Joint Open Genome and Omics Platform (JoGo)

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geneid	23708
ensemblid	ENSG00000189369.9
hgncid	4622
symbol	GSPT2
name	G1 to S phase transition 2
refseq_nuc	NM_018094.5
refseq_prot	NP_060564.2
ensembl_nuc	ENST00000340438.6
ensembl_prot	ENSP00000341247.4
mane_status	MANE Select
chr	chrX
start	51743442
end	51746232
strand	+
ver	v1.2
region	chrX:51743442-51746232
region5000	chrX:51738442-51751232
regionname0	GSPT2_chrX_51743442_51746232
regionname5000	GSPT2_chrX_51738442_51751232

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	628	305	72	44	146	11	30	115	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0002	0/0	628	5	5	0	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0003	0/0	50	1	0	0	1	0	0	1	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0004	0/0	627	1	0	0	1	0	0	1	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1887	296	67	43	143	11	30	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0002	0/0	1887	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0003	0/0	1887	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0004	0/0	1887	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0005	0/0	1887	1	0	1	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0006	0/0	1884	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0007	0/0	1887	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0008	0/0	1888	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
c0009	0/0	1887	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	905	243	49	30	130	9	25	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
t0002	1/1	905	64	27	14	14	2	5	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
t0003	0/0	906	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
t0004	0/0	908	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
t0005	0/0	905	1	1	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
t0006	0/0	903	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
t0007	0/0	905	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0000	1/1	312	77	44	148	11	30	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1887	296	67	43	143	11	30	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0002	0/0	1887	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0004	0/0	1887	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0005	0/0	1887	1	0	1	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0007	0/0	1887	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0009	0/0	1887	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0002c0003	0/0	1887	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0003c0008	0/0	1888	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0004c0006	0/0	1884	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	2791	230	39	30	127	9	25	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0001t0002	1/1	2791	63	27	13	14	2	5	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0001t0005	0/0	2791	1	1	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0001t0006	0/0	2789	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0001t0007	0/0	2791	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0002t0001	0/0	2791	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0004t0001	0/0	2791	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0005t0002	0/0	2791	1	0	1	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0007t0001	0/0	2791	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0001c0009t0001	0/0	2791	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0002c0003t0001	0/0	2791	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0003c0008t0004	0/0	2795	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232
a0004c0006t0003	0/0	2789	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	copy fasta	chrX	51738442	51751232

