Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| geneid | 100132399 |
|---|---|
| ensemblid | ENSG00000227488.3 |
| hgncid | 31904 |
| symbol | GAGE12D |
| name | G antigen 12D |
| refseq_nuc | NM_001127199.3 |
| refseq_prot | NP_001120671.1 |
| ensembl_nuc | ENST00000405679.4 |
| ensembl_prot | ENSP00000384214.3 |
| mane_status | MANE Select |
| chr | chrX |
| start | 49541733 |
| end | 49549094 |
| strand | + |
| ver | v1.2 |
| region | chrX:49541733-49549094 |
| region5000 | chrX:49536733-49554094 |
| regionname0 | GAGE12D_chrX_49541733_49549094 |
| regionname5000 | GAGE12D_chrX_49536733_49554094 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 117 | 29 | 2 | 13 | 12 | 0 | 2 | 11 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0002 | 0/0 | 116 | 11 | 1 | 3 | 6 | 0 | 1 | 4 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0003 | 0/0 | 117 | 11 | 3 | 2 | 5 | 0 | 1 | 5 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0004 | 0/0 | 117 | 8 | 0 | 1 | 5 | 1 | 1 | 4 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0005 | 0/0 | 116 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0006 | 0/0 | 117 | 3 | 0 | 0 | 0 | 1 | 2 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0007 | 0/0 | 117 | 2 | 0 | 0 | 2 | 0 | 0 | 2 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0008 | 0/0 | 116 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0009 | 0/0 | 22 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0010 | 0/0 | 117 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0011 | 0/0 | 86 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0012 | 0/0 | 117 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| chapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 0/0 | 354 | 29 | 2 | 13 | 12 | 0 | 2 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0002 | 0/0 | 351 | 11 | 1 | 3 | 6 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0003 | 0/0 | 354 | 11 | 3 | 2 | 5 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0004 | 0/0 | 354 | 8 | 0 | 1 | 5 | 1 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0005 | 0/0 | 351 | 3 | 3 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0006 | 0/0 | 354 | 3 | 0 | 0 | 0 | 1 | 2 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0007 | 0/0 | 354 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0008 | 0/0 | 351 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0009 | 0/0 | 355 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0010 | 0/0 | 354 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0011 | 0/0 | 354 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| c0012 | 0/0 | 353 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| thapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 0/0 | 208 | 33 | 5 | 8 | 15 | 1 | 4 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| t0002 | 0/0 | 208 | 23 | 3 | 8 | 7 | 1 | 4 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| t0003 | 0/0 | 208 | 7 | 1 | 2 | 4 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| t0004 | 0/0 | 208 | 7 | 0 | 3 | 3 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| t0005 | 0/0 | 208 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| t0006 | 0/0 | 208 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| ghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/0 | 5 | 0 | 3 | 2 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0002 | 0/0 | 5 | 0 | 2 | 2 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0003 | 0/0 | 3 | 0 | 1 | 1 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0004 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0005 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0006 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0007 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0008 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0009 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0010 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0011 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0016 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0018 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0019 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0022 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0024 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0025 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0026 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0027 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0028 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0030 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0031 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0033 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0036 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0037 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0039 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0041 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0042 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0045 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0046 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0047 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0049 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0050 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0051 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0052 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0055 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0056 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0057 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| g0058 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| achapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 354 | 29 | 2 | 13 | 12 | 0 | 2 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0002c0002 | 0/0 | 351 | 11 | 1 | 3 | 6 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0003c0003 | 0/0 | 354 | 11 | 3 | 2 | 5 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0004c0004 | 0/0 | 354 | 8 | 0 | 1 | 5 | 1 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0005c0005 | 0/0 | 351 | 3 | 3 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0006c0006 | 0/0 | 354 | 3 | 0 | 0 | 0 | 1 | 2 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0007c0007 | 0/0 | 354 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0008c0008 | 0/0 | 351 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0009c0012 | 0/0 | 353 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0010c0010 | 0/0 | 354 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0011c0009 | 0/0 | 355 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0012c0011 | 0/0 | 354 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 561 | 11 | 0 | 5 | 5 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0001c0001t0002 | 0/0 | 561 | 15 | 2 | 7 | 5 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0001c0001t0003 | 0/0 | 561 | 2 | 0 | 1 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0001c0001t0006 | 0/0 | 561 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0002c0002t0001 | 0/0 | 558 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0002c0002t0003 | 0/0 | 558 | 4 | 0 | 1 | 3 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0002c0002t0004 | 0/0 | 558 | 6 | 0 | 2 | 3 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0003c0003t0001 | 0/0 | 561 | 11 | 3 | 2 | 5 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0004c0004t0001 | 0/0 | 561 | 8 | 0 | 1 | 5 | 1 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0005c0005t0001 | 0/0 | 558 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0005c0005t0003 | 0/0 | 558 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0005c0005t0005 | 0/0 | 558 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0006c0006t0002 | 0/0 | 561 | 3 | 0 | 0 | 0 | 1 | 2 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0007c0007t0002 | 0/0 | 561 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0008c0008t0004 | 0/0 | 558 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0009c0012t0001 | 0/0 | 560 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0010c0010t0002 | 0/0 | 561 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0011c0009t0002 | 0/0 | 562 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| a0012c0011t0002 | 0/0 | 561 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | copy fasta | chrX | 49536733 | 49554094 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0002 | 0/0 | 5 | 0 | 2 | 2 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0001g0007 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0001g0008 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0001g0016 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0001g0042 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0001g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0001g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0006 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0009 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0022 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0024 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0025 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0026 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0028 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0049 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0051 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0052 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0057 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0002g0058 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0003g0047 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0003g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0001c0001t0006g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0001g0050 