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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   MAGIX_chrX_49157758_49173774  MAGIX_chrX_49157758_49173774 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 79917
ensemblid ENSG00000269313.6
hgncid 30006
symbol MAGIX
name MAGI family member, X-linked
refseq_nuc NM_024859.4
refseq_prot NP_079135.3
ensembl_nuc ENST00000595224.6
ensembl_prot ENSP00000471299.1
mane_status MANE Select
chr chrX
start 49162758
end 49168774
strand +
ver v1.2
region chrX:49162758-49168774
region5000 chrX:49157758-49173774
regionname0 MAGIX_chrX_49162758_49168774
regionname5000 MAGIX_chrX_49157758_49173774

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0000 0/0 0 1 1 0 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001 1/1 334 226 54 51 81 11 27 63 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0002 0/0 334 12 10 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0003 0/0 334 8 6 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0004 0/0 334 4 4 0 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0005 0/0 334 3 0 0 0 0 3 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0006 0/0 334 1 1 0 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0007 0/0 334 1 0 0 1 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0008 0/0 303 1 1 0 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0009 0/0 334 1 0 0 1 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0010 0/0 271 1 0 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0011 0/0 67 1 1 0 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 1005 204 53 49 68 10 22 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0002 0/0 1005 14 0 1 8 0 5 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0003 0/0 1005 12 10 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0004 0/0 1005 8 6 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0005 0/0 1005 7 1 1 5 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0006 0/0 1005 4 4 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0007 0/0 1005 3 0 0 0 0 3 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0008 0/0 1006 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0009 0/0 1006 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0010 0/0 1005 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0011 0/0 1005 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0012 0/0 1004 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0013 0/0 1005 1 0 0 0 1 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0014 0/0 1006 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
c0015 0/0 1005 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/1 2506 142 23 32 66 4 16 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0002 0/0 2507 23 1 5 6 1 10 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0003 1/0 2508 19 14 4 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0004 0/0 2505 18 8 4 3 3 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0005 0/0 2506 9 9 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0006 0/0 2506 8 0 4 0 2 2 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0007 0/0 2509 4 4 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0008 0/0 2506 4 4 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0009 0/0 2508 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0010 0/0 2507 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0011 0/0 2506 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0012 0/0 2504 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0013 0/0 2507 2 0 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0014 0/0 2505 2 0 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0015 0/0 2508 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0016 0/0 2507 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0017 0/0 2508 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0018 0/0 2504 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0019 0/0 2503 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0020 0/0 2507 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0021 0/0 2501 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0022 0/0 2505 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0023 0/0 2501 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0024 0/0 2509 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0025 0/0 2508 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0026 0/0 2506 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0027 0/0 2508 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0028 0/0 2506 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0029 0/0 2505 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0030 0/0 2507 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0031 0/0 2506 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0032 0/0 2507 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0033 0/0 2507 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0034 0/0 2506 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
t0035 0/0 2506 1 0 0 0 1 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/1 168 19 41 69 11 27 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0002 1/0 28 23 4 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0003 0/0 12 11 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0004 0/0 11 9 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0005 0/0 8 0 0 8 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0006 0/0 7 5 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0007 0/0 5 0 5 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0008 0/0 5 5 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0009 0/0 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0010 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0011 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0012 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0013 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0014 0/0 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0015 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0016 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0017 0/0 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0018 0/0 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0019 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0020 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0021 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0022 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
g0023 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0000c0009 0/0 1006 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001 1/1 1005 204 53 49 68 10 22 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0002 0/0 1005 14 0 1 8 0 5 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0005 0/0 1005 7 1 1 5 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0013 0/0 1005 1 0 0 0 1 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0002c0003 0/0 1005 12 10 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0003c0004 0/0 1005 8 6 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0004c0006 0/0 1005 4 4 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0005c0007 0/0 1005 3 0 0 0 0 3 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0006c0015 0/0 1005 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0007c0010 0/0 1005 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0008c0012 0/0 1004 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0009c0011 0/0 1005 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0010c0014 0/0 1006 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0011c0008 0/0 1006 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0000c0009t0008 0/0 3511 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0001 0/1 3510 125 17 29 58 4 16 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0002 0/0 3511 8 0 3 2 1 2 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0003 1/0 3512 19 14 4 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0004 0/0 3509 16 8 3 3 2 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0006 0/0 3510 8 0 4 0 2 2 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0007 0/0 3513 4 4 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0009 0/0 3512 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0010 0/0 3511 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0012 0/0 3508 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0013 0/0 3511 2 0 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0014 0/0 3509 2 0 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0015 0/0 3512 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0016 0/0 3511 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0017 0/0 3512 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0018 0/0 3508 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0019 0/0 3507 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0020 0/0 3511 