Joint Open Genome and Omics Platform (JoGo)

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geneid	100506164
ensemblid	ENSG00000171116.7
hgncid	29603
symbol	HSFX1
name	heat shock transcription factor family, X-linked 1
refseq_nuc	NM_016153.3
refseq_prot	NP_057237.1
ensembl_nuc	ENST00000370416.4
ensembl_prot	ENSP00000359444.4
mane_status	MANE Select
chr	chrX
start	149774068
end	149776867
strand	+
ver	v1.2
region	chrX:149774068-149776867
region5000	chrX:149769068-149781867
regionname0	HSFX1_chrX_149774068_149776867
regionname5000	HSFX1_chrX_149769068_149781867

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	423	190	44	37	77	4	28	59	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0002	0/0	423	48	7	11	21	6	3	13	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0003	0/0	423	2	0	0	2	0	0	2	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0004	0/0	115	1	0	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0005	0/0	423	1	0	0	1	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0006	0/0	280	1	0	0	1	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0007	0/0	423	1	1	0	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0008	0/0	423	1	1	0	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0009	0/0	423	1	0	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0010	0/0	423	1	0	0	1	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0011	0/0	423	1	0	0	1	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0012	0/0	423	1	0	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0013	0/0	423	1	1	0	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0014	0/0	423	1	1	0	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0015	0/0	82	1	0	0	1	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0016	0/0	423	1	1	0	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	1272	102	18	19	47	2	16	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0002	0/0	1272	88	26	18	30	2	12	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0003	0/0	1272	48	7	11	21	6	3	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0004	0/0	1272	2	0	0	2	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0005	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0006	0/0	1286	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0007	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0008	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0009	0/0	1272	1	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0010	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0011	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0012	0/0	1272	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0013	0/0	1272	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0014	0/0	1272	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0015	0/0	1272	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0016	0/0	1273	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
c0017	0/0	1274	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	692	246	54	47	102	10	33	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
t0002	0/0	692	4	1	0	3	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
t0003	0/0	692	2	0	1	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
t0004	0/0	692	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	218	55	42	89	8	24	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0002	0/0	26	0	3	13	2	8	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0003	0/0	2	0	2	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0004	0/0	2	1	1	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0005	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0006	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0007	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0008	0/0	1	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
g0009	0/0	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	1272	102	18	19	47	2	16	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0001c0002	0/0	1272	88	26	18	30	2	12	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0002c0003	0/0	1272	48	7	11	21	6	3	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0003c0004	0/0	1272	2	0	0	2	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0004c0006	0/0	1286	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0005c0015	0/0	1272	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0006c0016	0/0	1273	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0007c0010	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0008c0007	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0009c0014	0/0	1272	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0010c0013	0/0	1272	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0011c0012	0/0	1272	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0012c0009	0/0	1272	1	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0013c0008	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0014c0011	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0015c0017	0/0	1274	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0016c0005	0/0	1272	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1963	101	17	19	47	2	16	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0001c0001t0004	0/0	1963	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0001c0002t0001	0/0	1963	85	26	18	27	2	12	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0001c0002t0002	0/0	1963	3	0	0	3	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0002c0003t0001	0/0	1963	46	7	10	21	5	3	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0002c0003t0003	0/0	1963	2	0	1	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0003c0004t0001	0/0	1963	2	0	0	2	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0004c0006t0001	0/0	1977	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0005c0015t0001	0/0	1963	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0006c0016t0001	0/0	1964	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0007c0010t0002	0/0	1963	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0008c0007t0001	0/0	1963	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0009c0014t0001	0/0	1963	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0010c0013t0001	0/0	1963	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0011c0012t0001	0/0	1963	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0012c0009t0001	0/0	1963	1	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0013c0008t0001	0/0	1963	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0014c0011t0001	0/0	1963	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0015c0017t0001	0/0	1965	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867
a0016c0005t0001	0/0	1963	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	copy fasta	chrX	149769068	149781867