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0003g0001 | 0/0 | 3 | 0 | 1 | 2 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0003g0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0004g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0004g0004 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0004g0010 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0004g0011 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0002c0002t0004g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0007 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0031 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0036 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0037 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0039 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0041 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0003c0003t0001g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0004c0004t0001g0003 | 0/0 | 3 | 0 | 1 | 1 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0004c0004t0001g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0004c0004t0001g0030 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0004c0004t0001g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0004c0004t0001g0033 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0004c0004t0001g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0005c0005t0001g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0005c0005t0003g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0005c0005t0005g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0006c0006t0002g0018 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0006c0006t0002g0019 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0006c0006t0002g0045 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0007c0007t0002g0005 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0008c0008t0004g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0009c0012t0001g0056 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0010c0010t0002g0027 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0011c0009t0002g0055 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| a0012c0011t0002g0046 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00544 | hp1 | a0004 | c0004 | t0001 | g0030 | EAS | CHS | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG00544 | hp2 | a0002 | c0002 | t0003 | g0013 | EAS | CHS | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG00621 | hp1 | a0001 | c0001 | t0002 | g0020 | EAS | CHS | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG00642 | hp1 | a0012 | c0011 | t0002 | g0046 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01071 | hp1 | a0003 | c0003 | t0001 | g0041 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01071 | hp2 | a0001 | c0001 | t0002 | g0024 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01099 | hp1 | a0001 | c0001 | t0002 | g0026 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01106 | hp1 | a0001 | c0001 | t0002 | g0049 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01169 | hp1 | a0001 | c0001 | t0002 | g0057 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01169 | hp2 | a0001 | c0001 | t0002 | g0009 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0007 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01175 | hp2 | a0002 | c0002 | t0003 | g0001 | AMR | PUR | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01257 | hp2 | a0008 | c0008 | t0004 | g0001 | AMR | CLM | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01517 | hp1 | a0004 | c0004 | t0001 | g0033 | EUR | IBS | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01517 | hp2 | a0006 | c0006 | t0002 | g0018 | EUR | IBS | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01975 | hp1 | a0003 | c0003 | t0001 | g0036 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01975 | hp2 | a0002 | c0002 | t0004 | g0004 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01978 | hp1 | a0001 | c0001 | t0002 | g0006 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01978 | hp2 | a0001 | c0001 | t0002 | g0025 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0008 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG01981 | hp2 | a0001 | c0001 | t0003 | g0047 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02015 | hp1 | a0002 | c0002 | t0003 | g0001 | EAS | KHV | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02258 | hp1 | a0003 | c0003 | t0001 | g0037 | AFR | ACB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02273 | hp1 | a0002 | c0002 | t0004 | g0001 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02273 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02280 | hp1 | a0001 | c0001 | t0002 | g0052 | AFR | ACB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02280 | hp2 | a0001 | c0001 | t0002 | g0051 | AFR | ACB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02293 | hp1 | a0004 | c0004 | t0001 | g0003 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0016 | AMR | PEL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02572 | hp1 | a0003 | c0003 | t0001 | g0031 | AFR | GWD | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02922 | hp1 | a0002 | c0002 | t0001 | g0050 | AFR | ESN | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG02922 | hp2 | a0005 | c0005 | t0005 | g0015 | AFR | ESN | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03516 | hp1 | a0003 | c0003 | t0001 | g0007 | AFR | ESN | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03516 | hp2 | a0010 | c0010 | t0002 | g0027 | AFR | ESN | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03704 | hp1 | a0002 | c0002 | t0004 | g0011 | SAS | PJL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03704 | hp2 | a0009 | c0012 | t0001 | g0056 | SAS | PJL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03710 | hp1 | a0004 | c0004 | t0001 | g0003 | SAS | PJL | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03831 | hp1 | a0011 | c0009 | t0002 | g0055 | SAS | BEB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03831 | hp2 | a0003 | c0003 | t0001 | g0054 | SAS | BEB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03927 | hp1 | a0006 | c0006 | t0002 | g0045 | SAS | BEB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03927 | hp2 | a0001 | c0001 | t0002 | g0058 | SAS | BEB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | BEB | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18939 | hp1 | a0004 | c0004 | t0001 | g0032 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18939 | hp2 | a0004 | c0004 | t0001 | g0029 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18947 | hp1 | a0003 | c0003 | t0001 | g0035 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18947 | hp2 | a0007 | c0007 | t0002 | g0005 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18963 | hp1 | a0003 | c0003 | t0001 | g0039 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18963 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18969 | hp1 | a0001 | c0001 | t0003 | g0048 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18969 | hp2 | a0001 | c0001 | t0002 | g0022 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18973 | hp1 | a0001 | c0001 | t0002 | g0021 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18973 | hp2 | a0007 | c0007 | t0002 | g0005 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18983 | hp1 | a0002 | c0002 | t0003 | g0001 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18987 | hp1 | a0001 | c0001 | t0001 | g0053 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA18987 | hp2 | a0003 | c0003 | t0001 | g0034 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19001 | hp1 | a0001 | c0001 | t0001 | g0043 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19001 | hp2 | a0001 | c0001 | t0001 | g0042 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19003 | hp1 | a0001 | c0001 | t0002 | g0028 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19003 | hp2 | a0001 | c0001 | t0006 | g0023 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19004 | hp1 | a0001 | c0001 | t0002 | g0006 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19063 | hp1 | a0003 | c0003 | t0001 | g0040 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19065 | hp1 | a0004 | c0004 | t0001 | g0044 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19065 | hp2 | a0002 | c0002 | t0004 | g0010 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19082 | hp1 | a0003 | c0003 | t0001 | g0038 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19084 | hp1 | a0004 | c0004 | t0001 | g0003 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19084 | hp2 | a0002 | c0002 | t0004 | g0004 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19090 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19090 | hp2 | a0002 | c0002 | t0004 | g0012 | EAS | JPT | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19240 | hp1 | a0005 | c0005 | t0003 | g0017 | AFR | YRI | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA19240 | hp2 | a0005 | c0005 | t0001 | g0014 | AFR | YRI | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| NA20905 | hp1 | a0006 | c0006 | t0002 | g0019 | SAS | GIH | GAGE12D_chrX_49536733_49554094 | GAGE12D | chrX | 49536733 | 49554094 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49542911
|
CTAT | C | 3 | a0002a0005a0008 | 15 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(12): Show |
disruptive_inframe_deletion | MODERATE | c.29_31delATT | p.Tyr10del | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/5 | 145/561 | 29/354 | 10/117 | INFO_REALIGN_3_PRIME | chrX | 49542911 | |
| chrX:49542918
|