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0000	0/0	230	39	30	127	9	25	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0001t0002g0000	1/1	63	27	13	14	2	5	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0001t0005g0000	0/0	1	1	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0001t0006g0000	0/0	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0001t0007g0000	0/0	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0002t0001g0000	0/0	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0004t0001g0000	0/0	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0005t0002g0000	0/0	1	0	1	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0007t0001g0000	0/0	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0001c0009t0001g0000	0/0	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0002c0003t0001g0000	0/0	5	5	0	0	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0003c0008t0004g0000	0/0	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
a0004c0006t0003g0000	0/0	1	0	0	1	0	0	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0000	EUR	GBR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00099	hp2	a0001	c0001	t0001	g0000	EUR	GBR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00140	hp1	a0001	c0001	t0001	g0000	EUR	GBR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00280	hp1	a0001	c0001	t0001	g0000	EUR	FIN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00323	hp1	a0001	c0001	t0001	g0000	EUR	FIN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00323	hp2	a0001	c0001	t0001	g0000	EUR	FIN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00423	hp1	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00423	hp2	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00438	hp1	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00438	hp2	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00558	hp1	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00558	hp2	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00597	hp1	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00597	hp2	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00609	hp1	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00621	hp1	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00639	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00639	hp2	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00642	hp1	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00673	hp1	a0001	c0001	t0001	g0000	EAS	CHS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00735	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00735	hp2	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00738	hp1	a0001	c0005	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00741	hp1	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG00741	hp2	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01069	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01070	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01070	hp2	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01074	hp1	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01081	hp1	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01081	hp2	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01099	hp1	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01106	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01109	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01167	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01175	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01175	hp2	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01192	hp1	a0001	c0001	t0002	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01243	hp1	a0001	c0001	t0001	g0000	AMR	PUR	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01255	hp1	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01256	hp1	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01258	hp1	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01261	hp1	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01346	hp1	a0001	c0001	t0002	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01346	hp2	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01358	hp1	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01361	hp1	a0001	c0001	t0002	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01361	hp2	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01433	hp1	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01496	hp1	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01496	hp2	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01515	hp1	a0001	c0001	t0001	g0000	EUR	IBS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01516	hp1	a0001	c0001	t0001	g0000	EUR	IBS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01516	hp2	a0001	c0001	t0002	g0000	EUR	IBS	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01884	hp1	a0001	c0001	t0002	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01884	hp2	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01891	hp1	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01891	hp2	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01928	hp1	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01934	hp1	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01943	hp1	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01952	hp1	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01978	hp1	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01978	hp2	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01981	hp1	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01981	hp2	a0001	c0001	t0001	g0000	AMR	PEL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02015	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02027	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02040	hp1	a0001	c0009	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02055	hp1	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02056	hp1	a0001	c0001	t0002	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02071	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02074	hp1	a0001	c0001	t0002	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02080	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02080	hp2	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02083	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02129	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02132	hp1	a0001	c0001	t0002	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02135	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02145	hp1	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02155	hp1	a0001	c0001	t0001	g0000	EAS	CDX	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02155	hp2	a0001	c0001	t0001	g0000	EAS	CDX	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02165	hp1	a0001	c0001	t0001	g0000	EAS	CDX	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02165	hp2	a0001	c0001	t0001	g0000	EAS	CDX	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02257	hp1	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02257	hp2	a0001	c0002	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02258	hp1	a0001	c0001	t0002	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02280	hp1	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02280	hp2	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02451	hp1	a0001	c0002	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02451	hp2	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02523	hp1	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02523	hp2	a0001	c0001	t0001	g0000	EAS	KHV	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02572	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02602	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02622	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02622	hp2	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02630	hp1	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02630	hp2	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02683	hp1	a0001	c0001	t0002	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02683	hp2	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02698	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02717	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02723	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02723	hp2	a0002	c0003	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02735	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02738	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02809	hp1	a0001	c0002	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02809	hp2	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02818	hp1	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02818	hp2	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02886	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02886	hp2	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02895	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02896	hp1	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02896	hp2	a0002	c0003	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02897	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02897	hp2	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02922	hp1	a0001	c0001	t0002	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02922	hp2	a0001	c0001	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02965	hp1	a0001	c0001	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02970	hp1	a0001	c0001	t0002	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02970	hp2	a0001	c0001	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02976	hp1	a0001	c0001	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02976	hp2	a0001	c0001	t0002	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03017	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03041	hp1	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03041	hp2	a0001	c0001	t0002	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03098	hp1	a0001	c0001	t0002	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03130	hp1	a0001	c0001	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03139	hp1	a0001	c0001	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03195	hp1	a0001	c0001	t0002	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03195	hp2	a0002	c0003	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03209	hp1	a0001	c0001	t0001	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03225	hp1	a0001	c0001	t0001	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03239	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03239	hp2	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03453	hp1	a0001	c0001	t0002	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03453	hp2	a0001	c0001	t0001	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03486	hp1	a0001	c0001	t0001	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03486	hp2	a0001	c0001	t0001	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03490	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03491	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03491	hp2	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03492	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03516	hp1	a0001	c0001	t0002	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03516	hp2	a0002	c0003	t0001	g0000	AFR	ESN	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03540	hp1	a0002	c0003	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03540	hp2	a0001	c0001	t0001	g0000	AFR	GWD	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03579	hp1	a0001	c0001	t0002	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03654	hp1	a0001	c0001	t0002	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03669	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03669	hp2	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03688	hp1	a0001	c0001	t0001	g0000	SAS	STU	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03704	hp1	a0001	c0001	t0002	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03704	hp2	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03710	hp1	a0001	c0001	t0001	g0000	SAS	PJL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03831	hp1	a0001	c0001	t0002	g0000	SAS	BEB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03831	hp2	a0001	c0001	t0001	g0000	SAS	BEB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03942	hp1	a0001	c0001	t0001	g0000	SAS	BEB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG04115	hp1	a0001	c0001	t0001	g0000	SAS	STU	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG04184	hp1	a0001	c0001	t0001	g0000	SAS	BEB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG04184	hp2	a0001	c0001	t0001	g0000	SAS	BEB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG04199	hp1	a0001	c0001	t0001	g0000	SAS	STU	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG04204	hp1	a0001	c0001	t0001	g0000	SAS	STU	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG04228	hp1	a0001	c0001	t0002	g0000	SAS	STU	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18522	hp1	a0001	c0001	t0002	g0000	AFR	YRI	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18612	hp1	a0001	c0001	t0001	g0000	EAS	CHB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18747	hp1	a0001	c0001	t0001	g0000	EAS	CHB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18906	hp1	a0001	c0001	t0001	g0000	AFR	YRI	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18906	hp2	a0001	c0001	t0001	g0000	AFR	YRI	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18939	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18939	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18940	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18941	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18941	hp2	a0001	c0001	t0006	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18942	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18942	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18943	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18944	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18945	hp1	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18946	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18946	hp2	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18947	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18947	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18948	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18950	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18950	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18951	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18951	hp2	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18952	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18953	hp1	a0004	c0006	t0003	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18954	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18954	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18957	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18957	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18959	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18960	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18961	hp1	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18962	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18963	hp1	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18963	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18965	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18966	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18967	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18968	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18968	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18969	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18969	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18970	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18971	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18972	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18972	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18973	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18973	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18974	hp1	a0003	c0008	t0004	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18975	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18975	hp2	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18977	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18978	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18978	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18979	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18979	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18980	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18980	hp2	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18981	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18981	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18982	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18984	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18986	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18987	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18987	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18988	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18989	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18990	hp1	a0001	c0001	t0007	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18991	hp1	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18991	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18994	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18995	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19000	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19002	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19002	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19004	hp1	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19005	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19006	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19007	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19009	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19011	hp1	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19011	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19012	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19030	hp1	a0001	c0001	t0001	g0000	AFR	LWK	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19030	hp2	a0001	c0001	t0002	g0000	AFR	LWK	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19043	hp1	a0001	c0001	t0002	g0000	AFR	LWK	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19055	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19056	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19058	hp1	a0001	c0001	t0002	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19060	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19062	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19063	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19064	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19064	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19065	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19065	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19066	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19067	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19068	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19070	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19072	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19074	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19074	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19075	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19076	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19077	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19077	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19078	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19078	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19079	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19081	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19081	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19082	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19083	hp1	a0001	c0004	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19084	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19084	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19085	hp1	a0001	c0007	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19086	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19088	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19089	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19090	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19090	hp2	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19091	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19240	hp1	a0001	c0001	t0001	g0000	AFR	YRI	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA19240	hp2	a0001	c0002	t0001	g0000	AFR	YRI	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA20129	hp1	a0001	c0001	t0005	g0000	AFR	ASW	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA20129	hp2	a0001	c0001	t0002	g0000	AFR	ASW	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA20752	hp1	a0001	c0001	t0001	g0000	EUR	TSI	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA20805	hp1	a0001	c0001	t0002	g0000	EUR	TSI	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA20905	hp1	a0001	c0001	t0001	g0000	SAS	GIH	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01123	hp1	a0001	c0001	t0002	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG01123	hp2	a0001	c0001	t0001	g0000	AMR	CLM	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02109	hp1	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02109	hp2	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02486	hp1	a0001	c0001	t0002	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02559	hp1	a0001	c0001	t0001	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG02559	hp2	a0001	c0001	t0002	g0000	AFR	ACB	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG03471	hp1	a0001	c0001	t0002	g0000	AFR	MSL	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG06807	hp1	a0001	c0001	t0001	g0000	AFR	USA	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
HG06807	hp2	a0001	c0002	t0001	g0000	AFR	USA	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA18955	hp1	a0001	c0001	t0001	g0000	EAS	JPT	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA21309	hp1	a0001	c0001	t0002	g0000	AFR	LWK	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
NA21309	hp2	a0001	c0001	t0001	g0000	AFR	LWK	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
homoSapiens_chm13v2	hp1	a0001	c0001	t0002	g0000	REF	REF	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232
homoSapiens_grch38	hp1	a0001	c0001	t0002	g0000	REF	REF	GSPT2_chrX_51738442_51751232	GSPT2	chrX	51738442	51751232

