Joint Open Genome and Omics Platform (JoGo)

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geneid	5897
ensemblid	ENSG00000175097.9
hgncid	9832
symbol	RAG2
name	recombination activating 2
refseq_nuc	NM_000536.4
refseq_prot	NP_000527.2
ensembl_nuc	ENST00000311485.8
ensembl_prot	ENSP00000308620.4
mane_status	MANE Select
chr	chr11
start	36591943
end	36598236
strand	-
ver	v1.2
region	chr11:36591943-36598236
region5000	chr11:36586943-36603236
regionname0	RAG2_chr11_36591943_36598236
regionname5000	RAG2_chr11_36586943_36603236

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	527	407	84	77	189	14	41	150	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0002	0/0	527	10	10	0	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0003	0/0	527	1	0	0	0	0	1	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0004	0/0	527	1	0	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0005	0/0	527	1	0	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1584	398	78	76	187	14	41	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
c0002	0/0	1584	10	10	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
c0003	0/0	1584	7	6	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
c0004	0/0	1584	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
c0005	0/0	1584	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
c0006	0/0	1584	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
c0007	0/0	1584	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
c0008	0/0	1584	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	805	224	45	28	128	2	20	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
t0002	1/0	805	141	18	40	52	9	21	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
t0003	0/0	805	42	19	10	9	3	1	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
t0004	0/0	805	10	10	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
t0005	0/0	805	2	2	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
t0006	0/0	805	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	128	17	35	49	9	17	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0002	0/0	108	18	6	74	1	9	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0003	0/0	55	10	13	27	0	5	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0004	0/0	9	5	3	0	1	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0005	0/0	9	3	5	0	1	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0006	0/0	9	0	0	8	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0007	0/0	9	0	7	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0008	0/0	7	6	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0009	0/0	6	6	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0010	0/0	6	0	0	6	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0011	0/0	4	4	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0012	0/0	4	4	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0013	0/0	4	3	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0014	0/0	3	3	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0015	0/0	3	0	0	2	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0016	0/0	2	1	0	0	1	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0017	0/1	2	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0018	0/0	2	0	0	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0019	0/0	2	0	0	1	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0020	0/0	2	0	1	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0021	0/0	2	1	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0022	0/0	2	0	0	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0023	0/0	2	0	2	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0024	0/0	2	0	0	0	1	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0025	0/0	2	0	0	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0026	0/0	2	2	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0027	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0028	0/0	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0029	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0030	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0031	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0032	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0033	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0034	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0035	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0036	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0037	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0038	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0039	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0040	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0041	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0042	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0043	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0044	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0045	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0046	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0047	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0048	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0049	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0050	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0051	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0052	0/0	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0053	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0054	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0055	0/0	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0056	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0057	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0058	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0059	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
g0060	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1584	398	78	76	187	14	41	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0003	0/0	1584	7	6	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0004	0/0	1584	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0007	0/0	1584	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0002c0002	0/0	1584	10	10	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0003c0008	0/0	1584	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0004c0005	0/0	1584	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0005c0006	0/0	1584	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	2388	220	45	28	125	2	19	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0001t0002	1/0	2388	140	18	39	52	9	21	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0001t0003	0/0	2388	35	13	9	9	3	1	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0001t0005	0/0	2388	2	2	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0001t0006	0/0	2388	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0003t0003	0/0	2388	7	6	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0004t0001	0/0	2388	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0001c0007t0001	0/0	2388	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0002c0002t0004	0/0	2388	10	10	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0003c0008t0001	0/0	2388	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0004c0005t0001	0/0	2388	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236
a0005c0006t0002	0/0	2388	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	copy fasta	chr11	36586943	36603236

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	0/0	108	18	6	74	1	9	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0003	0/0	55	10	13	27	0	5	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0007	0/0	9	0	7	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0010	0/0	6	0	0	6	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0011	0/0	4	4	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0012	0/0	4	4	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0013	0/0	4	3	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0014	0/0	3	3	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0015	0/0	3	0	0	2	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0017	0/1	2	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0018	0/0	2	0	0	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0019	0/0	2	0	0	1	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0022	0/0	2	0	0	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0024	0/0	2	0	0	0	1	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0025	0/0	2	0	0	2	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0039	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0044	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0047	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0049	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0053	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0054	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0055	0/0	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0056	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0001g0059	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0001	1/0	128	17	35	49	9	17	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0020	