 2 HG02698.hp1
HG02738.hp1
HG02698.hp1
HG02738.hp1
 intron_variant MODIFIER c.-29+2236dupT
c.-29+2236dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937989
chrY:2937989 AT
AT
 A
A
 109 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(106): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0019
a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0001t0004g0096
a0001c0001t0005g0022
a0001c0001t0006g0020
a0001c0002t0001g0034
a0002c0003t0001g0011
 109 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(106): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG01069.hp1
HG01074.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02735.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03579.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-29+2236delT
c.-29+2236delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2937989
chrY:2938154 A
A
 AT
AT
 22 a0001c0001t0001g0018
a0001c0001t0001g0023
a0001c0001t0001g0029
others(19): Show 
a0001c0001t0001g0018
a0001c0001t0001g0023
a0001c0001t0001g0029
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0002g0027
a0001c0001t0002g0028
a0001c0001t0002g0090
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0093
a0001c0001t0002g0094
a0001c0001t0005g0022
 22 HG00673.hp1
HG01074.hp1
HG01109.hp1
others(19): Show 
HG00673.hp1
HG01074.hp1
HG01109.hp1
HG01928.hp1
HG02132.hp1
HG02572.hp1
HG02602.hp1
HG02738.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03654.hp1
HG03942.hp1
HG04204.hp1
HG04228.hp1
NA18940.hp1
NA18952.hp1
NA18955.hp1
NA18961.hp1
NA18977.hp1
NA19004.hp1
 intron_variant MODIFIER c.-29+2421dupT
c.-29+2421dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938154
chrY:2938154 A
A
 ATT
ATT
 19 a0001c0001t0001g0024
a0001c0001t0001g0067
a0001c0001t0001g0068
others(16): Show 
a0001c0001t0001g0024
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0098
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
 19 HG01106.hp1
HG01192.hp1
HG02055.hp1
others(16): Show 
HG01106.hp1
HG01192.hp1
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02895.hp1
HG03209.hp1
HG03471.hp1
NA18522.hp1
NA18948.hp1
NA18960.hp1
NA18983.hp1
NA18984.hp1
NA18995.hp1
NA19012.hp1
NA19068.hp1
NA19076.hp1
 intron_variant MODIFIER c.-29+2420_-29+2421d
others(4): Show 
c.-29+2420_-29+2421dupTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938154
chrY:2938154 A
A
 ATTT
ATTT
 10 a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
others(7): Show 
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0131
 10 NA18612.hp1
NA18944.hp1
NA18966.hp1
others(7): Show 
NA18612.hp1
NA18944.hp1
NA18966.hp1
NA18967.hp1
NA18974.hp1
NA18988.hp1
NA19006.hp1
NA19058.hp1
NA19082.hp1
NA19091.hp1
 intron_variant MODIFIER c.-29+2419_-29+2421d
others(5): Show 
c.-29+2419_-29+2421dupTTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938154
chrY:2938154 A
A
 ATTTT
ATTTT
 5 a0001c0001t0001g0025
a0001c0001t0001g0073
a0001c0001t0001g0074
others(2): Show 
a0001c0001t0001g0025
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
 5 HG03688.hp1
HG04199.hp1
NA18971.hp1
others(2): Show 
HG03688.hp1
HG04199.hp1
NA18971.hp1
NA18989.hp1
NA19079.hp1
 intron_variant MODIFIER c.-29+2418_-29+2421d
others(6): Show 
c.-29+2418_-29+2421dupTTTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938154
chrY:2938154 AT
AT
 A
A
 35 a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
others(32): Show 
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0019
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0002g0077
a0001c0001t0002g0078
a0001c0001t0002g0079
a0001c0001t0002g0080
a0001c0001t0002g0081
a0001c0001t0003g0044
a0001c0002t0001g0034
 35 HG00140.hp1
HG00609.hp1
HG01069.hp1
others(32): Show 
HG00140.hp1
HG00609.hp1
HG01069.hp1
HG01099.hp1
HG01167.hp1
HG01255.hp1
HG01261.hp1
HG01934.hp1
HG01943.hp1
HG02040.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02647.hp1
HG02735.hp1
HG03017.hp1
HG03710.hp1
NA18747.hp1
NA18945.hp1
NA18953.hp1
NA18959.hp1
NA18965.hp1
NA18985.hp1
NA18986.hp1
NA19005.hp1
NA19007.hp1
NA19062.hp1
NA19066.hp1
NA19070.hp1
NA19086.hp1
NA19088.hp1
NA20752.hp1
NA20805.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-29+2421delT
c.-29+2421delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938154
chrY:2938154 ATT
ATT
 A
A
 1 a0001c0001t0001g0001
a0001c0001t0001g0001
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.-29+2420_-29+2421d
others(4): Show 
c.-29+2420_-29+2421delTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938154
chrY:2938154 ATTTTTTT
others(8): Show 
ATTTTTTTTTTTTTTT
 A
A
 1 a0001c0001t0006g0020
a0001c0001t0006g0020
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.-29+2407_-29+2421d
others(17): Show 
c.-29+2407_-29+2421delTTTTTTTTTTTTTTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938154
chrY:2938285 A
A
 C
C
 1 a0001c0001t0001g0001
a0001c0001t0001g0001
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.-29+2516A>C
c.-29+2516A>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2938285
chrY:2938879 C
C
 G
G
 1 a0001c0001t0001g0066
a0001c0001t0001g0066
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.-29+3110C>G
c.-29+3110C>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2938879
chrY:2938887 C
C
 G
G
 2 a0001c0001t0001g0023
a0001c0001t0001g0065
a0001c0001t0001g0023
a0001c0001t0001g0065
 2 HG01074.hp1
HG01109.hp1
HG01074.hp1
HG01109.hp1
 intron_variant MODIFIER c.-29+3118C>G
c.-29+3118C>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2938887
chrY:2938967 A
A
 G
G
 2 a0001c0001t0001g0023
a0001c0001t0001g0065
a0001c0001t0001g0023
a0001c0001t0001g0065
 2 HG01074.hp1
HG01109.hp1
HG01074.hp1
HG01109.hp1
 intron_variant MODIFIER c.-29+3198A>G
c.-29+3198A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2938967
chrY:2938982 CTT
CTT
 C
C
 1 a0001c0001t0004g0096
a0001c0001t0004g0096
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.-29+3214_-29+3215d
others(4): Show 
c.-29+3214_-29+3215delTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2938982
chrY:2938983 T
T
 TTA
TTA
 19 a0001c0001t0001g0002
a0001c0001t0001g0025
a0001c0001t0001g0029
others(16): Show 
a0001c0001t0001g0002
a0001c0001t0001g0025
a0001c0001t0001g0029
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0072
a0001c0001t0001g0074
a0001c0001t0001g0102
a0001c0001t0001g0110
a0001c0001t0002g0028
a0001c0001t0002g0081
a0001c0001t0002g0088
a0001c0001t0002g0090
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0003g0044
a0002c0003t0001g0011
 19 HG00280.hp1
HG00609.hp1
HG00673.hp1
others(16): Show 
HG00280.hp1
HG00609.hp1
HG00673.hp1
HG01934.hp1
HG02027.hp1
HG02040.hp1
HG02083.hp1
HG02602.hp1
HG02738.hp1
HG03654.hp1
HG04115.hp1
HG04199.hp1
HG04228.hp1
NA18971.hp1
NA18995.hp1
NA19006.hp1
NA19063.hp1
NA19066.hp1
NA19075.hp1
 intron_variant MODIFIER c.-29+3253_-29+3254d
others(4): Show 
c.-29+3253_-29+3254dupTA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 T
T
 TTATA
TTATA
 23 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0004
others(20): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0047
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0075
a0001c0001t0001g0098
a0001c0001t0001g0111
a0001c0001t0001g0115
a0001c0001t0002g0089
a0001c0001t0002g0093
a0001c0001t0002g0094
a0001c0001t0003g0062
 23 HG01192.hp1
HG01928.hp1
HG01952.hp1
others(20): Show 
HG01192.hp1
HG01928.hp1
HG01952.hp1
HG02056.hp1
HG04204.hp1
NA18943.hp1
NA18953.hp1
NA18962.hp1
NA18965.hp1
NA18982.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA19005.hp1
NA19012.hp1
NA19060.hp1
NA19062.hp1
NA19067.hp1
NA19076.hp1
NA19083.hp1
 intron_variant MODIFIER c.-29+3251_-29+3254d
others(6): Show 
c.-29+3251_-29+3254dupTATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 T
T
 TTATATA
TTATATA
 12 a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
others(9): Show 
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0097
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0131
 12 HG02015.hp1
NA18948.hp1
NA18967.hp1
others(9): Show 
HG02015.hp1
NA18948.hp1
NA18967.hp1
NA18977.hp1
NA18985.hp1
NA19000.hp1
NA19007.hp1
NA19058.hp1
NA19068.hp1
NA19070.hp1
NA19082.hp1
NA19088.hp1
 intron_variant MODIFIER c.-29+3249_-29+3254d
others(8): Show 
c.-29+3249_-29+3254dupTATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 T
T
 TTATATAT
others(1): Show 
TTATATATA
 2 a0001c0001t0001g0048
a0001c0001t0001g0076
a0001c0001t0001g0048
a0001c0001t0001g0076
 2 HG02074.hp1
HG03688.hp1
HG02074.hp1
HG03688.hp1
 intron_variant MODIFIER c.-29+3247_-29+3254d
others(10): Show 
c.-29+3247_-29+3254dupTATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 T
T
 TTATATAT
others(3): Show 
TTATATATATA
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.-29+3245_-29+3254d
others(12): Show 
c.-29+3245_-29+3254dupTATATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 T
T
 TTATATAT
others(5): Show 
TTATATATATATA
 1 a0001c0001t0001g0118
a0001c0001t0001g0118
 1 NA18944.hp1
NA18944.hp1
 intron_variant MODIFIER c.-29+3243_-29+3254d
others(14): Show 
c.-29+3243_-29+3254dupTATATATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 T
T
 TTATATAT
others(7): Show 
TTATATATATATATA
 1 a0001c0001t0001g0107
a0001c0001t0001g0107
 1 NA19004.hp1
NA19004.hp1
 intron_variant MODIFIER c.-29+3241_-29+3254d
others(16): Show 
c.-29+3241_-29+3254dupTATATATATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTA
TTA
 T
T
 19 a0001c0001t0001g0021
a0001c0001t0001g0039
a0001c0001t0001g0040
others(16): Show 
a0001c0001t0001g0021
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0104
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0002g0078
a0001c0001t0002g0079
a0001c0001t0002g0085
 19 HG00140.hp1
HG00621.hp1
HG00642.hp1
others(16): Show 
HG00140.hp1
