Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	219409
ensemblid	ENSG00000169840.5
hgncid	20374
symbol	GSX1
name	GS homeobox 1
refseq_nuc	NM_145657.3
refseq_prot	NP_663632.1
ensembl_nuc	ENST00000302945.3
ensembl_prot	ENSP00000304331.2
mane_status	MANE Select
chr	chr13
start	27792483
end	27794768
strand	+
ver	v1.2
region	chr13:27792483-27794768
region5000	chr13:27787483-27799768
regionname0	GSX1_chr13_27792483_27794768
regionname5000	GSX1_chr13_27787483_27799768

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	264	438	91	82	197	18	50	151	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0002	0/0	264	1	0	0	1	0	0	1	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0003	0/0	264	1	1	0	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	795	363	82	59	167	14	41	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
c0002	0/0	795	53	8	11	30	0	4	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
c0003	0/0	795	21	0	12	0	4	5	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
c0004	0/0	795	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
c0005	0/0	795	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
c0006	0/0	795	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	1029	429	90	78	193	18	50	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
t0002	0/0	1029	2	1	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
t0003	0/0	1029	2	0	0	2	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
t0004	0/0	1029	2	0	0	2	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
t0005	0/0	1029	2	0	2	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
t0006	0/0	1029	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
t0007	0/0	1029	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
t0008	0/0	1029	1	0	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	275	56	43	132	11	33	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
g0002	0/0	154	30	36	64	7	17	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
g0003	0/0	4	3	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
g0004	0/0	2	2	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
g0005	0/0	2	0	2	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
g0006	0/0	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
g0007	0/0	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
g0008	0/0	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	795	363	82	59	167	14	41	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0002	0/0	795	53	8	11	30	0	4	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0003	0/0	795	21	0	12	0	4	5	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0006	0/0	795	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0002c0005	0/0	795	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0003c0004	0/0	795	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1823	355	80	58	162	14	41	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0001t0002	0/0	1823	2	1	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0001t0003	0/0	1823	2	0	0	2	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0001t0004	0/0	1823	2	0	0	2	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0001t0006	0/0	1823	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0001t0007	0/0	1823	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0002t0001	0/0	1823	52	8	10	30	0	4	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0002t0008	0/0	1823	1	0	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0003t0001	0/0	1823	19	0	10	0	4	5	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0003t0005	0/0	1823	2	0	2	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0001c0006t0001	0/0	1823	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0002c0005t0001	0/0	1823	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768
a0003c0004t0001	0/0	1823	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	copy fasta	chr13	27787483	27799768