0/0	2	0	1	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0021	0/0	2	1	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0023	0/0	2	0	2	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0034	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0035	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0048	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0051	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0057	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0002g0060	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0004	0/0	9	5	3	0	1	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0005	0/0	9	3	5	0	1	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0006	0/0	9	0	0	8	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0016	0/0	2	1	0	0	1	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0027	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0028	0/0	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0029	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0030	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0031	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0003g0033	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0005g0026	0/0	2	2	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0001t0006g0032	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0003t0003g0008	0/0	7	6	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0004t0001g0042	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0001c0007t0001g0043	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0002c0002t0004g0009	0/0	6	6	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0002c0002t0004g0036	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0002c0002t0004g0037	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0002c0002t0004g0038	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0002c0002t0004g0058	0/0	1	1	0	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0003c0008t0001g0045	0/0	1	0	0	0	0	1	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0004c0005t0001g0050	0/0	1	0	0	1	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
a0005c0006t0002g0052	0/0	1	0	1	0	0	0	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0001	EUR	GBR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00099	hp2	a0001	c0001	t0001	g0002	EUR	GBR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00140	hp1	a0001	c0001	t0002	g0001	EUR	GBR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00140	hp2	a0001	c0001	t0001	g0024	EUR	GBR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00408	hp1	a0001	c0001	t0002	g0001	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00408	hp2	a0001	c0001	t0001	g0003	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00438	hp1	a0001	c0001	t0003	g0006	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00438	hp2	a0001	c0001	t0001	g0010	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00544	hp1	a0001	c0001	t0002	g0001	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00544	hp2	a0001	c0001	t0001	g0002	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00597	hp1	a0004	c0005	t0001	g0050	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00597	hp2	a0001	c0001	t0001	g0002	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00609	hp1	a0001	c0001	t0002	g0001	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00609	hp2	a0001	c0001	t0001	g0002	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00621	hp1	a0001	c0001	t0002	g0001	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00621	hp2	a0001	c0001	t0001	g0002	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00639	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00639	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00642	hp1	a0001	c0001	t0001	g0003	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00642	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00673	hp1	a0001	c0001	t0001	g0018	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00673	hp2	a0001	c0001	t0002	g0001	EAS	CHS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00733	hp1	a0001	c0001	t0001	g0003	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00733	hp2	a0001	c0001	t0003	g0005	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00735	hp1	a0001	c0001	t0003	g0028	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00735	hp2	a0001	c0001	t0001	g0002	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00738	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00738	hp2	a0001	c0001	t0003	g0005	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00741	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG00741	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01069	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01069	hp2	a0001	c0001	t0001	g0003	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01070	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01070	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01071	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01071	hp2	a0001	c0001	t0001	g0003	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01074	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01074	hp2	a0001	c0001	t0001	g0007	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01081	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01081	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01099	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01099	hp2	a0001	c0001	t0003	g0005	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01106	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01106	hp2	a0001	c0001	t0003	g0004	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01109	hp1	a0001	c0001	t0001	g0003	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01109	hp2	a0001	c0001	t0002	g0021	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01167	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01167	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01168	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01168	hp2	a0001	c0001	t0001	g0002	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01169	hp1	a0001	c0001	t0001	g0002	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01169	hp2	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01175	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01175	hp2	a0001	c0001	t0001	g0002	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01192	hp1	a0001	c0001	t0002	g0001	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01192	hp2	a0001	c0001	t0001	g0007	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01243	hp1	a0001	c0001	t0001	g0003	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01243	hp2	a0001	c0001	t0001	g0055	AMR	PUR	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01255	hp1	a0001	c0001	t0001	g0007	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01255	hp2	a0001	c0001	t0002	g0001	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01256	hp1	a0001	c0001	t0003	g0005	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01256	hp2	a0001	c0001	t0001	g0002	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01258	hp1	a0001	c0001	t0002	g0001	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01258	hp2	a0001	c0001	t0003	g0004	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01261	hp1	a0001	c0001	t0002	g0001	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01261	hp2	a0001	c0001	t0003	g0004	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01346	hp1	a0001	c0001	t0002	g0001	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01346	hp2	a0001	c0001	t0001	g0003	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01358	hp1	a0001	c0001	t0002	g0001	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01358	hp2	a0001	c0001	t0001	g0017	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01361	hp1	a0001	c0001	t0003	g0005	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01361	hp2	a0001	c0001	t0001	g0003	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01433	hp1	a0001	c0001	t0002	g0023	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01433	hp2	a0005	c0006	t0002	g0052	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01496	hp1	a0001	c0003	t0003	g0008	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01496	hp2	a0001	c0001	t0002	g0001	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01515	hp1	a0001	c0001	t0002	g0001	EUR	IBS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01515	hp2	a0001	c0001	t0002	g0001	EUR	IBS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01516	hp1	a0001	c0001	t0003	g0005	EUR	IBS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01516	hp2	a0001	c0001	t0002	g0001	EUR	IBS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01517	hp1	a0001	c0001	t0002	g0001	EUR	IBS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01517	hp2	a0001	c0001	t0003	g0016	EUR	IBS	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01884	hp1	a0001	c0001	t0001	g0002	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01884	hp2	a0001	c0001	t0002	g0001	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01891	hp1	a0001	c0001	t0002	g0001	