HG00621.hp1
HG00642.hp1
HG01167.hp1
HG01261.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02965.hp1
HG03017.hp1
HG03139.hp1
NA18522.hp1
NA18961.hp1
NA18974.hp1
NA19009.hp1
NA19072.hp1
NA19079.hp1
NA19085.hp1
NA19086.hp1
 intron_variant MODIFIER c.-29+3253_-29+3254d
others(4): Show 
c.-29+3253_-29+3254delTA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTATA
TTATA
 T
T
 18 a0001c0001t0001g0019
a0001c0001t0001g0037
a0001c0001t0001g0038
others(15): Show 
a0001c0001t0001g0019
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0054
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0099
a0001c0001t0001g0103
a0001c0001t0001g0114
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0002g0026
a0001c0001t0002g0077
a0001c0001t0002g0082
a0001c0001t0002g0083
a0001c0001t0002g0084
a0001c0001t0006g0020
 18 HG01099.hp1
HG01243.hp1
HG01358.hp1
others(15): Show 
HG01099.hp1
HG01243.hp1
HG01358.hp1
HG02055.hp1
HG02647.hp1
HG03209.hp1
HG03471.hp1
HG03490.hp1
HG03492.hp1
HG03579.hp1
NA18612.hp1
NA18952.hp1
NA18959.hp1
NA18966.hp1
NA19043.hp1
NA19089.hp1
NA19091.hp1
NA20752.hp1
 intron_variant MODIFIER c.-29+3251_-29+3254d
others(6): Show 
c.-29+3251_-29+3254delTATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTATATA
TTATATA
 T
T
 4 a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0122
others(1): Show 
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0122
a0001c0001t0002g0095
 4 HG02698.hp1
HG02895.hp1
HG03710.hp1
others(1): Show 
HG02698.hp1
HG02895.hp1
HG03710.hp1
NA18945.hp1
 intron_variant MODIFIER c.-29+3249_-29+3254d
others(8): Show 
c.-29+3249_-29+3254delTATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTATATAT
others(1): Show 
TTATATATA
 T
T
 5 a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0065
others(2): Show 
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0005g0022
 5 HG01074.hp1
HG01106.hp1
HG01109.hp1
others(2): Show 
HG01074.hp1
HG01106.hp1
HG01109.hp1
HG03098.hp1
HG03942.hp1
 intron_variant MODIFIER c.-29+3247_-29+3254d
others(10): Show 
c.-29+3247_-29+3254delTATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTATATAT
others(3): Show 
TTATATATATA
 T
T
 1 a0001c0001t0001g0064
a0001c0001t0001g0064
 1 HG02572.hp1
HG02572.hp1
 intron_variant MODIFIER c.-29+3245_-29+3254d
others(12): Show 
c.-29+3245_-29+3254delTATATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTATATAT
others(5): Show 
TTATATATATATA
 T
T
 2 a0001c0001t0001g0033
a0001c0002t0001g0034
a0001c0001t0001g0033
a0001c0002t0001g0034
 2 HG02735.hp1
NA20805.hp1
HG02735.hp1
NA20805.hp1
 intron_variant MODIFIER c.-29+3243_-29+3254d
others(14): Show 
c.-29+3243_-29+3254delTATATATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTATATAT
others(7): Show 
TTATATATATATATA
 T
T
 1 a0001c0001t0001g0032
a0001c0001t0001g0032
 1 HG01069.hp1
HG01069.hp1
 intron_variant MODIFIER c.-29+3241_-29+3254d
others(16): Show 
c.-29+3241_-29+3254delTATATATATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2938983 TTATATAT
others(9): Show 
TTATATATATATATATA
 T
T
 6 a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0050
others(3): Show 
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
 6 HG01255.hp1
HG01256.hp1
HG01258.hp1
others(3): Show 
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-29+3239_-29+3254d
others(18): Show 
c.-29+3239_-29+3254delTATATATATATATATA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2938983
chrY:2939022 T
T
 TAA
TAA
 1 a0001c0001t0001g0042
a0001c0001t0001g0042
 1 HG02071.hp1
HG02071.hp1
 intron_variant MODIFIER c.-29+3255_-29+3256d
others(4): Show 
c.-29+3255_-29+3256dupAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2939022
chrY:2939024 A
A
 T
T
 2 a0001c0001t0001g0025
a0001c0001t0001g0076
a0001c0001t0001g0025
a0001c0001t0001g0076
 2 HG03688.hp1
HG04199.hp1
HG03688.hp1
HG04199.hp1
 intron_variant MODIFIER c.-29+3255A>T
c.-29+3255A>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2939024
chrY:2939032 ACT
ACT
 A
A
 2 a0001c0001t0001g0041
a0001c0001t0004g0096
a0001c0001t0001g0041
a0001c0001t0004g0096
 2 HG00140.hp1
HG03225.hp1
HG00140.hp1
HG03225.hp1
 intron_variant MODIFIER c.-29+3266_-29+3267d
others(4): Show 
c.-29+3266_-29+3267delCT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2939032
chrY:2939441 C
C
 T
T
 1 a0001c0001t0001g0016
a0001c0001t0001g0016
 1 NA18994.hp1
NA18994.hp1
 intron_variant MODIFIER c.-29+3672C>T
c.-29+3672C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2939441
chrY:2939498 C
C
 A
A
 3 a0001c0001t0001g0030
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0030
a0001c0001t0001g0050
a0001c0001t0001g0051
 3 HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
 intron_variant MODIFIER c.-29+3729C>A
c.-29+3729C>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2939498
chrY:2939797 T
T
 G
G
 2 a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0050
a0001c0001t0001g0051
 2 HG01256.hp1
HG01258.hp1
HG01256.hp1
HG01258.hp1
 intron_variant MODIFIER c.-29+4028T>G
c.-29+4028T>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2939797
chrY:2940114 G
G
 A
A
 1 a0001c0001t0001g0122
a0001c0001t0001g0122
 1 HG02895.hp1
HG02895.hp1
 intron_variant MODIFIER c.-29+4345G>A
c.-29+4345G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2940114
chrY:2940182 G
G
 GT
GT
 1 a0001c0001t0001g0098
a0001c0001t0001g0098
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.-29+4416dupT
c.-29+4416dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2940182
chrY:2940477 C
C
 A
A
 18 a0001c0001t0001g0021
a0001c0001t0001g0029
a0001c0001t0001g0035
others(15): Show 
a0001c0001t0001g0021
a0001c0001t0001g0029
a0001c0001t0001g0035
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0047
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0067
a0001c0001t0001g0098
a0001c0001t0003g0044
a0001c0001t0003g0062
 18 HG00609.hp1
HG00621.hp1
HG00673.hp1
others(15): Show 
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG02027.hp1
HG02056.hp1
HG02071.hp1
HG02129.hp1
HG02135.hp1
NA18945.hp1
NA18959.hp1
NA18982.hp1
NA18984.hp1
NA19062.hp1
NA19072.hp1
NA19076.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
 intron_variant MODIFIER c.-29+4708C>A
c.-29+4708C>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2940477
chrY:2941327 G
G
 A
A
 1 a0001c0001t0003g0044
a0001c0001t0003g0044
 1 HG00609.hp1
HG00609.hp1
 intron_variant MODIFIER c.-29+5558G>A
c.-29+5558G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2941327
chrY:2941499 A
A
 AT
AT
 1 a0001c0001t0001g0130
a0001c0001t0001g0130
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.-29+5748dupT
c.-29+5748dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2941499
chrY:2941499 AT
AT
 A
A
 3 a0001c0001t0001g0071
a0001c0001t0001g0097
a0001c0001t0001g0099
a0001c0001t0001g0071
a0001c0001t0001g0097
a0001c0001t0001g0099
 3 HG02015.hp1
NA18974.hp1
NA19089.hp1
HG02015.hp1
NA18974.hp1
NA19089.hp1
 intron_variant MODIFIER c.-29+5748delT
c.-29+5748delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2941499
chrY:2941934 C
C
 CTG
CTG
 3 a0001c0001t0001g0046
a0001c0001t0001g0068
a0001c0001t0005g0022
a0001c0001t0001g0046
a0001c0001t0001g0068
a0001c0001t0005g0022
 3 HG01192.hp1
HG02083.hp1
HG03098.hp1
HG01192.hp1
HG02083.hp1
HG03098.hp1
 intron_variant MODIFIER c.-29+6193_-29+6194d
others(4): Show 
c.-29+6193_-29+6194dupGT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2941934
chrY:2941934 C
C
 CTGTG
CTGTG
 3 a0001c0001t0001g0019
a0001c0001t0001g0025
a0001c0001t0001g0076
a0001c0001t0001g0019
a0001c0001t0001g0025
a0001c0001t0001g0076
 3 HG02647.hp1
HG03688.hp1
HG04199.hp1
HG02647.hp1
HG03688.hp1
HG04199.hp1
 intron_variant MODIFIER c.-29+6191_-29+6194d
others(6): Show 
c.-29+6191_-29+6194dupGTGT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2941934
chrY:2941934 CTG
CTG
 C
C
 2 a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0071
a0001c0001t0001g0074
 2 NA18971.hp1
NA18974.hp1
NA18971.hp1
NA18974.hp1
 intron_variant MODIFIER c.-29+6193_-29+6194d
others(4): Show 
c.-29+6193_-29+6194delGT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2941934
chrY:2941934 CTGTGTG
CTGTGTG
 C
C
 2 a0001c0001t0002g0089
a0001c0001t0002g0093
a0001c0001t0002g0089
a0001c0001t0002g0093
 2 HG01928.hp1
HG01952.hp1
HG01928.hp1
HG01952.hp1
 intron_variant MODIFIER c.-29+6189_-29+6194d
others(8): Show 
c.-29+6189_-29+6194delGTGTGT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2941934
chrY:2941962 G
G
 A
A
 3 a0001c0001t0001g0049
a0001c0001t0001g0060
a0001c0001t0002g0088
a0001c0001t0001g0049
a0001c0001t0001g0060
a0001c0001t0002g0088
 3 HG00280.hp1
HG04115.hp1
NA18747.hp1
HG00280.hp1
HG04115.hp1
NA18747.hp1
 intron_variant MODIFIER c.-29+6193G>A
c.-29+6193G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2941962
chrY:2941964 A
A
 G
G
 21 a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
others(18): Show 
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0131
 21 NA18940.hp1
NA18944.hp1
NA18948.hp1
others(18): Show 
NA18940.hp1
NA18944.hp1
NA18948.hp1
NA18952.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18983.hp1
NA18988.hp1
NA18995.hp1
NA19004.hp1
NA19012.hp1
NA19056.hp1
NA19058.hp1
NA19063.hp1
NA19068.hp1
NA19082.hp1
NA19089.hp1
 intron_variant MODIFIER c.-29+6195A>G
c.-29+6195A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2941964
chrY:2942045 T
T
 C
C
 1 a0001c0001t0004g0096
a0001c0001t0004g0096
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.-29+6276T>C
c.-29+6276T>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2942045
chrY:2942325 A
A
 AT
AT
 9 a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0098
others(6): Show 
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0098
a0001c0001t0001g0101