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0021 0/0 3505 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0022 0/0 3509 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0025 0/0 3512 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0027 0/0 3512 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0028 0/0 3510 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0029 0/0 3509 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0034 0/0 3510 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0001t0035 0/0 3510 1 0 0 0 1 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0002t0002 0/0 3511 10 0 1 4 0 5 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0002t0023 0/0 3505 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0002t0024 0/0 3513 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0002t0026 0/0 3510 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0002t0032 0/0 3511 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0005t0001 0/0 3510 7 1 1 5 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0001c0013t0004 0/0 3509 1 0 0 0 1 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0002c0003t0001 0/0 3510 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0002c0003t0004 0/0 3509 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0002c0003t0005 0/0 3510 9 9 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0002c0003t0033 0/0 3511 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0003c0004t0001 0/0 3510 5 4 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0003c0004t0002 0/0 3511 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0003c0004t0011 0/0 3510 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0004c0006t0008 0/0 3510 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0004c0006t0030 0/0 3511 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0004c0006t0031 0/0 3510 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0005c0007t0002 0/0 3511 3 0 0 0 0 3 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0006c0015t0001 0/0 3510 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0007c0010t0001 0/0 3510 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0008c0012t0002 0/0 3510 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0009c0011t0001 0/0 3510 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0010c0014t0001 0/0 3511 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774
a0011c0008t0008 0/0 3511 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX copy fasta chrX 49157758 49173774

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0000c0009t0008g0023 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0001g0001 0/1 109 16 24 49 4 15 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0001g0003 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0001g0005 0/0 7 0 0 7 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0001g0007 0/0 5 0 5 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0001g0010 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0001g0011 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0001g0018 0/0 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0002g0001 0/0 8 0 3 2 1 2 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0003g0002 1/0 18 13 4 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0003g0020 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0004g0001 0/0 7 1 2 2 2 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0004g0003 0/0 8 7 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0004g0005 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0006g0001 0/0 8 0 4 0 2 2 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0007g0002 0/0 4 4 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0009g0002 0/0 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0010g0002 0/0 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0012g0003 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0012g0019 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0013g0001 0/0 2 0 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0014g0001 0/0 2 0 2 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0015g0022 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0016g0002 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0017g0002 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0018g0015 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0019g0013 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0020g0001 0/0 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0021g0016 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0022g0003 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0025g0014 0/0 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0027g0001 0/0 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0028g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0029g0003 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0034g0001 0/0 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0001t0035g0001 0/0 1 0 0 0 1 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0002t0002g0001 0/0 8 0 1 3 0 4 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0002t0002g0012 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0002t0002g0017 0/0 1 0 0 0 0 1 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0002t0023g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0002t0024g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0002t0026g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0002t0032g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0005t0001g0001 0/0 7 1 1 5 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0001c0013t0004g0001 0/0 1 0 0 0 1 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0002c0003t0001g0004 0/0 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0002c0003t0004g0004 0/0 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0002c0003t0005g0004 0/0 8 8 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0002c0003t0005g0021 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0002c0003t0033g0004 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0003c0004t0001g0006 0/0 5 4 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0003c0004t0002g0006 0/0 1 0 1 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0003c0004t0011g0009 0/0 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0004c0006t0008g0008 0/0 2 2 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0004c0006t0030g0008 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0004c0006t0031g0008 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0005c0007t0002g0001 0/0 3 0 0 0 0 3 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0006c0015t0001g0006 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0007c0010t0001g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0008c0012t0002g0001 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0009c0011t0001g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0010c0014t0001g0001 0/0 1 0 0 1 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
a0011c0008t0008g0008 0/0 1 1 0 0 0 0 MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00140 hp1 a0001 c0001 t0001 g0001 EUR GBR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00280 hp1 a0001 c0013 t0004 g0001 EUR FIN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00323 hp1 a0001 c0001 t0004 g0001 EUR FIN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00323 hp2 a0001 c0001 t0002 g0001 EUR FIN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00408 hp1 a0001 c0002 t0032 g0001 EAS CHS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00408 hp2 a0001 c0001 t0001 g0001 EAS CHS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00609 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00621 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00639 hp1 a0001 c0001 t0006 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00639 hp2 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00642 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00673 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00733 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00733 hp2 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00735 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00735 hp2 a0001 c0001 t0003 g0002 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00738 hp1 a0003 c0004 t0002 g0006 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00741 hp1 a0002 c0003 t0001 g0004 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG00741 hp2 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01069 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01070 hp1 a0001 c0001 t0014 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01070 hp2 a0002 c0003 t0004 g0004 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01071 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01071 hp2 a0001 c0001 t0014 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01074 hp1 a0001 