Joint Open Genome and Omics Platform (JoGo)

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geneid	139728
ensemblid	ENSG00000130822.16
hgncid	13415
symbol	PNCK
name	pregnancy up-regulated nonubiquitous CaM kinase
refseq_nuc	NM_001366977.1
refseq_prot	NP_001353906.1
ensembl_nuc	ENST00000340888.8
ensembl_prot	ENSP00000340586.4
mane_status	MANE Select
chr	chrX
start	153669733
end	153673813
strand	-
ver	v1.2
region	chrX:153669733-153673813
region5000	chrX:153664733-153678813
regionname0	PNCK_chrX_153669733_153673813
regionname5000	PNCK_chrX_153664733_153678813

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	343	273	75	45	115	11	25	84	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0002	0/0	218	2	1	0	0	0	1	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0003	0/0	343	1	0	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1032	272	75	45	114	11	25	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
c0002	0/0	1033	2	1	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
c0003	0/0	1032	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
c0004	0/0	1032	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	442	222	40	44	100	11	25	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0002	0/0	443	21	7	0	13	0	1	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0003	0/0	442	18	16	2	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0004	0/0	442	5	5	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0005	0/0	442	4	4	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0006	0/0	442	2	0	0	2	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0007	0/0	442	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0008	0/0	442	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0009	0/0	441	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
t0010	0/0	442	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	133	8	32	74	5	13	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0002	0/0	13	6	4	1	1	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0003	0/0	12	12	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0004	0/0	9	3	1	4	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0005	0/0	8	1	0	6	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0006	0/0	8	0	0	8	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0007	0/0	8	0	1	0	3	4	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0008	0/0	5	0	0	5	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0009	1/0	5	2	0	1	1	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0010	0/0	5	1	0	3	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0011	0/0	4	4	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0012	0/0	4	4	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0013	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0014	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0015	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0016	0/0	2	0	0	2	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0017	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0018	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0019	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0020	0/0	2	0	0	0	0	2	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0021	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0022	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0023	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0024	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0025	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0026	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0027	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0028	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0029	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0030	0/0	1	0	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0031	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0032	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0033	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0034	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0035	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0036	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0037	0/0	1	0	0	0	1	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0038	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0039	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0040	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0041	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0042	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0043	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0044	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0045	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0046	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0047	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0048	0/0	1	0	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0049	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0050	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0051	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0052	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0053	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0054	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0055	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0056	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0057	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0058	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0059	0/0	1	0	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0060	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0061	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0062	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0063	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0064	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0065	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