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0114
a0001c0001t0002g0028
a0002c0003t0001g0011
 9 HG00140.hp1
HG01167.hp1
HG02738.hp1
others(6): Show 
HG00140.hp1
HG01167.hp1
HG02738.hp1
NA18940.hp1
NA18955.hp1
NA18966.hp1
NA19056.hp1
NA19075.hp1
NA19076.hp1
 intron_variant MODIFIER c.-29+6579dupT
c.-29+6579dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2942325
chrY:2942325 AT
AT
 A
A
 16 a0001c0001t0001g0032
a0001c0001t0001g0037
a0001c0001t0001g0050
others(13): Show 
a0001c0001t0001g0032
a0001c0001t0001g0037
a0001c0001t0001g0050
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0006g0020
 16 HG01069.hp1
HG01256.hp1
HG02055.hp1
others(13): Show 
HG01069.hp1
HG01256.hp1
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03471.hp1
NA18522.hp1
NA18959.hp1
NA19043.hp1
 intron_variant MODIFIER c.-29+6579delT
c.-29+6579delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2942325
chrY:2942394 AT
AT
 A
A
 3 a0001c0001t0001g0003
a0001c0001t0001g0071
a0001c0001t0001g0122
a0001c0001t0001g0003
a0001c0001t0001g0071
a0001c0001t0001g0122
 3 HG02895.hp1
NA18953.hp1
NA18974.hp1
HG02895.hp1
NA18953.hp1
NA18974.hp1
 intron_variant MODIFIER c.-29+6640delT
c.-29+6640delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2942394
chrY:2942542 G
G
 A
A
 114 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(111): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0019
a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0002g0027
a0001c0001t0002g0089
a0001c0001t0002g0090
a0001c0001t0002g0093
a0001c0001t0002g0095
a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0001t0004g0096
a0001c0001t0005g0022
a0001c0001t0006g0020
a0001c0002t0001g0034
a0002c0003t0001g0011
 114 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(111): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG01069.hp1
HG01074.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG01928.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-29+6773G>A
c.-29+6773G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2942542
chrY:2942876 C
C
 A
A
 5 a0001c0001t0002g0027
a0001c0001t0002g0089
a0001c0001t0002g0090
others(2): Show 
a0001c0001t0002g0027
a0001c0001t0002g0089
a0001c0001t0002g0090
a0001c0001t0002g0093
a0001c0001t0002g0095
 5 HG01928.hp1
HG01952.hp1
HG02132.hp1
others(2): Show 
HG01928.hp1
HG01952.hp1
HG02132.hp1
HG02698.hp1
HG03654.hp1
 intron_variant MODIFIER c.-29+7107C>A
c.-29+7107C>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2942876
chrY:2942993 G
G
 C
C
 3 a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
 3 NA18612.hp1
NA19079.hp1
NA19091.hp1
NA18612.hp1
NA19079.hp1
NA19091.hp1
 intron_variant MODIFIER c.-29+7224G>C
c.-29+7224G>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2942993
chrY:2943117 G
G
 A
A
 3 a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
 3 NA18612.hp1
NA19079.hp1
NA19091.hp1
NA18612.hp1
NA19079.hp1
NA19091.hp1
 intron_variant MODIFIER c.-29+7348G>A
c.-29+7348G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2943117
chrY:2943619 G
G
 A
A
 1 a0001c0001t0001g0046
a0001c0001t0001g0046
 1 HG02083.hp1
HG02083.hp1
 intron_variant MODIFIER c.-29+7850G>A
c.-29+7850G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2943619
chrY:2944078 A
A
 G
G
 1 a0001c0001t0001g0041
a0001c0001t0001g0041
 1 HG00140.hp1
HG00140.hp1
 intron_variant MODIFIER c.-29+8309A>G
c.-29+8309A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2944078
chrY:2944351 GT
GT
 G
G
 1 a0001c0001t0001g0038
a0001c0001t0001g0038
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.-29+8594delT
c.-29+8594delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2944351
chrY:2944700 C
C
 T
T
 3 a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0054
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0054
 3 HG01099.hp1
HG03579.hp1
HG03710.hp1
HG01099.hp1
HG03579.hp1
HG03710.hp1
 intron_variant MODIFIER c.-29+8931C>T
c.-29+8931C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2944700
chrY:2944736 A
A
 AT
AT
 11 a0001c0001t0001g0015
a0001c0001t0001g0023
a0001c0001t0001g0114
others(8): Show 
a0001c0001t0001g0015
a0001c0001t0001g0023
a0001c0001t0001g0114
a0001c0001t0001g0131
a0001c0001t0002g0028
a0001c0001t0002g0083
a0001c0001t0002g0084
a0001c0001t0002g0092
a0001c0001t0002g0093
a0001c0001t0002g0094
a0001c0001t0002g0095
 11 HG01109.hp1
HG01358.hp1
HG01928.hp1
others(8): Show 
HG01109.hp1
HG01358.hp1
HG01928.hp1
HG02698.hp1
HG02738.hp1
HG03492.hp1
HG04204.hp1
HG04228.hp1
NA18966.hp1
NA18967.hp1
NA18990.hp1
 intron_variant MODIFIER c.-29+8997dupT
c.-29+8997dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2944736
chrY:2944736 AT
AT
 A
A
 65 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0004
others(62): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0019
a0001c0001t0001g0025
a0001c0001t0001g0029
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0055
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0130
a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0002t0001g0034
a0002c0003t0001g0011
 65 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(62): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00673.hp1
HG01069.hp1
HG01074.hp1
HG01167.hp1
HG01192.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02135.hp1
HG02145.hp1
HG02486.hp1
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02735.hp1
HG02965.hp1
HG03139.hp1
HG03209.hp1
HG03471.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18945.hp1
NA18959.hp1
NA18962.hp1
NA18971.hp1
NA18974.hp1
NA18982.hp1
NA18984.hp1
NA18986.hp1
NA18989.hp1
NA18994.hp1
NA19000.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19060.hp1
NA19062.hp1
NA19066.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19079.hp1
NA19086.hp1
NA19088.hp1
NA19091.hp1
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.-29+8997delT
c.-29+8997delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2944736
chrY:2944736 ATT
ATT
 A
A
 3 a0001c0001t0001g0122
a0001c0001t0004g0096
a0001c0001t0006g0020
a0001c0001t0001g0122
a0001c0001t0004g0096
a0001c0001t0006g0020
 3 HG02895.hp1
HG03225.hp1
NA19043.hp1
HG02895.hp1
HG03225.hp1
NA19043.hp1
 intron_variant MODIFIER c.-29+8996_-29+8997d
others(4): Show 
c.-29+8996_-29+8997delTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2944736
chrY:2944736 ATTT
ATTT
 A
A
 1 a0001c0001t0001g0003
a0001c0001t0001g0003
 1 NA18953.hp1
NA18953.hp1
 intron_variant MODIFIER c.-29+8995_-29+8997d
others(5): Show 
c.-29+8995_-29+8997delTTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2944736
chrY:2944736 ATTTTTTT
others(5): Show 
ATTTTTTTTTTTT
 A
A
 1 a0001c0001t0001g0121
a0001c0001t0001g0121
 1 HG03130.hp1
HG03130.hp1
 intron_variant MODIFIER c.-29+8986_-29+8997d
others(14): Show 
c.-29+8986_-29+8997delTTTTTTTTTTTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2944736
chrY:2945297 AT
AT
 A
A
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-8606delT
c.-28-8606delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2945297
chrY:2945369 CT
CT
 C
C
 1 a0001c0001t0001g0017
a0001c0001t0001g0017
 1 NA19000.hp1
NA19000.hp1
 intron_variant MODIFIER c.-28-8530delT
c.-28-8530delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2945369
chrY:2945620 G
G
 C
C
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-8289G>C
c.-28-8289G>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2945620
chrY:2945621 C
C
 G
G
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-8288C>G
c.-28-8288C>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2945621
chrY:2945716 TC
TC
 T
T
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-8191delC
c.-28-8191delC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2945716
chrY:2945755 C
C
 CA
CA
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-8153dupA
c.-28-8153dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2945755
chrY:2945831 CA
CA
 C
C
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-8075delA
c.-28-8075delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2945831
chrY:2945951 AT
AT
 A
A
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-7956delT
c.-28-7956delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2945951
chrY:2946008 CT
CT
 C
C
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-7895delT
c.-28-7895delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946008
chrY:2946050 AT
AT
 A
A
 1 a0001c0001t0001g0039
a0001c0001t0001g0039
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.-28-7853delT
c.-28-7853delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946050
chrY:2946117 AG
AG
 A
A
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-7790delG
c.-28-7790delG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946117
chrY:2946187 CA
CA
 C
C
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-7720delA
c.-28-7720delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946187
chrY:2946713 TG
TG
 T
T
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-7193delG
c.-28-7193delG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946713
chrY:2946727 TG
TG
 T
T
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-7180delG
c.-28-7180delG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946727
chrY:2946836 T
T
 TA
TA
 12 a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
others(9): Show 
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
 12 HG02055.hp1
HG02145.hp1
HG02258.hp1
others(9): Show 
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03471.hp1
NA18522.hp1
 intron_variant MODIFIER c.-28-7059dupA
c.-28-7059dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946836
chrY:2946836 TA
TA
 T
T
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-7059delA
c.-28-7059delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2946836