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01891	hp2	a0001	c0001	t0001	g0002	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01934	hp1	a0001	c0001	t0002	g0001	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01934	hp2	a0001	c0001	t0001	g0007	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01943	hp1	a0001	c0001	t0001	g0003	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01943	hp2	a0001	c0001	t0001	g0003	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01975	hp1	a0001	c0001	t0001	g0007	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01975	hp2	a0001	c0001	t0001	g0002	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01978	hp1	a0001	c0001	t0001	g0003	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01978	hp2	a0001	c0001	t0002	g0001	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01981	hp1	a0001	c0001	t0001	g0007	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01981	hp2	a0001	c0001	t0002	g0001	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01993	hp1	a0001	c0001	t0002	g0001	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01993	hp2	a0001	c0001	t0001	g0007	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02004	hp1	a0001	c0001	t0002	g0001	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02004	hp2	a0001	c0001	t0002	g0001	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02015	hp1	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02015	hp2	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02027	hp1	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02027	hp2	a0001	c0007	t0001	g0043	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02055	hp1	a0001	c0001	t0001	g0002	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02055	hp2	a0001	c0001	t0001	g0002	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02056	hp1	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02056	hp2	a0001	c0001	t0002	g0001	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02071	hp1	a0001	c0001	t0002	g0001	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02071	hp2	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02074	hp1	a0001	c0001	t0001	g0003	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02074	hp2	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02080	hp1	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02080	hp2	a0001	c0001	t0002	g0001	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02083	hp1	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02083	hp2	a0001	c0001	t0002	g0001	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02129	hp1	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02129	hp2	a0001	c0001	t0001	g0003	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02135	hp1	a0001	c0001	t0001	g0002	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02135	hp2	a0001	c0001	t0002	g0035	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02145	hp1	a0001	c0001	t0002	g0001	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02145	hp2	a0001	c0001	t0003	g0031	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02148	hp1	a0001	c0001	t0001	g0003	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02148	hp2	a0001	c0001	t0002	g0023	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02155	hp1	a0001	c0001	t0002	g0001	EAS	CDX	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02155	hp2	a0001	c0001	t0001	g0002	EAS	CDX	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02257	hp1	a0001	c0001	t0003	g0004	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02257	hp2	a0001	c0001	t0001	g0003	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02258	hp1	a0001	c0001	t0001	g0002	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02258	hp2	a0001	c0001	t0002	g0001	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02280	hp1	a0001	c0001	t0002	g0001	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02280	hp2	a0001	c0001	t0003	g0005	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02300	hp1	a0001	c0001	t0001	g0003	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02300	hp2	a0001	c0001	t0002	g0001	AMR	PEL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02451	hp1	a0001	c0001	t0001	g0040	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02451	hp2	a0002	c0002	t0004	g0058	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02523	hp1	a0001	c0001	t0006	g0032	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02523	hp2	a0001	c0001	t0002	g0001	EAS	KHV	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02572	hp1	a0001	c0001	t0001	g0003	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02572	hp2	a0002	c0002	t0004	g0037	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02602	hp1	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02602	hp2	a0001	c0001	t0001	g0053	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02615	hp1	a0001	c0001	t0001	g0002	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02615	hp2	a0001	c0001	t0001	g0011	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02622	hp1	a0001	c0001	t0001	g0013	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02622	hp2	a0001	c0001	t0001	g0003	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02630	hp1	a0001	c0001	t0001	g0003	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02630	hp2	a0001	c0001	t0001	g0049	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02647	hp1	a0001	c0001	t0002	g0001	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02647	hp2	a0001	c0003	t0003	g0008	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02683	hp1	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02683	hp2	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02698	hp1	a0001	c0001	t0001	g0054	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02698	hp2	a0001	c0001	t0001	g0015	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02717	hp1	a0001	c0001	t0001	g0002	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02717	hp2	a0001	c0001	t0001	g0013	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02723	hp1	a0001	c0001	t0001	g0003	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02723	hp2	a0002	c0002	t0004	g0009	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02735	hp1	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02735	hp2	a0001	c0001	t0001	g0003	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02738	hp1	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02738	hp2	a0001	c0001	t0001	g0002	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02809	hp1	a0001	c0001	t0002	g0001	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02809	hp2	a0001	c0001	t0001	g0002	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02818	hp1	a0001	c0001	t0005	g0026	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02818	hp2	a0001	c0001	t0002	g0001	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02886	hp1	a0002	c0002	t0004	g0038	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02886	hp2	a0002	c0002	t0004	g0009	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02895	hp1	a0001	c0001	t0003	g0004	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02895	hp2	a0001	c0001	t0002	g0001	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02896	hp1	a0001	c0001	t0001	g0002	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02896	hp2	a0001	c0001	t0003	g0004	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02897	hp1	a0001	c0001	t0003	g0004	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02897	hp2	a0001	c0001	t0002	g0001	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02922	hp1	a0001	c0001	t0001	g0003	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02922	hp2	a0001	c0001	t0001	g0002	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02965	hp1	a0001	c0001	t0001	g0003	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02965	hp2	a0001	c0001	t0005	g0026	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02970	hp1	a0001	c0001	t0001	g0011	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02970	hp2	a0001	c0001	t0002	g0001	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02976	hp1	a0001	c0001	t0001	g0002	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02976	hp2	a0001	c0001	t0002	g0001	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03041	hp1	a0001	c0003	t0003	g0008	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03041	hp2	a0001	c0001	t0003	g0016	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03098	hp1	a0001	c0001	t0003	g0029	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03098	hp2	a0001	c0003	t0003	g0008	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03130	hp1	a0001	c0001	t0001	g0013	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03130	hp2	a0002	c0002	t0004	g0036	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03139	hp1	a0001	c0003	t0003	g0008	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03139	hp2	a0001	c0001	t0001	g0002	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03195	hp1	a0001	c0001	t0001	g0011	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03195	hp2	a0001	c0003	t0003	g0008	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03209	