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	251	55	31	130	7	28	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0001g0002	0/0	95	20	24	31	7	13	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0001g0003	0/0	4	3	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0001g0004	0/0	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0001g0005	0/0	2	0	2	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0001g0006	0/0	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0001g0008	0/0	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0002g0002	0/0	2	1	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0003g0002	0/0	2	0	0	2	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0004g0001	0/0	2	0	0	2	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0006g0004	0/0	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0001t0007g0007	0/0	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0002t0001g0002	0/0	52	8	10	30	0	4	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0002t0008g0002	0/0	1	0	1	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0003t0001g0001	0/0	19	0	10	0	4	5	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0003t0005g0001	0/0	2	0	2	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0001c0006t0001g0002	0/0	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0002c0005t0001g0002	0/0	1	0	0	1	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
a0003c0004t0001g0001	0/0	1	1	0	0	0	0	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00140	hp1	a0001	c0001	t0001	g0002	EUR	GBR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00323	hp1	a0001	c0003	t0001	g0001	EUR	FIN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00323	hp2	a0001	c0003	t0001	g0001	EUR	FIN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00408	hp2	a0001	c0002	t0001	g0002	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00423	hp1	a0001	c0002	t0001	g0002	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00438	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00438	hp2	a0001	c0001	t0001	g0002	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00544	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00558	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00642	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00642	hp2	a0001	c0003	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00673	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00733	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00735	hp2	a0001	c0001	t0002	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00738	hp2	a0001	c0003	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01069	hp2	a0001	c0002	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01070	hp1	a0001	c0003	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01071	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01074	hp2	a0001	c0002	t0008	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01081	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01099	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01106	hp1	a0001	c0002	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01106	hp2	a0001	c0003	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01109	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01109	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01167	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01167	hp2	a0001	c0003	t0005	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01169	hp2	a0001	c0003	t0005	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01175	hp1	a0001	c0003	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01255	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01255	hp2	a0001	c0003	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01256	hp1	a0001	c0003	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01256	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01257	hp1	a0001	c0001	t0001	g0005	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01257	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01258	hp1	a0001	c0001	t0001	g0005	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01258	hp2	a0001	c0003	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01261	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01346	hp1	a0001	c0003	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01358	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01361	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01433	hp2	a0001	c0002	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01496	hp1	a0001	c0001	t0001	g0003	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01496	hp2	a0001	c0002	t0001	g0002	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01515	hp1	a0001	c0001	t0001	g0002	EUR	IBS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01516	hp1	a0001	c0001	t0001	g0002	EUR	IBS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01516	hp2	a0001	c0003	t0001	g0001	EUR	IBS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01517	hp1	a0001	c0003	t0001	g0001	EUR	IBS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01517	hp2	a0001	c0001	t0001	g0002	EUR	IBS	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01884	hp1	a0001	c0002	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01891	hp1	a0001	c0001	t0001	g0003	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01891	hp2	a0001	c0001	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01928	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01934	hp1	a0001	c0002	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01943	hp1	a0001	c0002	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01943	hp2	a0001	c0002	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01975	hp1	a0001	c0002	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01975	hp2	a0001	c0001	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01981	hp2	a0001	c0003	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01993	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02004	hp1	a0001	c0002	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02027	hp2	a0001	c0001	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02040	hp1	a0001	c0002	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02040	hp2	a0001	c0001	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02074	hp1	a0001	c0001	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02074	hp2	a0001	c0001	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02080	hp2	a0001	c0001	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02083	hp1	a0001	c0002	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02129	hp1	a0001	c0001	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02132	hp2	a0001	c0001	t0001	g0006	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02148	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02148	hp2	a0001	c0001	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02165	hp2	a0001	c0002	t0001	g0002	EAS	CDX	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02257	hp1	a0001	c0002	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02258	hp2	a0001	c0001	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02273	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02280	hp1	a0001	c0001	t0001	g0003	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02451	hp2	a0001	c0001	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02523	hp1	a0001	c0001	t0001	g0002	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02572	hp1	a0001	c0001	t0001	g0002	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02615	hp1	a0001	c0001	t0001	g0003	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02698	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02717	hp2	a0001	c0001	t0001	g0002	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02723	hp2	a0001	c0002	t0001	g0002	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02735	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02738	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02809	hp2	a0003	c0004	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02895	hp2	a0001	c0001	t0001	g0002	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02922	hp1	a0001	c0001	t0001	g0002	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02922	hp2	a0001	c0001	t0001	g0002	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02965	hp1	a0001	c0001	t0001	g0002	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03017	hp2	a0001	c0003	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03098	hp1	a0001	c0001	t0001	g0002	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03130	hp1	a0001	c0006	t0001	g0002	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03130	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03139	hp2	a0001	c0001	t0001	g0002	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03195	hp1	a0001	c0001	t0002	g0002	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03209	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03209	hp2	a0001	c0001	t0006	g0004	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03225	hp1	a0001	c0001	t0001	g0008	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03225	hp2	a0001	c0002	t0001	g0002	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03239	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03490	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03492	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03516	hp1	a0001	c0001	t0001	g0002	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03579	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03654	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03654	hp2	a0001	c0003	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03710	hp2	a0001	c0002	t0001	g0002	SAS	PJL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03834	hp2	a0001	c0003	t0001	g0001	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03927	hp1	a0001	c0002	t0001	g0002	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03927	hp2	a0001	c0001	t0001	g0002	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03942	hp1	a0001	c0003	t0001	g0001	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04184	hp1	a0001	c0001	t0001	g0002	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04184	hp2	a0001	c0002	t0001	g0002	SAS	BEB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04204	hp1	a0001	c0001	t0001	g0002	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04228	hp1	a0001	c0003	t0001	g0001	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG04228	hp2	a0001	c0001	t0001	g0002	SAS	STU	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18522	hp1	a0001	c0002	t0001	g0002	AFR	YRI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18612	hp1	a0001	c0002	t0001	g0002	EAS	CHB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18906	hp2	a0001	c0001	t0001	g0002	AFR	YRI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18939	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18939	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18943	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18947	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18950	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18951	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18956	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18957	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18959	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18962	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18964	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18967	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18971	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18973	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18975	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18976	hp1	a0001	c0001	t0007	g0007	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18976	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18979	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18982	hp1	a0001	c0001	t0003	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18983	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18991	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18995	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18997	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18997	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18998	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19000	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19003	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19004	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19007	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19007	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19010	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19011	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19012	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19030	hp1	a0001	c0001	t0001	g0002	AFR	LWK	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19030	hp2	a0001	c0002	t0001	g0002	AFR	LWK	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19043	hp2	a0001	c0001	t0001	g0001	AFR	LWK	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19054	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19057	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19058	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19063	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19063	hp2	a0002	c0005	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19064	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19065	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19067	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19074	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19075	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19075	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19077	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19079	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19080	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19082	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19084	hp1	a0001	c0001	t0003	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19085	hp2	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19087	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19090	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19091	hp1	a0001	c0002	t0001	g0002	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19240	hp1	a0001	c0001	t0001	g0002	AFR	YRI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20129	hp1	a0001	c0001	t0001	g0002	AFR	ASW	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20752	hp2	a0001	c0001	t0001	g0002	EUR	TSI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20905	hp2	a0001	c0002	t0001	g0002	SAS	GIH	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02109	hp1	a0001	c0001	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02109	hp2	a0001	c0002	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02486	hp2	a0001	c0001	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02559	hp1	a0001	c0001	t0001	g0002	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG02559	hp2	a0001	c0001	t0001	g0004	AFR	ACB	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03471	hp1	a0001	c0002	t0001	g0002	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA20300	hp2	a0001	c0001	t0001	g0002	AFR	USA	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	GSX1_chr13_27787483_27799768	GSX1	chr13	27787483	27799768