chrY:2947094 GC
GC
 G
G
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-6813delC
c.-28-6813delC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2947094
chrY:2947262 C
C
 G
G
 2 a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0001t0003g0044
a0001c0001t0003g0062
 2 HG00609.hp1
NA18982.hp1
HG00609.hp1
NA18982.hp1
 intron_variant MODIFIER c.-28-6647C>G
c.-28-6647C>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2947262
chrY:2947265 G
G
 C
C
 1 a0001c0001t0001g0069
a0001c0001t0001g0069
 1 NA18612.hp1
NA18612.hp1
 intron_variant MODIFIER c.-28-6644G>C
c.-28-6644G>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2947265
chrY:2947556 ATGACT
ATGACT
 A
A
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.-28-6352_-28-6348d
others(7): Show 
c.-28-6352_-28-6348delTGACT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2947556
chrY:2947593 G
G
 GT
GT
 1 a0001c0001t0001g0130
a0001c0001t0001g0130
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.-28-6310dupT
c.-28-6310dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2947593
chrY:2947653 A
A
 G
G
 1 a0001c0001t0001g0054
a0001c0001t0001g0054
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.-28-6256A>G
c.-28-6256A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2947653
chrY:2947766 T
T
 TA
TA
 1 a0001c0001t0001g0130
a0001c0001t0001g0130
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.-28-6143_-28-6142i
others(3): Show 
c.-28-6143_-28-6142insA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2947766
chrY:2948646 T
T
 C
C
 1 a0001c0001t0001g0038
a0001c0001t0001g0038
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.-28-5263T>C
c.-28-5263T>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2948646
chrY:2948950 G
G
 A
A
 1 a0001c0001t0001g0052
a0001c0001t0001g0052
 1 HG01433.hp1
HG01433.hp1
 intron_variant MODIFIER c.-28-4959G>A
c.-28-4959G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2948950
chrY:2949388 G
G
 C
C
 109 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(106): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0019
a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0001t0004g0096
a0001c0001t0005g0022
a0001c0001t0006g0020
a0001c0002t0001g0034
a0002c0003t0001g0011
 109 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(106): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG01069.hp1
HG01074.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02735.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03579.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-28-4521G>C
c.-28-4521G>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2949388
chrY:2949668 C
C
 CA
CA
 1 a0001c0001t0001g0033
a0001c0001t0001g0033
 1 HG02735.hp1
HG02735.hp1
 intron_variant MODIFIER c.-28-4211dupA
c.-28-4211dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2949668
chrY:2949668 CA
CA
 C
C
 98 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(95): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0018
a0001c0001t0001g0019
a0001c0001t0001g0021
a0001c0001t0001g0025
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0055
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0130
a0001c0001t0002g0026
a0001c0001t0002g0027
a0001c0001t0002g0079
a0001c0001t0002g0084
a0001c0001t0002g0085
a0001c0001t0002g0088
a0001c0001t0002g0090
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0093
a0001c0001t0002g0094
a0001c0001t0002g0095
a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0001t0004g0096
a0001c0001t0005g0022
a0002c0003t0001g0011
 98 HG00280.hp1
HG00609.hp1
HG00621.hp1
others(95): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG01069.hp1
HG01074.hp1
HG01099.hp1
HG01167.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG01928.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02572.hp1
HG02602.hp1
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03017.hp1
HG03098.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03490.hp1
HG03492.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18966.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19012.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19083.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-28-4211delA
c.-28-4211delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2949668
chrY:2950534 G
G
 A
A
 3 a0001c0001t0001g0030
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0030
a0001c0001t0001g0050
a0001c0001t0001g0051
 3 HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
 intron_variant MODIFIER c.-28-3375G>A
c.-28-3375G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2950534
chrY:2950643 G
G
 T
T
 2 a0001c0001t0001g0102
a0001c0001t0001g0110
a0001c0001t0001g0102
a0001c0001t0001g0110
 2 NA18995.hp1
NA19063.hp1
NA18995.hp1
NA19063.hp1
 intron_variant MODIFIER c.-28-3266G>T
c.-28-3266G>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2950643
chrY:2950662 A
A
 G
G
 1 a0001c0001t0001g0115
a0001c0001t0001g0115
 1 NA18988.hp1
NA18988.hp1
 intron_variant MODIFIER c.-28-3247A>G
c.-28-3247A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2950662
chrY:2950782 A
A
 G
G
 3 a0001c0001t0001g0101
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0101
a0001c0001t0001g0105
a0001c0001t0001g0106
 3 NA18940.hp1
NA18955.hp1
NA19056.hp1
NA18940.hp1
NA18955.hp1
NA19056.hp1
 intron_variant MODIFIER c.-28-3127A>G
c.-28-3127A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2950782
chrY:2950996 G
G
 A
A
 4 a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0074
others(1): Show 
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0074
a0001c0001t0001g0075
 4 NA18971.hp1
NA18974.hp1
NA18989.hp1
others(1): Show 
NA18971.hp1
NA18974.hp1
NA18989.hp1
NA19006.hp1
 intron_variant MODIFIER c.-28-2913G>A
c.-28-2913G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2950996
chrY:2951213 G
G
 T
T
 2 a0001c0001t0001g0102
a0001c0001t0001g0110
a0001c0001t0001g0102
a0001c0001t0001g0110
 2 NA18995.hp1
NA19063.hp1
NA18995.hp1
NA19063.hp1
 intron_variant MODIFIER c.-28-2696G>T
c.-28-2696G>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2951213
chrY:2951919 C
C
 CT
CT
 2 a0001c0001t0001g0098
a0001c0001t0001g0117
a0001c0001t0001g0098
a0001c0001t0001g0117
 2 NA19058.hp1
NA19076.hp1
NA19058.hp1
NA19076.hp1
 intron_variant MODIFIER c.-28-1973dupT
c.-28-1973dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2951919
chrY:2951919 CT
CT
 C
C
 2 a0001c0001t0001g0010
a0001c0001t0001g0035
a0001c0001t0001g0010
a0001c0001t0001g0035
 2 NA18945.hp1
NA18985.hp1
NA18945.hp1
NA18985.hp1
 intron_variant MODIFIER c.-28-1973delT
c.-28-1973delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2951919
chrY:2952043 C
C
 T
T
 1 a0001c0001t0006g0020
a0001c0001t0006g0020
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.-28-1866C>T
c.-28-1866C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2952043
chrY:2952889 A
A
 G
G
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.-28-1020A>G
c.-28-1020A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2952889
chrY:2953336 C
C
 CA
CA
 9 a0001c0001t0001g0021
a0001c0001t0001g0030
a0001c0001t0001g0048
others(6): Show 
a0001c0001t0001g0021
a0001c0001t0001g0030
a0001c0001t0001g0048
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0073
a0001c0001t0001g0098
a0001c0001t0001g0112
a0001c0001t0001g0131
 9 HG00621.hp1
HG01255.hp1
HG01256.hp1
others(6): Show 
HG00621.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG02074.hp1
NA18967.hp1
NA19068.hp1
NA19076.hp1
NA19079.hp1
 intron_variant MODIFIER c.-28-556dupA
c.-28-556dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 INFO_REALIGN_3_PRIME chrY 2953336
chrY:2953745 G
G
 C
C
 18 a0001c0001t0001g0021
a0001c0001t0001g0029
a0001c0001t0001g0035
others(15): Show 
a0001c0001t0001g0021
a0001c0001t0001g0029
a0001c0001t0001g0035
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0047
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0067
a0001c0001t0001g0098
a0001c0001t0003g0044
a0001c0001t0003g0062
 18 HG00609.hp1
HG00621.hp1
HG00673.hp1
others(15): Show 
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG02027.hp1
HG02056.hp1
HG02071.hp1
HG02129.hp1
HG02135.hp1
NA18945.hp1
NA18959.hp1
NA18982.hp1
NA18984.hp1
NA19062.hp1
NA19072.hp1
NA19076.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
 intron_variant MODIFIER c.-28-164G>C
c.-28-164G>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 1/7 chrY 2953745
chrY:2954699 A
A
 AAAAT
AAAAT
 16 a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0023
others(13): Show 
a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0023
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0068
a0001c0001t0001g0071
a0001c0001t0001g0076
a0001c0001t0001g0104
a0001c0001t0002g0026
a0001c0001t0002g0028
a0001c0001t0002g0084
a0001c0001t0002g0092
a0001c0001t0002g0094
 16 HG01074.hp1
HG01109.hp1
HG01192.hp1
others(13): Show 
HG01074.hp1
HG01109.hp1
HG01192.hp1
HG02572.hp1
HG02647.hp1
HG02738.hp1
HG03490.hp1
HG03492.hp1
HG03688.hp1
HG03942.hp1
HG04204.hp1
HG04228.hp1
NA18961.hp1
NA18974.hp1
NA18994.hp1
NA19083.hp1
 intron_variant MODIFIER c.61+746_61+749dupTA
others(2): Show 
c.61+746_61+749dupTAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2954699
chrY:2954699 A
A
 AAAATAAA
others(1): Show 
AAAATAAAT
 3 a0001c0001t0001g0109
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0001g0109
a0001c0001t0002g0088
a0001c0001t0002g0091
 3 HG02602.hp1
HG04115.hp1
NA18960.hp1
HG02602.hp1
HG04115.hp1
NA18960.hp1
 intron_variant MODIFIER c.61+742_61+749dupTA
others(6): Show 
c.61+742_61+749dupTAAATAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2954699
chrY:2954699 AAAAT
AAAAT
 A
A
 9 a0001c0001t0001g0046
a0001c0001t0001g0048
a0001c0001t0001g0053