g0066	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1032	272	75	45	114	11	25	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0003	0/0	1032	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0002c0002	0/0	1033	2	1	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0003c0004	0/0	1032	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1473	219	39	44	99	11	24	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0002	0/0	1474	21	7	0	13	0	1	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0003	0/0	1473	17	16	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0004	0/0	1473	5	5	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0005	0/0	1473	4	4	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0006	0/0	1473	2	0	0	2	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0007	0/0	1473	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0008	0/0	1473	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0009	0/0	1472	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0001t0010	0/0	1473	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0001c0003t0001	0/0	1473	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0002c0002t0001	0/0	1474	2	1	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813
a0003c0004t0003	0/0	1473	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	copy fasta	chrX	153664733	153678813

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	133	8	32	74	5	13	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0002	0/0	13	6	4	1	1	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0004	0/0	9	3	1	4	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0005	0/0	8	1	0	6	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0007	0/0	8	0	1	0	3	4	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0008	0/0	5	0	0	5	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0009	1/0	5	2	0	1	1	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0013	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0014	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0017	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0020	0/0	2	0	0	0	0	2	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0021	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0023	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0025	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0026	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0027	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0028	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0030	0/0	1	0	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0032	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0034	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0037	0/0	1	0	0	0	1	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0038	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0039	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0047	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0048	0/0	1	0	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0050	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0051	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0054	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0055	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0057	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0058	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0060	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0061	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0062	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0063	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0064	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0001g0066	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0006	0/0	8	0	0	8	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0010	0/0	5	1	0	3	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0018	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0019	0/0	2	2	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0022	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0043	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0046	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0002g0056	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0003g0003	0/0	12	12	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0003g0029	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0003g0033	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0003g0042	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0003g0049	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0003g0052	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0004g0011	0/0	4	4	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0004g0024	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0005g0012	0/0	4	4	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0006g0016	0/0	2	0	0	2	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0007g0065	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0008g0031	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0009g0036	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0001t0010g0035	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0001c0003t0001g0040	0/0	1	0	0	1	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0002c0002t0001g0041	0/0	1	1	0	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0002c0002t0001g0059	0/0	1	0	0	0	0	1	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