T | C | 3 | a0002a0005a0008 | 15 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(12): Show |
missense_variant | MODERATE | c.31T>C | p.Trp11Arg | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/5 | 147/561 | 31/354 | 11/117 | chrX | 49542918 | ||
| chrX:49542942
|
C | G | 3 | a0002a0005a0008 | 15 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(12): Show |
missense_variant | MODERATE | c.55C>G | p.Gln19Glu | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/5 | 171/561 | 55/354 | 19/117 | chrX | 49542942 | ||
| chrX:49542944
|
GC | G | 1 | a0009 | 1 | HG03704.hp2 | frameshift_variant | HIGH | c.59delC | p.Pro20fs | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/5 | 175/561 | 59/354 | 20/117 | INFO_REALIGN_3_PRIME | chrX | 49542944 | |
| chrX:49542954
|
A | G | 2 | a0007a0012 | 3 | HG00642.hp1 NA18947.hp2 NA18973.hp2 |
missense_variant | MODERATE | c.67A>G | p.Met23Val | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/5 | 183/561 | 67/354 | 23/117 | chrX | 49542954 | ||
| chrX:49543500
|
T | C | 10 | a0001a0002a0005others(7): Show | 53 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(50): Show |
missense_variant | MODERATE | c.148T>C | p.Cys50Arg | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/5 | 264/561 | 148/354 | 50/117 | chrX | 49543500 | ||
| chrX:49543524
|
G | A | 1 | a0004 | 8 | HG00544.hp1 HG01517.hp1 HG02293.hp1 others(5): Show |
missense_variant | MODERATE | c.172G>A | p.Glu58Lys | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/5 | 288/561 | 172/354 | 58/117 | chrX | 49543524 | ||
| chrX:49543530
|
G | C | 1 | a0005 | 3 | HG02922.hp2 NA19240.hp1 NA19240.hp2 |
missense_variant | MODERATE | c.178G>C | p.Glu60Gln | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/5 | 294/561 | 178/354 | 60/117 | chrX | 49543530 | ||
| chrX:49546397
|
C | G | 4 | a0006a0008a0010others(1): Show | 6 | HG00642.hp1 HG01257.hp2 HG01517.hp2 others(3): Show |
missense_variant | MODERATE | c.223C>G | p.His75Asp | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/5 | 339/561 | 223/354 | 75/117 | chrX | 49546397 | ||
| chrX:49546426
|
T | TG | 1 | a0011 | 1 | HG03831.hp1 | frameshift_variant | HIGH | c.255dupG | p.Cys86fs | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/5 | 372/561 | 256/354 | 86/117 | INFO_REALIGN_3_PRIME | chrX | 49546426 | |
| chrX:49548989
|
C | A | 1 | a0010 | 1 | HG03516.hp2 | missense_variant | MODERATE | c.340C>A | p.Gln114Lys | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 5/5 | 456/561 | 340/354 | 114/117 | chrX | 49548989 |
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49542932
|
G | A | 3 | a0002c0002a0005c0005a0008c0008 | 15 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(12): Show |
synonymous_variant | LOW | c.45G>A | p.Arg15Arg | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/5 | 161/561 | 45/354 | 15/117 | chrX | 49542932 | ||
| chrX:49542938
|
T | C | 3 | a0002c0002a0005c0005a0008c0008 | 15 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(12): Show |
synonymous_variant | LOW | c.51T>C | p.Tyr17Tyr | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/5 | 167/561 | 51/354 | 17/117 | chrX | 49542938 |
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49541734
|
T | C | 6 | a0001c0001t0003a0002c0002t0003a0002c0002t0004others(3): Show | 15 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(12): Show |
5_prime_UTR_variant | MODIFIER | c.-115T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/5 | 1154 | chrX | 49541734 | |||||
| chrX:49541753
|
G | A | 1 | a0001c0001t0006 | 1 | NA19003.hp2 | 5_prime_UTR_variant | MODIFIER | c.-96G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/5 | 1135 | chrX | 49541753 | |||||
| chrX:49541827
|
C | T | 2 | a0002c0002t0004a0008c0008t0004 | 7 | HG01257.hp2 HG01975.hp2 HG02273.hp1 others(4): Show |
5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-22C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/5 | chrX | 49541827 | ||||||
| chrX:49549010
|
A | G | 12 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(9): Show | 38 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(35): Show |
3_prime_UTR_variant | MODIFIER | c.*7A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 5/5 | 7 | chrX | 49549010 |
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49541884
|
AG | A | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.-9+47delG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49541884 | |||||
| chrX:49541960
|
G | GT | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-9+120_-9+121insT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49541960 | ||||||
| chrX:49541960
|
G | T | 1 | a0001c0001t0002g0057 | 1 | HG01169.hp1 | intron_variant | MODIFIER | c.-9+120G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49541960 | ||||||
| chrX:49541972
|
TC | T | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-9+135delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49541972 | |||||
| chrX:49542013
|
T | TG | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-9+174dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542013 | |||||
| chrX:49542016
|
A | AG | 2 | a0003c0003t0001g0054a0011c0009t0002g0055 | 2 | HG03831.hp1 HG03831.hp2 |
intron_variant | MODIFIER | c.-9+180dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542016 | |||||
| chrX:49542039
|
T | TG | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-9+202dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542039 | |||||
| chrX:49542049
|
AG | A | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-9+213delG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542049 | |||||
| chrX:49542057
|
C | CG | 1 | a0001c0001t0001g0008 | 1 | HG01981.hp1 | intron_variant | MODIFIER | c.-9+219dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542057 | |||||
| chrX:49542066
|
G | T | 5 | a0001c0001t0001g0053a0001c0001t0002g0051a0001c0001t0002g0052others(2): Show | 5 | HG02280.hp1 HG02280.hp2 HG02922.hp1 others(2): Show |
intron_variant | MODIFIER | c.-9+226G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542066 | ||||||
| chrX:49542070
|
A | AG | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-9+232dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542070 | |||||
| chrX:49542079
|
C | CG | 1 | a0001c0001t0002g0009 | 1 | HG01169.hp2 | intron_variant | MODIFIER | c.-9+243dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542079 | |||||
| chrX:49542122
|
G | GA | 8 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(5): Show | 11 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(8): Show |
intron_variant | MODIFIER | c.-9+283dupA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542122 | |||||
| chrX:49542124
|
T | C | 8 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(5): Show | 11 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(8): Show |
intron_variant | MODIFIER | c.-9+284T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542124 | ||||||
| chrX:49542128
|
C | T | 1 | a0001c0001t0002g0049 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.-9+288C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542128 | ||||||
| chrX:49542131
|
C | T | 2 | a0001c0001t0003g0047a0001c0001t0003g0048 | 2 | HG01981.hp2 NA18969.hp1 |
intron_variant | MODIFIER | c.-9+291C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542131 | ||||||
| chrX:49542146
|
TC | T | 1 | a0001c0001t0002g0057 | 1 | HG01169.hp1 | intron_variant | MODIFIER | c.-9+309delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542146 | |||||
| chrX:49542153
|
A | G | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.-9+313A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542153 | ||||||
| chrX:49542154
|
T | TG | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.-9+318dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542154 | |||||
| chrX:49542159
|
C | T | 8 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(5): Show | 11 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(8): Show |
intron_variant | MODIFIER | c.-9+319C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542159 | ||||||
| chrX:49542166
|
C | CG | 2 | a0001c0001t0003g0048a0006c0006t0002g0045 | 2 | HG03927.hp1 NA18969.hp1 |
intron_variant | MODIFIER | c.-9+331dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542166 | |||||
| chrX:49542178
|
G | A | 5 | a0001c0001t0001g0016a0002c0002t0001g0050a0005c0005t0001g0014others(2): Show | 5 | HG02293.hp2 HG02922.hp1 HG02922.hp2 others(2): Show |
intron_variant | MODIFIER | c.-9+338G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542178 | ||||||
| chrX:49542215
|
C | G | 6 | a0001c0001t0001g0016a0002c0002t0001g0050a0004c0004t0001g0044others(3): Show | 6 | HG02293.hp2 HG02922.hp1 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.-9+375C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542215 | ||||||
| chrX:49542222
|
G | T | 4 | a0001c0001t0001g0008a0001c0001t0001g0043a0001c0001t0001g0053others(1): Show | 4 | HG01981.hp1 HG03704.hp2 NA18987.hp1 others(1): Show |
intron_variant | MODIFIER | c.-9+382G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542222 | ||||||
| chrX:49542223
|
C | T | 8 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(5): Show | 11 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(8): Show |
intron_variant | MODIFIER | c.-9+383C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542223 | ||||||
| chrX:49542227
|
C | T | 1 | a0003c0003t0001g0054 | 1 | HG03831.hp2 | intron_variant | MODIFIER | c.-9+387C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542227 | ||||||
| chrX:49542228
|
G | C | 6 | a0001c0001t0001g0016a0002c0002t0001g0050a0004c0004t0001g0044others(3): Show | 6 | HG02293.hp2 HG02922.hp1 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.-9+388G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542228 | ||||||