others(6): Show 
a0001c0001t0001g0046
a0001c0001t0001g0048
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0057
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0126
a0001c0001t0004g0096
 9 HG02074.hp1
HG02083.hp1
HG02486.hp1
others(6): Show 
HG02074.hp1
HG02083.hp1
HG02486.hp1
HG02965.hp1
HG03139.hp1
HG03225.hp1
HG03579.hp1
NA19009.hp1
NA20905.hp1
 intron_variant MODIFIER c.61+746_61+749delTA
others(2): Show 
c.61+746_61+749delTAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2954699
chrY:2956122 G
G
 A
A
 2 a0001c0001t0001g0099
a0001c0001t0001g0114
a0001c0001t0001g0099
a0001c0001t0001g0114
 2 NA18966.hp1
NA19089.hp1
NA18966.hp1
NA19089.hp1
 intron_variant MODIFIER c.61+2125G>A
c.61+2125G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2956122
chrY:2956685 A
A
 AC
AC
 88 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(85): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0029
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0042
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0048
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0002g0026
a0001c0001t0002g0028
a0001c0001t0002g0077
a0001c0001t0002g0080
a0001c0001t0002g0081
a0001c0001t0002g0082
a0001c0001t0002g0083
a0001c0001t0002g0084
a0001c0001t0002g0086
a0001c0001t0002g0088
a0001c0001t0002g0089
a0001c0001t0002g0090
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0093
a0001c0001t0002g0094
a0001c0001t0004g0096
a0001c0001t0005g0022
 88 HG00140.hp1
HG00621.hp1
HG00673.hp1
others(85): Show 
HG00140.hp1
HG00621.hp1
HG00673.hp1
HG00738.hp1
HG01074.hp1
HG01099.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01358.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02738.hp1
HG02895.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03490.hp1
HG03492.hp1
HG03579.hp1
HG03654.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18962.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18977.hp1
NA18983.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19007.hp1
NA19012.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20752.hp1
 intron_variant MODIFIER c.61+2698dupC
c.61+2698dupC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2956685
chrY:2956685 A
A
 ACC
ACC
 9 a0001c0001t0001g0004
a0001c0001t0001g0006
a0001c0001t0001g0014
others(6): Show 
a0001c0001t0001g0004
a0001c0001t0001g0006
a0001c0001t0001g0014
a0001c0001t0001g0024
a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0098
a0001c0001t0002g0078
a0001c0001t0002g0095
 9 HG01106.hp1
HG01261.hp1
HG02698.hp1
others(6): Show 
HG01106.hp1
HG01261.hp1
HG02698.hp1
NA18965.hp1
NA18971.hp1
NA18974.hp1
NA19005.hp1
NA19067.hp1
NA19076.hp1
 intron_variant MODIFIER c.61+2697_61+2698dup
others(2): Show 
c.61+2697_61+2698dupCC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2956685
chrY:2956685 A
A
 ACCC
ACCC
 3 a0001c0001t0001g0072
a0001c0001t0001g0075
a0001c0001t0002g0085
a0001c0001t0001g0072
a0001c0001t0001g0075
a0001c0001t0002g0085
 3 HG00642.hp1
NA18989.hp1
NA19006.hp1
HG00642.hp1
NA18989.hp1
NA19006.hp1
 intron_variant MODIFIER c.61+2696_61+2698dup
others(3): Show 
c.61+2696_61+2698dupCCC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2956685
chrY:2956685 A
A
 ACCCC
ACCCC
 1 a0001c0001t0001g0019
a0001c0001t0001g0019
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.61+2695_61+2698dup
others(4): Show 
c.61+2695_61+2698dupCCCC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2956685
chrY:2956685 A
A
 ACCCCC
ACCCCC
 1 a0001c0001t0006g0020
a0001c0001t0006g0020
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.61+2694_61+2698dup
others(5): Show 
c.61+2694_61+2698dupCCCCC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2956685
chrY:2956685 AC
AC
 A
A
 7 a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
others(4): Show 
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0050
a0001c0001t0001g0053
a0001c0002t0001g0034
 7 HG01069.hp1
HG01255.hp1
HG01256.hp1
others(4): Show 
HG01069.hp1
HG01255.hp1
HG01256.hp1
HG02735.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.61+2698delC
c.61+2698delC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2956685
chrY:2956713 A
A
 C
C
 1 a0001c0001t0001g0029
a0001c0001t0001g0029
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.61+2716A>C
c.61+2716A>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2956713
chrY:2957165 G
G
 GT
GT
 2 a0001c0001t0001g0010
a0001c0001t0001g0061
a0001c0001t0001g0010
a0001c0001t0001g0061
 2 HG02056.hp1
NA18985.hp1
HG02056.hp1
NA18985.hp1
 intron_variant MODIFIER c.61+3180dupT
c.61+3180dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2957165
chrY:2958146 T
T
 A
A
 12 a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
others(9): Show 
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
 12 HG02055.hp1
HG02145.hp1
HG02258.hp1
others(9): Show 
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03471.hp1
NA18522.hp1
 intron_variant MODIFIER c.62-2928T>A
c.62-2928T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2958146
chrY:2958665 A
A
 G
G
 1 a0001c0001t0001g0063
a0001c0001t0001g0063
 1 NA19083.hp1
NA19083.hp1
 intron_variant MODIFIER c.62-2409A>G
c.62-2409A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2958665
chrY:2959357 C
C
 T
T
 12 a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
others(9): Show 
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
 12 HG02055.hp1
HG02145.hp1
HG02258.hp1
others(9): Show 
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03471.hp1
NA18522.hp1
 intron_variant MODIFIER c.62-1717C>T
c.62-1717C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2959357
chrY:2959368 C
C
 T
T
 3 a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0065
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0065
 3 HG01074.hp1
HG01106.hp1
HG01109.hp1
HG01074.hp1
HG01106.hp1
HG01109.hp1
 intron_variant MODIFIER c.62-1706C>T
c.62-1706C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2959368
chrY:2959868 CT
CT
 C
C
 18 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(15): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0043
a0001c0001t0001g0067
a0001c0002t0001g0034
 18 HG02129.hp1
NA18943.hp1
NA18953.hp1
others(15): Show 
HG02129.hp1
NA18943.hp1
NA18953.hp1
NA18962.hp1
NA18965.hp1
NA18977.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19000.hp1
NA19005.hp1
NA19060.hp1
NA19066.hp1
NA19067.hp1
NA19088.hp1
NA20805.hp1
 intron_variant MODIFIER c.62-1189delT
c.62-1189delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2959868
chrY:2960155 T
T
 C
C
 14 a0001c0001t0001g0021
a0001c0001t0001g0029
a0001c0001t0001g0035
others(11): Show 
a0001c0001t0001g0021
a0001c0001t0001g0029
a0001c0001t0001g0035
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0047
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0098
 14 HG00621.hp1
HG00673.hp1
HG02056.hp1
others(11): Show 
HG00621.hp1
HG00673.hp1
HG02056.hp1
HG02071.hp1
HG02129.hp1
HG02135.hp1
NA18945.hp1
NA18959.hp1
NA19062.hp1
NA19072.hp1
NA19076.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
 intron_variant MODIFIER c.62-919T>C
c.62-919T>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2960155
chrY:2960384 A
A
 G
G
 21 a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
others(18): Show 
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0131
 21 NA18940.hp1
NA18944.hp1
NA18948.hp1
others(18): Show 
NA18940.hp1
NA18944.hp1
NA18948.hp1
NA18952.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18983.hp1
NA18988.hp1
NA18995.hp1
NA19004.hp1
NA19012.hp1
NA19056.hp1
NA19058.hp1
NA19063.hp1
NA19068.hp1
NA19082.hp1
NA19089.hp1
 intron_variant MODIFIER c.62-690A>G
c.62-690A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 chrY 2960384
chrY:2960580 GA
GA
 G
G
 1 a0001c0001t0003g0062
a0001c0001t0003g0062
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.62-482delA
c.62-482delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 2/7 INFO_REALIGN_3_PRIME chrY 2960580
chrY:2962586 G
G
 T
T
 1 a0001c0001t0001g0059
a0001c0001t0001g0059
 1 HG02027.hp1
HG02027.hp1
 intron_variant MODIFIER c.634+940G>T
c.634+940G>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962586
chrY:2962751 C
C
 G
G
 1 a0001c0001t0001g0045
a0001c0001t0001g0045
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.634+1105C>G
c.634+1105C>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962751
chrY:2962917 T
T
 TAAAAAAT
others(119): Show 
TAAAAAATTTCAATACCTTAAAAAAAAAATTCTTCAAAAAGATAAAAAAA
ACCAAAAGAAAAACAAAAAAAATATAAAGTAAAAATAAAAACAAGCAAAA
AAAAATAAATAAGATTAAATCATATAA
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1272_634+1273i
others(128): Show 
c.634+1272_634+1273insAAAAATTTCAATACCTTAAAAAAAAAAT
TCTTCAAAAAGATAAAAAAAACCAAAAGAAAAACAAAAAAAATATAAAGT
AAAAATAAAAACAAGCAAAAAAAAATAAATAAGATTAAATCATATAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2962917
chrY:2962919 G
G
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1273G>A
c.634+1273G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962919
chrY:2962920 C
C
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1274C>A
c.634+1274C>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962920
chrY:2962924 T
T
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1278T>A
c.634+1278T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962924
chrY:2962952 T
T
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1306T>A
c.634+1306T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962952
chrY:2962954 T
T
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1308T>A
c.634+1308T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962954
chrY:2962956 C
C
 CTATCAT
CTATCAT
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1310_634+1311i
others(8): Show 