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:51743694	C C	T T	1	a0002 a0002	5	HG02723.hp2 HG02896.hp2 HG03195.hp2 others(2): Show HG02723.hp2 HG02896.hp2 HG03195.hp2 HG03516.hp2 HG03540.hp1	missense_variant	MODERATE	c.68C>T c.68C>T	p.Pro23Leu p.Pro23Leu	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	253/2791	68/1887	23/628		chrX	51743694
chrX:51743716	T T	TG TG	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.92dupG c.92dupG	p.Val32fs p.Val32fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	278/2791	93/1887	31/628	INFO_REALIGN_3_PRIME	chrX	51743716
chrX:51743984	TCGCTTGA others(7): Show TCGCTTGAAGGTTCC	T T	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.359_372delCGCTTGAA others(6): Show c.359_372delCGCTTGAAGGTTCC	p.Ser120fs p.Ser120fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	544/2791	359/1887	120/628		chrX	51743984
chrX:51744026	GA GA	G G	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.402delA c.402delA	p.Glu134fs p.Glu134fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	587/2791	402/1887	134/628	INFO_REALIGN_3_PRIME	chrX	51744026
chrX:51744168	A A	AG AG	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.544dupG c.544dupG	p.Glu182fs p.Glu182fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	730/2791	545/1887	182/628	INFO_REALIGN_3_PRIME	chrX	51744168
chrX:51744170	GAAA GAAA	G G	1	a0004 a0004	1	NA18953.hp1 NA18953.hp1	conservative_inframe_deletion	MODERATE	c.547_549delAAA c.547_549delAAA	p.Lys183del p.Lys183del	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	732/2791	547/1887	183/628	INFO_REALIGN_3_PRIME	chrX	51744170
chrX:51744186	GA GA	G G	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.564delA c.564delA	p.Lys188fs p.Lys188fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	749/2791	564/1887	188/628	INFO_REALIGN_3_PRIME	chrX	51744186
chrX:51744207	T T	TAATACAA others(7): Show TAATACAAGTAAACA	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.582_583insATACAAGT others(6): Show c.582_583insATACAAGTAAACAA	p.Pro195fs p.Pro195fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	768/2791	583/1887	195/628	INFO_REALIGN_3_PRIME	chrX	51744207
chrX:51744209	C C	A A	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	missense_variant	MODERATE	c.583C>A c.583C>A	p.Pro195Thr p.Pro195Thr	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	768/2791	583/1887	195/628		chrX	51744209
chrX:51744424	T T	TA TA	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.802dupA c.802dupA	p.Thr268fs p.Thr268fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	988/2791	803/1887	268/628	INFO_REALIGN_3_PRIME	chrX	51744424
chrX:51744521	A A	AT AT	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.897dupT c.897dupT	p.Gly300fs p.Gly300fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	1083/2791	898/1887	300/628	INFO_REALIGN_3_PRIME	chrX	51744521
chrX:51745312	CA CA	C C	1	a0003 a0003	1	NA18974.hp1 NA18974.hp1	frameshift_variant	HIGH	c.1692delA c.1692delA	p.Lys564fs p.Lys564fs	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	1877/2791	1692/1887	564/628	INFO_REALIGN_3_PRIME	chrX	51745312