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr13:27792966	C C	A A	1	a0003 a0003	1	HG02809.hp2 HG02809.hp2	missense_variant	MODERATE	c.276C>A c.276C>A	p.His92Gln p.His92Gln	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/2	484/1823	276/795	92/264			chr13	27792966
chr13:27793853	C C	A A	1	a0002 a0002	1	NA19063.hp2 NA19063.hp2	missense_variant	MODERATE	c.700C>A c.700C>A	p.Leu234Ile p.Leu234Ile	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	908/1823	700/795	234/264			chr13	27793853

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr13:27792924	A A	G G	5	a0001c0001 a0001c0002 a0001c0006 others(2): Show a0001c0001 a0001c0002 a0001c0006 a0002c0005 a0003c0004	419	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(416): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18976.hp1 NA18976.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	synonymous_variant	LOW	c.234A>G c.234A>G	p.Leu78Leu p.Leu78Leu	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/2	442/1823	234/795	78/264	chr13	27792924
chr13:27793002	C C	T T	1	a0001c0006 a0001c0006	1	HG03130.hp1 HG03130.hp1	synonymous_variant	LOW	c.312C>T c.312C>T	p.Pro104Pro p.Pro104Pro	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/2	520/1823	312/795	104/264	chr13	27793002
chr13:27793693	C C	T T	1	a0001c0006 a0001c0006	1	HG03130.hp1 HG03130.hp1	synonymous_variant	LOW	c.540C>T c.540C>T	p.Ile180Ile p.Ile180Ile	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	748/1823	540/795	180/264	chr13	27793693
chr13:27793819	C C	T T	2	a0001c0002 a0002c0005 a0001c0002 a0002c0005	54	HG00408.hp2 HG00423.hp1 HG01069.hp2 others(51): Show HG00408.hp2 HG00423.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01106.hp1 HG01433.hp2 HG01496.hp2 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG02004.hp1 HG02040.hp1 HG02083.hp1 HG02109.hp2 HG02165.hp2 HG02257.hp1 HG02723.hp2 HG03225.hp2 HG03471.hp1 HG03710.hp2 HG03927.hp1 HG04184.hp2 NA18522.hp1 NA18612.hp1 NA18939.hp2 NA18943.hp2 NA18947.hp1 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18964.hp1 NA18967.hp2 NA18983.hp2 NA18995.hp2 NA18998.hp1 NA19004.hp2 NA19007.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp2 NA19057.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp2 NA19074.hp2 NA19075.hp1 NA19080.hp1 NA19082.hp2 NA19085.hp2 NA19091.hp1 NA20905.hp2	synonymous_variant	LOW	c.666C>T c.666C>T	p.Gly222Gly p.Gly222Gly	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	874/1823	666/795	222/264	chr13	27793819