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	94	16	16	44	2	16	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0001t0001g0002	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0001t0001g0003	0/0	2	0	2	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0001t0001g0004	0/0	2	1	1	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0001t0001g0006	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0001t0001g0007	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0001t0004g0001	0/0	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0002t0001g0001	0/0	60	26	15	15	0	4	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0002t0001g0002	0/0	25	0	3	12	2	8	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0001c0002t0002g0001	0/0	3	0	0	3	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0002c0003t0001g0001	0/0	45	7	10	21	4	3	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0002c0003t0001g0008	0/0	1	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0002c0003t0003g0001	0/0	2	0	1	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0003c0004t0001g0001	0/0	2	0	0	2	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0004c0006t0001g0009	0/0	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0005c0015t0001g0001	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0006c0016t0001g0001	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0007c0010t0002g0001	0/0	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0008c0007t0001g0001	0/0	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0009c0014t0001g0001	0/0	1	0	0	0	0	1	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0010c0013t0001g0001	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0011c0012t0001g0001	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0012c0009t0001g0001	0/0	1	0	0	0	1	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0013c0008t0001g0001	0/0	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0014c0011t0001g0001	0/0	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0015c0017t0001g0005	0/0	1	0	0	1	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
a0016c0005t0001g0001	0/0	1	1	0	0	0	0	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0002	c0003	t0001	g0001	EUR	GBR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00099	hp2	a0012	c0009	t0001	g0001	EUR	GBR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00280	hp1	a0002	c0003	t0001	g0008	EUR	FIN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00323	hp2	a0001	c0002	t0001	g0002	EUR	FIN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00408	hp2	a0011	c0012	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00438	hp1	a0001	c0002	t0001	g0002	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00597	hp2	a0002	c0003	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00609	hp1	a0002	c0003	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00642	hp1	a0002	c0003	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00673	hp1	a0002	c0003	t0001	g0001	EAS	CHS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00738	hp1	a0002	c0003	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00741	hp1	a0002	c0003	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG00741	hp2	a0002	c0003	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01070	hp1	a0002	c0003	t0003	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01070	hp2	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01071	hp1	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01074	hp1	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01099	hp1	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01106	hp1	a0001	c0002	t0001	g0002	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01109	hp1	a0002	c0003	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01167	hp1	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01175	hp1	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01192	hp1	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01243	hp1	a0001	c0002	t0001	g0001	AMR	PUR	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01255	hp1	a0002	c0003	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01346	hp2	a0001	c0002	t0001	g0002	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01358	hp1	a0002	c0003	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01361	hp2	a0002	c0003	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01496	hp1	a0002	c0003	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01496	hp2	a0001	c0002	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01515	hp1	a0002	c0003	t0001	g0001	EUR	IBS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01517	hp1	a0002	c0003	t0001	g0001	EUR	IBS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01517	hp2	a0002	c0003	t0003	g0001	EUR	IBS	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01884	hp1	a0001	c0002	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01928	hp1	a0001	c0002	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01975	hp1	a0001	c0001	t0001	g0003	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01978	hp1	a0002	c0003	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01978	hp2	a0001	c0002	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01981	hp1	a0001	c0002	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01981	hp2	a0001	c0002	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02004	hp1	a0001	c0002	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02027	hp1	a0002	c0003	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02040	hp1	a0010	c0013	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02056	hp1	a0002	c0003	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02071	hp1	a0001	c0002	t0001	g0002	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02074	hp1	a0002	c0003	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02080	hp2	a0002	c0003	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02132	hp1	a0001	c0002	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02135	hp1	a0001	c0002	t0001	g0002	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02148	hp1	a0001	c0001	t0001	g0003	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02148	hp2	a0001	c0002	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02155	hp1	a0001	c0001	t0001	g0006	EAS	CDX	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02165	hp1	a0002	c0003	t0001	g0001	EAS	CDX	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02165	hp2	a0001	c0002	t0001	g0001	EAS	CDX	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02257	hp1	a0002	c0003	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02257	hp2	a0001	c0001	t0001	g0004	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02258	hp1	a0001	c0002	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02273	hp2	a0001	c0001	t0001	g0004	AMR	PEL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02280	hp1	a0001	c0002	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02280	hp2	a0016	c0005	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02451	hp1	a0001	c0002	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02451	hp2	a0001	c0002	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02523	hp1	a0001	c0002	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02523	hp2	a0005	c0015	t0001	g0001	EAS	KHV	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02572	