hp1	a0001	c0001	t0001	g0014	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03209	hp2	a0001	c0001	t0003	g0005	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03225	hp1	a0001	c0001	t0001	g0002	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03225	hp2	a0001	c0001	t0001	g0003	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03239	hp1	a0001	c0001	t0003	g0006	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03239	hp2	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03453	hp1	a0001	c0001	t0002	g0001	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03453	hp2	a0002	c0002	t0004	g0009	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03486	hp2	a0002	c0002	t0004	g0009	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03491	hp2	a0001	c0001	t0001	g0024	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03492	hp1	a0001	c0001	t0001	g0002	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03492	hp2	a0001	c0001	t0002	g0060	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03516	hp1	a0001	c0001	t0002	g0001	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03516	hp2	a0001	c0001	t0003	g0030	AFR	ESN	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03540	hp1	a0001	c0001	t0002	g0021	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03540	hp2	a0001	c0001	t0001	g0003	AFR	GWD	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03579	hp1	a0002	c0002	t0004	g0009	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03579	hp2	a0001	c0001	t0003	g0027	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03654	hp1	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03654	hp2	a0001	c0001	t0001	g0002	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03669	hp1	a0001	c0001	t0001	g0002	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03669	hp2	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03688	hp1	a0001	c0001	t0001	g0003	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03688	hp2	a0001	c0001	t0002	g0034	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03704	hp1	a0001	c0001	t0001	g0003	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03704	hp2	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03710	hp1	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03710	hp2	a0001	c0001	t0002	g0001	SAS	PJL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03831	hp1	a0001	c0001	t0002	g0051	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03831	hp2	a0001	c0001	t0001	g0002	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03834	hp1	a0001	c0001	t0002	g0001	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03834	hp2	a0001	c0001	t0002	g0001	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03942	hp1	a0001	c0001	t0001	g0003	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03942	hp2	a0001	c0001	t0002	g0001	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04115	hp1	a0001	c0001	t0001	g0002	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04115	hp2	a0001	c0001	t0001	g0019	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04184	hp1	a0001	c0001	t0002	g0001	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04184	hp2	a0001	c0001	t0002	g0001	SAS	BEB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04204	hp1	a0003	c0008	t0001	g0045	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04204	hp2	a0001	c0001	t0002	g0001	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04228	hp1	a0001	c0001	t0001	g0003	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG04228	hp2	a0001	c0001	t0001	g0002	SAS	STU	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18612	hp1	a0001	c0001	t0002	g0001	EAS	CHB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18612	hp2	a0001	c0001	t0001	g0002	EAS	CHB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18747	hp1	a0001	c0001	t0001	g0025	EAS	CHB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18747	hp2	a0001	c0001	t0002	g0048	EAS	CHB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18939	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18939	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18941	hp1	a0001	c0004	t0001	g0042	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18941	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18942	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18942	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18943	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18943	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18944	hp1	a0001	c0001	t0001	g0010	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18944	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18945	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18945	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18946	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18946	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18947	hp1	a0001	c0001	t0001	g0015	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18947	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18948	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18948	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18949	hp1	a0001	c0001	t0003	g0006	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18949	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18950	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18950	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18951	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18951	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18953	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18953	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18954	hp1	a0001	c0001	t0001	g0010	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18954	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18957	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18957	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18959	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18959	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18960	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18960	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18961	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18961	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18962	hp1	a0001	c0001	t0001	g0010	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18962	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18964	hp1	a0001	c0001	t0001	g0022	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18964	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18965	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18965	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18966	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18966	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18967	hp1	a0001	c0001	t0003	g0006	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18967	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18968	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18968	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18969	hp1	a0001	c0001	t0001	g0007	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18969	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18970	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18970	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18971	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18971	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18972	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18972	hp2	a0001	c0001	t0001	g0007	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18973	hp1	a0001	c0001	t0001	g0013	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18973	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18974	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18974	hp2	a0001	c0001	t0001	g0039	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18975	hp1	a0001	c0001	t0002	g0020	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18975	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18977	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18977	hp2	a0001	c0001	t0003	g0006	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18978	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18978	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18979	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18979	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18981	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18981	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18982	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18982	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18984	hp1	a0001	c0001	t0003	g0006	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18984	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18988	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18988	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18989	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18989	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18990	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18990	