c0001 t0006 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01081 hp1 a0001 c0001 t0004 g0003 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01081 hp2 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01099 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01106 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01109 hp1 a0001 c0001 t0002 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01167 hp1 a0001 c0001 t0003 g0002 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01169 hp1 a0001 c0001 t0027 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01169 hp2 a0001 c0001 t0003 g0002 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01192 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01243 hp1 a0001 c0001 t0003 g0002 AMR PUR MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01255 hp1 a0001 c0001 t0001 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01256 hp1 a0001 c0001 t0004 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01258 hp1 a0001 c0001 t0001 g0007 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01261 hp1 a0001 c0001 t0001 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01346 hp1 a0001 c0001 t0001 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01346 hp2 a0001 c0001 t0001 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01358 hp1 a0001 c0001 t0002 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01361 hp1 a0001 c0001 t0001 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01361 hp2 a0001 c0001 t0001 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01433 hp1 a0001 c0001 t0004 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01515 hp1 a0001 c0001 t0001 g0001 EUR IBS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01516 hp1 a0001 c0001 t0006 g0001 EUR IBS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01516 hp2 a0001 c0001 t0001 g0001 EUR IBS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01517 hp1 a0001 c0001 t0006 g0001 EUR IBS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01517 hp2 a0001 c0001 t0001 g0001 EUR IBS MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01884 hp1 a0002 c0003 t0005 g0004 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01884 hp2 a0001 c0001 t0009 g0002 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01891 hp1 a0001 c0001 t0003 g0002 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01891 hp2 a0006 c0015 t0001 g0006 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01928 hp1 a0001 c0001 t0013 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01934 hp1 a0003 c0004 t0001 g0006 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01943 hp1 a0001 c0001 t0002 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01952 hp1 a0001 c0001 t0001 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01975 hp1 a0001 c0001 t0001 g0007 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01975 hp2 a0001 c0001 t0006 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01978 hp1 a0001 c0001 t0020 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01978 hp2 a0001 c0001 t0013 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01993 hp1 a0001 c0005 t0001 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01993 hp2 a0001 c0002 t0002 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02015 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02027 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02040 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02055 hp1 a0001 c0001 t0004 g0003 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02056 hp1 a0001 c0001 t0001 g0005 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02071 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02074 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02083 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02129 hp1 a0001 c0001 t0028 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02132 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02135 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02145 hp1 a0001 c0001 t0007 g0002 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02148 hp1 a0001 c0001 t0001 g0007 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02148 hp2 a0001 c0001 t0001 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02155 hp1 a0001 c0001 t0001 g0001 EAS CDX MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02155 hp2 a0010 c0014 t0001 g0001 EAS CDX MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02257 hp1 a0001 c0001 t0001 g0001 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02257 hp2 a0001 c0001 t0004 g0003 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02258 hp1 a0001 c0001 t0001 g0001 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02273 hp1 a0001 c0001 t0001 g0007 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02273 hp2 a0001 c0001 t0001 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02280 hp1 a0003 c0004 t0011 g0009 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02280 hp2 a0002 c0003 t0005 g0004 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02293 hp1 a0001 c0001 t0001 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02293 hp2 a0001 c0001 t0001 g0001 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02300 hp1 a0001 c0001 t0001 g0007 AMR PEL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02451 hp1 a0003 c0004 t0001 g0006 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02451 hp2 a0001 c0001 t0001 g0001 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02572 hp1 a0001 c0001 t0007 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02602 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02615 hp1 a0001 c0001 t0003 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02615 hp2 a0001 c0001 t0003 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02622 hp1 a0004 c0006 t0008 g0008 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02622 hp2 a0001 c0001 t0004 g0003 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02630 hp1 a0001 c0001 t0003 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02630 hp2 a0001 c0001 t0003 g0020 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02647 hp1 a0002 c0003 t0005 g0004 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02683 hp1 a0001 c0002 t0002 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02683 hp2 a0001 c0001 t0006 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02698 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02717 hp1 a0001 c0001 t0017 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02723 hp1 a0003 c0004 t0011 g0009 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02723 hp2 a0001 c0001 t0001 g0001 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02735 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02738 hp1 a0001 c0001 t0025 g0014 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02809 hp1 a0001 c0001 t0001 g0001 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02809 hp2 a0001 c0001 t0010 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02818 hp1 a0001 c0001 t0003 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02818 hp2 a0001 c0001 t0001 g0001 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02886 hp1 a0001 c0001 t0003 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02886 hp2 a0002 c0003 t0005 g0004 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02895 hp1 a0002 c0003 t0005 g0004 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02896 hp1 a0001 c0001 t0012 g0003 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02896 hp2 a0001 c0001 t0016 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02897 hp1 a0001 c0001 t0003 g0002 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02897 hp2 a0002 c0003 t0005 g0004 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02965 hp1 a0001 c0001 t0004 g0003 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02970 hp1 a0001 c0001 t0001 g0001 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02970 hp2 a0001 c0001 t0009 g0002 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02976 hp1 a0001 c0001 t0004 g0003 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02976 hp2 a0001 c0001 t0003 g0002 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03017 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03041 hp1 a0001 c0001 t0001 g0001 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03041 hp2 a0004 c0006 t0031 g0008 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03098 hp1 a0008 c0012 t0002 g0001 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03130 hp1 a0002 c0003 t0033 g0004 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03139 hp1 a0001 c0001 t0029 g0003 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03195 hp1 a0002 c0003 t0005 g0004 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03195 hp2 a0001 c0001 t0003 g0002 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03209 hp1 a0003 c0004 