hp1	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02602	hp1	a0001	c0002	t0001	g0002	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02615	hp2	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02622	hp1	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02622	hp2	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02630	hp1	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02630	hp2	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02683	hp1	a0009	c0014	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02683	hp2	a0004	c0006	t0001	g0009	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02738	hp1	a0001	c0002	t0001	g0002	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02818	hp1	a0002	c0003	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02818	hp2	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02896	hp1	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02896	hp2	a0007	c0010	t0002	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02922	hp1	a0002	c0003	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02922	hp2	a0001	c0002	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02970	hp1	a0001	c0002	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02976	hp2	a0001	c0002	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03130	hp1	a0001	c0002	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03139	hp1	a0001	c0002	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03209	hp1	a0001	c0002	t0001	g0001	AFR	MSL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03225	hp1	a0013	c0008	t0001	g0001	AFR	MSL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03239	hp1	a0001	c0002	t0001	g0002	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03239	hp2	a0001	c0002	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03453	hp2	a0001	c0002	t0001	g0001	AFR	MSL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03490	hp1	a0001	c0002	t0001	g0002	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03491	hp1	a0002	c0003	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03491	hp2	a0001	c0002	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03516	hp1	a0002	c0003	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03516	hp2	a0001	c0002	t0001	g0001	AFR	ESN	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03540	hp2	a0001	c0002	t0001	g0001	AFR	GWD	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03704	hp1	a0001	c0002	t0001	g0002	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03710	hp1	a0001	c0002	t0001	g0002	SAS	PJL	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03927	hp1	a0001	c0002	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03927	hp2	a0001	c0002	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG04115	hp1	a0002	c0003	t0001	g0001	SAS	STU	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG04184	hp1	a0001	c0002	t0001	g0002	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG04204	hp1	a0001	c0002	t0001	g0002	SAS	STU	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18747	hp1	a0001	c0002	t0001	g0001	EAS	CHB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18906	hp2	a0001	c0002	t0001	g0001	AFR	YRI	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18939	hp2	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18942	hp2	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18945	hp1	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18946	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18946	hp2	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18947	hp2	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18949	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18949	hp2	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18960	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18961	hp1	a0006	c0016	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18964	hp1	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18966	hp1	a0015	c0017	t0001	g0005	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18967	hp1	a0001	c0001	t0001	g0007	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18968	hp2	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18971	hp1	a0001	c0001	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18974	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18977	hp1	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18984	hp1	a0003	c0004	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18990	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18991	hp2	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA18999	hp2	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19000	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19002	hp1	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19002	hp2	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19004	hp1	a0001	c0002	t0002	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19011	hp1	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19011	hp2	a0001	c0002	t0002	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19012	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19043	hp1	a0002	c0003	t0001	g0001	AFR	LWK	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19055	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19056	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19057	hp2	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19058	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19063	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19066	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19081	hp1	a0001	c0002	t0001	g0002	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19081	hp2	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19084	hp1	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19084	hp2	a0002	c0003	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19086	hp1	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19087	hp2	a0001	c0002	t0002	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19089	hp1	a0001	c0002	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA19090	hp2	a0003	c0004	t0001	g0001	EAS	JPT	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA20129	hp1	a0001	c0002	t0001	g0001	AFR	ASW	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA20129	hp2	a0008	c0007	t0001	g0001	AFR	ASW	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA20752	hp1	a0002	c0003	t0001	g0001	EUR	TSI	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA20805	hp1	a0001	c0002	t0001	g0002	EUR	TSI	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA20905	hp1	a0002	c0003	t0001	g0001	SAS	GIH	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG01123	hp2	a0001	c0002	t0001	g0002	AMR	CLM	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02109	hp1	a0002	c0003	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02109	hp2	a0001	c0002	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02486	hp1	a0014	c0011	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02559	hp1	a0002	c0003	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
HG06807	hp2	a0001	c0001	t0004	g0001	AFR	USA	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA20300	hp1	a0001	c0002	t0001	g0001	AFR	USA	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	HSFX1_chrX_149769068_149781867	HSFX1	chrX	149769068	149781867