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18991	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18991	hp2	a0001	c0001	t0001	g0015	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18992	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18992	hp2	a0001	c0001	t0001	g0041	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18994	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18994	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18995	hp1	a0001	c0001	t0003	g0006	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18995	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18998	hp1	a0001	c0001	t0001	g0025	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18998	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19000	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19000	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19002	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19002	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19003	hp1	a0001	c0001	t0001	g0022	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19003	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19004	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19004	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19005	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19005	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19006	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19006	hp2	a0001	c0001	t0001	g0047	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19007	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19007	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19010	hp1	a0001	c0001	t0003	g0006	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19010	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19011	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19011	hp2	a0001	c0001	t0001	g0018	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19012	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19012	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19030	hp1	a0001	c0003	t0003	g0008	AFR	LWK	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19030	hp2	a0001	c0001	t0001	g0044	AFR	LWK	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19043	hp1	a0001	c0001	t0001	g0011	AFR	LWK	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19043	hp2	a0001	c0001	t0001	g0002	AFR	LWK	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19054	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19054	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19055	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19055	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19057	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19057	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19058	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19058	hp2	a0001	c0001	t0001	g0046	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19064	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19064	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19066	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19066	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19067	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19068	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19068	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19072	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19072	hp2	a0001	c0001	t0001	g0010	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19074	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19074	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19077	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19077	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19078	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19078	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19081	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19081	hp2	a0001	c0001	t0001	g0056	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19083	hp1	a0001	c0001	t0001	g0019	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19083	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19084	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19084	hp2	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19088	hp1	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19088	hp2	a0001	c0001	t0001	g0010	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19089	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19089	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19090	hp1	a0001	c0001	t0003	g0033	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19090	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19091	hp1	a0001	c0001	t0001	g0059	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19091	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19240	hp1	a0001	c0001	t0003	g0004	AFR	YRI	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA19240	hp2	a0001	c0001	t0001	g0012	AFR	YRI	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20129	hp1	a0001	c0001	t0002	g0001	AFR	ASW	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20129	hp2	a0001	c0001	t0001	g0002	AFR	ASW	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20752	hp1	a0001	c0001	t0002	g0001	EUR	TSI	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20752	hp2	a0001	c0001	t0002	g0001	EUR	TSI	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20805	hp1	a0001	c0001	t0002	g0001	EUR	TSI	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20805	hp2	a0001	c0001	t0003	g0004	EUR	TSI	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20905	hp2	a0001	c0001	t0002	g0057	SAS	GIH	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01123	hp1	a0001	c0001	t0002	g0001	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG01123	hp2	a0001	c0001	t0002	g0020	AMR	CLM	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02109	hp1	a0001	c0001	t0001	g0012	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02109	hp2	a0001	c0001	t0001	g0012	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02486	hp1	a0001	c0001	t0001	g0014	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG02486	hp2	a0001	c0001	t0001	g0012	AFR	ACB	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03471	hp1	a0001	c0001	t0002	g0001	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG03471	hp2	a0001	c0001	t0001	g0002	AFR	MSL	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG06807	hp1	a0001	c0001	t0001	g0002	AFR	USA	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
HG06807	hp2	a0001	c0001	t0001	g0014	AFR	USA	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18955	hp1	a0001	c0001	t0002	g0001	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA18955	hp2	a0001	c0001	t0003	g0006	EAS	JPT	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20300	hp1	a0001	c0001	t0001	g0003	AFR	USA	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA20300	hp2	a0002	c0002	t0004	g0009	AFR	USA	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA21309	hp1	a0001	c0001	t0003	g0005	AFR	LWK	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
NA21309	hp2	a0001	c0001	t0002	g0001	AFR	LWK	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0017	REF	REF	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236
homoSapiens_grch38	hp1	a0001	c0001	t0002	g0001	REF	REF	RAG2_chr11_36586943_36603236	RAG2	chr11	36586943	36603236

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr11:36593011	G G	T T	1	a0005 a0005	1	HG01433.hp2 HG01433.hp2	missense_variant	MODERATE	c.1158C>A c.1158C>A	p.Phe386Leu p.Phe386Leu	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	1320/2388	1158/1584	386/527	chr11	36593011
chr11:36593291	T T	C C	1	a0002 a0002	10	HG02451.hp2 HG02572.hp2 HG02723.hp2 others(7): Show HG02451.hp2 HG02572.hp2 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG03130.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA20300.hp2	missense_variant	MODERATE	c.878A>G c.878A>G	p.Glu293Gly p.Glu293Gly	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	1040/2388	878/1584	293/527	chr11	36593291
chr11:36593355	C C	T T	1	a0004 a0004	1	HG00597.hp1 HG00597.hp1	missense_variant	MODERATE	c.814G>A c.814G>A	p.Val272Ile p.Val272Ile	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	976/2388	814/1584	272/527	chr11	36593355
chr11:36593525	G G	A A	1	a0003 a0003	1	HG04204.hp1 HG04204.hp1	missense_variant	MODERATE	c.644C>T c.644C>T	p.Thr215Ile p.Thr215Ile	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	806/2388	644/1584	215/527	chr11	36593525

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr11:36592726	A A	G G	1	a0001c0007 a0001c0007	1	HG02027.hp2 HG02027.hp2	synonymous_variant	LOW	c.1443T>C c.1443T>C	p.His481His p.His481His	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	1605/2388	1443/1584	481/527	chr11	36592726
chr11:36593428	C C	T T	1	a0001c0003 a0001c0003	7	HG01496.hp1 HG02647.hp2 HG03041.hp1 others(4): Show HG01496.hp1 HG02647.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 NA19030.hp1	synonymous_variant	LOW	c.741G>A c.741G>A	p.Val247Val p.Val247Val	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	903/2388	741/1584	247/527	chr11	36593428