t0001 g0006 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03225 hp1 a0001 c0001 t0001 g0001 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03453 hp1 a0004 c0006 t0008 g0008 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03453 hp2 a0001 c0001 t0001 g0001 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03486 hp1 a0001 c0001 t0007 g0002 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03486 hp2 a0004 c0006 t0030 g0008 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03490 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03491 hp1 a0005 c0007 t0002 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03491 hp2 a0001 c0001 t0001 g0018 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03492 hp1 a0005 c0007 t0002 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03516 hp1 a0001 c0001 t0001 g0003 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03516 hp2 a0001 c0001 t0001 g0001 AFR ESN MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03540 hp1 a0003 c0004 t0001 g0006 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03540 hp2 a0001 c0001 t0012 g0019 AFR GWD MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03579 hp1 a0001 c0001 t0001 g0001 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03654 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03669 hp1 a0001 c0002 t0002 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03669 hp2 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03688 hp1 a0001 c0001 t0001 g0001 SAS STU MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03704 hp1 a0001 c0001 t0006 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03704 hp2 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03710 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03834 hp1 a0001 c0002 t0002 g0001 SAS BEB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03834 hp2 a0001 c0002 t0002 g0001 SAS BEB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03927 hp1 a0001 c0002 t0002 g0017 SAS BEB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03927 hp2 a0001 c0001 t0002 g0001 SAS BEB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03942 hp1 a0001 c0001 t0001 g0001 SAS BEB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG04115 hp1 a0001 c0001 t0034 g0001 SAS STU MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG04184 hp1 a0001 c0001 t0001 g0001 SAS BEB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG04184 hp2 a0001 c0001 t0002 g0001 SAS BEB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG04199 hp1 a0001 c0001 t0001 g0001 SAS STU MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG04204 hp1 a0001 c0001 t0001 g0001 SAS STU MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG04228 hp1 a0005 c0007 t0002 g0001 SAS STU MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18522 hp1 a0001 c0001 t0003 g0002 AFR YRI MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18612 hp1 a0001 c0001 t0001 g0001 EAS CHB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18747 hp1 a0001 c0001 t0001 g0001 EAS CHB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18906 hp1 a0001 c0001 t0003 g0002 AFR YRI MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18906 hp2 a0002 c0003 t0005 g0021 AFR YRI MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18940 hp1 a0001 c0001 t0001 g0005 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18943 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18944 hp1 a0009 c0011 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18945 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18948 hp1 a0001 c0001 t0019 g0013 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18950 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18950 hp2 a0001 c0001 t0001 g0005 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18952 hp1 a0001 c0001 t0002 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18953 hp1 a0001 c0001 t0002 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18956 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18956 hp2 a0001 c0002 t0026 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18959 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18960 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18961 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18962 hp1 a0001 c0001 t0004 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18965 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18966 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18967 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18970 hp1 a0001 c0001 t0001 g0005 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18971 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18977 hp1 a0001 c0002 t0002 g0012 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18982 hp1 a0001 c0005 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18983 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18984 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18985 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18986 hp1 a0001 c0005 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18988 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18989 hp1 a0001 c0001 t0021 g0016 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18990 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18994 hp1 a0001 c0002 t0002 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18995 hp1 a0001 c0002 t0002 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18997 hp1 a0001 c0005 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA18997 hp2 a0001 c0001 t0001 g0005 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19000 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19004 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19005 hp1 a0001 c0001 t0001 g0005 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19006 hp1 a0001 c0001 t0001 g0010 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19007 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19009 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19010 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19010 hp2 a0001 c0002 t0002 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19012 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19030 hp1 a0001 c0001 t0001 g0001 AFR LWK MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19030 hp2 a0011 c0008 t0008 g0008 AFR LWK MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19043 hp1 a0001 c0001 t0004 g0003 AFR LWK MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19055 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19056 hp1 a0001 c0001 t0004 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19057 hp1 a0007 c0010 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19057 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19058 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19062 hp1 a0001 c0005 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19063 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19065 hp1 a0001 c0001 t0001 g0005 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19065 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19066 hp1 a0001 c0005 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19067 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19068 hp1 a0001 c0002 t0024 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19070 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19072 hp1 a0001 c0002 t0023 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19076 hp1 a0001 c0001 t0018 g0015 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19079 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19082 hp1 a0001 c0001 t0015 g0022 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19083 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19085 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19086 hp1 a0001 c0001 t0001 g0011 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19088 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19089 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA19091 hp1 a0001 c0001 t0004 g0005 EAS JPT MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA20129 hp1 a0001 c0001 t0004 g0001 AFR ASW MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA20129 hp2 a0001 c0001 t0010 g0002 AFR ASW MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA20752 hp1 a0001 c0001 t0035 g0001 EUR TSI MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA20805 hp1 a0001 c0001 t0004 g0001 EUR TSI MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA20905 hp1 a0001 c0001 t0001 g0001 SAS GIH MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01123 hp1 a0001 c0001 t0006 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG01123 hp2 a0001 c0001 t0001 g0001 AMR CLM MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02109 hp1 a0001 c0001 t0001 g0001 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02109 hp2 a0001 c0001 t0022 g0003 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02486 hp1 a0001 c0001 t0003 g0002 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02559 hp1 a0003 c0004 t0001 g0006 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG02559 hp2 a0001 c0001 t0003 g0002 AFR ACB MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG03471 hp1 a0000 c0009 t0008 g0023 AFR MSL MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG06807 hp1 a0001 c0001 t0004 g0003 AFR USA MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