a0003c0004t0003g0045	0/0	1	0	1	0	0	0	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00140	hp1	a0001	c0001	t0001	g0009	EUR	GBR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00408	hp1	a0001	c0001	t0001	g0002	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00408	hp2	a0001	c0001	t0001	g0008	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00438	hp1	a0001	c0001	t0002	g0010	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00438	hp2	a0001	c0001	t0002	g0010	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00544	hp1	a0001	c0001	t0001	g0026	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00544	hp2	a0001	c0001	t0002	g0006	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00609	hp1	a0001	c0001	t0001	g0005	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00741	hp1	a0001	c0001	t0001	g0064	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG00741	hp2	a0001	c0001	t0001	g0007	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01069	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01071	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01071	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01074	hp1	a0001	c0001	t0001	g0062	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01106	hp1	a0001	c0001	t0001	g0063	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01109	hp1	a0001	c0001	t0003	g0042	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01175	hp1	a0001	c0001	t0001	g0004	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01192	hp1	a0001	c0001	t0001	g0023	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01243	hp1	a0001	c0001	t0001	g0027	AMR	PUR	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01496	hp1	a0001	c0001	t0001	g0002	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01515	hp1	a0001	c0001	t0001	g0037	EUR	IBS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01516	hp1	a0001	c0001	t0001	g0007	EUR	IBS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01517	hp2	a0001	c0001	t0001	g0007	EUR	IBS	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01884	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01884	hp2	a0001	c0001	t0001	g0034	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01891	hp1	a0001	c0001	t0001	g0017	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01891	hp2	a0001	c0001	t0001	g0013	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01934	hp1	a0003	c0004	t0003	g0045	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02055	hp1	a0002	c0002	t0001	g0041	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02080	hp1	a0001	c0003	t0001	g0040	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02145	hp1	a0001	c0001	t0002	g0010	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02257	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02257	hp2	a0001	c0001	t0003	g0003	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02258	hp1	a0001	c0001	t0002	g0019	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02273	hp1	a0001	c0001	t0001	g0032	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02280	hp1	a0001	c0001	t0005	g0012	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02280	hp2	a0001	c0001	t0001	g0025	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02451	hp1	a0001	c0001	t0003	g0003	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02451	hp2	a0001	c0001	t0001	g0055	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02572	hp1	a0001	c0001	t0004	g0011	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02615	hp1	a0001	c0001	t0007	g0065	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02615	hp2	a0001	c0001	t0001	g0002	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02622	hp1	a0001	c0001	t0001	g0017	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02622	hp2	a0001	c0001	t0004	g0011	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02630	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02630	hp2	a0001	c0001	t0009	g0036	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02647	hp1	a0001	c0001	t0004	g0024	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02683	hp1	a0001	c0001	t0001	g0030	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02683	hp2	a0001	c0001	t0001	g0007	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02723	hp1	a0001	c0001	t0003	g0003	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02738	hp1	a0001	c0001	t0001	g0007	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02809	hp1	a0001	c0001	t0003	g0003	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02809	hp2	a0001	c0001	t0001	g0021	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02818	hp1	a0001	c0001	t0004	g0011	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02818	hp2	a0001	c0001	t0008	g0031	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02886	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02886	hp2	a0001	c0001	t0003	g0033	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02895	hp1	a0001	c0001	t0001	g0014	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02896	hp1	a0001	c0001	t0003	g0003	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02896	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02897	hp1	a0001	c0001	t0003	g0003	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02897	hp2	a0001	c0001	t0001	g0014	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02970	hp1	a0001	c0001	t0003	g0003	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02970	hp2	a0001	c0001	t0001	g0009	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02976	hp1	a0001	c0001	t0010	g0035	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02976	hp2	a0001	c0001	t0001	g0015	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03017	hp1	a0001	c0001	t0001	g0005	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03041	hp2	a0001	c0001	