chr11:36594106	C C	T T	1	a0001c0004 a0001c0004	1	NA18941.hp1 NA18941.hp1	synonymous_variant	LOW	c.63G>A c.63G>A	p.Leu21Leu p.Leu21Leu	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	225/2388	63/1584	21/527	chr11	36594106

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr11:36592257	T T	C C	9	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0003t0003 a0001c0004t0001 a0001c0007t0001 a0002c0002t0004 a0003c0008t0001 a0004c0005t0001	278	HG00099.hp2 HG00140.hp2 HG00408.hp2 others(275): Show HG00099.hp2 HG00140.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03831.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp1 NA18974.hp2 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18988.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp2 NA19057.hp1 NA19058.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19078.hp1 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.328A>G c.328A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	328	chr11	36592257
chr11:36592358	A A	G G	1	a0001c0001t0005 a0001c0001t0005	2	HG02818.hp1 HG02965.hp2 HG02818.hp1 HG02965.hp2	3_prime_UTR_variant	MODIFIER	c.227T>C c.227T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	227	chr11	36592358
chr11:36592402	G G	T T	1	a0002c0002t0004 a0002c0002t0004	10	HG02451.hp2 HG02572.hp2 HG02723.hp2 others(7): Show HG02451.hp2 HG02572.hp2 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG03130.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.183C>A c.183C>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	183	chr11	36592402
chr11:36592441	C C	A A	1	a0002c0002t0004 a0002c0002t0004	10	HG02451.hp2 HG02572.hp2 HG02723.hp2 others(7): Show HG02451.hp2 HG02572.hp2 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG03130.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.144G>T c.144G>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	2/2	144	chr11	36592441
chr11:36598211	A A	G G	3	a0001c0001t0003 a0001c0001t0006 a0001c0003t0003 a0001c0001t0003 a0001c0001t0006 a0001c0003t0003	43	HG00438.hp1 HG00733.hp2 HG00735.hp1 others(40): Show HG00438.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02523.hp1 HG02647.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03516.hp2 HG03579.hp2 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1 NA19030.hp1 NA19090.hp1 NA19240.hp1 NA20805.hp2 NA21309.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-137T>C c.-137T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/2		chr11	36598211

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr11:36594242	T T	A A	2	a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0036 a0002c0002t0004g0037	2	HG02572.hp2 HG03130.hp2 HG02572.hp2 HG03130.hp2	intron_variant	MODIFIER	c.-27-47A>T c.-27-47A>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36594242
chr11:36594300	T T	A A	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	NA18974.hp2 NA18974.hp2	intron_variant	MODIFIER	c.-27-105A>T c.-27-105A>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36594300
chr11:36594379	A A	G G	1	a0001c0001t0002g0051 a0001c0001t0002g0051	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.-27-184T>C c.-27-184T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36594379
chr11:36594409	A A	G G	1	a0002c0002t0004g0036 a0002c0002t0004g0036	1	HG03130.hp2 HG03130.hp2	intron_variant	MODIFIER	c.-27-214T>C c.-27-214T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36594409
chr11:36594410	T T	C C	1	a0001c0001t0001g0022 a0001c0001t0001g0022	2	NA18964.hp1 NA19003.hp1 NA18964.hp1 NA19003.hp1	intron_variant	MODIFIER	c.-27-215A>G c.-27-215A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36594410
chr11:36594508	G G	C C	1	a0002c0002t0004g0009 a0002c0002t0004g0009	6	HG02723.hp2 HG02886.hp2 HG03453.hp2 others(3): Show HG02723.hp2 HG02886.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-27-313C>G c.-27-313C>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36594508
chr11:36594562	G G	C C	20	a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 others(17): Show a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0006g0032 a0001c0003t0003g0008 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038 a0002c0002t0004g0058 a0003c0008t0001g0045	60	HG00438.hp1 HG00733.hp2 HG00735.hp1 others(57): Show HG00438.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG04204.hp1 NA18747.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA18998.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp1 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-27-367C>G c.-27-367C>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36594562
chr11:36595200	G G	A A	3	a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032 a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032	11	HG00438.hp1 HG02523.hp1 HG03239.hp1 others(8): Show HG00438.hp1 HG02523.hp1 HG03239.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-27-1005C>T c.-27-1005C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595200
chr11:36595228	C C	T T	6	a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0019 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0024 a0004c0005t0001g0050	66	HG00140.hp2 HG00408.hp2 HG00597.hp1 others(63): Show HG00140.hp2 HG00408.hp2 HG00597.hp1 HG00642.hp1 HG00733.hp1 HG01069.hp2 HG01071.hp2 HG01109.hp1 HG01243.hp1 HG01346.hp2 HG01361.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG02074.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02148.hp1 HG02257.hp2 HG02300.hp1 HG02486.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02735.hp2 HG02922.hp1 HG02965.hp1 HG03225.hp2 HG03491.hp2 HG03540.hp2 HG03688.hp1 HG03704.hp1 HG03942.hp1 HG04115.hp2 HG04228.hp1 NA18939.hp1 NA18945.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18964.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp2 NA18971.hp2 NA18977.hp1 NA18978.hp1 NA18979.hp1 NA18982.hp2 NA18990.hp1 NA19003.hp1 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19055.hp2 NA19068.hp2 NA19072.hp1 NA19074.hp1 NA19083.hp1 NA19240.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-27-1033G>A c.-27-1033G>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595228
chr11:36595234	A A	G G	1	a0001c0001t0002g0021 a0001c0001t0002g0021	2	HG01109.hp2 HG03540.hp1 HG01109.hp2 HG03540.hp1	intron_variant	MODIFIER	c.-27-1039T>C c.-27-1039T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595234
chr11:36595317	A A	G G	39	a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0010 others(36): Show a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0005g0026 a0001c0001t0006g0032 a0001c0003t0003g0008 a0001c0004t0001g0042 a0001c0007t0001g0043 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038 a0002c0002t0004g0058	209	HG00099.hp2 HG00438.hp1 HG00438.hp2 others(206): Show HG00099.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01074.hp2 HG01099.hp2 HG01106.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02145.hp2 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03831.hp2 HG04115.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp2 NA18957.hp2 NA18959.hp1 NA18962.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18974.hp2 NA18975.hp2 NA18977.hp2 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18988.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp2 NA19074.hp2 NA19077.hp2 NA19078.hp1 NA19081.hp1 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-27-1122T>C c.-27-1122T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595317
chr11:36595455	G G	A A	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	NA19058.hp2 NA19058.hp2	intron_variant	MODIFIER	c.-27-1260C>T c.-27-1260C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595455
chr11:36595503	A A	G G	1	a0002c0002t0004g0058 a0002c0002t0004g0058	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.-27-1308T>C c.-27-1308T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595503
chr11:36595535	A A	G G	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	NA18992.hp2 NA18992.hp2	intron_variant	MODIFIER	c.-27-1340T>C c.-27-1340T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595535
chr11:36595597	T T	G G	3	a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032 a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032	11	HG00438.hp1 HG02523.hp1 HG03239.hp1 others(8): Show HG00438.hp1 HG02523.hp1 HG03239.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-27-1402A>C c.-27-1402A>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595597
chr11:36595644	T T	C C	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	NA18747.hp1 NA18998.hp1 NA18747.hp1 NA18998.hp1	intron_variant	MODIFIER	c.-27-1449A>G c.-27-1449A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595644
chr11:36595718	G G	A A	3	a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032 a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032	11	HG00438.hp1 HG02523.hp1 HG03239.hp1 others(8): Show HG00438.hp1 HG02523.hp1 HG03239.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-27-1523C>T c.-27-1523C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595718