HG06807 hp2 a0002 c0003 t0005 g0004 AFR USA MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA20300 hp1 a0001 c0001 t0001 g0001 AFR USA MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA20300 hp2 a0001 c0005 t0001 g0001 AFR USA MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA21309 hp1 a0001 c0001 t0001 g0001 AFR LWK MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
NA21309 hp2 a0001 c0001 t0007 g0002 AFR LWK MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0001 REF REF MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774
homoSapiens_grch38 hp1 a0001 c0001 t0003 g0002 REF REF MAGIX_chrX_49157758_49173774 MAGIX chrX 49157758 49173774

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:49162899 C
C
 T
T
 3 a0002
a0003
a0006
a0002
a0003
a0006
 21 HG00738.hp1
HG00741.hp1
HG01070.hp2
others(18): Show 
HG00738.hp1
HG00741.hp1
HG01070.hp2
HG01884.hp1
HG01891.hp2
HG01934.hp1
HG02280.hp1
HG02280.hp2
HG02451.hp1
HG02559.hp1
HG02647.hp1
HG02723.hp1
HG02886.hp2
HG02895.hp1
HG02897.hp2
HG03130.hp1
HG03195.hp1
HG03209.hp1
HG03540.hp1
HG06807.hp2
NA18906.hp2
 missense_variant MODERATE c.10C>T
c.10C>T
 p.Arg4Cys
p.Arg4Cys
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/6 142/3512 10/1005 4/334 chrX 49162899
chrX:49162917 G
G
 A
A
 3 a0000
a0004
a0011
a0000
a0004
a0011
 6 HG02622.hp1
HG03041.hp2
HG03453.hp1
others(3): Show 
HG02622.hp1
HG03041.hp2
HG03453.hp1
HG03471.hp1
HG03486.hp2
NA19030.hp2
 missense_variant MODERATE c.28G>A
c.28G>A
 p.Asp10Asn
p.Asp10Asn
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/6 160/3512 28/1005 10/334 chrX 49162917
chrX:49163846 G
G
 GC
GC
 1 a0011
a0011
 1 NA19030.hp2
NA19030.hp2
 frameshift_variant HIGH c.118dupC
c.118dupC
 p.Leu40fs
p.Leu40fs
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/6 251/3512 119/1005 40/334 INFO_REALIGN_3_PRIME chrX 49163846
chrX:49163891 G
G
 A
A
 1 a0000
a0000
 1 HG03471.hp1
HG03471.hp1
 missense_variant MODERATE c.158G>A
c.158G>A
 p.Arg53His
p.Arg53His
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/6 290/3512 158/1005 53/334 chrX 49163891
chrX:49163902 G
G
 A
A
 3 a0000
a0004
a0011
a0000
a0004
a0011
 6 HG02622.hp1
HG03041.hp2
HG03453.hp1
others(3): Show 
HG02622.hp1
HG03041.hp2
HG03453.hp1
HG03471.hp1
HG03486.hp2
NA19030.hp2
 missense_variant MODERATE c.169G>A
c.169G>A
 p.Ala57Thr
p.Ala57Thr
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/6 301/3512 169/1005 57/334 chrX 49163902
chrX:49164712 A
A
 G
G
 1 a0002
a0002
 12 HG00741.hp1
HG01070.hp2
HG01884.hp1
others(9): Show 
HG00741.hp1
HG01070.hp2
HG01884.hp1
HG02280.hp2
HG02647.hp1
HG02886.hp2
HG02895.hp1
HG02897.hp2
HG03130.hp1
HG03195.hp1
HG06807.hp2
NA18906.hp2
 missense_variant MODERATE c.202A>G
c.202A>G
 p.Ser68Gly
p.Ser68Gly
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 3/6 334/3512 202/1005 68/334 chrX 49164712
chrX:49165032 C
C
 T
T
 1 a0006
a0006
 1 HG01891.hp2
HG01891.hp2
 missense_variant MODERATE c.449C>T
c.449C>T
 p.Pro150Leu
p.Pro150Leu
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 4/6 581/3512 449/1005 150/334 chrX 49165032
chrX:49165074 G
G
 A
A
 1 a0007
a0007
 1 NA19057.hp1
NA19057.hp1
 missense_variant MODERATE c.491G>A
c.491G>A
 p.Arg164His
p.Arg164His
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 4/6 623/3512 491/1005 164/334 chrX 49165074
chrX:49166122 C
C
 CG
CG
 1 a0010
a0010
 1 HG02155.hp2
HG02155.hp2
 frameshift_variant HIGH c.732dupG
c.732dupG
 p.Ser245fs
p.Ser245fs
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 865/3512 733/1005 245/334 INFO_REALIGN_3_PRIME chrX 49166122
chrX:49166187 AC
AC
 A
A
 1 a0008
a0008
 1 HG03098.hp1
HG03098.hp1
 frameshift_variant HIGH c.796delC
c.796delC
 p.Arg266fs
p.Arg266fs
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 928/3512 796/1005 266/334 INFO_REALIGN_3_PRIME chrX 49166187
chrX:49166203 A
A
 C
C
 1 a0009
a0009
 1 NA18944.hp1
NA18944.hp1
 missense_variant MODERATE c.809A>C
c.809A>C
 p.Glu270Ala
p.Glu270Ala
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 941/3512 809/1005 270/334 chrX 49166203
chrX:49166284 C
C
 T
T
 1 a0005
a0005
 3 HG03491.hp1
HG03492.hp1
HG04228.hp1
HG03491.hp1
HG03492.hp1
HG04228.hp1
 missense_variant MODERATE c.890C>T
c.890C>T
 p.Pro297Leu
p.Pro297Leu
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1022/3512 890/1005 297/334 chrX 49166284
chrX:49166337 C
C
 CT
CT
 1 a0000
a0000
 1 HG03471.hp1
HG03471.hp1
 frameshift_variant HIGH c.944dupT
c.944dupT
 p.Gly316fs
p.Gly316fs
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1077/3512 945/1005 315/334 INFO_REALIGN_3_PRIME chrX 49166337

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:49162910 C
C
 T
T
 1 a0001c0005
a0001c0005
 7 HG01993.hp1
NA18982.hp1
NA18986.hp1
others(4): Show 
HG01993.hp1
NA18982.hp1
NA18986.hp1
NA18997.hp1
NA19062.hp1
NA19066.hp1
NA20300.hp2
 synonymous_variant LOW c.21C>T
c.21C>T
 p.Asp7Asp
p.Asp7Asp
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/6 153/3512 21/1005 7/334 chrX 49162910
chrX:49164714 C
C
 T
T
 3 a0001c0002
a0005c0007
a0010c0014
a0001c0002
a0005c0007
a0010c0014
 18 HG00408.hp1
HG01993.hp2
HG02155.hp2
others(15): Show 
HG00408.hp1
HG01993.hp2
HG02155.hp2
HG02683.hp1
HG03491.hp1
HG03492.hp1
HG03669.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG04228.hp1
NA18956.hp2
NA18977.hp1
NA18994.hp1
NA18995.hp1
NA19010.hp2
NA19068.hp1
NA19072.hp1
 synonymous_variant LOW c.204C>T
c.204C>T
 p.Ser68Ser
p.Ser68Ser
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 3/6 336/3512 204/1005 68/334 chrX 49164714
chrX:49165252 C
C
 G
G
 1 a0001c0013
a0001c0013
 1 HG00280.hp1
HG00280.hp1
 synonymous_variant LOW c.570C>G
c.570C>G
 p.Ala190Ala
p.Ala190Ala
 MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 5/6 702/3512 570/1005 190/334 chrX 49165252

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:49162822 G
G
 GA
GA
 1 a0001c0001t0015
a0001c0001t0015
 1 NA19082.hp1
NA19082.hp1
 5_prime_UTR_variant MODIFIER c.-68_-67insA
c.-68_-67insA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/6 67 chrX 49162822
chrX:49162859 A
A
 T
T
 44 a0000c0009t0008
a0001c0001t0001
a0001c0001t0002
others(41): Show 
a0000c0009t0008
a0001c0001t0001
a0001c0001t0002
a0001c0001t0004
a0001c0001t0006
a0001c0001t0012
a0001c0001t0013
a0001c0001t0014
a0001c0001t0015
a0001c0001t0018
a0001c0001t0019
a0001c0001t0020
a0001c0001t0021
a0001c0001t0022
a0001c0001t0025
a0001c0001t0027
a0001c0001t0028
a0001c0001t0029
a0001c0001t0034
a0001c0001t0035
a0001c0002t0002
a0001c0002t0023
a0001c0002t0024
a0001c0002t0026
a0001c0002t0032
a0001c0005t0001
a0001c0013t0004
a0002c0003t0001
a0002c0003t0004
a0002c0003t0005
a0002c0003t0033
a0003c0004t0001
a0003c0004t0002
a0003c0004t0011
a0004c0006t0008
a0004c0006t0030
a0004c0006t0031
a0005c0007t0002
a0006c0015t0001
a0007c0010t0001
a0008c0012t0002
a0009c0011t0001
a0010c0014t0001
a0011c0008t0008
 231 HG00140.hp1
HG00280.hp1
HG00323.hp1
others(228): Show 
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01169.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01361.hp1
HG01361.hp2
HG01433.hp1
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02559.hp1
HG02602.hp1
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp1
HG02897.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18747.hp1
NA18906.hp2
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18950.hp1
NA18950.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18956.hp2
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18997.hp1
NA18997.hp2
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19062.hp1
NA19063.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20129.hp1
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 5_prime_UTR_premature_start_codon_gain_variant LOW c.-31A>T
c.-31A>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/6 chrX 49162859
chrX:49162873 C
C
 G
G
 1 a0001c0001t0035
a0001c0001t0035
 1 NA20752.hp1
NA20752.hp1
 5_prime_UTR_variant MODIFIER c.-17C>G
c.-17C>G
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/6 17 chrX 49162873
chrX:49162879 G
G
 T
T
 1 a0001c0001t0017
a0001c0001t0017
 1 HG02717.hp1
HG02717.hp1
 5_prime_UTR_variant MODIFIER c.-11G>T
c.-11G>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/6 11 chrX 49162879
chrX:49166847 C
C
 T
T
 1 a0001c0001t0034
a0001c0001t0034
 1 HG04115.hp1
HG04115.hp1
 3_prime_UTR_variant MODIFIER c.*448C>T
c.*448C>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 448 chrX 49166847