| chrX:49542228
|
G | GC | 26 | a0001c0001t0001g0008a0001c0001t0001g0043a0001c0001t0001g0053others(23): Show | 28 | HG00621.hp1 HG00642.hp1 HG01071.hp2 others(25): Show |
intron_variant | MODIFIER | c.-9+393dupC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542228 | |||||
| chrX:49542228
|
G | GCC | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-9+392_-9+393dupCC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542228 | |||||
| chrX:49542234
|
T | C | 34 | a0001c0001t0001g0008a0001c0001t0001g0016a0001c0001t0001g0043others(31): Show | 36 | HG00621.hp1 HG00642.hp1 HG01071.hp2 others(33): Show |
intron_variant | MODIFIER | c.-9+394T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542234 | ||||||
| chrX:49542234
|
T | G | 8 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(5): Show | 11 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(8): Show |
intron_variant | MODIFIER | c.-9+394T>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542234 | ||||||
| chrX:49542303
|
C | G | 1 | a0001c0001t0002g0028 | 1 | NA19003.hp1 | intron_variant | MODIFIER | c.-9+463C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542303 | ||||||
| chrX:49542304
|
GA | G | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.-9+468delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542304 | |||||
| chrX:49542340
|
C | G | 1 | a0005c0005t0003g0017 | 1 | NA19240.hp1 | intron_variant | MODIFIER | c.-9+500C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542340 | ||||||
| chrX:49542358
|
A | AG | 2 | a0001c0001t0003g0048a0006c0006t0002g0045 | 2 | HG03927.hp1 NA18969.hp1 |
intron_variant | MODIFIER | c.-9+519dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542358 | |||||
| chrX:49542359
|
G | A | 1 | a0001c0001t0002g0057 | 1 | HG01169.hp1 | intron_variant | MODIFIER | c.-9+519G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542359 | ||||||
| chrX:49542360
|
T | G | 48 | a0001c0001t0001g0008a0001c0001t0001g0016a0001c0001t0001g0043others(45): Show | 55 | HG00544.hp1 HG00544.hp2 HG00621.hp1 others(52): Show |
intron_variant | MODIFIER | c.-9+520T>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542360 | ||||||
| chrX:49542379
|
G | C | 4 | a0001c0001t0001g0008a0001c0001t0001g0043a0001c0001t0001g0053others(1): Show | 4 | HG01981.hp1 HG03704.hp2 NA18987.hp1 others(1): Show |
intron_variant | MODIFIER | c.-8-501G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542379 | ||||||
| chrX:49542397
|
A | C | 2 | a0002c0002t0001g0050a0005c0005t0003g0017 | 2 | HG02922.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.-8-483A>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542397 | ||||||
| chrX:49542430
|
G | GT | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-8-446dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542430 | |||||
| chrX:49542437
|
TG | T | 2 | a0001c0001t0002g0009a0011c0009t0002g0055 | 2 | HG01169.hp2 HG03831.hp1 |
intron_variant | MODIFIER | c.-8-439delG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542437 | |||||
| chrX:49542514
|
T | G | 35 | a0001c0001t0001g0008a0001c0001t0001g0016a0001c0001t0001g0043others(32): Show | 40 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(37): Show |
intron_variant | MODIFIER | c.-8-366T>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542514 | ||||||
| chrX:49542515
|
TC | T | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.-8-362delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542515 | |||||
| chrX:49542526
|
G | C | 2 | a0002c0002t0004g0004a0002c0002t0004g0010 | 3 | HG01975.hp2 NA19065.hp2 NA19084.hp2 |
intron_variant | MODIFIER | c.-8-354G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542526 | ||||||
| chrX:49542539
|
T | TG | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-8-338dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542539 | |||||
| chrX:49542547
|
TC | T | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-8-330delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542547 | |||||
| chrX:49542564
|
C | G | 6 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(3): Show | 8 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(5): Show |
intron_variant | MODIFIER | c.-8-316C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542564 | ||||||
| chrX:49542588
|
C | CA | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.-8-292_-8-291insA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542588 | ||||||
| chrX:49542630
|
TC | T | 1 | a0006c0006t0002g0018 | 1 | HG01517.hp2 | intron_variant | MODIFIER | c.-8-248delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542630 | |||||
| chrX:49542645
|
G | GA | 1 | a0001c0001t0002g0028 | 1 | NA19003.hp1 | intron_variant | MODIFIER | c.-8-228dupA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542645 | |||||
| chrX:49542645
|
GA | G | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.-8-228delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542645 | |||||
| chrX:49542767
|
AT | A | 1 | a0001c0001t0002g0009 | 1 | HG01169.hp2 | intron_variant | MODIFIER | c.-8-109delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542767 | |||||
| chrX:49542769
|
T | C | 14 | a0002c0002t0001g0050a0002c0002t0003g0001a0002c0002t0003g0013others(11): Show | 18 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(15): Show |
intron_variant | MODIFIER | c.-8-111T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542769 | ||||||
| chrX:49542783
|
CA | C | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.-8-93delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49542783 | |||||
| chrX:49542803
|
A | T | 13 | a0002c0002t0001g0050a0002c0002t0003g0001a0002c0002t0003g0013others(10): Show | 17 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(14): Show |
intron_variant | MODIFIER | c.-8-77A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542803 | ||||||
| chrX:49542813
|
C | G | 2 | a0005c0005t0003g0017a0005c0005t0005g0015 | 2 | HG02922.hp2 NA19240.hp1 |
intron_variant | MODIFIER | c.-8-67C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542813 | ||||||
| chrX:49542841
|
C | G | 29 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0021others(26): Show | 34 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(31): Show |
intron_variant | MODIFIER | c.-8-39C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542841 | ||||||
| chrX:49542863
|
C | T | 1 | a0001c0001t0001g0053 | 1 | NA18987.hp1 | intron_variant | MODIFIER | c.-8-17C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542863 | ||||||
| chrX:49542870
|
C | G | 2 | a0002c0002t0004g0004a0002c0002t0004g0010 | 3 | HG01975.hp2 NA19065.hp2 NA19084.hp2 |
intron_variant | MODIFIER | c.-8-10C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 1/4 | chrX | 49542870 | ||||||
| chrX:49542986
|
G | C | 1 | a0005c0005t0005g0015 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.84+15G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49542986 | ||||||
| chrX:49543027
|
A | C | 2 | a0007c0007t0002g0005a0012c0011t0002g0046 | 3 | HG00642.hp1 NA18947.hp2 NA18973.hp2 |
intron_variant | MODIFIER | c.84+56A>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543027 | ||||||
| chrX:49543034
|
C | T | 7 | a0002c0002t0001g0050a0002c0002t0004g0004a0002c0002t0004g0010others(4): Show | 8 | HG01975.hp2 HG02922.hp1 HG02922.hp2 others(5): Show |
intron_variant | MODIFIER | c.84+63C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543034 | ||||||
| chrX:49543044
|
G | C | 1 | a0007c0007t0002g0005 | 2 | NA18947.hp2 NA18973.hp2 |
intron_variant | MODIFIER | c.84+73G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543044 | ||||||
| chrX:49543049
|
GA | G | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.84+81delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49543049 | |||||
| chrX:49543078
|
TA | T | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.84+113delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49543078 | |||||
| chrX:49543088
|
G | T | 8 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(5): Show | 11 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(8): Show |
intron_variant | MODIFIER | c.84+117G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543088 | ||||||
| chrX:49543119
|
T | C | 2 | a0007c0007t0002g0005a0012c0011t0002g0046 | 3 | HG00642.hp1 NA18947.hp2 NA18973.hp2 |
intron_variant | MODIFIER | c.84+148T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543119 | ||||||
| chrX:49543125
|
A | AT | 5 | a0001c0001t0002g0006a0001c0001t0002g0026a0001c0001t0002g0028others(2): Show | 6 | HG01099.hp1 HG01978.hp1 HG03516.hp2 others(3): Show |
intron_variant | MODIFIER | c.84+164dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49543125 | |||||
| chrX:49543176
|
C | A | 5 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(2): Show | 5 | HG01169.hp1 HG01169.hp2 HG02280.hp1 others(2): Show |
intron_variant | MODIFIER | c.84+205C>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543176 | ||||||
| chrX:49543213
|
TC | T | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.85-222delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49543213 | |||||
| chrX:49543227
|
T | C | 8 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(5): Show | 11 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(8): Show |
intron_variant | MODIFIER | c.85-210T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543227 | ||||||
| chrX:49543235
|
C | T | 17 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(14): Show | 20 | HG00544.hp2 HG01169.hp1 HG01169.hp2 others(17): Show |
intron_variant | MODIFIER | c.85-202C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543235 | ||||||