chr11:36595754	C C	T T	5	a0001c0001t0001g0011 a0001c0001t0003g0006 a0001c0001t0003g0033 others(2): Show a0001c0001t0001g0011 a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032 a0002c0002t0004g0038	16	HG00438.hp1 HG02523.hp1 HG02615.hp2 others(13): Show HG00438.hp1 HG02523.hp1 HG02615.hp2 HG02886.hp1 HG02970.hp1 HG03195.hp1 HG03239.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1 NA19043.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-27-1559G>A c.-27-1559G>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595754
chr11:36595761	T T	C C	3	a0001c0001t0001g0011 a0001c0001t0005g0026 a0002c0002t0004g0038 a0001c0001t0001g0011 a0001c0001t0005g0026 a0002c0002t0004g0038	7	HG02615.hp2 HG02818.hp1 HG02886.hp1 others(4): Show HG02615.hp2 HG02818.hp1 HG02886.hp1 HG02965.hp2 HG02970.hp1 HG03195.hp1 NA19043.hp1	intron_variant	MODIFIER	c.-27-1566A>G c.-27-1566A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595761
chr11:36595789	A A	T T	1	a0001c0001t0001g0015 a0001c0001t0001g0015	3	HG02698.hp2 NA18947.hp1 NA18991.hp2 HG02698.hp2 NA18947.hp1 NA18991.hp2	intron_variant	MODIFIER	c.-27-1594T>A c.-27-1594T>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595789
chr11:36595804	C C	T T	1	a0001c0001t0002g0048 a0001c0001t0002g0048	1	NA18747.hp2 NA18747.hp2	intron_variant	MODIFIER	c.-27-1609G>A c.-27-1609G>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595804
chr11:36595945	A A	G G	1	a0001c0001t0001g0018 a0001c0001t0001g0018	2	HG00673.hp1 NA19011.hp2 HG00673.hp1 NA19011.hp2	intron_variant	MODIFIER	c.-27-1750T>C c.-27-1750T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36595945
chr11:36596019	T T	C C	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	NA19006.hp2 NA19006.hp2	intron_variant	MODIFIER	c.-27-1824A>G c.-27-1824A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596019
chr11:36596026	A A	C C	21	a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0001g0040 others(18): Show a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0001g0040 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0005g0026 a0001c0001t0006g0032 a0001c0003t0003g0008 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038 a0002c0002t0004g0058	62	HG00438.hp1 HG00733.hp2 HG00735.hp1 others(59): Show HG00438.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 NA18747.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA18998.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp1 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-27-1831T>G c.-27-1831T>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596026
chr11:36596065	C C	T T	1	a0001c0001t0003g0028 a0001c0001t0003g0028	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.-27-1870G>A c.-27-1870G>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596065
chr11:36596211	G G	GT GT	2	a0001c0001t0003g0016 a0001c0003t0003g0008 a0001c0001t0003g0016 a0001c0003t0003g0008	9	HG01496.hp1 HG01517.hp2 HG02647.hp2 others(6): Show HG01496.hp1 HG01517.hp2 HG02647.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 NA19030.hp1	intron_variant	MODIFIER	c.-28+1890dupA c.-28+1890dupA	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596211
chr11:36596211	G G	GTT GTT	3	a0001c0001t0001g0013 a0001c0001t0003g0005 a0001c0001t0003g0028 a0001c0001t0001g0013 a0001c0001t0003g0005 a0001c0001t0003g0028	14	HG00733.hp2 HG00735.hp1 HG00738.hp2 others(11): Show HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01256.hp1 HG01361.hp1 HG01516.hp1 HG02280.hp2 HG02622.hp1 HG02717.hp2 HG03130.hp1 HG03209.hp2 NA18973.hp1 NA21309.hp1	intron_variant	MODIFIER	c.-28+1889_-28+1890d others(4): Show c.-28+1889_-28+1890dupAA	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596211
chr11:36596211	G G	GTTT GTTT	3	a0001c0001t0001g0014 a0001c0001t0003g0004 a0001c0001t0003g0030 a0001c0001t0001g0014 a0001c0001t0003g0004 a0001c0001t0003g0030	13	HG01106.hp2 HG01258.hp2 HG01261.hp2 others(10): Show HG01106.hp2 HG01258.hp2 HG01261.hp2 HG02257.hp1 HG02486.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03209.hp1 HG03516.hp2 HG06807.hp2 NA19240.hp1 NA20805.hp2	intron_variant	MODIFIER	c.-28+1888_-28+1890d others(5): Show c.-28+1888_-28+1890dupAAA	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596211
chr11:36596211	G G	GTTTTTTT others(9): Show GTTTTTTTTTTTTTTTT	1	a0002c0002t0004g0058 a0002c0002t0004g0058	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.-28+1890_-28+1891i others(18): Show c.-28+1890_-28+1891insAAAAAAAAAAAAAAAA	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596211
chr11:36596218	TTTTG TTTTG	T T	2	a0001c0001t0003g0006 a0001c0001t0006g0032 a0001c0001t0003g0006 a0001c0001t0006g0032	10	HG00438.hp1 HG02523.hp1 HG03239.hp1 others(7): Show HG00438.hp1 HG02523.hp1 HG03239.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1	intron_variant	MODIFIER	c.-28+1880_-28+1883d others(6): Show c.-28+1880_-28+1883delCAAA	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596218
chr11:36596222	G G	GT GT	20	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0015 others(17): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0002g0020 a0001c0004t0001g0042 a0001c0007t0001g0043 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0003c0008t0001g0045	143	HG00099.hp2 HG00438.hp2 HG00544.hp2 others(140): Show HG00099.hp2 HG00438.hp2 HG00544.hp2 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00673.hp1 HG00735.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01256.hp2 HG01358.hp2 HG01884.hp1 HG01891.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp1 HG02155.hp2 HG02258.hp1 HG02451.hp1 HG02572.hp2 HG02615.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02922.hp2 HG02976.hp1 HG03130.hp2 HG03139.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp2 HG03669.hp1 HG03831.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18953.hp1 NA18954.hp1 NA18957.hp2 NA18959.hp1 NA18962.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18971.hp1 NA18975.hp1 NA18975.hp2 NA18981.hp2 NA18982.hp1 NA18988.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp2 NA19074.hp2 NA19077.hp2 NA19078.hp1 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-28+1879dupA c.-28+1879dupA	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596222
chr11:36596222	G G	GTT GTT	4	a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0039 others(1): Show a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0039 a0001c0001t0001g0054	15	HG01074.hp2 HG01192.hp2 HG01255.hp1 others(12): Show HG01074.hp2 HG01192.hp2 HG01255.hp1 HG01934.hp2 HG01975.hp1 HG01981.hp1 HG01993.hp2 HG02615.hp2 HG02698.hp1 HG02970.hp1 HG03195.hp1 NA18969.hp1 NA18972.hp2 NA18974.hp2 NA19043.hp1	intron_variant	MODIFIER	c.-28+1878_-28+1879d others(4): Show c.-28+1878_-28+1879dupAA	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596222
chr11:36596222	G G	T T	12	a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0003g0004 others(9): Show a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0003t0003g0008 a0002c0002t0004g0058	40	HG00733.hp2 HG00735.hp1 HG00738.hp2 others(37): Show HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02622.hp1 HG02647.hp2 HG02717.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03516.hp2 HG03579.hp2 HG06807.hp2 NA18973.hp1 NA19030.hp1 NA19240.hp1 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-28+1880C>A c.-28+1880C>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596222
chr11:36596233	T T	G G	1	a0001c0001t0002g0023 a0001c0001t0002g0023	2	HG01433.hp1 HG02148.hp2 HG01433.hp1 HG02148.hp2	intron_variant	MODIFIER	c.-28+1869A>C c.-28+1869A>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596233
chr11:36596260	C C	T T	1	a0001c0001t0001g0017 a0001c0001t0001g0017	2	HG01358.hp2 homoSapiens_chm13v2.hp1 HG01358.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-28+1842G>A c.-28+1842G>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596260
chr11:36596265	G G	A A	3	a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032 a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032	11	HG00438.hp1 HG02523.hp1 HG03239.hp1 others(8): Show HG00438.hp1 HG02523.hp1 HG03239.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-28+1837C>T c.-28+1837C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596265
chr11:36596308	C C	A A	1	a0001c0001t0001g0024 a0001c0001t0001g0024	2	HG00140.hp2 HG03491.hp2 HG00140.hp2 HG03491.hp2	intron_variant	MODIFIER	c.-28+1794G>T c.-28+1794G>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596308
chr11:36596323	G G	A A	2	a0001c0001t0001g0025 a0001c0001t0001g0054 a0001c0001t0001g0025 a0001c0001t0001g0054	3	HG02698.hp1 NA18747.hp1 NA18998.hp1 HG02698.hp1 NA18747.hp1 NA18998.hp1	intron_variant	MODIFIER	c.-28+1779C>T c.-28+1779C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596323
chr11:36596333	G G	T T	1	a0001c0001t0001g0012 a0001c0001t0001g0012	4	HG02109.hp1 HG02109.hp2 HG02486.hp2 others(1): Show HG02109.hp1 HG02109.hp2 HG02486.hp2 NA19240.hp2	intron_variant	MODIFIER	c.-28+1769C>A c.-28+1769C>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596333