c.634+1310_634+1311insTATCAT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962956
chrY:2962968 T
T
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1322T>A
c.634+1322T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962968
chrY:2962971 ACTCT
ACTCT
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1327_634+1330d
others(6): Show 
c.634+1327_634+1330delTCTC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2962971
chrY:2962976 C
C
 T
T
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.634+1330C>T
c.634+1330C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2962976
chrY:2963071 G
G
 A
A
 7 a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
others(4): Show 
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0127
a0001c0001t0001g0129
a0001c0001t0001g0130
 7 HG02055.hp1
HG02145.hp1
HG02258.hp1
others(4): Show 
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02895.hp1
HG03130.hp1
HG03209.hp1
NA18522.hp1
 intron_variant MODIFIER c.634+1425G>A
c.634+1425G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2963071
chrY:2963307 A
A
 G
G
 1 a0001c0001t0001g0031
a0001c0001t0001g0031
 1 homoSapiens_chm13v2.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.634+1661A>G
c.634+1661A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2963307
chrY:2963334 T
T
 C
C
 2 a0001c0001t0001g0064
a0001c0001t0005g0022
a0001c0001t0001g0064
a0001c0001t0005g0022
 2 HG02572.hp1
HG03098.hp1
HG02572.hp1
HG03098.hp1
 intron_variant MODIFIER c.634+1688T>C
c.634+1688T>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2963334
chrY:2963398 G
G
 T
T
 4 a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0074
others(1): Show 
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0074
a0001c0001t0001g0075
 4 NA18971.hp1
NA18974.hp1
NA18989.hp1
others(1): Show 
NA18971.hp1
NA18974.hp1
NA18989.hp1
NA19006.hp1
 intron_variant MODIFIER c.634+1752G>T
c.634+1752G>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2963398
chrY:2963535 T
T
 G
G
 1 a0001c0001t0001g0114
a0001c0001t0001g0114
 1 NA18966.hp1
NA18966.hp1
 intron_variant MODIFIER c.634+1889T>G
c.634+1889T>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2963535
chrY:2963888 AAT
AAT
 A
A
 1 a0001c0001t0001g0019
a0001c0001t0001g0019
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.634+2255_634+2256d
others(4): Show 
c.634+2255_634+2256delAT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2963888
chrY:2964588 A
A
 AT
AT
 1 a0001c0001t0001g0066
a0001c0001t0001g0066
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.634+2947dupT
c.634+2947dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2964588
chrY:2964590 T
T
 A
A
 1 a0001c0001t0001g0127
a0001c0001t0001g0127
 1 NA18522.hp1
NA18522.hp1
 intron_variant MODIFIER c.634+2944T>A
c.634+2944T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2964590
chrY:2964739 G
G
 C
C
 6 a0001c0001t0001g0121
a0001c0001t0001g0123
a0001c0001t0001g0124
others(3): Show 
a0001c0001t0001g0121
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0127
a0001c0001t0001g0129
a0001c0001t0001g0130
 6 HG02055.hp1
HG02145.hp1
HG02258.hp1
others(3): Show 
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG03130.hp1
HG03209.hp1
NA18522.hp1
 intron_variant MODIFIER c.634+3093G>C
c.634+3093G>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2964739
chrY:2964866 T
T
 C
C
 2 a0001c0001t0001g0049
a0001c0001t0001g0060
a0001c0001t0001g0049
a0001c0001t0001g0060
 2 HG00280.hp1
NA18747.hp1
HG00280.hp1
NA18747.hp1
 intron_variant MODIFIER c.634+3220T>C
c.634+3220T>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2964866
chrY:2965137 C
C
 CT
CT
 6 a0001c0001t0001g0106
a0001c0001t0001g0125
a0001c0001t0001g0131
others(3): Show 
a0001c0001t0001g0106
a0001c0001t0001g0125
a0001c0001t0001g0131
a0001c0001t0002g0028
a0001c0001t0002g0085
a0001c0001t0002g0088
 6 HG00642.hp1
HG02738.hp1
HG03471.hp1
others(3): Show 
HG00642.hp1
HG02738.hp1
HG03471.hp1
HG04115.hp1
NA18940.hp1
NA18967.hp1
 intron_variant MODIFIER c.634+3510dupT
c.634+3510dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2965137
chrY:2965327 T
T
 A
A
 1 a0001c0001t0001g0121
a0001c0001t0001g0121
 1 HG03130.hp1
HG03130.hp1
 intron_variant MODIFIER c.634+3681T>A
c.634+3681T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2965327
chrY:2966254 CAT
CAT
 C
C
 3 a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
 3 NA18612.hp1
NA19079.hp1
NA19091.hp1
NA18612.hp1
NA19079.hp1
NA19091.hp1
 intron_variant MODIFIER c.634+4609_634+4610d
others(4): Show 
c.634+4609_634+4610delAT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2966254
chrY:2966371 A
A
 C
C
 1 a0001c0001t0003g0062
a0001c0001t0003g0062
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.634+4725A>C
c.634+4725A>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2966371
chrY:2966828 CT
CT
 C
C
 48 a0001c0001t0001g0019
a0001c0001t0001g0023
a0001c0001t0001g0024
others(45): Show 
a0001c0001t0001g0019
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0004g0096
a0001c0001t0005g0022
a0001c0001t0006g0020
 48 HG01074.hp1
HG01106.hp1
HG01109.hp1
others(45): Show 
HG01074.hp1
HG01106.hp1
HG01109.hp1
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA18522.hp1
NA18612.hp1
NA18940.hp1
NA18944.hp1
NA18948.hp1
NA18952.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18983.hp1
NA18988.hp1
NA18989.hp1
NA18995.hp1
NA19004.hp1
NA19006.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp1
NA19058.hp1
NA19063.hp1
NA19068.hp1
NA19079.hp1
NA19082.hp1
NA19089.hp1
NA19091.hp1
 intron_variant MODIFIER c.634+5197delT
c.634+5197delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2966828
chrY:2967566 C
C
 CT
CT
 2 a0001c0001t0001g0098
a0001c0001t0001g0102
a0001c0001t0001g0098
a0001c0001t0001g0102
 2 NA19063.hp1
NA19076.hp1
NA19063.hp1
NA19076.hp1
 intron_variant MODIFIER c.634+5936dupT
c.634+5936dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2967566
chrY:2968309 C
C
 CT
CT
 2 a0001c0001t0001g0075
a0001c0001t0006g0020
a0001c0001t0001g0075
a0001c0001t0006g0020
 2 NA18989.hp1
NA19043.hp1
NA18989.hp1
NA19043.hp1
 intron_variant MODIFIER c.634+6682dupT
c.634+6682dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2968309
chrY:2968309 CT
CT
 C
C
 7 a0001c0001t0001g0046
a0001c0001t0001g0057
a0001c0001t0001g0071
others(4): Show 
a0001c0001t0001g0046
a0001c0001t0001g0057
a0001c0001t0001g0071
a0001c0001t0001g0102
a0001c0001t0001g0109
a0001c0001t0002g0090
a0001c0001t0002g0091
 7 HG02083.hp1
HG02602.hp1
HG03654.hp1
others(4): Show 
HG02083.hp1
HG02602.hp1
HG03654.hp1
NA18960.hp1
NA18974.hp1
NA19009.hp1
NA19063.hp1
 intron_variant MODIFIER c.634+6682delT
c.634+6682delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2968309
chrY:2968528 C
C
 T
T
 15 a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0065
others(12): Show 
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0065
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
 15 HG01074.hp1
HG01106.hp1
HG01109.hp1
others(12): Show 
HG01074.hp1
HG01106.hp1
HG01109.hp1
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG02895.hp1
HG02965.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03471.hp1
NA18522.hp1
 intron_variant MODIFIER c.635-6567C>T
c.635-6567C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2968528
chrY:2968618 C
C
 T
T
 1 a0001c0001t0001g0107
a0001c0001t0001g0107
 1 NA19004.hp1
NA19004.hp1
 intron_variant MODIFIER c.635-6477C>T
c.635-6477C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2968618
chrY:2969554 G
G
 A
A
 3 a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0073
 3 NA18612.hp1
NA19079.hp1
NA19091.hp1
NA18612.hp1
NA19079.hp1
NA19091.hp1
 intron_variant MODIFIER c.635-5541G>A
c.635-5541G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2969554
chrY:2969620 A
A
 T
T
 1 a0001c0001t0001g0019
a0001c0001t0001g0019
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.635-5475A>T
c.635-5475A>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2969620
chrY:2969679 C
C
 CT
CT
 1 a0001c0001t0001g0104
a0001c0001t0001g0104
 1 NA18961.hp1
NA18961.hp1
 intron_variant MODIFIER c.635-5407dupT
c.635-5407dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2969679
chrY:2971010 C
C
 T
T
 2 a0001c0001t0001g0064
a0001c0001t0005g0022
a0001c0001t0001g0064
a0001c0001t0005g0022
 2 HG02572.hp1
HG03098.hp1
HG02572.hp1
HG03098.hp1
 intron_variant MODIFIER c.635-4085C>T
c.635-4085C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2971010
chrY:2972020 C
C
 T
T
 1 a0001c0001t0002g0085
a0001c0001t0002g0085
 1 HG00642.hp1
HG00642.hp1
 intron_variant MODIFIER c.635-3075C>T
c.635-3075C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2972020
chrY:2972058 C
C
 CA
CA
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-3017dupA
c.635-3017dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2972058
chrY:2972058 CA
CA
 C
C
 4 a0001c0001t0001g0032
a0001c0001t0001g0037
a0001c0001t0001g0040
others(1): Show 
a0001c0001t0001g0032
a0001c0001t0001g0037
a0001c0001t0001g0040
a0001c0001t0002g0079
 4 HG01069.hp1
HG01167.hp1
HG03017.hp1
others(1): Show 
HG01069.hp1
HG01167.hp1
HG03017.hp1
NA18959.hp1
 intron_variant MODIFIER c.635-3017delA
c.635-3017delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2972058
chrY:2972260 G
G
 A
A
 1 a0001c0001t0005g0022
a0001c0001t0005g0022
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.635-2835G>A
c.635-2835G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2972260
chrY:2973063 C
C
 CT
CT
 2 a0001c0001t0001g0099
a0001c0001t0002g0088
a0001c0001t0001g0099
a0001c0001t0002g0088
 2 HG04115.hp1
NA19089.hp1
HG04115.hp1
NA19089.hp1
 intron_variant MODIFIER c.635-2015dupT
c.635-2015dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2973063
chrY:2973201 A