| chrX:49543250
|
C | T | 2 | a0001c0001t0003g0047a0001c0001t0003g0048 | 2 | HG01981.hp2 NA18969.hp1 |
intron_variant | MODIFIER | c.85-187C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543250 | ||||||
| chrX:49543269
|
A | T | 4 | a0002c0002t0001g0050a0005c0005t0001g0014a0005c0005t0003g0017others(1): Show | 4 | HG02922.hp1 HG02922.hp2 NA19240.hp1 others(1): Show |
intron_variant | MODIFIER | c.85-168A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543269 | ||||||
| chrX:49543281
|
G | T | 2 | a0001c0001t0003g0047a0001c0001t0003g0048 | 2 | HG01981.hp2 NA18969.hp1 |
intron_variant | MODIFIER | c.85-156G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543281 | ||||||
| chrX:49543341
|
G | T | 17 | a0001c0001t0001g0008a0001c0001t0001g0043a0001c0001t0001g0053others(14): Show | 21 | HG00544.hp2 HG00642.hp1 HG01169.hp1 others(18): Show |
intron_variant | MODIFIER | c.85-96G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543341 | ||||||
| chrX:49543344
|
C | A | 4 | a0001c0001t0001g0008a0001c0001t0001g0043a0001c0001t0001g0053others(1): Show | 4 | HG01981.hp1 HG03704.hp2 NA18987.hp1 others(1): Show |
intron_variant | MODIFIER | c.85-93C>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543344 | ||||||
| chrX:49543400
|
C | CT | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.85-35dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49543400 | |||||
| chrX:49543403
|
AT | A | 1 | a0001c0001t0003g0048 | 1 | NA18969.hp1 | intron_variant | MODIFIER | c.85-28delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49543403 | |||||
| chrX:49543408
|
T | C | 24 | a0001c0001t0001g0002a0001c0001t0001g0007a0001c0001t0001g0016others(21): Show | 32 | HG00544.hp2 HG00642.hp1 HG01169.hp1 others(29): Show |
intron_variant | MODIFIER | c.85-29T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543408 | ||||||
| chrX:49543420
|
C | G | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.85-17C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | chrX | 49543420 | ||||||
| chrX:49543430
|
TC | T | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | splice_region_variant&intron_variant | LOW | c.85-3delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49543430 | |||||
| chrX:49543609
|
C | CGT | 6 | a0002c0002t0001g0050a0005c0005t0001g0014a0005c0005t0003g0017others(3): Show | 7 | HG00642.hp1 HG02922.hp1 HG02922.hp2 others(4): Show |
intron_variant | MODIFIER | c.205+64_205+65dupTG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49543609 | |||||
| chrX:49543624
|
A | ATGTG | 1 | a0011c0009t0002g0055 | 1 | HG03831.hp1 | intron_variant | MODIFIER | c.205+67_205+68insTG others(2): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543624 | ||||||
| chrX:49543624
|
A | ATGTGTGT others(7): Show |
1 | a0002c0002t0004g0004 | 2 | HG01975.hp2 NA19084.hp2 |
intron_variant | MODIFIER | c.205+67_205+68insTG others(12): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543624 | ||||||
| chrX:49543624
|
A | ATGTGTGT others(9): Show |
8 | a0001c0001t0002g0009a0001c0001t0002g0052a0002c0002t0003g0001others(5): Show | 10 | HG00544.hp2 HG01169.hp2 HG01175.hp2 others(7): Show |
intron_variant | MODIFIER | c.205+67_205+68insTG others(14): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543624 | ||||||
| chrX:49543624
|
A | ATGTGTGT others(11): Show |
2 | a0001c0001t0002g0051a0002c0002t0004g0011 | 2 | HG02280.hp2 HG03704.hp1 |
intron_variant | MODIFIER | c.205+67_205+68insTG others(16): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543624 | ||||||
| chrX:49543625
|
C | CGTGTGT | 2 | a0005c0005t0001g0014a0005c0005t0005g0015 | 2 | HG02922.hp2 NA19240.hp2 |
intron_variant | MODIFIER | c.205+75_205+80dupGT others(4): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49543625 | |||||
| chrX:49543625
|
C | CGTGTGTG others(1): Show |
2 | a0002c0002t0001g0050a0005c0005t0003g0017 | 2 | HG02922.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.205+73_205+80dupGT others(6): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49543625 | |||||
| chrX:49543625
|
C | T | 12 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(9): Show | 15 | HG00544.hp2 HG01169.hp2 HG01175.hp2 others(12): Show |
intron_variant | MODIFIER | c.205+68C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543625 | ||||||
| chrX:49543633
|
T | TGTGTGC | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+80_205+81insGC others(4): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49543633 | |||||
| chrX:49543665
|
A | AG | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.205+110dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49543665 | |||||
| chrX:49543685
|
G | C | 1 | a0004c0004t0001g0029 | 1 | NA18939.hp2 | intron_variant | MODIFIER | c.205+128G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543685 | ||||||
| chrX:49543701
|
C | G | 1 | a0005c0005t0005g0015 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.205+144C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543701 | ||||||
| chrX:49543713
|
G | A | 2 | a0006c0006t0002g0019a0006c0006t0002g0045 | 2 | HG03927.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.205+156G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543713 | ||||||
| chrX:49543733
|
C | CT | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.205+178dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49543733 | |||||
| chrX:49543793
|
G | T | 1 | a0001c0001t0002g0057 | 1 | HG01169.hp1 | intron_variant | MODIFIER | c.205+236G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543793 | ||||||
| chrX:49543804
|
A | G | 12 | a0002c0002t0001g0050a0003c0003t0001g0031a0003c0003t0001g0034others(9): Show | 14 | HG00544.hp1 HG01517.hp1 HG02293.hp1 others(11): Show |
intron_variant | MODIFIER | c.205+247A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543804 | ||||||
| chrX:49543851
|
C | T | 12 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(9): Show | 15 | HG00544.hp2 HG01169.hp2 HG01175.hp2 others(12): Show |
intron_variant | MODIFIER | c.205+294C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543851 | ||||||
| chrX:49543859
|
T | C | 17 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(14): Show | 20 | HG00544.hp2 HG00642.hp1 HG01169.hp2 others(17): Show |
intron_variant | MODIFIER | c.205+302T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543859 | ||||||
| chrX:49543884
|
A | G | 13 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(10): Show | 16 | HG00544.hp2 HG00642.hp1 HG01169.hp2 others(13): Show |
intron_variant | MODIFIER | c.205+327A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543884 | ||||||
| chrX:49543893
|
G | T | 17 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(14): Show | 20 | HG00544.hp2 HG00642.hp1 HG01169.hp2 others(17): Show |
intron_variant | MODIFIER | c.205+336G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543893 | ||||||
| chrX:49543913
|
C | G | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+356C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543913 | ||||||
| chrX:49543937
|
G | A | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+380G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49543937 | ||||||
| chrX:49543938
|
CT | C | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+384delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49543938 | |||||
| chrX:49544004
|
C | CA | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.205+452dupA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544004 | |||||
| chrX:49544026
|
TG | T | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.205+471delG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544026 | |||||
| chrX:49544050
|
A | AT | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.205+498dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544050 | |||||
| chrX:49544128
|
C | T | 3 | a0001c0001t0001g0008a0001c0001t0001g0053a0009c0012t0001g0056 | 3 | HG01981.hp1 HG03704.hp2 NA18987.hp1 |
intron_variant | MODIFIER | c.205+571C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544128 | ||||||
| chrX:49544173
|
C | CA | 1 | a0009c0012t0001g0056 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.205+621dupA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544173 | |||||
| chrX:49544195
|
TTAACGTG others(5): Show |
T | 1 | a0001c0001t0002g0009 | 1 | HG01169.hp2 | intron_variant | MODIFIER | c.205+639_205+650del others(12): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544195 | ||||||
| chrX:49544221
|
C | T | 1 | a0003c0003t0001g0040 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.205+664C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544221 | ||||||
| chrX:49544222
|
G | C | 4 | a0003c0003t0001g0035a0004c0004t0001g0003a0004c0004t0001g0029others(1): Show | 6 | HG00544.hp1 HG02293.hp1 HG03710.hp1 others(3): Show |
intron_variant | MODIFIER | c.205+665G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544222 | ||||||
| chrX:49544265
|
A | G | 2 | a0001c0001t0003g0047a0001c0001t0003g0048 | 2 | HG01981.hp2 NA18969.hp1 |
intron_variant | MODIFIER | c.205+708A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544265 | ||||||
| chrX:49544310
|
C | T | 3 | a0001c0001t0002g0024a0001c0001t0002g0025a0006c0006t0002g0018 | 3 | HG01071.hp2 HG01517.hp2 HG01978.hp2 |
intron_variant | MODIFIER | c.205+753C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544310 | ||||||
| chrX:49544325
|
A | G | 3 | a0001c0001t0002g0024a0001c0001t0002g0025a0006c0006t0002g0018 | 3 | HG01071.hp2 HG01517.hp2 HG01978.hp2 |
intron_variant | MODIFIER | c.205+768A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544325 | ||||||
| chrX:49544339
|