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:51743656	G G	A A	1	a0001c0004 a0001c0004	1	NA19083.hp1 NA19083.hp1	synonymous_variant	LOW	c.30G>A c.30G>A	p.Ser10Ser p.Ser10Ser	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	215/2791	30/1887	10/628	chrX	51743656
chrX:51743710	C C	T T	1	a0001c0009 a0001c0009	1	HG02040.hp1 HG02040.hp1	synonymous_variant	LOW	c.84C>T c.84C>T	p.Ser28Ser p.Ser28Ser	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	269/2791	84/1887	28/628	chrX	51743710
chrX:51743725	C C	T T	1	a0001c0007 a0001c0007	1	NA19085.hp1 NA19085.hp1	synonymous_variant	LOW	c.99C>T c.99C>T	p.Ser33Ser p.Ser33Ser	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	284/2791	99/1887	33/628	chrX	51743725
chrX:51744049	G G	A A	1	a0001c0002 a0001c0002	5	HG02257.hp2 HG02451.hp1 HG02809.hp1 others(2): Show HG02257.hp2 HG02451.hp1 HG02809.hp1 HG06807.hp2 NA19240.hp2	synonymous_variant	LOW	c.423G>A c.423G>A	p.Glu141Glu p.Glu141Glu	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	608/2791	423/1887	141/628	chrX	51744049
chrX:51744545	T T	C C	1	a0001c0005 a0001c0005	1	HG00738.hp1 HG00738.hp1	synonymous_variant	LOW	c.919T>C c.919T>C	p.Leu307Leu p.Leu307Leu	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	1104/2791	919/1887	307/628	chrX	51744545