A
 G
G
 1 a0001c0001t0004g0096
a0001c0001t0004g0096
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.635-1894A>G
c.635-1894A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2973201
chrY:2973212 T
T
 G
G
 2 a0001c0001t0001g0064
a0001c0001t0005g0022
a0001c0001t0001g0064
a0001c0001t0005g0022
 2 HG02572.hp1
HG03098.hp1
HG02572.hp1
HG03098.hp1
 intron_variant MODIFIER c.635-1883T>G
c.635-1883T>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2973212
chrY:2973962 CT
CT
 C
C
 2 a0001c0001t0001g0001
a0001c0001t0001g0071
a0001c0001t0001g0001
a0001c0001t0001g0071
 2 NA18962.hp1
NA18974.hp1
NA18962.hp1
NA18974.hp1
 intron_variant MODIFIER c.635-1119delT
c.635-1119delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2973962
chrY:2974108 TA
TA
 T
T
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-982delA
c.635-982delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2974108
chrY:2974169 T
T
 TTTTA
TTTTA
 1 a0001c0001t0001g0042
a0001c0001t0001g0042
 1 HG02071.hp1
HG02071.hp1
 intron_variant MODIFIER c.635-925_635-924ins
others(4): Show 
c.635-925_635-924insTTAT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2974169
chrY:2974171 A
A
 T
T
 121 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(118): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0019
a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0002g0026
a0001c0001t0002g0027
a0001c0001t0002g0028
a0001c0001t0002g0084
a0001c0001t0002g0085
a0001c0001t0002g0088
a0001c0001t0002g0089
a0001c0001t0002g0090
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0093
a0001c0001t0002g0094
a0001c0001t0002g0095
a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0001t0004g0096
a0001c0001t0005g0022
a0001c0001t0006g0020
a0001c0002t0001g0034
a0002c0003t0001g0011
 121 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(118): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG01069.hp1
HG01074.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG01928.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03490.hp1
HG03492.hp1
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.635-924A>T
c.635-924A>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2974171
chrY:2974173 T
T
 A
A
 108 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
others(105): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0017
a0001c0001t0001g0018
a0001c0001t0001g0019
a0001c0001t0001g0021
a0001c0001t0001g0023
a0001c0001t0001g0024
a0001c0001t0001g0025
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0047
a0001c0001t0001g0048
a0001c0001t0001g0049
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0054
a0001c0001t0001g0055
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0065
a0001c0001t0001g0066
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0070
a0001c0001t0001g0071
a0001c0001t0001g0072
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0115
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0125
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0131
a0001c0001t0003g0044
a0001c0001t0003g0062
a0001c0001t0004g0096
a0001c0001t0005g0022
a0001c0001t0006g0020
a0001c0002t0001g0034
a0002c0003t0001g0011
 108 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(105): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG01069.hp1
HG01074.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01433.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02486.hp1
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02735.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03579.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19075.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.635-922T>A
c.635-922T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2974173
chrY:2974272 C
C
 CT
CT
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-823_635-822ins
others(1): Show 
c.635-823_635-822insT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2974272
chrY:2974286 AT
AT
 A
A
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-805delT
c.635-805delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2974286
chrY:2974389 TG
TG
 T
T
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-704delG
c.635-704delG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2974389
chrY:2974451 TG
TG
 T
T
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-641delG
c.635-641delG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2974451
chrY:2974477 G
G
 A
A
 1 a0001c0001t0001g0033
a0001c0001t0001g0033
 1 HG02735.hp1
HG02735.hp1
 intron_variant MODIFIER c.635-618G>A
c.635-618G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2974477
chrY:2974508 AT
AT
 A
A
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-583delT
c.635-583delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2974508
chrY:2974781 T
T
 C
C
 1 a0001c0001t0002g0086
a0001c0001t0002g0086
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.635-314T>C
c.635-314T>C
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2974781
chrY:2974789 G
G
 A
A
 1 a0001c0001t0001g0019
a0001c0001t0001g0019
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.635-306G>A
c.635-306G>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 chrY 2974789
chrY:2974831 T
T
 TC
TC
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-261dupC
c.635-261dupC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2974831
chrY:2975034 GT
GT
 G
G
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.635-57delT
c.635-57delT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 3/7 INFO_REALIGN_3_PRIME chrY 2975034
chrY:2975497 A
A
 G
G
 1 a0001c0001t0001g0054
a0001c0001t0001g0054
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.785-14A>G
c.785-14A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 4/7 chrY 2975497
chrY:2975667 TTA
TTA
 T
T
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.928+14_928+15delTA
c.928+14_928+15delTA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2975667
chrY:2975678 T
T
 A
A
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.928+24T>A
c.928+24T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2975678
chrY:2975954 T
T
 A
A
 1 a0001c0001t0001g0040
a0001c0001t0001g0040
 1 HG01167.hp1
HG01167.hp1
 intron_variant MODIFIER c.928+300T>A
c.928+300T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2975954
chrY:2975991 TG
TG
 T
T
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.928+338delG
c.928+338delG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2975991
chrY:2976102 AG
AG
 A
A
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.928+450delG
c.928+450delG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 INFO_REALIGN_3_PRIME chrY 2976102
chrY:2976108 G
G
 GT
GT
 2 a0001c0001t0002g0086
a0001c0001t0002g0088
a0001c0001t0002g0086
a0001c0001t0002g0088
 2 HG00738.hp1
HG04115.hp1
HG00738.hp1
HG04115.hp1
 intron_variant MODIFIER c.928+470dupT
c.928+470dupT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 INFO_REALIGN_3_PRIME chrY 2976108
chrY:2976108 G
G
 GTT
GTT
 1 a0001c0001t0006g0020
a0001c0001t0006g0020
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.928+469_928+470dup
others(2): Show 
c.928+469_928+470dupTT
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 INFO_REALIGN_3_PRIME chrY 2976108
chrY:2976132 A
A
 AG
AG
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.928+479dupG
c.928+479dupG
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 INFO_REALIGN_3_PRIME chrY 2976132
chrY:2976231 TC
TC
 T
T
 1 a0002c0003t0001g0011
a0002c0003t0001g0011
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.929-436delC
c.929-436delC
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 INFO_REALIGN_3_PRIME chrY 2976231
chrY:2976595 T
T
 TA
TA
 1 a0001c0001t0004g0096
a0001c0001t0004g0096
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.929-75_929-74insA
c.929-75_929-74insA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2976595
chrY:2976596 C
C
 A
A
 1 a0001c0001t0004g0096
a0001c0001t0004g0096
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.929-74C>A
c.929-74C>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2976596
chrY:2976597 C
C
 A
A
 1 a0001c0001t0004g0096
a0001c0001t0004g0096
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.929-73C>A
c.929-73C>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2976597
chrY:2976598 T
T
 A
A
 1 a0001c0001t0004g0096
a0001c0001t0004g0096
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.929-72T>A
c.929-72T>A
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 5/7 chrY 2976598
chrY:2977180 C
C
 CA
CA
 21 a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0043
others(18): Show 
a0001c0001t0001g0037
a0001c0001t0001g0038
a0001c0001t0001g0043
a0001c0001t0001g0058
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0100
a0001c0001t0001g0104
a0001c0001t0001g0120
a0001c0001t0001g0122
a0001c0001t0001g0130
a0001c0001t0002g0027
a0001c0001t0002g0077
a0001c0001t0002g0080
a0001c0001t0002g0081
a0001c0001t0002g0082
a0001c0001t0002g0083
a0001c0001t0002g0095
a0001c0001t0005g0022
 21 HG01099.hp1
HG01192.hp1
HG01243.hp1
others(18): Show 
HG01099.hp1
HG01192.hp1
HG01243.hp1
HG01358.hp1
HG01934.hp1
HG01943.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02572.hp1
HG02698.hp1
HG02895.hp1
HG02965.hp1
HG03098.hp1
NA18959.hp1
NA18961.hp1
NA18970.hp1
NA18984.hp1
NA19083.hp1
NA20752.hp1
 intron_variant MODIFIER c.1081+396dupA
c.1081+396dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 C
C
 CAA
CAA
 28 a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0048
others(25): Show 
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0048
a0001c0001t0001g0061
a0001c0001t0001g0066
a0001c0001t0001g0069
a0001c0001t0001g0073
a0001c0001t0001g0099
a0001c0001t0001g0101