t0003	g0003	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03098	hp1	a0001	c0001	t0001	g0015	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03130	hp1	a0001	c0001	t0004	g0011	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03139	hp1	a0001	c0001	t0003	g0003	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03195	hp1	a0001	c0001	t0001	g0061	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03195	hp2	a0001	c0001	t0003	g0003	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03209	hp1	a0001	c0001	t0002	g0018	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03225	hp1	a0001	c0001	t0001	g0028	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03239	hp2	a0001	c0001	t0001	g0048	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03453	hp1	a0001	c0001	t0003	g0049	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03453	hp2	a0001	c0001	t0001	g0002	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03486	hp1	a0001	c0001	t0001	g0057	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03490	hp1	a0001	c0001	t0001	g0007	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03491	hp2	a0001	c0001	t0001	g0020	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03492	hp1	a0001	c0001	t0001	g0020	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03516	hp1	a0001	c0001	t0002	g0022	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03516	hp2	a0001	c0001	t0003	g0003	AFR	ESN	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03540	hp2	a0001	c0001	t0001	g0004	AFR	GWD	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03579	hp1	a0001	c0001	t0003	g0003	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03688	hp1	a0001	c0001	t0002	g0010	SAS	STU	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03834	hp1	a0001	c0001	t0001	g0004	SAS	BEB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03834	hp2	a0001	c0001	t0001	g0002	SAS	BEB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03942	hp1	a0001	c0001	t0001	g0007	SAS	BEB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG04115	hp1	a0002	c0002	t0001	g0059	SAS	STU	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18522	hp1	a0001	c0001	t0002	g0018	AFR	YRI	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18906	hp1	a0001	c0001	t0001	g0002	AFR	YRI	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18906	hp2	a0001	c0001	t0001	g0002	AFR	YRI	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18943	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18945	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18947	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18969	hp1	a0001	c0001	t0001	g0008	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18969	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18973	hp1	a0001	c0001	t0001	g0008	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18973	hp2	a0001	c0001	t0002	g0043	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18974	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18979	hp1	a0001	c0001	t0001	g0004	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18979	hp2	a0001	c0001	t0001	g0004	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18985	hp1	a0001	c0001	t0001	g0038	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18989	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18990	hp1	a0001	c0001	t0006	g0016	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18991	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18997	hp1	a0001	c0001	t0001	g0066	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18997	hp2	a0001	c0001	t0002	g0056	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18999	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19005	hp1	a0001	c0001	t0002	g0010	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19010	hp2	a0001	c0001	t0001	g0044	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19011	hp2	a0001	c0001	t0001	g0047	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19012	hp1	a0001	c0001	t0006	g0016	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19030	hp1	a0001	c0001	t0001	g0013	AFR	LWK	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19030	hp2	a0001	c0001	t0005	g0012	AFR	LWK	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19043	hp1	a0001	c0001	t0005	g0012	AFR	LWK	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19058	hp1	a0001	c0001	t0001	g0008	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19063	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19067	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19068	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19077	hp1	a0001	c0001	t0001	g0053	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19078	hp2	a0001	c0001	t0001	g0058	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19081	hp1	a0001	c0001	t0001	g0060	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19081	hp2	a0001	c0001	t0002	g0006	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19084	hp2	a0001	c0001	t0001	g0004	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19085	hp1	a0001	c0001	t0001	g0004	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19086	hp1	a0001	c0001	t0001	g0008	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19089	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19090	hp1	a0001	c0001	t0002	g0006	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA20129	hp1	a0001	c0001	t0001	g0009	AFR	ASW	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA20129	hp2	a0001	c0001	t0005	g0012	AFR	ASW	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA20805	hp1	a0001	c0001	t0001	g0007	EUR	TSI	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02109	hp1	a0001	c0001	t0003	g0052	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02109	hp2	a0001	c0001	t0002	g0019	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02486	hp1	a0001	c0001	t0001	g0054	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02559	hp1	a0001	c0001	t0001	g0039	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG03471	hp1	a0001	c0001	t0001	g0050	AFR	MSL	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG06807	hp1	a0001	c0001	t0003	g0029	AFR	USA	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