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:149774895	G G	A A	1	a0016 a0016	1	HG02280.hp2 HG02280.hp2	missense_variant	MODERATE	c.214G>A c.214G>A	p.Ala72Thr p.Ala72Thr	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	828/1963	214/1272	72/423		chrX	149774895
chrX:149774921	G G	GC GC	1	a0015 a0015	1	NA18966.hp1 NA18966.hp1	frameshift_variant	HIGH	c.241dupC c.241dupC	p.His81fs p.His81fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	856/1963	242/1272	81/423	INFO_REALIGN_3_PRIME	chrX	149774921
chrX:149775020	G G	GTCCATCT others(10): Show GTCCATCTGAGTTTTCGT	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant&stop_gained	HIGH	c.347_348insAGTTTTCG others(9): Show c.347_348insAGTTTTCGTTCCATCTG	p.Trp116fs p.Trp116fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	962/1963	348/1272	116/423	INFO_REALIGN_3_PRIME	chrX	149775020
chrX:149775035	T T	TG TG	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant	HIGH	c.355dupG c.355dupG	p.Asp119fs p.Asp119fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	970/1963	356/1272	119/423	INFO_REALIGN_3_PRIME	chrX	149775035
chrX:149775093	AG AG	A A	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant	HIGH	c.415delG c.415delG	p.Asp139fs p.Asp139fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	1029/1963	415/1272	139/423	INFO_REALIGN_3_PRIME	chrX	149775093
chrX:149775127	C C	T T	3	a0002 a0005 a0006 a0002 a0005 a0006	50	HG00099.hp1 HG00280.hp1 HG00597.hp2 others(47): Show HG00099.hp1 HG00280.hp1 HG00597.hp2 HG00609.hp1 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01109.hp1 HG01255.hp1 HG01358.hp1 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01517.hp2 HG01978.hp1 HG02027.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp2 HG02109.hp1 HG02165.hp1 HG02257.hp1 HG02523.hp2 HG02559.hp1 HG02818.hp1 HG02922.hp1 HG03491.hp1 HG03516.hp1 HG04115.hp1 NA18939.hp2 NA18942.hp2 NA18946.hp2 NA18949.hp1 NA18960.hp1 NA18961.hp1 NA18974.hp1 NA18990.hp1 NA19000.hp1 NA19043.hp1 NA19055.hp1 NA19057.hp2 NA19063.hp1 NA19084.hp1 NA19084.hp2 NA20752.hp1 NA20905.hp1	missense_variant	MODERATE	c.446C>T c.446C>T	p.Ser149Leu p.Ser149Leu	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	1060/1963	446/1272	149/423		chrX	149775127
chrX:149775144	C C	T T	1	a0007 a0007	1	HG02896.hp2 HG02896.hp2	missense_variant	MODERATE	c.463C>T c.463C>T	p.Arg155Cys p.Arg155Cys	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	1077/1963	463/1272	155/423		chrX	149775144
chrX:149775175	G G	C C	1	a0008 a0008	1	NA20129.hp2 NA20129.hp2	missense_variant	MODERATE	c.494G>C c.494G>C	p.Arg165Pro p.Arg165Pro	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	1108/1963	494/1272	165/423		chrX	149775175
chrX:149775216	G G	A A	1	a0014 a0014	1	HG02486.hp1 HG02486.hp1	missense_variant	MODERATE	c.535G>A c.535G>A	p.Ala179Thr p.Ala179Thr	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	1149/1963	535/1272	179/423		chrX	149775216
chrX:149776142	GA GA	G G	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant	HIGH	c.626delA c.626delA	p.Lys209fs p.Lys209fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1240/1963	626/1272	209/423	INFO_REALIGN_3_PRIME	chrX	149776142
chrX:149776218	G G	C C	1	a0013 a0013	1	HG03225.hp1 HG03225.hp1	missense_variant	MODERATE	c.700G>C c.700G>C	p.Ala234Pro p.Ala234Pro	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1314/1963	700/1272	234/423		chrX	149776218
chrX:149776249	C C	T T	1	a0009 a0009	1	HG02683.hp1 HG02683.hp1	missense_variant	MODERATE	c.731C>T c.731C>T	p.Thr244Met p.Thr244Met	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1345/1963	731/1272	244/423		chrX	149776249
chrX:149776278	C C	T T	1	a0012 a0012	1	HG00099.hp2 HG00099.hp2	missense_variant	MODERATE	c.760C>T c.760C>T	p.Pro254Ser p.Pro254Ser	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1374/1963	760/1272	254/423		chrX	149776278
chrX:149776292	AC AC	A A	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant	HIGH	c.776delC c.776delC	p.Pro259fs p.Pro259fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1390/1963	776/1272	259/423	INFO_REALIGN_3_PRIME	chrX	149776292
chrX:149776301	T T	TC TC	1	a0006 a0006	1	NA18961.hp1 NA18961.hp1	frameshift_variant	HIGH	c.786dupC c.786dupC	p.Asn263fs p.Asn263fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1401/1963	787/1272	263/423	INFO_REALIGN_3_PRIME	chrX	149776301
chrX:149776365	G G	A A	1	a0005 a0005	1	HG02523.hp2 HG02523.hp2	missense_variant	MODERATE	c.847G>A c.847G>A	p.Ala283Thr p.Ala283Thr	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1461/1963	847/1272	283/423		chrX	149776365
chrX:149776372	C C	T T	1	a0003 a0003	2	NA18984.hp1 NA19090.hp2 NA18984.hp1 NA19090.hp2	missense_variant	MODERATE	c.854C>T c.854C>T	p.Ala285Val p.Ala285Val	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1468/1963	854/1272	285/423		chrX	149776372
chrX:149776439	T T	TC TC	1	a0015 a0015	1	NA18966.hp1 NA18966.hp1	frameshift_variant	HIGH	c.923dupC c.923dupC	p.Val309fs p.Val309fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1538/1963	924/1272	308/423	INFO_REALIGN_3_PRIME	chrX	149776439
chrX:149776441	C C	T T	1	a0010 a0010	1	HG02040.hp1 HG02040.hp1	missense_variant	MODERATE	c.923C>T c.923C>T	p.Pro308Leu p.Pro308Leu	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1537/1963	923/1272	308/423		chrX	149776441
chrX:149776457	TG TG	T T	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant	HIGH	c.942delG c.942delG	p.Pro315fs p.Pro315fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1556/1963	942/1272	314/423	INFO_REALIGN_3_PRIME	chrX	149776457
chrX:149776545	TC TC	T T	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant	HIGH	c.1030delC c.1030delC	p.Arg344fs p.Arg344fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1644/1963	1030/1272	344/423	INFO_REALIGN_3_PRIME	chrX	149776545
chrX:149776659	G G	GC GC	1	a0004 a0004	1	HG02683.hp2 HG02683.hp2	frameshift_variant	HIGH	c.1143dupC c.1143dupC	p.Ser382fs p.Ser382fs	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1758/1963	1144/1272	382/423	INFO_REALIGN_3_PRIME	chrX	149776659
chrX:149776746	G G	A A	1	a0011 a0011	1	HG00408.hp2 HG00408.hp2	missense_variant	MODERATE	c.1228G>A c.1228G>A	p.Asp410Asn p.Asp410Asn	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	2/2	1842/1963	1228/1272	410/423		chrX	149776746