chr11:36596439	T T	C C	20	a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 others(17): Show a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0005g0026 a0001c0001t0006g0032 a0001c0003t0003g0008 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038 a0002c0002t0004g0058	61	HG00438.hp1 HG00733.hp2 HG00735.hp1 others(58): Show HG00438.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 NA18747.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA18998.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp1 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-28+1663A>G c.-28+1663A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596439
chr11:36596446	C C	T T	1	a0001c0001t0003g0027 a0001c0001t0003g0027	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.-28+1656G>A c.-28+1656G>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596446
chr11:36596475	G G	A A	6	a0001c0001t0001g0011 a0001c0001t0005g0026 a0002c0002t0004g0009 others(3): Show a0001c0001t0001g0011 a0001c0001t0005g0026 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038	15	HG02572.hp2 HG02615.hp2 HG02723.hp2 others(12): Show HG02572.hp2 HG02615.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02965.hp2 HG02970.hp1 HG03130.hp2 HG03195.hp1 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA19043.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-28+1627C>T c.-28+1627C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596475
chr11:36596695	C C	T T	3	a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037	8	HG02572.hp2 HG02723.hp2 HG02886.hp2 others(5): Show HG02572.hp2 HG02723.hp2 HG02886.hp2 HG03130.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-28+1407G>A c.-28+1407G>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596695
chr11:36596713	A A	C C	2	a0001c0001t0001g0010 a0001c0001t0001g0056 a0001c0001t0001g0010 a0001c0001t0001g0056	7	HG00438.hp2 NA18944.hp1 NA18954.hp1 others(4): Show HG00438.hp2 NA18944.hp1 NA18954.hp1 NA18962.hp1 NA19072.hp2 NA19081.hp2 NA19088.hp2	intron_variant	MODIFIER	c.-28+1389T>G c.-28+1389T>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596713
chr11:36596839	G G	T T	20	a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 others(17): Show a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0005g0026 a0001c0001t0006g0032 a0001c0003t0003g0008 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038 a0002c0002t0004g0058	61	HG00438.hp1 HG00733.hp2 HG00735.hp1 others(58): Show HG00438.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 NA18747.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA18998.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp1 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-28+1263C>A c.-28+1263C>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596839
chr11:36596904	A A	G G	20	a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 others(17): Show a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0005g0026 a0001c0001t0006g0032 a0001c0003t0003g0008 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038 a0002c0002t0004g0058	61	HG00438.hp1 HG00733.hp2 HG00735.hp1 others(58): Show HG00438.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 NA18747.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA18998.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp1 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-28+1198T>C c.-28+1198T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596904
chr11:36596999	T T	A A	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG01243.hp2 HG01243.hp2	intron_variant	MODIFIER	c.-28+1103A>T c.-28+1103A>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36596999
chr11:36597100	A A	G G	3	a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037	8	HG02572.hp2 HG02723.hp2 HG02886.hp2 others(5): Show HG02572.hp2 HG02723.hp2 HG02886.hp2 HG03130.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-28+1002T>C c.-28+1002T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597100
chr11:36597125	A A	G G	6	a0001c0001t0001g0011 a0001c0001t0005g0026 a0002c0002t0004g0009 others(3): Show a0001c0001t0001g0011 a0001c0001t0005g0026 a0002c0002t0004g0009 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038	15	HG02572.hp2 HG02615.hp2 HG02723.hp2 others(12): Show HG02572.hp2 HG02615.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02965.hp2 HG02970.hp1 HG03130.hp2 HG03195.hp1 HG03453.hp2 HG03486.hp2 HG03579.hp1 NA19043.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-28+977T>C c.-28+977T>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597125
chr11:36597333	A A	C C	11	a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 others(8): Show a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0003t0003g0008 a0002c0002t0004g0058	35	HG00733.hp2 HG00735.hp1 HG00738.hp2 others(32): Show HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02647.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03516.hp2 HG03579.hp2 NA18747.hp1 NA18998.hp1 NA19030.hp1 NA19240.hp1 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-28+769T>G c.-28+769T>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597333
chr11:36597633	C C	A A	1	a0001c0001t0005g0026 a0001c0001t0005g0026	2	HG02818.hp1 HG02965.hp2 HG02818.hp1 HG02965.hp2	intron_variant	MODIFIER	c.-28+469G>T c.-28+469G>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597633
chr11:36597693	T T	C C	1	a0001c0001t0001g0056 a0001c0001t0001g0056	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.-28+409A>G c.-28+409A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597693
chr11:36597694	G G	A A	1	a0001c0001t0002g0057 a0001c0001t0002g0057	1	NA20905.hp2 NA20905.hp2	intron_variant	MODIFIER	c.-28+408C>T c.-28+408C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597694
chr11:36597744	G G	A A	14	a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 others(11): Show a0001c0001t0001g0025 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0016 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0006g0032 a0001c0003t0003g0008 a0002c0002t0004g0058	46	HG00438.hp1 HG00733.hp2 HG00735.hp1 others(43): Show HG00438.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01106.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02647.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03516.hp2 HG03579.hp2 NA18747.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA18998.hp1 NA19010.hp1 NA19030.hp1 NA19090.hp1 NA19240.hp1 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-28+358C>T c.-28+358C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597744
chr11:36597745	G G	T T	1	a0001c0001t0002g0035 a0001c0001t0002g0035	1	HG02135.hp2 HG02135.hp2	intron_variant	MODIFIER	c.-28+357C>A c.-28+357C>A	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597745
chr11:36597754	G G	A A	2	a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0030 a0001c0001t0003g0031	2	HG02145.hp2 HG03516.hp2 HG02145.hp2 HG03516.hp2	intron_variant	MODIFIER	c.-28+348C>T c.-28+348C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597754
chr11:36597755	T T	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA19091.hp1 NA19091.hp1	intron_variant	MODIFIER	c.-28+347A>C c.-28+347A>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597755
chr11:36597834	T T	C C	1	a0001c0001t0002g0060 a0001c0001t0002g0060	1	HG03492.hp2 HG03492.hp2	intron_variant	MODIFIER	c.-28+268A>G c.-28+268A>G	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597834
chr11:36597876	C C	G G	1	a0001c0001t0002g0034 a0001c0001t0002g0034	1	HG03688.hp2 HG03688.hp2	intron_variant	MODIFIER	c.-28+226G>C c.-28+226G>C	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597876
chr11:36597917	C C	A A	3	a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032 a0001c0001t0003g0006 a0001c0001t0003g0033 a0001c0001t0006g0032	11	HG00438.hp1 HG02523.hp1 HG03239.hp1 others(8): Show HG00438.hp1 HG02523.hp1 HG03239.hp1 NA18949.hp1 NA18955.hp2 NA18967.hp1 NA18977.hp2 NA18984.hp1 NA18995.hp1 NA19010.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-28+185G>T c.-28+185G>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597917
chr11:36597938	G G	A A	1	a0001c0001t0005g0026 a0001c0001t0005g0026	2	HG02818.hp1 HG02965.hp2 HG02818.hp1 HG02965.hp2	intron_variant	MODIFIER	c.-28+164C>T c.-28+164C>T	RAG2	ENSG00000175097.9	transcript	ENST00000311485.8	protein_coding	1/1	chr11	36597938

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JoGo Online Haplotype Explorer RAG2_chr11_36586943_36603236

JoGo Local Haplotype Explorer (on iGV) RAG2_chr11_36586943_36603236

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 8)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 60)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 8)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 12)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 60)

Haplotype Details by Sample (Haploid Level) (Total: 420)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (Exon) (Total: 5)

GGenebody Level Haplotype Variants (Intron) (Total: 61)

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Annotation (Repeats)

Annotation (SNP Array)