Joint Open Genome and Omics Platform (JoGo)

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Item	Value
geneid	7547
ensemblid	ENSG00000156925.12
hgncid	12874
symbol	ZIC3
name	Zic family member 3
refseq_nuc	NM_003413.4
refseq_prot	NP_003404.1
ensembl_nuc	ENST00000287538.10
ensembl_prot	ENSP00000287538.5
mane_status	MANE Select
chr	chrX
start	137566127
end	137572102
strand	+
ver	v1.2
region	chrX:137566127-137572102
region5000	chrX:137561127-137577102
regionname0	ZIC3_chrX_137566127_137572102
regionname5000	ZIC3_chrX_137561127_137577102

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	467	299	69	60	127	9	32	92	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0002	0/0	467	2	0	0	0	0	2	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0003	0/0	467	1	1	0	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0004	0/0	469	1	0	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0005	0/0	460	1	0	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0006	0/0	467	1	0	0	1	0	0	1	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0007	0/0	467	1	0	0	1	0	0	1	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1404	289	62	60	124	9	32	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0002	0/0	1404	3	3	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0003	0/0	1404	2	0	0	0	0	2	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0004	0/0	1404	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0005	0/0	1410	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0006	0/0	1404	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0007	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0008	0/0	1404	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0009	0/0	1405	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0010	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0011	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0012	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0013	0/0	1404	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
c0014	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	2598	298	67	60	125	11	33	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
t0002	0/0	2598	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
t0003	0/0	2599	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
t0004	0/0	2594	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
t0005	0/0	2597	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
t0006	0/0	2595	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
t0007	0/0	2597	1	0	0	0	0	1	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
t0008	0/0	2597	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	45	13	9	18	2	3	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0002	0/0	42	4	11	18	2	7	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0003	0/0	24	0	5	18	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0004	0/0	23	9	5	5	2	2	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0005	0/0	20	3	4	8	1	4	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0006	1/0	17	3	4	8	1	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0007	0/0	14	8	2	2	0	2	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0008	0/0	12	1	4	5	0	2	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0009	0/0	10	1	2	0	2	5	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0010	0/1	8	3	0	3	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0011	0/0	8	0	1	7	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0012	0/0	7	3	2	1	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0013	0/0	7	0	0	6	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0014	0/0	7	1	1	4	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0015	0/0	7	6	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0016	0/0	6	3	2	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0017	0/0	5	1	0	4	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0018	0/0	4	1	0	2	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0019	0/0	4	0	1	3	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0020	0/0	3	2	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0021	0/0	2	0	2	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0022	0/0	2	0	0	2	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0023	0/0	2	1	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0024	0/0	2	0	0	1	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0025	0/0	2	0	0	1	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0026	0/0	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0027	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0028	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0029	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0030	0/0	1	0	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0031	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0032	0/0	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0033	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0034	0/0	1	0	0	0	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0035	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0036	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0037	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0038	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0039	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0040	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0041	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0042	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0043	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0044	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0045	0/0	1	0	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0046	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
g0047	0/0	1	0	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1404	289	62	60	124	9	32	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0002	0/0	1404	3	3	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0004	0/0	1404	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0006	0/0	1404	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0007	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0008	0/0	1404	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0011	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0012	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0002c0003	0/0	1404	2	0	0	0	0	2	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0003c0013	0/0	1404	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0004c0005	0/0	1410	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0005c0009	0/0	1405	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0006c0010	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0007c0014	0/0	1404	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	4001	283	60	60	121	9	31	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0001t0002	0/0	4001	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0001t0003	0/0	4002	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0001t0005	0/0	4000	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0001t0006	0/0	3998	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0001t0007	0/0	4000	1	0	0	0	0	1	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0002t0001	0/0	4001	3	3	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0004t0001	0/0	4001	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0006t0001	0/0	4001	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0007t0001	0/0	4001	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0008t0008	0/0	4000	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0011t0001	0/0	4001	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0001c0012t0001	0/0	4001	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0002c0003t0001	0/0	4001	2	0	0	0	0	2	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0003c0013t0001	0/0	4001	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0004c0005t0001	0/0	4007	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0005c0009t0001	0/0	4002	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0006c0010t0004	0/0	3997	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102