G | GC | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.205+785dupC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544339 | |||||
| chrX:49544362
|
G | A | 1 | a0001c0001t0002g0051 | 1 | HG02280.hp2 | intron_variant | MODIFIER | c.205+805G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544362 | ||||||
| chrX:49544423
|
G | A | 2 | a0001c0001t0003g0047a0001c0001t0003g0048 | 2 | HG01981.hp2 NA18969.hp1 |
intron_variant | MODIFIER | c.205+866G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544423 | ||||||
| chrX:49544484
|
C | G | 1 | a0010c0010t0002g0027 | 1 | HG03516.hp2 | intron_variant | MODIFIER | c.205+927C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544484 | ||||||
| chrX:49544499
|
CT | C | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.205+945delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544499 | |||||
| chrX:49544508
|
A | G | 19 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0021others(16): Show | 21 | HG00621.hp1 HG01071.hp2 HG01099.hp1 others(18): Show |
intron_variant | MODIFIER | c.205+951A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544508 | ||||||
| chrX:49544529
|
C | G | 2 | a0006c0006t0002g0019a0006c0006t0002g0045 | 2 | HG03927.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.205+972C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544529 | ||||||
| chrX:49544536
|
A | AT | 2 | a0002c0002t0001g0050a0005c0005t0003g0017 | 2 | HG02922.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.205+982dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544536 | |||||
| chrX:49544538
|
T | TG | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+981_205+982ins others(1): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544538 | ||||||
| chrX:49544540
|
C | T | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+983C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544540 | ||||||
| chrX:49544562
|
G | A | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+1005G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544562 | ||||||
| chrX:49544590
|
G | A | 2 | a0002c0002t0001g0050a0005c0005t0003g0017 | 2 | HG02922.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.205+1033G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544590 | ||||||
| chrX:49544644
|
G | A | 1 | a0002c0002t0001g0050 | 1 | HG02922.hp1 | intron_variant | MODIFIER | c.205+1087G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544644 | ||||||
| chrX:49544666
|
G | A | 3 | a0006c0006t0002g0019a0006c0006t0002g0045a0010c0010t0002g0027 | 3 | HG03516.hp2 HG03927.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.205+1109G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544666 | ||||||
| chrX:49544691
|
T | TC | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.205+1136dupC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544691 | |||||
| chrX:49544848
|
T | C | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+1291T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49544848 | ||||||
| chrX:49544862
|
TA | T | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.205+1308delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544862 | |||||
| chrX:49544867
|
GAATA | G | 1 | a0006c0006t0002g0018 | 1 | HG01517.hp2 | intron_variant | MODIFIER | c.205+1321_205+1324d others(6): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544867 | |||||
| chrX:49544877
|
A | AT | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.205+1321dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544877 | |||||
| chrX:49544878
|
TAAAC | T | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.205+1323_205+1326d others(6): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544878 | |||||
| chrX:49544949
|
G | GT | 1 | a0001c0001t0002g0028 | 1 | NA19003.hp1 | intron_variant | MODIFIER | c.205+1393dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49544949 | |||||
| chrX:49545120
|
G | A | 1 | a0001c0001t0002g0057 | 1 | HG01169.hp1 | intron_variant | MODIFIER | c.206-1260G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545120 | ||||||
| chrX:49545133
|
A | G | 1 | a0001c0001t0003g0047 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.206-1247A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545133 | ||||||
| chrX:49545141
|
C | T | 5 | a0001c0001t0003g0047a0001c0001t0003g0048a0002c0002t0001g0050others(2): Show | 5 | HG01981.hp2 HG02922.hp1 NA18969.hp1 others(2): Show |
intron_variant | MODIFIER | c.206-1239C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545141 | ||||||
| chrX:49545160
|
T | C | 1 | a0005c0005t0001g0014 | 1 | NA19240.hp2 | intron_variant | MODIFIER | c.206-1220T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545160 | ||||||
| chrX:49545180
|
CTGTTCAT others(14): Show |
C | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.206-1195_206-1175d others(23): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545180 | |||||
| chrX:49545189
|
T | TG | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.206-1189dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545189 | |||||
| chrX:49545207
|
G | A | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.206-1173G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545207 | ||||||
| chrX:49545211
|
C | G | 1 | a0001c0001t0002g0057 | 1 | HG01169.hp1 | intron_variant | MODIFIER | c.206-1169C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545211 | ||||||
| chrX:49545223
|
A | C | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.206-1157A>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545223 | ||||||
| chrX:49545238
|
TC | T | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.206-1139delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545238 | |||||
| chrX:49545250
|
T | C | 8 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0024others(5): Show | 9 | HG00621.hp1 HG01071.hp2 HG01099.hp1 others(6): Show |
intron_variant | MODIFIER | c.206-1130T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545250 | ||||||
| chrX:49545254
|
C | G | 6 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(3): Show | 8 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(5): Show |
intron_variant | MODIFIER | c.206-1126C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545254 | ||||||
| chrX:49545270
|
T | TCA | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.206-1087_206-1086d others(4): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545270 | |||||
| chrX:49545270
|
T | TCACA | 1 | a0001c0001t0002g0057 | 1 | HG01169.hp1 | intron_variant | MODIFIER | c.206-1089_206-1086d others(6): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545270 | |||||
| chrX:49545270
|
TCA | T | 6 | a0001c0001t0003g0047a0001c0001t0003g0048a0002c0002t0001g0050others(3): Show | 6 | HG01981.hp2 HG02922.hp1 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.206-1087_206-1086d others(4): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545270 | |||||
| chrX:49545284
|
A | T | 28 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(25): Show | 33 | HG00544.hp2 HG00621.hp1 HG01071.hp2 others(30): Show |
intron_variant | MODIFIER | c.206-1096A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545284 | ||||||
| chrX:49545323
|
G | C | 22 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(19): Show | 25 | HG00621.hp1 HG01071.hp2 HG01099.hp1 others(22): Show |
intron_variant | MODIFIER | c.206-1057G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545323 | ||||||
| chrX:49545323
|
G | T | 6 | a0002c0002t0003g0001a0002c0002t0003g0013a0002c0002t0004g0001others(3): Show | 8 | HG00544.hp2 HG01175.hp2 HG01257.hp2 others(5): Show |
intron_variant | MODIFIER | c.206-1057G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545323 | ||||||
| chrX:49545437
|
A | T | 6 | a0001c0001t0003g0047a0001c0001t0003g0048a0002c0002t0001g0050others(3): Show | 6 | HG01981.hp2 HG02922.hp1 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.206-943A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545437 | ||||||
| chrX:49545439
|
A | G | 6 | a0001c0001t0003g0047a0001c0001t0003g0048a0002c0002t0001g0050others(3): Show | 6 | HG01981.hp2 HG02922.hp1 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.206-941A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545439 | ||||||
| chrX:49545510
|
TC | T | 1 | a0001c0001t0002g0028 | 1 | NA19003.hp1 | intron_variant | MODIFIER | c.206-866delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545510 | |||||
| chrX:49545511
|
C | T | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.206-869C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545511 | ||||||
| chrX:49545532
|
C | CT | 2 | a0001c0001t0002g0009a0001c0001t0002g0028 | 2 | HG01169.hp2 NA19003.hp1 |
intron_variant | MODIFIER | c.206-838dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545532 | |||||
| chrX:49545579
|
G | T | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.206-801G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545579 | ||||||
| chrX:49545584
|
T | G | 8 | a0001c0001t0002g0021a0001c0001t0002g0022a0001c0001t0002g0024others(5): Show | 8 | HG01071.hp2 HG01517.hp2 HG01978.hp2 others(5): Show |
intron_variant | MODIFIER | c.206-796T>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545584 | ||||||
| chrX:49545695
|
GA | G | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.206-683delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49545695 | |||||
| chrX:49545793
|
G | C | 1 | a0005c0005t0005g0015 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.206-587G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545793 | ||||||
| chrX:49545823
|
C | G | 12 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0021others(9): Show | 13 | HG00621.hp1 HG01099.hp1 HG01106.hp1 others(10): Show |