HG06807	hp2	a0001	c0001	t0002	g0046	AFR	USA	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA20300	hp1	a0001	c0001	t0001	g0005	AFR	USA	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
NA20300	hp2	a0001	c0001	t0001	g0051	AFR	USA	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0009	REF	REF	PNCK_chrX_153664733_153678813	PNCK	chrX	153664733	153678813

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:153670483	G G	A A	1	a0003 a0003	1	HG01934.hp1 HG01934.hp1	missense_variant	MODERATE	c.1006C>T c.1006C>T	p.Arg336Cys p.Arg336Cys	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	11/12	1042/1473	1006/1032	336/343			chrX	153670483
chrX:153671171	A A	AG AG	1	a0002 a0002	2	HG02055.hp1 HG04115.hp1 HG02055.hp1 HG04115.hp1	frameshift_variant	HIGH	c.633dupC c.633dupC	p.Phe212fs p.Phe212fs	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	8/12	669/1473	633/1032	211/343			chrX	153671171

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:153671187	C C	T T	1	a0001c0003 a0001c0003	1	HG02080.hp1 HG02080.hp1	synonymous_variant	LOW	c.618G>A c.618G>A	p.Leu206Leu p.Leu206Leu	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	8/12	654/1473	618/1032	206/343			chrX	153671187

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:153669742	C C	A A	1	a0001c0001t0004 a0001c0001t0004	5	HG02572.hp1 HG02622.hp2 HG02647.hp1 others(2): Show HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02818.hp1 HG03130.hp1	3_prime_UTR_variant	MODIFIER	c.396G>T c.396G>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	715	chrX	153669742
chrX:153669781	AG AG	A A	1	a0001c0001t0009 a0001c0001t0009	1	HG02630.hp2 HG02630.hp2	3_prime_UTR_variant	MODIFIER	c.356delC c.356delC	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	675	chrX	153669781
chrX:153669897	C C	CG CG	1	a0001c0001t0002 a0001c0001t0002	21	HG00438.hp1 HG00438.hp2 HG00544.hp2 others(18): Show HG00438.hp1 HG00438.hp2 HG00544.hp2 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG03209.hp1 HG03516.hp1 HG03688.hp1 HG06807.hp2 NA18522.hp1 NA18943.hp1 NA18945.hp1 NA18969.hp2 NA18973.hp2 NA18989.hp1 NA18997.hp2 NA18999.hp1 NA19005.hp1 NA19081.hp2 NA19090.hp1	3_prime_UTR_variant	MODIFIER	c.240dupC c.240dupC	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	559	chrX	153669897
chrX:153669902	G G	T T	1	a0001c0001t0008 a0001c0001t0008	1	HG02818.hp2 HG02818.hp2	3_prime_UTR_variant	MODIFIER	c.236C>A c.236C>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	555	chrX	153669902
chrX:153669913	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG02976.hp1 HG02976.hp1	3_prime_UTR_variant	MODIFIER	c.225C>T c.225C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	544	chrX	153669913
chrX:153669968	A A	T T	4	a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 others(1): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0003c0004t0003	20	HG01109.hp1 HG01934.hp1 HG02109.hp1 others(17): Show HG01109.hp1 HG01934.hp1 HG02109.hp1 HG02257.hp2 HG02451.hp1 HG02615.hp1 HG02723.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02970.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp1 HG03516.hp2 HG03579.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.170T>A c.170T>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	489	chrX	153669968
chrX:153670007	C C	T T	1	a0001c0001t0006 a0001c0001t0006	2	NA18990.hp1 NA19012.hp1 NA18990.hp1 NA19012.hp1	3_prime_UTR_variant	MODIFIER	c.131G>A c.131G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	450	chrX	153670007
chrX:153670032	C C	T T	1	a0001c0001t0007 a0001c0001t0007	1	HG02615.hp1 HG02615.hp1	3_prime_UTR_variant	MODIFIER	c.106G>A c.106G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	425	chrX	153670032
chrX:153670045	C C	A A	1	a0001c0001t0005 a0001c0001t0005	4	HG02280.hp1 NA19030.hp2 NA19043.hp1 others(1): Show HG02280.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.93G>T c.93G>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	12/12	412	chrX	153670045

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:153670139	G G	A A	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG03239.hp2 HG03239.hp2	intron_variant	MODIFIER	c.8-9C>T c.8-9C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	11/11	chrX	153670139
chrX:153670200	C C	T T	32	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(29): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0002g0010 a0001c0001t0006g0016 a0001c0001t0009g0036 a0001c0003t0001g0040 a0002c0002t0001g0041	193	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(190): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG03017.hp1 HG03041.hp1 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp1 HG03540.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03834.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp1 NA18947.hp2 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18997.hp1 NA18999.hp2 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19081.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.8-70G>A c.8-70G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	11/11	chrX	153670200