a0001c0001t0001g0103
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0119
a0001c0001t0001g0121
a0001c0001t0001g0123
a0001c0001t0001g0124
a0001c0001t0001g0126
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0002g0078
a0001c0001t0002g0085
a0001c0001t0003g0044
a0001c0001t0003g0062
 28 HG00609.hp1
HG00642.hp1
HG00673.hp1
others(25): Show 
HG00609.hp1
HG00642.hp1
HG00673.hp1
HG01106.hp1
HG01261.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02258.hp1
HG02486.hp1
HG02717.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03942.hp1
NA18522.hp1
NA18612.hp1
NA18940.hp1
NA18948.hp1
NA18952.hp1
NA18960.hp1
NA18966.hp1
NA18982.hp1
NA18983.hp1
NA19004.hp1
NA19056.hp1
NA19079.hp1
NA19089.hp1
 intron_variant MODIFIER c.1081+395_1081+396d
others(4): Show 
c.1081+395_1081+396dupAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 C
C
 CAAA
CAAA
 14 a0001c0001t0001g0042
a0001c0001t0001g0046
a0001c0001t0001g0057
others(11): Show 
a0001c0001t0001g0042
a0001c0001t0001g0046
a0001c0001t0001g0057
a0001c0001t0001g0059
a0001c0001t0001g0102
a0001c0001t0001g0105
a0001c0001t0001g0110
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0115
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0125
a0001c0001t0001g0131
 14 HG02027.hp1
HG02071.hp1
HG02083.hp1
others(11): Show 
HG02027.hp1
HG02071.hp1
HG02083.hp1
HG03471.hp1
NA18944.hp1
NA18955.hp1
NA18967.hp1
NA18988.hp1
NA18995.hp1
NA19009.hp1
NA19012.hp1
NA19058.hp1
NA19063.hp1
NA19068.hp1
 intron_variant MODIFIER c.1081+394_1081+396d
others(5): Show 
c.1081+394_1081+396dupAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 C
C
 CAAAA
CAAAA
 3 a0001c0001t0001g0018
a0001c0001t0001g0116
a0002c0003t0001g0011
a0001c0001t0001g0018
a0001c0001t0001g0116
a0002c0003t0001g0011
 3 NA18977.hp1
NA19075.hp1
NA19082.hp1
NA18977.hp1
NA19075.hp1
NA19082.hp1
 intron_variant MODIFIER c.1081+393_1081+396d
others(6): Show 
c.1081+393_1081+396dupAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 C
C
 CAAAAA
CAAAAA
 8 a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0005
others(5): Show 
a0001c0001t0001g0001
a0001c0001t0001g0002
a0001c0001t0001g0005
a0001c0001t0001g0009
a0001c0001t0001g0010
a0001c0001t0001g0012
a0001c0001t0001g0013
a0001c0001t0001g0017
 8 NA18943.hp1
NA18962.hp1
NA18985.hp1
others(5): Show 
NA18943.hp1
NA18962.hp1
NA18985.hp1
NA18986.hp1
NA19000.hp1
NA19007.hp1
NA19060.hp1
NA19066.hp1
 intron_variant MODIFIER c.1081+392_1081+396d
others(7): Show 
c.1081+392_1081+396dupAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 C
C
 CAAAAAA
CAAAAAA
 6 a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0006
others(3): Show 
a0001c0001t0001g0003
a0001c0001t0001g0004
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0015
a0001c0001t0001g0016
 6 NA18953.hp1
NA18965.hp1
NA18990.hp1
others(3): Show 
NA18953.hp1
NA18965.hp1
NA18990.hp1
NA18994.hp1
NA19005.hp1
NA19088.hp1
 intron_variant MODIFIER c.1081+391_1081+396d
others(8): Show 
c.1081+391_1081+396dupAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 C
C
 CAAAAAAA
CAAAAAAA
 1 a0001c0001t0001g0014
a0001c0001t0001g0014
 1 NA19067.hp1
NA19067.hp1
 intron_variant MODIFIER c.1081+390_1081+396d
others(9): Show 
c.1081+390_1081+396dupAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 C
C
 CAAAAAAA
others(4): Show 
CAAAAAAAAAAA
 1 a0001c0001t0001g0008
a0001c0001t0001g0008
 1 NA19070.hp1
NA19070.hp1
 intron_variant MODIFIER c.1081+386_1081+396d
others(13): Show 
c.1081+386_1081+396dupAAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CA
CA
 C
C
 13 a0001c0001t0001g0019
a0001c0001t0001g0030
a0001c0001t0001g0032
others(10): Show 
a0001c0001t0001g0019
a0001c0001t0001g0030
a0001c0001t0001g0032
a0001c0001t0001g0036
a0001c0001t0001g0041
a0001c0001t0001g0050
a0001c0001t0001g0054
a0001c0001t0001g0072
a0001c0001t0001g0074
a0001c0001t0002g0026
a0001c0001t0002g0088
a0001c0001t0002g0093
a0001c0001t0006g0020
 13 HG00140.hp1
HG01069.hp1
HG01255.hp1
others(10): Show 
HG00140.hp1
HG01069.hp1
HG01255.hp1
HG01256.hp1
HG01928.hp1
HG02647.hp1
HG03490.hp1
HG03579.hp1
HG03710.hp1
HG04115.hp1
NA18971.hp1
NA19006.hp1
NA19043.hp1
 intron_variant MODIFIER c.1081+396delA
c.1081+396delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CAAAAAAA
others(2): Show 
CAAAAAAAAA
 C
C
 1 a0001c0001t0001g0023
a0001c0001t0001g0023
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.1081+388_1081+396d
others(11): Show 
c.1081+388_1081+396delAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CAAAAAAA
others(3): Show 
CAAAAAAAAAA
 C
C
 1 a0001c0001t0001g0065
a0001c0001t0001g0065
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.1081+387_1081+396d
others(12): Show 
c.1081+387_1081+396delAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CAAAAAAA
others(4): Show 
CAAAAAAAAAAA
 C
C
 2 a0001c0001t0001g0097
a0001c0002t0001g0034
a0001c0001t0001g0097
a0001c0002t0001g0034
 2 HG02015.hp1
NA20805.hp1
HG02015.hp1
NA20805.hp1
 intron_variant MODIFIER c.1081+386_1081+396d
others(13): Show 
c.1081+386_1081+396delAAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CAAAAAAA
others(5): Show 
CAAAAAAAAAAAA
 C
C
 1 a0001c0001t0001g0033
a0001c0001t0001g0033
 1 HG02735.hp1
HG02735.hp1
 intron_variant MODIFIER c.1081+385_1081+396d
others(14): Show 
c.1081+385_1081+396delAAAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CAAAAAAA
others(6): Show 
CAAAAAAAAAAAAA
 C
C
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.1081+384_1081+396d
others(15): Show 
c.1081+384_1081+396delAAAAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CAAAAAAA
others(7): Show 
CAAAAAAAAAAAAAA
 C
C
 1 a0001c0001t0001g0060
a0001c0001t0001g0060
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.1081+383_1081+396d
others(16): Show 
c.1081+383_1081+396delAAAAAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977180 CAAAAAAA
others(14): Show 
CAAAAAAAAAAAAAAAAAAAAA
 C
C
 6 a0001c0001t0001g0021
a0001c0001t0001g0035
a0001c0001t0001g0039
others(3): Show 
a0001c0001t0001g0021
a0001c0001t0001g0035
a0001c0001t0001g0039
a0001c0001t0001g0047
a0001c0001t0001g0055
a0001c0001t0001g0056
 6 HG00621.hp1
NA18945.hp1
NA19062.hp1
others(3): Show 
HG00621.hp1
NA18945.hp1
NA19062.hp1
NA19072.hp1
NA19085.hp1
NA19086.hp1
 intron_variant MODIFIER c.1081+376_1081+396d
others(23): Show 
c.1081+376_1081+396delAAAAAAAAAAAAAAAAAAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977180
chrY:2977217 A
A
 G
G
 1 a0001c0001t0001g0036
a0001c0001t0001g0036
 1 HG03710.hp1
HG03710.hp1
 intron_variant MODIFIER c.1081+395A>G
c.1081+395A>G
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 chrY 2977217
chrY:2977780 C
C
 CA
CA
 37 a0001c0001t0001g0002
a0001c0001t0001g0012
a0001c0001t0001g0014
others(34): Show 
a0001c0001t0001g0002
a0001c0001t0001g0012
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0021
a0001c0001t0001g0029
a0001c0001t0001g0035
a0001c0001t0001g0039
a0001c0001t0001g0042
a0001c0001t0001g0043
a0001c0001t0001g0048
a0001c0001t0001g0058
a0001c0001t0001g0063
a0001c0001t0001g0064
a0001c0001t0001g0070
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0109
a0001c0001t0001g0111
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0115
a0001c0001t0001g0117
a0001c0001t0001g0118
a0001c0001t0001g0123
a0001c0001t0002g0028
a0001c0001t0002g0082
a0001c0001t0002g0092
a0001c0001t0002g0093
a0001c0001t0003g0044
 37 HG00609.hp1
HG00621.hp1
HG00673.hp1
others(34): Show 
HG00609.hp1
HG00621.hp1
HG00673.hp1
HG01243.hp1
HG01928.hp1
HG02055.hp1
HG02071.hp1
HG02074.hp1
HG02129.hp1
HG02135.hp1
HG02572.hp1
HG02738.hp1
HG04228.hp1
NA18940.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18955.hp1
NA18960.hp1
NA18970.hp1
NA18983.hp1
NA18988.hp1
NA18990.hp1
NA19004.hp1
NA19012.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19063.hp1
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19083.hp1
NA19086.hp1
NA19089.hp1
NA19091.hp1
 intron_variant MODIFIER c.1082-132dupA
c.1082-132dupA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977780
chrY:2977780 C
C
 CAA
CAA
 6 a0001c0001t0001g0104
a0001c0001t0001g0110
a0001c0001t0001g0114
others(3): Show 
a0001c0001t0001g0104
a0001c0001t0001g0110
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0131
a0001c0001t0005g0022
 6 HG03098.hp1
NA18961.hp1
NA18966.hp1
others(3): Show 
HG03098.hp1
NA18961.hp1
NA18966.hp1
NA18967.hp1
NA18995.hp1
NA19082.hp1
 intron_variant MODIFIER c.1082-133_1082-132d
others(4): Show 
c.1082-133_1082-132dupAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977780
chrY:2977780 CA
CA
 C
C
 3 a0001c0001t0001g0122
a0001c0001t0001g0127
a0002c0003t0001g0011
a0001c0001t0001g0122
a0001c0001t0001g0127
a0002c0003t0001g0011
 3 HG02895.hp1
NA18522.hp1
NA19075.hp1
HG02895.hp1
NA18522.hp1
NA19075.hp1
 intron_variant MODIFIER c.1082-132delA
c.1082-132delA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977780
chrY:2977780 CAAAA
CAAAA
 C
C
 3 a0001c0001t0001g0033
a0001c0001t0001g0053
a0001c0002t0001g0034
a0001c0001t0001g0033
a0001c0001t0001g0053
a0001c0002t0001g0034
 3 HG02735.hp1
NA20805.hp1
NA20905.hp1
HG02735.hp1
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.1082-135_1082-132d
others(6): Show 
c.1082-135_1082-132delAAAA
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 6/7 INFO_REALIGN_3_PRIME chrY 2977780
chrY:2978360 C
C
 T
T
 3 a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0054
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0054
 3 HG01099.hp1
HG03579.hp1
HG03710.hp1
HG01099.hp1
HG03579.hp1
HG03710.hp1
 intron_variant MODIFIER c.1222+280C>T
c.1222+280C>T
ZFY ENSG00000067646.12 transcript ENST00000155093.8 protein_coding 7/7 chrY 2978360

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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