chrX:49166986 CG
CG
 C
C
 1 a0001c0001t0018
a0001c0001t0018
 1 NA19076.hp1
NA19076.hp1
 3_prime_UTR_variant MODIFIER c.*590delG
c.*590delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 590 INFO_REALIGN_3_PRIME chrX 49166986
chrX:49167029 C
C
 T
T
 2 a0002c0003t0005
a0002c0003t0033
a0002c0003t0005
a0002c0003t0033
 10 HG01884.hp1
HG02280.hp2
HG02647.hp1
others(7): Show 
HG01884.hp1
HG02280.hp2
HG02647.hp1
HG02886.hp2
HG02895.hp1
HG02897.hp2
HG03130.hp1
HG03195.hp1
HG06807.hp2
NA18906.hp2
 3_prime_UTR_variant MODIFIER c.*630C>T
c.*630C>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 630 chrX 49167029
chrX:49167056 CG
CG
 C
C
 1 a0001c0001t0019
a0001c0001t0019
 1 NA18948.hp1
NA18948.hp1
 3_prime_UTR_variant MODIFIER c.*659delG
c.*659delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 659 INFO_REALIGN_3_PRIME chrX 49167056
chrX:49167117 T
T
 C
C
 45 a0000c0009t0008
a0001c0001t0001
a0001c0001t0002
others(42): Show 
a0000c0009t0008
a0001c0001t0001
a0001c0001t0002
a0001c0001t0004
a0001c0001t0006
a0001c0001t0009
a0001c0001t0012
a0001c0001t0013
a0001c0001t0014
a0001c0001t0015
a0001c0001t0018
a0001c0001t0019
a0001c0001t0020
a0001c0001t0021
a0001c0001t0022
a0001c0001t0025
a0001c0001t0027
a0001c0001t0028
a0001c0001t0029
a0001c0001t0034
a0001c0001t0035
a0001c0002t0002
a0001c0002t0023
a0001c0002t0024
a0001c0002t0026
a0001c0002t0032
a0001c0005t0001
a0001c0013t0004
a0002c0003t0001
a0002c0003t0004
a0002c0003t0005
a0002c0003t0033
a0003c0004t0001
a0003c0004t0002
a0003c0004t0011
a0004c0006t0008
a0004c0006t0030
a0004c0006t0031
a0005c0007t0002
a0006c0015t0001
a0007c0010t0001
a0008c0012t0002
a0009c0011t0001
a0010c0014t0001
a0011c0008t0008
 233 HG00140.hp1
HG00280.hp1
HG00323.hp1
others(230): Show 
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01169.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01361.hp1
HG01361.hp2
HG01433.hp1
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02559.hp1
HG02602.hp1
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp1
HG02897.hp2
HG02965.hp1
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18747.hp1
NA18906.hp2
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18950.hp1
NA18950.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18956.hp2
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18997.hp1
NA18997.hp2
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19062.hp1
NA19063.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20129.hp1
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*718T>C
c.*718T>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 718 chrX 49167117
chrX:49167124 G
G
 GC
GC
 1 a0001c0001t0020
a0001c0001t0020
 1 HG01978.hp1
HG01978.hp1
 3_prime_UTR_variant MODIFIER c.*730dupC
c.*730dupC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 731 INFO_REALIGN_3_PRIME chrX 49167124
chrX:49167295 GC
GC
 G
G
 1 a0001c0001t0021
a0001c0001t0021
 1 NA18989.hp1
NA18989.hp1
 3_prime_UTR_variant MODIFIER c.*899delC
c.*899delC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 899 INFO_REALIGN_3_PRIME chrX 49167295
chrX:49167406 TC
TC
 T
T
 1 a0001c0001t0018
a0001c0001t0018
 1 NA19076.hp1
NA19076.hp1
 3_prime_UTR_variant MODIFIER c.*1009delC
c.*1009delC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1009 INFO_REALIGN_3_PRIME chrX 49167406
chrX:49167454 C
C
 A
A
 1 a0001c0001t0022
a0001c0001t0022
 1 HG02109.hp2
HG02109.hp2
 3_prime_UTR_variant MODIFIER c.*1055C>A
c.*1055C>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1055 chrX 49167454
chrX:49167543 C
C
 CG
CG
 1 a0001c0001t0015
a0001c0001t0015
 1 NA19082.hp1
NA19082.hp1
 3_prime_UTR_variant MODIFIER c.*1146dupG
c.*1146dupG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1147 INFO_REALIGN_3_PRIME chrX 49167543
chrX:49167667 TG
TG
 T
T
 2 a0001c0001t0016
a0001c0001t0021
a0001c0001t0016
a0001c0001t0021
 2 HG02896.hp2
NA18989.hp1
HG02896.hp2
NA18989.hp1
 3_prime_UTR_variant MODIFIER c.*1272delG
c.*1272delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1272 INFO_REALIGN_3_PRIME chrX 49167667
chrX:49167913 G
G
 T
T
 3 a0001c0001t0006
a0001c0001t0013
a0001c0001t0014
a0001c0001t0006
a0001c0001t0013
a0001c0001t0014
 12 HG00639.hp1
HG01070.hp1
HG01071.hp2
others(9): Show 
HG00639.hp1
HG01070.hp1
HG01071.hp2
HG01074.hp1
HG01123.hp1
HG01516.hp1
HG01517.hp1
HG01928.hp1
HG01975.hp2
HG01978.hp2
HG02683.hp2
HG03704.hp1
 3_prime_UTR_variant MODIFIER c.*1514G>T
c.*1514G>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1514 chrX 49167913
chrX:49167952 A
A
 G
G
 1 a0001c0002t0032
a0001c0002t0032
 1 HG00408.hp1
HG00408.hp1
 3_prime_UTR_variant MODIFIER c.*1553A>G
c.*1553A>G
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1553 chrX 49167952
chrX:49167953 C
C
 G
G
 5 a0000c0009t0008
a0004c0006t0008
a0004c0006t0030
others(2): Show 
a0000c0009t0008
a0004c0006t0008
a0004c0006t0030
a0004c0006t0031
a0011c0008t0008
 6 HG02622.hp1
HG03041.hp2
HG03453.hp1
others(3): Show 
HG02622.hp1
HG03041.hp2
HG03453.hp1
HG03471.hp1
HG03486.hp2
NA19030.hp2
 3_prime_UTR_variant MODIFIER c.*1554C>G
c.*1554C>G
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1554 chrX 49167953
chrX:49167993 TC
TC
 T
T
 1 a0001c0001t0019
a0001c0001t0019
 1 NA18948.hp1
NA18948.hp1
 3_prime_UTR_variant MODIFIER c.*1597delC
c.*1597delC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1597 INFO_REALIGN_3_PRIME chrX 49167993
chrX:49168012 A
A
 T
T
 2 a0001c0001t0022
a0001c0001t0029
a0001c0001t0022
a0001c0001t0029
 2 HG02109.hp2
HG03139.hp1
HG02109.hp2
HG03139.hp1
 3_prime_UTR_variant MODIFIER c.*1613A>T
c.*1613A>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1613 chrX 49168012
chrX:49168217 TC
TC
 T
T
 1 a0001c0001t0021
a0001c0001t0021
 1 NA18989.hp1
NA18989.hp1
 3_prime_UTR_variant MODIFIER c.*1821delC
c.*1821delC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1821 INFO_REALIGN_3_PRIME chrX 49168217
chrX:49168306 T
T
 C
C
 1 a0003c0004t0011
a0003c0004t0011
 2 HG02280.hp1
HG02723.hp1
HG02280.hp1
HG02723.hp1
 3_prime_UTR_variant MODIFIER c.*1907T>C
c.*1907T>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1907 chrX 49168306
chrX:49168361 CG
CG
 C
C
 1 a0001c0001t0021
a0001c0001t0021
 1 NA18989.hp1
NA18989.hp1
 3_prime_UTR_variant MODIFIER c.*1965delG
c.*1965delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1965 INFO_REALIGN_3_PRIME chrX 49168361
chrX:49168371 AG
AG
 A
A
 1 a0001c0002t0023
a0001c0002t0023
 1 NA19072.hp1
NA19072.hp1
 3_prime_UTR_variant MODIFIER c.*1974delG
c.*1974delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 1974 INFO_REALIGN_3_PRIME chrX 49168371
chrX:49168467 C
C
 CA
CA
 2 a0001c0001t0007
a0001c0002t0024
a0001c0001t0007
a0001c0002t0024
 5 HG02145.hp1
HG02572.hp1
HG03486.hp1
others(2): Show 
HG02145.hp1
HG02572.hp1
HG03486.hp1
NA19068.hp1
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*2094dupA
c.*2094dupA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2095 INFO_REALIGN_3_PRIME chrX 49168467
chrX:49168467 CA
CA
 C
C
 12 a0001c0001t0002
a0001c0001t0010
a0001c0001t0013
others(9): Show 
a0001c0001t0002
a0001c0001t0010
a0001c0001t0013
a0001c0001t0027
a0001c0002t0002
a0001c0002t0026
a0001c0002t0032
a0002c0003t0033
a0003c0004t0002
a0004c0006t0030
a0005c0007t0002
a0008c0012t0002
 32 HG00323.hp2
HG00408.hp1
HG00738.hp1
others(29): Show 
HG00323.hp2
HG00408.hp1
HG00738.hp1
HG01109.hp1
HG01169.hp1
HG01358.hp1
HG01928.hp1
HG01943.hp1
HG01978.hp2
HG01993.hp2
HG02683.hp1
HG02809.hp2
HG03098.hp1
HG03130.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03669.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG04184.hp2
HG04228.hp1
NA18952.hp1
NA18953.hp1
NA18956.hp2
NA18977.hp1
NA18994.hp1
NA18995.hp1
NA19010.hp2
NA20129.hp2
 3_prime_UTR_variant MODIFIER c.*2094delA
c.*2094delA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2094 INFO_REALIGN_3_PRIME chrX 49168467
chrX:49168467 CAA
CAA
 C
C
 21 a0000c0009t0008
a0001c0001t0001
a0001c0001t0006
others(18): Show 
a0000c0009t0008
a0001c0001t0001
a0001c0001t0006
a0001c0001t0015
a0001c0001t0018
a0001c0001t0020
a0001c0001t0028
a0001c0001t0034
a0001c0001t0035
a0001c0005t0001
a0002c0003t0001
a0002c0003t0005
a0003c0004t0001
a0003c0004t0011
a0004c0006t0008
a0004c0006t0031
a0006c0015t0001
a0007c0010t0001
a0009c0011t0001
a0010c0014t0001
a0011c0008t0008
 172 HG00140.hp1
HG00408.hp2
HG00609.hp1
others(169): Show 
HG00140.hp1
HG00408.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01074.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01123.hp1
HG01123.hp2
HG01192.hp1
HG01255.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01891.hp2
HG01934.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01993.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02109.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02559.hp1
HG02602.hp1
HG02622.hp1
HG02647.hp1
HG02683.hp2
HG02698.hp1
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02897.hp2
HG02970.hp1
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03490.hp1
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp1