intron_variant | MODIFIER | c.206-557C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545823 | ||||||
| chrX:49545928
|
G | GC | 1 | a0001c0001t0002g0028 | 1 | NA19003.hp1 | intron_variant | MODIFIER | c.206-452_206-451ins others(1): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545928 | ||||||
| chrX:49545958
|
C | T | 3 | a0001c0001t0002g0021a0001c0001t0002g0022a0001c0001t0006g0023 | 3 | NA18969.hp2 NA18973.hp1 NA19003.hp2 |
intron_variant | MODIFIER | c.206-422C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545958 | ||||||
| chrX:49545992
|
T | G | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.206-388T>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49545992 | ||||||
| chrX:49546052
|
T | C | 2 | a0001c0001t0002g0024a0006c0006t0002g0018 | 2 | HG01071.hp2 HG01517.hp2 |
intron_variant | MODIFIER | c.206-328T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546052 | ||||||
| chrX:49546059
|
G | A | 3 | a0002c0002t0001g0050a0005c0005t0001g0014a0005c0005t0005g0015 | 3 | HG02922.hp1 HG02922.hp2 NA19240.hp2 |
intron_variant | MODIFIER | c.206-321G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546059 | ||||||
| chrX:49546080
|
G | A | 6 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0026others(3): Show | 7 | HG00621.hp1 HG01099.hp1 HG01106.hp1 others(4): Show |
intron_variant | MODIFIER | c.206-300G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546080 | ||||||
| chrX:49546098
|
C | T | 1 | a0012c0011t0002g0046 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.206-282C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546098 | ||||||
| chrX:49546179
|
A | G | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.206-201A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546179 | ||||||
| chrX:49546181
|
A | AG | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.206-196dupG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49546181 | |||||
| chrX:49546187
|
T | A | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.206-193T>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546187 | ||||||
| chrX:49546222
|
A | AT | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.206-157dupT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49546222 | |||||
| chrX:49546223
|
T | A | 4 | a0002c0002t0001g0050a0005c0005t0001g0014a0005c0005t0003g0017others(1): Show | 4 | HG02922.hp1 HG02922.hp2 NA19240.hp1 others(1): Show |
intron_variant | MODIFIER | c.206-157T>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546223 | ||||||
| chrX:49546223
|
T | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.206-157T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546223 | ||||||
| chrX:49546268
|
T | G | 10 | a0001c0001t0001g0008a0001c0001t0001g0043a0001c0001t0001g0053others(7): Show | 10 | HG01975.hp1 HG01981.hp1 HG02258.hp1 others(7): Show |
intron_variant | MODIFIER | c.206-112T>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546268 | ||||||
| chrX:49546318
|
T | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.206-62T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546318 | ||||||
| chrX:49546325
|
T | C | 4 | a0002c0002t0001g0050a0005c0005t0001g0014a0005c0005t0003g0017others(1): Show | 4 | HG02922.hp1 HG02922.hp2 NA19240.hp1 others(1): Show |
intron_variant | MODIFIER | c.206-55T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546325 | ||||||
| chrX:49546334
|
C | T | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.206-46C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | 49546334 | ||||||
| chrX:49546371
|
AT | A | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | splice_region_variant&intron_variant | LOW | c.206-4delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49546371 | |||||
| chrX:49546561
|
T | C | 9 | a0001c0001t0002g0052a0001c0001t0002g0057a0002c0002t0003g0001others(6): Show | 11 | HG00544.hp2 HG01169.hp1 HG01175.hp2 others(8): Show |
intron_variant | MODIFIER | c.331+56T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546561 | ||||||
| chrX:49546567
|
T | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+62T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546567 | ||||||
| chrX:49546569
|
G | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+64G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546569 | ||||||
| chrX:49546631
|
T | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+126T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546631 | ||||||
| chrX:49546697
|
C | T | 1 | a0001c0001t0001g0053 | 1 | NA18987.hp1 | intron_variant | MODIFIER | c.331+192C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546697 | ||||||
| chrX:49546700
|
G | GC | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.331+196dupC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49546700 | |||||
| chrX:49546833
|
G | A | 2 | a0002c0002t0001g0050a0005c0005t0005g0015 | 2 | HG02922.hp1 HG02922.hp2 |
intron_variant | MODIFIER | c.331+328G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546833 | ||||||
| chrX:49546854
|
C | T | 1 | a0005c0005t0005g0015 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.331+349C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546854 | ||||||
| chrX:49546857
|
G | GC | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.331+355dupC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49546857 | |||||
| chrX:49546878
|
T | G | 2 | a0003c0003t0001g0036a0003c0003t0001g0037 | 2 | HG01975.hp1 HG02258.hp1 |
intron_variant | MODIFIER | c.331+373T>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546878 | ||||||
| chrX:49546886
|
G | A | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+381G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546886 | ||||||
| chrX:49546905
|
C | G | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+400C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546905 | ||||||
| chrX:49546933
|
G | A | 1 | a0003c0003t0001g0038 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.331+428G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546933 | ||||||
| chrX:49546945
|
C | T | 2 | a0002c0002t0004g0004a0002c0002t0004g0010 | 3 | HG01975.hp2 NA19065.hp2 NA19084.hp2 |
intron_variant | MODIFIER | c.331+440C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546945 | ||||||
| chrX:49546968
|
A | G | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+463A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546968 | ||||||
| chrX:49546984
|
G | A | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+479G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546984 | ||||||
| chrX:49546997
|
C | G | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+492C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49546997 | ||||||
| chrX:49547033
|
G | A | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+528G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547033 | ||||||
| chrX:49547079
|
A | AGG | 1 | a0003c0003t0001g0038 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.331+575_331+576dup others(2): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547079 | |||||
| chrX:49547172
|
C | G | 1 | a0007c0007t0002g0005 | 2 | NA18947.hp2 NA18973.hp2 |
intron_variant | MODIFIER | c.331+667C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547172 | ||||||
| chrX:49547185
|
C | T | 1 | a0007c0007t0002g0005 | 2 | NA18947.hp2 NA18973.hp2 |
intron_variant | MODIFIER | c.331+680C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547185 | ||||||
| chrX:49547187
|
A | T | 2 | a0002c0002t0001g0050a0005c0005t0005g0015 | 2 | HG02922.hp1 HG02922.hp2 |
intron_variant | MODIFIER | c.331+682A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547187 | ||||||
| chrX:49547260
|
T | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.331+755T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547260 | ||||||
| chrX:49547405
|
G | C | 2 | a0006c0006t0002g0019a0006c0006t0002g0045 | 2 | HG03927.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.331+900G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547405 | ||||||
| chrX:49547434
|
C | G | 61 | a0001c0001t0001g0002a0001c0001t0001g0007a0001c0001t0001g0008others(58): Show | 72 | HG00544.hp1 HG00544.hp2 HG00621.hp1 others(69): Show |
intron_variant | MODIFIER | c.331+929C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547434 | ||||||
| chrX:49547485
|
G | A | 30 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(27): Show | 35 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(32): Show |
intron_variant | MODIFIER | c.331+980G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547485 | ||||||
| chrX:49547540
|
C | T | 1 | a0002c0002t0004g0011 | 1 | HG03704.hp1 | intron_variant | MODIFIER | c.331+1035C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547540 | ||||||
| chrX:49547656
|
A | G | 11 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0022others(8): Show | 12 | HG00621.hp1 HG00642.hp1 HG01071.hp2 others(9): Show |
intron_variant | MODIFIER | c.331+1151A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547656 | ||||||
| chrX:49547664
|
G | A | 2 | a0001c0001t0003g0047a0001c0001t0003g0048 | 2 | HG01981.hp2 NA18969.hp1 |
intron_variant | MODIFIER | c.331+1159G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547664 | ||||||
| chrX:49547702
|
AT | A | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.331+1202delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547702 | |||||
| chrX:49547773
|
CT | C | 4 | a0001c0001t0001g0042a0002c0002t0001g0050a0003c0003t0001g0038others(1): Show | 4 | HG02922.hp1 HG02922.hp2 NA19001.hp2 others(1): Show |
intron_variant | MODIFIER | c.332-1199delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547773 | |||||
| chrX:49547782
|
T | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.332-1199T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547782 | ||||||
| chrX:49547784
|
TTTTA | T | 12 | a0001c0001t0001g0007a0001c0001t0001g0043a0001c0001t0001g0053others(9): Show | 12 | HG00544.hp1 HG01175.hp1 HG02922.hp2 others(9): Show |
intron_variant | MODIFIER | c.332-1155_332-1152d others(6): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547784 | |||||
| chrX:49547784
|
TTTTATTT others(1): Show |
T | 6 | a0001c0001t0001g0016a0002c0002t0001g0050a0003c0003t0001g0034others(3): Show | 6 | HG01975.hp1 HG02258.hp1 HG02293.hp2 others(3): Show |
intron_variant | MODIFIER | c.332-1159_332-1152d others(10): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547784 | |||||
| chrX:49547784
|
TTTTATTT others(5): Show |
T | 1 | a0005c0005t0003g0017 | 1 | NA19240.hp1 | intron_variant | MODIFIER | c.332-1163_332-1152d others(14): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547784 | |||||
| chrX:49547795
|
TATTTATT others(28): Show |
T | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.332-1182_332-1148d others(37): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547795 | |||||
| chrX:49547866
|
G | A | 2 | a0001c0001t0003g0047a0001c0001t0003g0048 | 2 | HG01981.hp2 NA18969.hp1 |
intron_variant | MODIFIER | c.332-1115G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547866 | ||||||
| chrX:49547884
|
T | C | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.332-1097T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547884 | ||||||
| chrX:49547902
|
T | A | 14 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(11): Show | 17 | HG00544.hp2 HG01169.hp2 HG01175.hp2 others(14): Show |
intron_variant | MODIFIER | c.332-1079T>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547902 | ||||||
| chrX:49547924
|
C | T | 1 | a0003c0003t0001g0034 | 1 | NA18987.hp2 | intron_variant | MODIFIER | c.332-1057C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547924 | ||||||
| chrX:49547931
|
T | TA | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.332-1049dupA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547931 | |||||
| chrX:49547962
|
TC | T | 1 | a0003c0003t0001g0038 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.332-1013delC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547962 | |||||
| chrX:49547969
|
T | TC | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.332-1006dupC | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49547969 | |||||
| chrX:49547984
|
G | A | 61 | a0001c0001t0001g0002a0001c0001t0001g0007a0001c0001t0001g0008others(58): Show | 72 | HG00544.hp1 HG00544.hp2 HG00621.hp1 others(69): Show |
intron_variant | MODIFIER | c.332-997G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49547984 | ||||||
| chrX:49548005
|
T | A | 10 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0022others(7): Show | 12 | HG00621.hp1 HG01071.hp2 HG01099.hp1 others(9): Show |
intron_variant | MODIFIER | c.332-976T>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548005 | ||||||
| chrX:49548025
|
G | T | 1 | a0007c0007t0002g0005 | 2 | NA18947.hp2 NA18973.hp2 |
intron_variant | MODIFIER | c.332-956G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548025 | ||||||
| chrX:49548087
|
C | T | 3 | a0001c0001t0002g0022a0001c0001t0002g0024a0001c0001t0002g0025 | 3 | HG01071.hp2 HG01978.hp2 NA18969.hp2 |
intron_variant | MODIFIER | c.332-894C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548087 | ||||||
| chrX:49548088
|
A | G | 32 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(29): Show | 37 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(34): Show |
intron_variant | MODIFIER | c.332-893A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548088 | ||||||
| chrX:49548109
|
AT | A | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.332-869delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49548109 | |||||
| chrX:49548133
|
A | G | 1 | a0007c0007t0002g0005 | 2 | NA18947.hp2 NA18973.hp2 |
intron_variant | MODIFIER | c.332-848A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548133 | ||||||
| chrX:49548150
|
A | T | 3 | a0006c0006t0002g0019a0006c0006t0002g0045a0010c0010t0002g0027 | 3 | HG03516.hp2 HG03927.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.332-831A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548150 | ||||||
| chrX:49548153
|
AT | A | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.332-822delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49548153 | |||||
| chrX:49548180
|
G | A | 3 | a0006c0006t0002g0019a0006c0006t0002g0045a0010c0010t0002g0027 | 3 | HG03516.hp2 HG03927.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.332-801G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548180 | ||||||
| chrX:49548192
|
C | T | 1 | a0001c0001t0002g0051 | 1 | HG02280.hp2 | intron_variant | MODIFIER | c.332-789C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548192 | ||||||
| chrX:49548255
|
C | T | 1 | a0002c0002t0003g0013 | 1 | HG00544.hp2 | intron_variant | MODIFIER | c.332-726C>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548255 | ||||||
| chrX:49548288
|
T | C | 13 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0022others(10): Show | 15 | HG00621.hp1 HG01071.hp2 HG01099.hp1 others(12): Show |
intron_variant | MODIFIER | c.332-693T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548288 | ||||||
| chrX:49548377
|
A | T | 37 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(34): Show | 42 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(39): Show |
intron_variant | MODIFIER | c.332-604A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548377 | ||||||
| chrX:49548437
|
G | T | 2 | a0006c0006t0002g0019a0006c0006t0002g0045 | 2 | HG03927.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.332-544G>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548437 | ||||||
| chrX:49548441
|
G | C | 15 | a0001c0001t0002g0009a0001c0001t0002g0051a0001c0001t0002g0052others(12): Show | 18 | HG00544.hp2 HG01169.hp1 HG01169.hp2 others(15): Show |
intron_variant | MODIFIER | c.332-540G>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548441 | ||||||
| chrX:49548567
|
A | G | 15 | a0001c0001t0002g0006a0001c0001t0002g0020a0001c0001t0002g0021others(12): Show | 17 | HG00621.hp1 HG00642.hp1 HG01071.hp2 others(14): Show |
intron_variant | MODIFIER | c.332-414A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548567 | ||||||
| chrX:49548602
|
T | C | 1 | a0005c0005t0003g0017 | 1 | NA19240.hp1 | intron_variant | MODIFIER | c.332-379T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548602 | ||||||
| chrX:49548618
|
C | G | 28 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(25): Show | 32 | HG00544.hp2 HG00621.hp1 HG01071.hp2 others(29): Show |
intron_variant | MODIFIER | c.332-363C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548618 | ||||||
| chrX:49548637
|
A | G | 4 | a0001c0001t0002g0021a0001c0001t0006g0023a0007c0007t0002g0005others(1): Show | 5 | HG00642.hp1 NA18947.hp2 NA18973.hp1 others(2): Show |
intron_variant | MODIFIER | c.332-344A>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548637 | ||||||
| chrX:49548646
|
G | A | 28 | a0001c0001t0002g0006a0001c0001t0002g0009a0001c0001t0002g0020others(25): Show | 32 | HG00544.hp2 HG00621.hp1 HG01071.hp2 others(29): Show |
intron_variant | MODIFIER | c.332-335G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548646 | ||||||
| chrX:49548704
|
G | A | 48 | a0001c0001t0001g0002a0001c0001t0001g0007a0001c0001t0001g0008others(45): Show | 57 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(54): Show |
intron_variant | MODIFIER | c.332-277G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548704 | ||||||
| chrX:49548716
|
CA | C | 1 | a0001c0001t0001g0042 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.332-262delA | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49548716 | |||||
| chrX:49548761
|
G | A | 1 | a0006c0006t0002g0018 | 1 | HG01517.hp2 | intron_variant | MODIFIER | c.332-220G>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548761 | ||||||
| chrX:49548765
|
T | A | 3 | a0001c0001t0002g0026a0001c0001t0002g0049a0010c0010t0002g0027 | 3 | HG01099.hp1 HG01106.hp1 HG03516.hp2 |
intron_variant | MODIFIER | c.332-216T>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548765 | ||||||
| chrX:49548774
|
AG | A | 1 | a0001c0001t0002g0058 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.332-204delG | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49548774 | |||||
| chrX:49548794
|
AT | A | 1 | a0003c0003t0001g0038 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.332-185delT | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49548794 | |||||
| chrX:49548819
|
A | T | 43 | a0001c0001t0001g0002a0001c0001t0001g0007a0001c0001t0001g0016others(40): Show | 52 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(49): Show |
intron_variant | MODIFIER | c.332-162A>T | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548819 | ||||||
| chrX:49548855
|
T | A | 44 | a0001c0001t0001g0002a0001c0001t0001g0007a0001c0001t0001g0016others(41): Show | 53 | HG00544.hp2 HG00621.hp1 HG00642.hp1 others(50): Show |
intron_variant | MODIFIER | c.332-126T>A | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548855 | ||||||
| chrX:49548897
|
C | G | 1 | a0003c0003t0001g0037 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.332-84C>G | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548897 | ||||||
| chrX:49548925
|
T | C | 3 | a0001c0001t0002g0009a0002c0002t0004g0012a0011c0009t0002g0055 | 3 | HG01169.hp2 HG03831.hp1 NA19090.hp2 |
intron_variant | MODIFIER | c.332-56T>C | GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4/4 | chrX | 49548925 |