chrX:153670250	C C	A A	33	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0002g0010 a0001c0001t0002g0056 a0001c0001t0005g0012 a0001c0001t0006g0016 a0001c0003t0001g0040 a0002c0002t0001g0041	198	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(195): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG03017.hp1 HG03041.hp1 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp1 HG03540.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03834.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp1 NA18947.hp2 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19081.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.8-120G>T c.8-120G>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	11/11	chrX	153670250
chrX:153670357	A A	AC AC	1	a0001c0001t0002g0056 a0001c0001t0002g0056	1	NA18997.hp2 NA18997.hp2	intron_variant	MODIFIER	c.7+92dupG c.7+92dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	11/11	chrX	153670357
chrX:153670373	G G	A A	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG01074.hp1 HG01074.hp1	intron_variant	MODIFIER	c.7+77C>T c.7+77C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	11/11	chrX	153670373
chrX:153670386	G G	A A	2	a0001c0001t0001g0028 a0001c0001t0003g0052 a0001c0001t0001g0028 a0001c0001t0003g0052	2	HG02109.hp1 HG03225.hp1 HG02109.hp1 HG03225.hp1	intron_variant	MODIFIER	c.7+64C>T c.7+64C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	11/11	chrX	153670386
chrX:153670664	G G	A A	2	a0001c0001t0001g0015 a0003c0004t0003g0045 a0001c0001t0001g0015 a0003c0004t0003g0045	3	HG01934.hp1 HG02976.hp2 HG03098.hp1 HG01934.hp1 HG02976.hp2 HG03098.hp1	intron_variant	MODIFIER	c.895-70C>T c.895-70C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	10/11	chrX	153670664
chrX:153670668	T T	C C	2	a0001c0001t0001g0015 a0003c0004t0003g0045 a0001c0001t0001g0015 a0003c0004t0003g0045	3	HG01934.hp1 HG02976.hp2 HG03098.hp1 HG01934.hp1 HG02976.hp2 HG03098.hp1	intron_variant	MODIFIER	c.895-74A>G c.895-74A>G	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	10/11	chrX	153670668
chrX:153670711	G G	A A	3	a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0046 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0046	4	HG03209.hp1 HG03516.hp1 HG06807.hp2 others(1): Show HG03209.hp1 HG03516.hp1 HG06807.hp2 NA18522.hp1	intron_variant	MODIFIER	c.894+33C>T c.894+33C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	10/11	chrX	153670711
chrX:153670852	A A	AG AG	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG01243.hp1 HG01243.hp1	intron_variant	MODIFIER	c.807-22dupC c.807-22dupC	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	9/11	chrX	153670852
chrX:153670877	G G	T T	32	a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0014 others(29): Show a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0034 a0001c0001t0001g0044 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0002g0006 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0022 a0001c0001t0002g0043 a0001c0001t0002g0046 a0001c0001t0002g0056 a0001c0001t0003g0003 a0001c0001t0003g0029 a0001c0001t0003g0033 a0001c0001t0003g0042 a0001c0001t0003g0049 a0001c0001t0003g0052 a0001c0001t0004g0011 a0001c0001t0004g0024 a0001c0001t0007g0065 a0001c0001t0008g0031 a0001c0001t0009g0036 a0001c0001t0010g0035 a0003c0004t0003g0045	67	HG00544.hp2 HG01109.hp1 HG01175.hp1 others(64): Show HG00544.hp2 HG01109.hp1 HG01175.hp1 HG01243.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG02109.hp1 HG02109.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03834.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18943.hp1 NA18945.hp1 NA18969.hp2 NA18973.hp2 NA18979.hp1 NA18979.hp2 NA18989.hp1 NA18997.hp2 NA18999.hp1 NA19010.hp2 NA19030.hp1 NA19081.hp2 NA19084.hp2 NA19085.hp1 NA19090.hp1	intron_variant	MODIFIER	c.806+41C>A c.806+41C>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	9/11	chrX	153670877
chrX:153670905	G G	C C	3	a0001c0001t0001g0027 a0001c0001t0003g0049 a0001c0001t0003g0052 a0001c0001t0001g0027 a0001c0001t0003g0049 a0001c0001t0003g0052	3	HG01243.hp1 HG02109.hp1 HG03453.hp1 HG01243.hp1 HG02109.hp1 HG03453.hp1	intron_variant	MODIFIER	c.806+13C>G c.806+13C>G	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	9/11	chrX	153670905
chrX:153671393	G G	C C	1	a0001c0001t0001g0013 a0001c0001t0001g0013	2	HG01891.hp2 NA19030.hp1 HG01891.hp2 NA19030.hp1	intron_variant	MODIFIER	c.539-33C>G c.539-33C>G	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	6/11	chrX	153671393
chrX:153671540	G G	A A	1	a0001c0001t0009g0036 a0001c0001t0009g0036	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.538+9C>T c.538+9C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	6/11	chrX	153671540
chrX:153671724	G G	A A	4	a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 others(1): Show a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 a0001c0001t0004g0024	8	HG01891.hp2 HG02280.hp2 HG02572.hp1 others(5): Show HG01891.hp2 HG02280.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02818.hp1 HG03130.hp1 NA19030.hp1	intron_variant	MODIFIER	c.415-52C>T c.415-52C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	5/11	chrX	153671724
chrX:153671823	AAGGC AAGGC	A A	4	a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 others(1): Show a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 a0001c0001t0004g0024	8	HG01891.hp2 HG02280.hp2 HG02572.hp1 others(5): Show HG01891.hp2 HG02280.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02818.hp1 HG03130.hp1 NA19030.hp1	intron_variant	MODIFIER	c.414+53_414+56delGC others(2): Show c.414+53_414+56delGCCT	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	5/11	chrX	153671823
chrX:153671871	G G	A A	1	a0001c0001t0001g0053 a0001c0001t0001g0053	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.414+9C>T c.414+9C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	5/11	chrX	153671871