HG03654.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04199.hp1
HG04204.hp1
HG06807.hp2
NA18612.hp1
NA18747.hp1
NA18906.hp2
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18950.hp1
NA18950.hp2
NA18956.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18990.hp1
NA18997.hp1
NA18997.hp2
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19055.hp1
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19062.hp1
NA19063.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19070.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20905.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*2093_*2094delAA
c.*2093_*2094delAA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2093 INFO_REALIGN_3_PRIME chrX 49168467
chrX:49168467 CAAA
CAAA
 C
C
 8 a0001c0001t0004
a0001c0001t0014
a0001c0001t0019
others(5): Show 
a0001c0001t0004
a0001c0001t0014
a0001c0001t0019
a0001c0001t0021
a0001c0001t0022
a0001c0001t0029
a0001c0013t0004
a0002c0003t0004
 24 HG00280.hp1
HG00323.hp1
HG01070.hp1
others(21): Show 
HG00280.hp1
HG00323.hp1
HG01070.hp1
HG01070.hp2
HG01071.hp2
HG01081.hp1
HG01256.hp1
HG01433.hp1
HG02055.hp1
HG02109.hp2
HG02257.hp2
HG02622.hp2
HG02965.hp1
HG02976.hp1
HG03139.hp1
HG06807.hp1
NA18948.hp1
NA18962.hp1
NA18989.hp1
NA19043.hp1
NA19056.hp1
NA19091.hp1
NA20129.hp1
NA20805.hp1
 3_prime_UTR_variant MODIFIER c.*2092_*2094delAAA
c.*2092_*2094delAAA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2092 INFO_REALIGN_3_PRIME chrX 49168467
chrX:49168467 CAAAA
CAAAA
 C
C
 2 a0001c0001t0012
a0001c0002t0023
a0001c0001t0012
a0001c0002t0023
 3 HG02896.hp1
HG03540.hp2
NA19072.hp1
HG02896.hp1
HG03540.hp2
NA19072.hp1
 3_prime_UTR_variant MODIFIER c.*2091_*2094delAAAA
c.*2091_*2094delAAAA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2091 INFO_REALIGN_3_PRIME chrX 49168467
chrX:49168487 A
A
 C
C
 1 a0001c0001t0022
a0001c0001t0022
 1 HG02109.hp2
HG02109.hp2
 3_prime_UTR_variant MODIFIER c.*2088A>C
c.*2088A>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2088 chrX 49168487
chrX:49168527 TC
TC
 T
T
 2 a0001c0002t0023
a0001c0002t0026
a0001c0002t0023
a0001c0002t0026
 2 NA18956.hp2
NA19072.hp1
NA18956.hp2
NA19072.hp1
 3_prime_UTR_variant MODIFIER c.*2131delC
c.*2131delC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2131 INFO_REALIGN_3_PRIME chrX 49168527
chrX:49168575 G
G
 A
A
 1 a0001c0001t0028
a0001c0001t0028
 1 HG02129.hp1
HG02129.hp1
 3_prime_UTR_variant MODIFIER c.*2176G>A
c.*2176G>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2176 chrX 49168575
chrX:49168622 TA
TA
 T
T
 1 a0001c0002t0023
a0001c0002t0023
 1 NA19072.hp1
NA19072.hp1
 3_prime_UTR_variant MODIFIER c.*2228delA
c.*2228delA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2228 INFO_REALIGN_3_PRIME chrX 49168622
chrX:49168641 G
G
 T
T
 1 a0004c0006t0031
a0004c0006t0031
 1 HG03041.hp2
HG03041.hp2
 3_prime_UTR_variant MODIFIER c.*2242G>T
c.*2242G>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2242 chrX 49168641
chrX:49168661 C
C
 CA
CA
 1 a0001c0001t0027
a0001c0001t0027
 1 HG01169.hp1
HG01169.hp1
 3_prime_UTR_variant MODIFIER c.*2264dupA
c.*2264dupA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 6/6 2265 INFO_REALIGN_3_PRIME chrX 49168661

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:49162985 A
A
 AC
AC
 1 a0001c0001t0001g0010
a0001c0001t0001g0010
 1 NA19006.hp1
NA19006.hp1
 intron_variant MODIFIER c.49+47_49+48insC
c.49+47_49+48insC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49162985
chrX:49162986 T
T
 C
C
 2 a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0010
a0001c0001t0001g0011
 2 NA19006.hp1
NA19086.hp1
NA19006.hp1
NA19086.hp1
 intron_variant MODIFIER c.49+48T>C
c.49+48T>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49162986
chrX:49163013 C
C
 G
G
 5 a0000c0009t0008g0023
a0004c0006t0008g0008
a0004c0006t0030g0008
others(2): Show 
a0000c0009t0008g0023
a0004c0006t0008g0008
a0004c0006t0030g0008
a0004c0006t0031g0008
a0011c0008t0008g0008
 6 HG02622.hp1
HG03041.hp2
HG03453.hp1
others(3): Show 
HG02622.hp1
HG03041.hp2
HG03453.hp1
HG03471.hp1
HG03486.hp2
NA19030.hp2
 intron_variant MODIFIER c.49+75C>G
c.49+75C>G
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49163013
chrX:49163022 C
C
 A
A
 5 a0000c0009t0008g0023
a0004c0006t0008g0008
a0004c0006t0030g0008
others(2): Show 
a0000c0009t0008g0023
a0004c0006t0008g0008
a0004c0006t0030g0008
a0004c0006t0031g0008
a0011c0008t0008g0008
 6 HG02622.hp1
HG03041.hp2
HG03453.hp1
others(3): Show 
HG02622.hp1
HG03041.hp2
HG03453.hp1
HG03471.hp1
HG03486.hp2
NA19030.hp2
 intron_variant MODIFIER c.49+84C>A
c.49+84C>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49163022
chrX:49163139 G
G
 GC
GC
 1 a0001c0002t0002g0012
a0001c0002t0002g0012
 1 NA18977.hp1
NA18977.hp1
 intron_variant MODIFIER c.49+203dupC
c.49+203dupC
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 INFO_REALIGN_3_PRIME chrX 49163139
chrX:49163295 A
A
 AG
AG
 1 a0001c0001t0015g0022
a0001c0001t0015g0022
 1 NA19082.hp1
NA19082.hp1
 intron_variant MODIFIER c.49+362dupG
c.49+362dupG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 INFO_REALIGN_3_PRIME chrX 49163295
chrX:49163410 T
T
 C
C
 42 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0005
others(39): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0007
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0018
a0001c0001t0002g0001
a0001c0001t0004g0001
a0001c0001t0004g0003
a0001c0001t0004g0005
a0001c0001t0006g0001
a0001c0001t0012g0003
a0001c0001t0012g0019
a0001c0001t0013g0001
a0001c0001t0014g0001
a0001c0001t0015g0022
a0001c0001t0018g0015
a0001c0001t0019g0013
a0001c0001t0020g0001
a0001c0001t0021g0016
a0001c0001t0022g0003
a0001c0001t0025g0014
a0001c0001t0027g0001
a0001c0001t0028g0001
a0001c0001t0029g0003
a0001c0001t0034g0001
a0001c0001t0035g0001
a0001c0002t0002g0001
a0001c0002t0002g0012
a0001c0002t0002g0017
a0001c0002t0023g0001
a0001c0002t0024g0001
a0001c0002t0026g0001
a0001c0002t0032g0001
a0001c0005t0001g0001
a0001c0013t0004g0001
a0005c0007t0002g0001
a0007c0010t0001g0001
a0008c0012t0002g0001
a0009c0011t0001g0001
a0010c0014t0001g0001
 204 HG00140.hp1
HG00280.hp1
HG00323.hp1
others(201): Show 
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01169.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01361.hp1
HG01361.hp2
HG01433.hp1
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp2
HG02602.hp1
HG02622.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02723.hp2
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02818.hp2
HG02896.hp1
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03139.hp1
HG03225.hp1
HG03453.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18950.hp1
NA18950.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18956.hp2
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18997.hp1
NA18997.hp2
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19062.hp1
NA19063.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20129.hp1
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.50-373T>C
c.50-373T>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49163410
chrX:49163413 G
G
 C
C
 36 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0007
others(33): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0007
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0018
a0001c0001t0002g0001
a0001c0001t0004g0001
a0001c0001t0004g0005
a0001c0001t0006g0001
a0001c0001t0013g0001
a0001c0001t0014g0001
a0001c0001t0015g0022
a0001c0001t0018g0015
a0001c0001t0019g0013
a0001c0001t0020g0001
a0001c0001t0021g0016
a0001c0001t0025g0014
a0001c0001t0027g0001
a0001c0001t0028g0001
a0001c0001t0034g0001
a0001c0001t0035g0001
a0001c0002t0002g0001
a0001c0002t0002g0012
a0001c0002t0002g0017
a0001c0002t0023g0001
a0001c0002t0024g0001
a0001c0002t0026g0001
a0001c0002t0032g0001
a0001c0005t0001g0001
a0001c0013t0004g0001
a0005c0007t0002g0001
a0007c0010t0001g0001
a0008c0012t0002g0001
a0009c0011t0001g0001
a0010c0014t0001g0001
 191 HG00140.hp1
HG00280.hp1
HG00323.hp1
others(188): Show 
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01070.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01169.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01361.hp1
HG01361.hp2
HG01433.hp1
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01928.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02109.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp2
HG02602.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02723.hp2
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02818.hp2
HG02970.hp1
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03225.hp1
HG03453.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18950.hp1
NA18950.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18956.hp2
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18997.hp1
NA18997.hp2
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19055.hp1
NA19056.hp1
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19062.hp1