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:149774735	A A	G G	9	a0001c0001 a0002c0003 a0005c0015 others(6): Show a0001c0001 a0002c0003 a0005c0015 a0006c0016 a0009c0014 a0010c0013 a0011c0012 a0014c0011 a0015c0017	157	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(154): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG02004.hp2 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02145.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02683.hp1 HG02698.hp1 HG02735.hp1 HG02818.hp1 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03453.hp1 HG03491.hp1 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18946.hp2 NA18947.hp1 NA18949.hp1 NA18952.hp1 NA18953.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18983.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18991.hp1 NA18999.hp1 NA19000.hp1 NA19005.hp1 NA19007.hp1 NA19043.hp1 NA19055.hp1 NA19057.hp1 NA19057.hp2 NA19063.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1	synonymous_variant	LOW	c.54A>G c.54A>G	p.Arg18Arg p.Arg18Arg	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	668/1963	54/1272	18/423			chrX	149774735

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:149774097	G G	A A	2	a0001c0002t0002 a0007c0010t0002 a0001c0002t0002 a0007c0010t0002	4	HG02896.hp2 NA19004.hp1 NA19011.hp2 others(1): Show HG02896.hp2 NA19004.hp1 NA19011.hp2 NA19087.hp2	5_prime_UTR_variant	MODIFIER	c.-585G>A c.-585G>A	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	585	chrX	149774097
chrX:149774182	T T	C C	1	a0001c0001t0004 a0001c0001t0004	1	HG06807.hp2 HG06807.hp2	5_prime_UTR_variant	MODIFIER	c.-500T>C c.-500T>C	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	500	chrX	149774182
chrX:149774280	C C	T T	1	a0002c0003t0003 a0002c0003t0003	2	HG01070.hp1 HG01517.hp2 HG01070.hp1 HG01517.hp2	5_prime_UTR_variant	MODIFIER	c.-402C>T c.-402C>T	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/2	402	chrX	149774280