a0007c0014t0001	0/0	4001	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	copy fasta	chrX	137561127	137577102

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	40	10	9	17	1	3	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0002	0/0	40	4	11	17	1	7	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0003	0/0	24	0	5	18	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0004	0/0	21	9	5	5	2	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0005	0/0	17	1	4	7	1	4	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0006	1/0	16	3	4	7	1	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0007	0/0	14	8	2	2	0	2	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0008	0/0	12	1	4	5	0	2	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0009	0/0	9	0	2	0	2	5	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0010	0/1	8	3	0	3	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0011	0/0	8	0	1	7	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0012	0/0	5	1	2	1	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0013	0/0	7	0	0	6	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0014	0/0	6	1	1	4	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0015	0/0	7	6	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0016	0/0	6	3	2	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0017	0/0	5	1	0	4	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0018	0/0	4	1	0	2	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0019	0/0	4	0	1	3	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0020	0/0	2	1	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0021	0/0	2	0	2	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0022	0/0	2	0	0	2	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0023	0/0	2	1	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0024	0/0	2	0	0	1	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0025	0/0	2	0	0	1	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0026	0/0	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0028	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0030	0/0	1	0	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0032	0/0	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0033	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0034	0/0	1	0	0	0	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0035	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0037	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0038	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0045	0/0	1	0	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0046	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0001g0047	0/0	1	0	1	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0002g0005	0/0	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0003g0036	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0005g0042	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0006g0043	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0001t0007g0014	0/0	1	0	0	0	0	1	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0002t0001g0001	0/0	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0002t0001g0039	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0004t0001g0012	0/0	2	2	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0006t0001g0020	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0007t0001g0001	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0008t0008g0009	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0011t0001g0005	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0001c0012t0001g0006	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0002c0003t0001g0004	0/0	2	0	0	0	0	2	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0003c0013t0001g0001	0/0	1	1	0	0	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0004c0005t0001g0002	0/0	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0005c0009t0001g0001	0/0	1	0	0	0	1	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0006c0010t0004g0027	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
a0007c0014t0001g0002	0/0	1	0	0	1	0	0	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0009	EUR	GBR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00099	hp2	a0001	c0001	t0001	g0004	EUR	GBR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00140	hp1	a0001	c0001	t0001	g0032	EUR	GBR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00280	hp1	a0001	c0001	t0001	g0005	EUR	FIN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00323	hp1	a0004	c0005	t0001	g0002	EUR	FIN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00323	hp2	a0001	c0001	t0001	g0006	EUR	FIN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00408	hp1	a0001	c0001	t0001	g0013	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00408	hp2	a0001	c0001	t0001	g0008	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00423	hp1	a0001	c0001	t0001	g0002	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00423	hp2	a0001	c0001	t0001	g0013	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00438	hp1	a0001	c0001	t0001	g0004	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00438	hp2	a0001	c0001	t0001	g0003	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00544	hp1	a0001	c0001	t0001	g0017	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00544	hp2	a0001	c0001	t0001	g0007	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00558	hp1	a0001	c0001	t0001	g0002	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00558	hp2	a0001	c0001	t0001	g0003	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00597	hp1	a0001	c0001	t0001	g0003	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00597	hp2	a0001	c0001	t0001	g0002	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00609	hp1	a0001	c0001	t0001	g0017	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00639	hp2	a0001	c0001	t0001	g0003	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00642	hp1	a0001	c0001	t0001	g0020	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00673	hp1	a0001	c0001	t0001	g0028	EAS	CHS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00735	hp1	a0001	c0001	t0001	g0047	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG00738	hp1	a0001	c0001	t0001	g0005	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01070	hp2	a0001	c0001	t0001	g0005	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01074	hp1	a0001	c0001	t0001	g0007	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01081	hp2	a0001	c0001	t0001	g0002	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01099	hp1	a0001	c0001	t0001	g0008	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01109	hp1	a0001	c0001	t0001	g0015	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01167	hp1	a0001	c0001	t0001	g0003	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01168	hp1	a0001	c0001	t0001	g0002	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01168	hp2	a0001	c0001	t0001	g0003	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01169	hp1	a0001	c0001	t0001	g0003	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01169	hp2	a0001	c0001	t0001	g0003	