NA19063.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20129.hp1
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.50-370G>C
c.50-370G>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49163413
chrX:49163588 CG
CG
 C
C
 1 a0001c0001t0015g0022
a0001c0001t0015g0022
 1 NA19082.hp1
NA19082.hp1
 intron_variant MODIFIER c.50-190delG
c.50-190delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 INFO_REALIGN_3_PRIME chrX 49163588
chrX:49163625 C
C
 CAT
CAT
 1 a0001c0001t0012g0019
a0001c0001t0012g0019
 1 HG03540.hp2
HG03540.hp2
 intron_variant MODIFIER c.50-158_50-157insAT
c.50-158_50-157insAT
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49163625
chrX:49163627 T
T
 A
A
 1 a0001c0001t0012g0019
a0001c0001t0012g0019
 1 HG03540.hp2
HG03540.hp2
 intron_variant MODIFIER c.50-156T>A
c.50-156T>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 chrX 49163627
chrX:49163629 AG
AG
 A
A
 1 a0001c0001t0015g0022
a0001c0001t0015g0022
 1 NA19082.hp1
NA19082.hp1
 intron_variant MODIFIER c.50-150delG
c.50-150delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 INFO_REALIGN_3_PRIME chrX 49163629
chrX:49163683 C
C
 CG
CG
 1 a0001c0001t0019g0013
a0001c0001t0019g0013
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.50-97dupG
c.50-97dupG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 1/5 INFO_REALIGN_3_PRIME chrX 49163683
chrX:49163969 G
G
 A
A
 1 a0001c0001t0001g0007
a0001c0001t0001g0007
 5 HG01258.hp1
HG01975.hp1
HG02148.hp1
others(2): Show 
HG01258.hp1
HG01975.hp1
HG02148.hp1
HG02273.hp1
HG02300.hp1
 intron_variant MODIFIER c.196+40G>A
c.196+40G>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 chrX 49163969
chrX:49163999 T
T
 TG
TG
 1 a0001c0001t0025g0014
a0001c0001t0025g0014
 1 HG02738.hp1
HG02738.hp1
 intron_variant MODIFIER c.196+76dupG
c.196+76dupG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 INFO_REALIGN_3_PRIME chrX 49163999
chrX:49164039 AG
AG
 A
A
 1 a0001c0001t0018g0015
a0001c0001t0018g0015
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.196+114delG
c.196+114delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 INFO_REALIGN_3_PRIME chrX 49164039
chrX:49164052 G
G
 A
A
 1 a0000c0009t0008g0023
a0000c0009t0008g0023
 1 HG03471.hp1
HG03471.hp1
 intron_variant MODIFIER c.196+123G>A
c.196+123G>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 chrX 49164052
chrX:49164178 G
G
 T
T
 5 a0002c0003t0001g0004
a0002c0003t0004g0004
a0002c0003t0005g0004
others(2): Show 
a0002c0003t0001g0004
a0002c0003t0004g0004
a0002c0003t0005g0004
a0002c0003t0005g0021
a0002c0003t0033g0004
 12 HG00741.hp1
HG01070.hp2
HG01884.hp1
others(9): Show 
HG00741.hp1
HG01070.hp2
HG01884.hp1
HG02280.hp2
HG02647.hp1
HG02886.hp2
HG02895.hp1
HG02897.hp2
HG03130.hp1
HG03195.hp1
HG06807.hp2
NA18906.hp2
 intron_variant MODIFIER c.196+249G>T
c.196+249G>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 chrX 49164178
chrX:49164218 T
T
 TG
TG
 1 a0001c0001t0015g0022
a0001c0001t0015g0022
 1 NA19082.hp1
NA19082.hp1
 intron_variant MODIFIER c.196+295dupG
c.196+295dupG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 INFO_REALIGN_3_PRIME chrX 49164218
chrX:49164220 G
G
 C
C
 1 a0003c0004t0011g0009
a0003c0004t0011g0009
 2 HG02280.hp1
HG02723.hp1
HG02280.hp1
HG02723.hp1
 intron_variant MODIFIER c.196+291G>C
c.196+291G>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 chrX 49164220
chrX:49164344 C
C
 A
A
 6 a0001c0001t0001g0003
a0001c0001t0004g0003
a0001c0001t0012g0003
others(3): Show 
a0001c0001t0001g0003
a0001c0001t0004g0003
a0001c0001t0012g0003
a0001c0001t0012g0019
a0001c0001t0022g0003
a0001c0001t0029g0003
 13 HG01081.hp1
HG02055.hp1
HG02109.hp2
others(10): Show 
HG01081.hp1
HG02055.hp1
HG02109.hp2
HG02257.hp2
HG02622.hp2
HG02896.hp1
HG02965.hp1
HG02976.hp1
HG03139.hp1
HG03516.hp1
HG03540.hp2
HG06807.hp1
NA19043.hp1
 intron_variant MODIFIER c.197-363C>A
c.197-363C>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 chrX 49164344
chrX:49164374 T
T
 C
C
 1 a0001c0001t0003g0020
a0001c0001t0003g0020
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.197-333T>C
c.197-333T>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 chrX 49164374
chrX:49164394 TG
TG
 T
T
 1 a0001c0001t0019g0013
a0001c0001t0019g0013
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.197-310delG
c.197-310delG
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 INFO_REALIGN_3_PRIME chrX 49164394
chrX:49164482 C
C
 T
T
 1 a0001c0001t0001g0018
a0001c0001t0001g0018
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.197-225C>T
c.197-225C>T
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 chrX 49164482
chrX:49164625 G
G
 GA
GA
 1 a0001c0001t0021g0016
a0001c0001t0021g0016
 1 NA18989.hp1
NA18989.hp1
 intron_variant MODIFIER c.197-80dupA
c.197-80dupA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 2/5 INFO_REALIGN_3_PRIME chrX 49164625
chrX:49165120 G
G
 A
A
 1 a0002c0003t0005g0021
a0002c0003t0005g0021
 1 NA18906.hp2
NA18906.hp2
 intron_variant MODIFIER c.507+30G>A
c.507+30G>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 4/5 chrX 49165120
chrX:49165385 T
T
 C
C
 3 a0001c0001t0001g0005
a0001c0001t0004g0005
a0001c0001t0019g0013
a0001c0001t0001g0005
a0001c0001t0004g0005
a0001c0001t0019g0013
 9 HG02056.hp1
NA18940.hp1
NA18948.hp1
others(6): Show 
HG02056.hp1
NA18940.hp1
NA18948.hp1
NA18950.hp2
NA18970.hp1
NA18997.hp2
NA19005.hp1
NA19065.hp1
NA19091.hp1
 intron_variant MODIFIER c.679+24T>C
c.679+24T>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 5/5 chrX 49165385
chrX:49165390 G
G
 A
A
 1 a0001c0002t0002g0017
a0001c0002t0002g0017
 1 HG03927.hp1
HG03927.hp1
 intron_variant MODIFIER c.679+29G>A
c.679+29G>A
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 5/5 chrX 49165390
chrX:49165408 A
A
 C
C
 1 a0001c0001t0003g0020
a0001c0001t0003g0020
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.679+47A>C
c.679+47A>C
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 5/5 chrX 49165408
chrX:49165614 GA
GA
 G
G
 1 a0001c0001t0018g0015
a0001c0001t0018g0015
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.679+255delA
c.679+255delA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 5/5 INFO_REALIGN_3_PRIME chrX 49165614
chrX:49165615 A
A
 G
G
 55 a0000c0009t0008g0023
a0001c0001t0001g0001
a0001c0001t0001g0003
others(52): Show 
a0000c0009t0008g0023
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0007
a0001c0001t0001g0010
a0001c0001t0001g0011
a0001c0001t0001g0018
a0001c0001t0002g0001
a0001c0001t0004g0001
a0001c0001t0004g0003
a0001c0001t0004g0005
a0001c0001t0006g0001
a0001c0001t0012g0003
a0001c0001t0012g0019
a0001c0001t0013g0001
a0001c0001t0014g0001
a0001c0001t0015g0022
a0001c0001t0019g0013
a0001c0001t0020g0001
a0001c0001t0021g0016
a0001c0001t0022g0003
a0001c0001t0025g0014
a0001c0001t0027g0001
a0001c0001t0028g0001
a0001c0001t0029g0003
a0001c0001t0034g0001
a0001c0001t0035g0001
a0001c0002t0002g0001
a0001c0002t0002g0012
a0001c0002t0002g0017
a0001c0002t0023g0001
a0001c0002t0024g0001
a0001c0002t0026g0001
a0001c0002t0032g0001
a0001c0005t0001g0001
a0001c0013t0004g0001
a0002c0003t0001g0004
a0002c0003t0004g0004
a0002c0003t0005g0004
a0002c0003t0005g0021
a0002c0003t0033g0004
a0003c0004t0001g0006
a0003c0004t0002g0006
a0003c0004t0011g0009
a0004c0006t0008g0008
a0004c0006t0030g0008
a0004c0006t0031g0008
a0005c0007t0002g0001
a0006c0015t0001g0006
a0007c0010t0001g0001
a0008c0012t0002g0001
a0009c0011t0001g0001
a0010c0014t0001g0001
a0011c0008t0008g0008
 230 HG00140.hp1
HG00280.hp1
HG00323.hp1
others(227): Show 
HG00140.hp1
HG00280.hp1
HG00323.hp1
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01169.hp1
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01346.hp2
HG01358.hp1
HG01361.hp1
HG01361.hp2
HG01433.hp1
HG01515.hp1
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp1
HG01891.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02559.hp1
HG02602.hp1
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02896.hp1
HG02897.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03834.hp2
HG03927.hp1
HG03927.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18747.hp1
NA18906.hp2
NA18940.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18950.hp1
NA18950.hp2
NA18952.hp1
NA18953.hp1
NA18956.hp1
NA18956.hp2
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18985.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA18997.hp1
NA18997.hp2
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19062.hp1
NA19063.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20129.hp1
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.679+254A>G
c.679+254A>G
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 5/5 chrX 49165615
chrX:49165748 GA
GA
 G
G
 1 a0001c0001t0018g0015
a0001c0001t0018g0015
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.680-321delA
c.680-321delA
MAGIX ENSG00000269313.6 transcript ENST00000595224.6 protein_coding 5/5 INFO_REALIGN_3_PRIME chrX 49165748

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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