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr13:27792683	C C	T T	1	a0001c0003t0005 a0001c0003t0005	2	HG01167.hp2 HG01169.hp2 HG01167.hp2 HG01169.hp2	5_prime_UTR_variant	MODIFIER	c.-8C>T c.-8C>T	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/2	8	chr13	27792683
chr13:27792685	G G	A A	1	a0001c0001t0006 a0001c0001t0006	1	HG03209.hp2 HG03209.hp2	5_prime_UTR_variant	MODIFIER	c.-6G>A c.-6G>A	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/2	6	chr13	27792685
chr13:27794055	G G	C C	1	a0001c0001t0007 a0001c0001t0007	1	NA18976.hp1 NA18976.hp1	3_prime_UTR_variant	MODIFIER	c.107G>C c.107G>C	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	107	chr13	27794055
chr13:27794056	C C	G G	1	a0001c0001t0007 a0001c0001t0007	1	NA18976.hp1 NA18976.hp1	3_prime_UTR_variant	MODIFIER	c.108C>G c.108C>G	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	108	chr13	27794056
chr13:27794073	T T	C C	1	a0001c0001t0002 a0001c0001t0002	2	HG00735.hp2 HG03195.hp1 HG00735.hp2 HG03195.hp1	3_prime_UTR_variant	MODIFIER	c.125T>C c.125T>C	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	125	chr13	27794073
chr13:27794275	C C	T T	1	a0001c0001t0007 a0001c0001t0007	1	NA18976.hp1 NA18976.hp1	3_prime_UTR_variant	MODIFIER	c.327C>T c.327C>T	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	327	chr13	27794275
chr13:27794277	T T	C C	1	a0001c0001t0007 a0001c0001t0007	1	NA18976.hp1 NA18976.hp1	3_prime_UTR_variant	MODIFIER	c.329T>C c.329T>C	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	329	chr13	27794277
chr13:27794383	A A	C C	1	a0001c0002t0008 a0001c0002t0008	1	HG01074.hp2 HG01074.hp2	3_prime_UTR_variant	MODIFIER	c.435A>C c.435A>C	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	435	chr13	27794383
chr13:27794388	T T	A A	1	a0001c0001t0003 a0001c0001t0003	2	NA18982.hp1 NA19084.hp1 NA18982.hp1 NA19084.hp1	3_prime_UTR_variant	MODIFIER	c.440T>A c.440T>A	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	440	chr13	27794388
chr13:27794446	A A	G G	1	a0001c0001t0004 a0001c0001t0004	2	NA18973.hp1 NA19090.hp1 NA18973.hp1 NA19090.hp1	3_prime_UTR_variant	MODIFIER	c.498A>G c.498A>G	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	2/2	498	chr13	27794446

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr13:27793117	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.412+15C>T c.412+15C>T	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/1	chr13	27793117
chr13:27793138	G G	C C	11	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0001t0006g0004 a0001c0002t0001g0002 a0001c0002t0008g0002 a0001c0006t0001g0002 a0002c0005t0001g0002	161	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(158): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01993.hp1 HG02004.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp2 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03654.hp1 HG03688.hp1 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp2 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18943.hp2 NA18947.hp1 NA18950.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp1 NA18959.hp2 NA18962.hp1 NA18964.hp1 NA18967.hp2 NA18971.hp2 NA18975.hp1 NA18979.hp1 NA18982.hp1 NA18983.hp2 NA18995.hp2 NA18997.hp2 NA18998.hp1 NA19000.hp2 NA19003.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19057.hp1 NA19058.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19067.hp2 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA20905.hp2	intron_variant	MODIFIER	c.412+36G>C c.412+36G>C	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/1	chr13	27793138
chr13:27793216	C C	T T	1	a0001c0001t0001g0005 a0001c0001t0001g0005	2	HG01257.hp1 HG01258.hp1 HG01257.hp1 HG01258.hp1	intron_variant	MODIFIER	c.412+114C>T c.412+114C>T	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/1	chr13	27793216
chr13:27793232	C C	G G	1	a0001c0001t0007g0007 a0001c0001t0007g0007	1	NA18976.hp1 NA18976.hp1	intron_variant	MODIFIER	c.412+130C>G c.412+130C>G	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/1	chr13	27793232
chr13:27793359	G G	A A	1	a0001c0001t0001g0003 a0001c0001t0001g0003	4	HG01496.hp1 HG01891.hp1 HG02280.hp1 others(1): Show HG01496.hp1 HG01891.hp1 HG02280.hp1 HG02615.hp1	intron_variant	MODIFIER	c.413-207G>A c.413-207G>A	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/1	chr13	27793359
chr13:27793379	T T	A A	1	a0001c0001t0001g0006 a0001c0001t0001g0006	1	HG02132.hp2 HG02132.hp2	intron_variant	MODIFIER	c.413-187T>A c.413-187T>A	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/1	chr13	27793379
chr13:27793492	G G	T T	2	a0001c0001t0001g0004 a0001c0001t0006g0004 a0001c0001t0001g0004 a0001c0001t0006g0004	2	HG02559.hp2 HG03209.hp2 HG02559.hp2 HG03209.hp2	intron_variant	MODIFIER	c.413-74G>T c.413-74G>T	GSX1	ENSG00000169840.5	transcript	ENST00000302945.3	protein_coding	1/1	chr13	27793492

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JoGo Online Haplotype Explorer GSX1_chr13_27787483_27799768

JoGo Local Haplotype Explorer (on iGV) GSX1_chr13_27787483_27799768

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 6)

TTranscript Level Haplotype Info (Total: 8)

GGenebody Level Haplotype Info (Total: 8)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 6)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 13)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 19)

Haplotype Details by Sample (Haploid Level) (Total: 440)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 2)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (Exon) (Total: 10)

GGenebody Level Haplotype Variants (Intron) (Total: 7)

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Annotation (Repeats)

Annotation (SNP Array)