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:51743523	A A	AC AC	1	a0004c0006t0003 a0004c0006t0003	1	NA18953.hp1 NA18953.hp1	5_prime_UTR_variant	MODIFIER	c.-100dupC c.-100dupC	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	99	INFO_REALIGN_3_PRIME	chrX	51743523
chrX:51743563	C C	T T	9	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(6): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 a0001c0004t0001 a0001c0007t0001 a0001c0009t0001 a0002c0003t0001 a0004c0006t0003	246	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(243): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG01069.hp1 HG01070.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01175.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02622.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19055.hp1 NA19056.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp2	5_prime_UTR_variant	MODIFIER	c.-64C>T c.-64C>T	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	64		chrX	51743563
chrX:51745717	C C	G G	1	a0001c0001t0005 a0001c0001t0005	1	NA20129.hp1 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.204C>G c.204C>G	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	204		chrX	51745717
chrX:51745833	A A	T T	1	a0001c0001t0007 a0001c0001t0007	1	NA18990.hp1 NA18990.hp1	3_prime_UTR_variant	MODIFIER	c.320A>T c.320A>T	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	320		chrX	51745833
chrX:51745875	G G	GT GT	1	a0003c0008t0004 a0003c0008t0004	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.365dupT c.365dupT	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	366	INFO_REALIGN_3_PRIME	chrX	51745875
chrX:51745880	T T	TC TC	1	a0003c0008t0004 a0003c0008t0004	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.367_368insC c.367_368insC	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	368		chrX	51745880
chrX:51745904	CAT CAT	C C	1	a0001c0001t0006 a0001c0001t0006	1	NA18941.hp2 NA18941.hp2	3_prime_UTR_variant	MODIFIER	c.392_393delAT c.392_393delAT	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	392		chrX	51745904
chrX:51746105	T T	TA TA	1	a0003c0008t0004 a0003c0008t0004	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.593dupA c.593dupA	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	594	INFO_REALIGN_3_PRIME	chrX	51746105
chrX:51746124	AT AT	A A	1	a0003c0008t0004 a0003c0008t0004	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.615delT c.615delT	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	615	INFO_REALIGN_3_PRIME	chrX	51746124
chrX:51746131	G G	GA GA	1	a0003c0008t0004 a0003c0008t0004	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.625dupA c.625dupA	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	626	INFO_REALIGN_3_PRIME	chrX	51746131
chrX:51746144	G G	GT GT	1	a0003c0008t0004 a0003c0008t0004	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.633dupT c.633dupT	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	634	INFO_REALIGN_3_PRIME	chrX	51746144
chrX:51746155	TC TC	T T	1	a0003c0008t0004 a0003c0008t0004	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.645delC c.645delC	GSPT2	ENSG00000189369.9	transcript	ENST00000340438.6	protein_coding	1/1	645	INFO_REALIGN_3_PRIME	chrX	51746155

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

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Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 4)

CCoding Level Haplotype Info (Total: 9)

TTranscript Level Haplotype Info (Total: 7)

GGenebody Level Haplotype Info (Total: 1)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 9)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 13)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 13)

Haplotype Details by Sample (Haploid Level) (Total: 312)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 12)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (Exon) (Total: 12)

GGenebody Level Haplotype Variants (Intron) (Total: 0)

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Annotation (Repeats)

Annotation (SNP Array)