chrX:153672020	T T	TG TG	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	NA18985.hp1 NA18985.hp1	splice_region_variant&intron_variant	LOW	c.276-3dupC c.276-3dupC	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	4/11	chrX	153672020
chrX:153672033	G G	A A	1	a0001c0001t0001g0013 a0001c0001t0001g0013	2	HG01891.hp2 NA19030.hp1 HG01891.hp2 NA19030.hp1	intron_variant	MODIFIER	c.276-15C>T c.276-15C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	4/11	chrX	153672033
chrX:153672095	G G	A A	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.275+31C>T c.275+31C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	4/11	chrX	153672095
chrX:153672329	C C	T T	2	a0001c0001t0001g0014 a0001c0001t0003g0052 a0001c0001t0001g0014 a0001c0001t0003g0052	3	HG02109.hp1 HG02895.hp1 HG02897.hp2 HG02109.hp1 HG02895.hp1 HG02897.hp2	intron_variant	MODIFIER	c.201-129G>A c.201-129G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	3/11	chrX	153672329
chrX:153672384	GC GC	G G	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	NA18997.hp1 NA18997.hp1	intron_variant	MODIFIER	c.200+181delG c.200+181delG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	3/11	chrX	153672384
chrX:153672512	C C	T T	4	a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 others(1): Show a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 a0001c0001t0004g0024	8	HG01891.hp2 HG02280.hp2 HG02572.hp1 others(5): Show HG01891.hp2 HG02280.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02818.hp1 HG03130.hp1 NA19030.hp1	intron_variant	MODIFIER	c.200+54G>A c.200+54G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	3/11	chrX	153672512
chrX:153672540	G G	A A	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	NA20300.hp2 NA20300.hp2	intron_variant	MODIFIER	c.200+26C>T c.200+26C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	3/11	chrX	153672540
chrX:153672554	C C	T T	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.200+12G>A c.200+12G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	3/11	chrX	153672554
chrX:153672724	GGGAA GGGAA	G G	1	a0001c0001t0005g0012 a0001c0001t0005g0012	4	HG02280.hp1 NA19030.hp2 NA19043.hp1 others(1): Show HG02280.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp2	intron_variant	MODIFIER	c.69-31_69-28delTTCC c.69-31_69-28delTTCC	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672724
chrX:153672780	G G	A A	4	a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 others(1): Show a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 a0001c0001t0004g0024	8	HG01891.hp2 HG02280.hp2 HG02572.hp1 others(5): Show HG01891.hp2 HG02280.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02818.hp1 HG03130.hp1 NA19030.hp1	intron_variant	MODIFIER	c.69-83C>T c.69-83C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672780
chrX:153672784	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	5	HG00408.hp2 NA18969.hp1 NA18973.hp1 others(2): Show HG00408.hp2 NA18969.hp1 NA18973.hp1 NA19058.hp1 NA19086.hp1	intron_variant	MODIFIER	c.69-87G>A c.69-87G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672784
chrX:153672824	A A	AC AC	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.69-128dupG c.69-128dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672824
chrX:153672872	C C	A A	1	a0001c0001t0003g0033 a0001c0001t0003g0033	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.68+137G>T c.68+137G>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672872
chrX:153672913	A A	AC AC	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	HG01515.hp1 HG01515.hp1	intron_variant	MODIFIER	c.68+95dupG c.68+95dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672913
chrX:153672954	T T	TAC TAC	5	a0001c0001t0001g0005 a0001c0001t0001g0053 a0001c0001t0002g0018 others(2): Show a0001c0001t0001g0005 a0001c0001t0001g0053 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0003g0052	13	HG00609.hp1 HG02109.hp1 HG03017.hp1 others(10): Show HG00609.hp1 HG02109.hp1 HG03017.hp1 HG03209.hp1 HG03516.hp1 NA18522.hp1 NA18974.hp1 NA19063.hp1 NA19067.hp1 NA19068.hp1 NA19077.hp1 NA19089.hp1 NA20300.hp1	intron_variant	MODIFIER	c.68+53_68+54dupGT c.68+53_68+54dupGT	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672954
chrX:153672954	TAC TAC	T T	10	a0001c0001t0001g0002 a0001c0001t0001g0014 a0001c0001t0001g0015 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0034 a0001c0001t0001g0054 a0001c0001t0001g0061 a0001c0001t0009g0036 a0001c0001t0010g0035	25	HG00099.hp1 HG00408.hp1 HG01069.hp1 others(22): Show HG00099.hp1 HG00408.hp1 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01496.hp1 HG01884.hp2 HG02486.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03195.hp1 HG03225.hp1 HG03453.hp2 HG03491.hp2 HG03492.hp1 HG03834.hp2 NA18906.hp1 NA18906.hp2	intron_variant	MODIFIER	c.68+53_68+54delGT c.68+53_68+54delGT	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672954
chrX:153672954	TACAC TACAC	T T	9	a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0032 others(6): Show a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0032 a0001c0001t0001g0060 a0001c0001t0003g0003 a0001c0001t0003g0033 a0001c0001t0007g0065 a0001c0001t0008g0031 a0002c0002t0001g0059	35	HG00741.hp2 HG01175.hp1 HG01516.hp1 others(32): Show HG00741.hp2 HG01175.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02451.hp1 HG02615.hp1 HG02683.hp2 HG02723.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02970.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03490.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03834.hp1 HG03942.hp1 HG04115.hp1 NA18979.hp1 NA18979.hp2 NA19081.hp1 NA19084.hp2 NA19085.hp1 NA20805.hp1	intron_variant	MODIFIER	c.68+51_68+54delGTGT c.68+51_68+54delGTGT	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672954