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:149775260	GC GC	G G	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.564+17delC c.564+17delC	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775260
chrX:149775271	G G	C C	2	a0001c0001t0001g0002 a0001c0002t0001g0002 a0001c0001t0001g0002 a0001c0002t0001g0002	26	HG00323.hp2 HG00438.hp1 HG01106.hp1 others(23): Show HG00323.hp2 HG00438.hp1 HG01106.hp1 HG01123.hp2 HG01346.hp2 HG02071.hp1 HG02135.hp1 HG02602.hp1 HG02738.hp1 HG03239.hp1 HG03490.hp1 HG03704.hp1 HG03710.hp1 HG04184.hp1 HG04204.hp1 NA18946.hp1 NA18947.hp2 NA18971.hp1 NA18999.hp2 NA19002.hp2 NA19012.hp1 NA19056.hp1 NA19058.hp1 NA19066.hp1 NA19081.hp1 NA20805.hp1	intron_variant	MODIFIER	c.564+26G>C c.564+26G>C	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775271
chrX:149775282	T T	C C	1	a0001c0001t0001g0003 a0001c0001t0001g0003	2	HG01975.hp1 HG02148.hp1 HG01975.hp1 HG02148.hp1	intron_variant	MODIFIER	c.564+37T>C c.564+37T>C	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775282
chrX:149775326	TG TG	T T	1	a0015c0017t0001g0005 a0015c0017t0001g0005	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.564+84delG c.564+84delG	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775326
chrX:149775359	C C	CCATCGCT others(2): Show CCATCGCTGT	1	a0001c0001t0001g0006 a0001c0001t0001g0006	1	HG02155.hp1 HG02155.hp1	intron_variant	MODIFIER	c.564+115_564+123dup others(9): Show c.564+115_564+123dupCATCGCTGT	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775359
chrX:149775418	T T	TG TG	1	a0015c0017t0001g0005 a0015c0017t0001g0005	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.564+177dupG c.564+177dupG	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775418
chrX:149775612	AC AC	A A	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.564+370delC c.564+370delC	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775612
chrX:149775626	CT CT	C C	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.564+382delT c.564+382delT	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775626
chrX:149775649	C C	T T	1	a0002c0003t0001g0008 a0002c0003t0001g0008	1	HG00280.hp1 HG00280.hp1	intron_variant	MODIFIER	c.564+404C>T c.564+404C>T	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775649
chrX:149775660	G G	A A	1	a0001c0001t0001g0007 a0001c0001t0001g0007	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.564+415G>A c.564+415G>A	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775660
chrX:149775723	GC GC	G G	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.565-358delC c.565-358delC	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775723
chrX:149775781	AT AT	A A	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.565-301delT c.565-301delT	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775781
chrX:149775782	TG TG	T T	1	a0015c0017t0001g0005 a0015c0017t0001g0005	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.565-296delG c.565-296delG	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775782
chrX:149775795	GA GA	G G	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.565-286delA c.565-286delA	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775795
chrX:149775814	T T	G G	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.565-269T>G c.565-269T>G	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775814
chrX:149775866	T T	TG TG	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.565-217_565-216ins others(1): Show c.565-217_565-216insG	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775866
chrX:149775867	T T	G G	1	a0001c0001t0001g0004 a0001c0001t0001g0004	2	HG02257.hp2 HG02273.hp2 HG02257.hp2 HG02273.hp2	intron_variant	MODIFIER	c.565-216T>G c.565-216T>G	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1		chrX	149775867
chrX:149775900	CA CA	C C	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.565-181delA c.565-181delA	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775900
chrX:149775947	TG TG	T T	1	a0004c0006t0001g0009 a0004c0006t0001g0009	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.565-132delG c.565-132delG	HSFX1	ENSG00000171116.7	transcript	ENST00000370416.4	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	149775947

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JoGo Local Haplotype Explorer (on iGV) HSFX1_chrX_149769068_149781867

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 16)

CCoding Level Haplotype Info (Total: 17)

TTranscript Level Haplotype Info (Total: 4)

GGenebody Level Haplotype Info (Total: 9)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 17)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 20)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 27)

Haplotype Details by Sample (Haploid Level) (Total: 253)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 23)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (Exon) (Total: 3)

GGenebody Level Haplotype Variants (Intron) (Total: 19)

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Annotation (Repeats)

Annotation (SNP Array)