chrX:153672954	TACACAC TACACAC	T T	9	a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0001g0030 others(6): Show a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0002g0006 a0001c0001t0002g0056 a0001c0001t0003g0029 a0001c0001t0004g0011	20	HG00544.hp2 HG01891.hp2 HG02280.hp2 others(17): Show HG00544.hp2 HG01891.hp2 HG02280.hp2 HG02572.hp1 HG02622.hp2 HG02683.hp1 HG02818.hp1 HG03130.hp1 HG03486.hp1 HG06807.hp1 NA18943.hp1 NA18945.hp1 NA18969.hp2 NA18989.hp1 NA18997.hp2 NA18999.hp1 NA19030.hp1 NA19078.hp2 NA19081.hp2 NA19090.hp1	intron_variant	MODIFIER	c.68+49_68+54delGTGT others(2): Show c.68+49_68+54delGTGTGT	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672954
chrX:153672954	TACACACA others(3): Show TACACACACAC	T T	2	a0001c0001t0002g0019 a0001c0001t0004g0024 a0001c0001t0002g0019 a0001c0001t0004g0024	3	HG02109.hp2 HG02258.hp1 HG02647.hp1 HG02109.hp2 HG02258.hp1 HG02647.hp1	intron_variant	MODIFIER	c.68+45_68+54delGTGT others(6): Show c.68+45_68+54delGTGTGTGTGT	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672954
chrX:153672954	TACACACA others(7): Show TACACACACACACAC	T T	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.68+41_68+54delGTGT others(10): Show c.68+41_68+54delGTGTGTGTGTGTGT	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672954
chrX:153672982	C C	A A	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.68+27G>T c.68+27G>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672982
chrX:153672995	G G	A A	13	a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0020 others(10): Show a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0020 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0002g0006 a0001c0001t0002g0019 a0001c0001t0002g0056 a0002c0002t0001g0059	37	HG00544.hp2 HG00741.hp2 HG01074.hp1 others(34): Show HG00544.hp2 HG00741.hp2 HG01074.hp1 HG01175.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG02109.hp2 HG02257.hp1 HG02258.hp1 HG02451.hp2 HG02683.hp2 HG02738.hp1 HG03195.hp1 HG03486.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 NA18943.hp1 NA18945.hp1 NA18969.hp2 NA18979.hp1 NA18979.hp2 NA18989.hp1 NA18997.hp2 NA18999.hp1 NA19078.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp2 NA19085.hp1 NA19090.hp1 NA20805.hp1	intron_variant	MODIFIER	c.68+14C>T c.68+14C>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672995
chrX:153672996	C C	T T	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.68+13G>A c.68+13G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	2/11	chrX	153672996
chrX:153673237	T T	C C	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	HG01106.hp1 HG01106.hp1	intron_variant	MODIFIER	c.-2-159A>G c.-2-159A>G	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673237
chrX:153673290	T T	TC TC	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	NA18997.hp1 NA18997.hp1	intron_variant	MODIFIER	c.-2-213dupG c.-2-213dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673290
chrX:153673431	G G	GC GC	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.-3+348dupG c.-3+348dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673431
chrX:153673437	A A	AC AC	3	a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0066 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0066	3	HG00544.hp1 HG01243.hp1 NA18997.hp1 HG00544.hp1 HG01243.hp1 NA18997.hp1	intron_variant	MODIFIER	c.-3+342dupG c.-3+342dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673437
chrX:153673451	C C	T T	4	a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 others(1): Show a0001c0001t0001g0013 a0001c0001t0001g0025 a0001c0001t0004g0011 a0001c0001t0004g0024	8	HG01891.hp2 HG02280.hp2 HG02572.hp1 others(5): Show HG01891.hp2 HG02280.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02818.hp1 HG03130.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-3+329G>A c.-3+329G>A	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673451
chrX:153673495	C C	A A	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	HG00741.hp1 HG00741.hp1	intron_variant	MODIFIER	c.-3+285G>T c.-3+285G>T	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673495
chrX:153673522	A A	AC AC	4	a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0066 others(1): Show a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0066 a0001c0001t0002g0022	4	HG01192.hp1 HG02809.hp2 HG03516.hp1 others(1): Show HG01192.hp1 HG02809.hp2 HG03516.hp1 NA18997.hp1	intron_variant	MODIFIER	c.-3+257dupG c.-3+257dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673522
chrX:153673737	G G	GC GC	1	a0001c0001t0007g0065 a0001c0001t0007g0065	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.-3+42dupG c.-3+42dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673737
chrX:153673753	T T	TC TC	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	NA18997.hp1 NA18997.hp1	intron_variant	MODIFIER	c.-3+26dupG c.-3+26dupG	PNCK	ENSG00000130822.16	transcript	ENST00000340888.8	protein_coding	1/11	chrX	153673753

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JoGo Local Haplotype Explorer (on iGV) PNCK_chrX_153664733_153678813

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 10)

GGenebody Level Haplotype Info (Total: 66)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 13)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 66)

Haplotype Details by Sample (Haploid Level) (Total: 276)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 2)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (Exon) (Total: 9)

GGenebody Level Haplotype Variants (Intron) (Total: 49)

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Annotation (Repeats)

Annotation (SNP Array)