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01175	hp1	a0001	c0001	t0001	g0009	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01175	hp2	a0001	c0001	t0001	g0004	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01192	hp1	a0001	c0001	t0001	g0004	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01243	hp1	a0001	c0001	t0001	g0021	AMR	PUR	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01255	hp1	a0001	c0001	t0001	g0005	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01256	hp1	a0001	c0001	t0001	g0002	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01257	hp1	a0001	c0001	t0001	g0006	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01261	hp1	a0001	c0001	t0001	g0016	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01346	hp1	a0001	c0001	t0001	g0002	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01346	hp2	a0001	c0001	t0001	g0012	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01358	hp1	a0001	c0001	t0001	g0009	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01361	hp1	a0001	c0001	t0001	g0014	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01361	hp2	a0001	c0001	t0001	g0004	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01433	hp1	a0001	c0001	t0001	g0019	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01496	hp1	a0001	c0001	t0001	g0006	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01496	hp2	a0001	c0001	t0001	g0002	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01515	hp1	a0005	c0009	t0001	g0001	EUR	IBS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01517	hp1	a0001	c0001	t0001	g0009	EUR	IBS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01891	hp1	a0001	c0001	t0001	g0005	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01891	hp2	a0001	c0001	t0001	g0004	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01928	hp1	a0001	c0001	t0001	g0016	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01934	hp1	a0001	c0001	t0001	g0002	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01943	hp1	a0001	c0001	t0001	g0008	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01952	hp1	a0001	c0001	t0001	g0005	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01975	hp2	a0001	c0001	t0001	g0007	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01978	hp1	a0001	c0001	t0001	g0006	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01981	hp1	a0001	c0001	t0001	g0012	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01981	hp2	a0001	c0001	t0001	g0008	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01993	hp1	a0001	c0001	t0001	g0030	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01993	hp2	a0001	c0001	t0001	g0045	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02004	hp1	a0001	c0001	t0001	g0004	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02004	hp2	a0001	c0001	t0001	g0006	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02027	hp1	a0001	c0001	t0001	g0014	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02040	hp1	a0001	c0001	t0001	g0016	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02055	hp1	a0001	c0001	t0001	g0002	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02056	hp1	a0001	c0001	t0001	g0006	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02071	hp1	a0001	c0001	t0001	g0002	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02074	hp1	a0001	c0001	t0001	g0024	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02080	hp1	a0001	c0001	t0001	g0005	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02083	hp1	a0001	c0001	t0001	g0018	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02129	hp1	a0001	c0001	t0001	g0041	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02132	hp1	a0001	c0001	t0001	g0008	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02135	hp1	a0001	c0001	t0001	g0002	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02148	hp1	a0001	c0001	t0001	g0002	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02148	hp2	a0001	c0001	t0001	g0008	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02155	hp1	a0001	c0001	t0001	g0002	EAS	CDX	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02155	hp2	a0001	c0001	t0001	g0008	EAS	CDX	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02165	hp1	a0001	c0012	t0001	g0006	EAS	CDX	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02165	hp2	a0001	c0001	t0001	g0002	EAS	CDX	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02257	hp1	a0001	c0002	t0001	g0001	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02257	hp2	a0001	c0001	t0001	g0046	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02258	hp1	a0001	c0004	t0001	g0012	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02280	hp1	a0001	c0001	t0001	g0004	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02280	hp2	a0001	c0001	t0001	g0004	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02293	hp1	a0001	c0001	t0001	g0011	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02293	hp2	a0001	c0001	t0001	g0004	AMR	PEL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02451	hp1	a0001	c0008	t0008	g0009	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02451	hp2	a0001	c0001	t0001	g0006	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02523	hp2	a0001	c0001	t0001	g0003	EAS	KHV	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02572	hp1	a0001	c0006	t0001	g0020	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02602	hp1	a0001	c0001	t0001	g0002	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02615	hp1	a0001	c0001	t0001	g0015	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02615	hp2	a0001	c0001	t0001	g0007	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02622	hp1	a0001	c0001	t0001	g0002	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02622	hp2	a0001	c0001	t0001	g0010	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02630	hp1	a0001	c0001	t0001	g0004	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02630	hp2	a0001	c0001	t0001	g0015	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02647	hp1	a0001	c0001	t0001	g0007	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02683	hp2	a0001	c0001	t0001	g0007	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02698	hp1	a0001	c0001	t0001	g0005	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02717	hp1	a0001	c0001	t0001	g0007	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02723	hp1	a0001	c0001	t0001	g0017	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02723	hp2	a0001	c0001	t0001	g0010	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02735	hp1	a0001	c0001	t0001	g0002	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02738	hp1	a0001	c0001	t0001	g0009	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02818	hp1	a0001	c0001	t0001	g0004	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02818	hp2	a0001	c0001	t0001	g0004	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02895	hp1	a0001	c0001	t0001	g0007	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02896	hp1	a0001	c0001	t0002	g0005	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02896	hp2	a0001	c0001	t0001	g0002	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02897	hp1	a0001	c0001	t0001	g0007	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02897	hp2	a0001	c0001	t0002	g0005	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02922	hp1	a0001	c0001	t0001	g0015	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02922	hp2	a0001	c0001	t0001	g0026	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02970	hp1	a0001	c0001	t0001	g0015	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02976	hp1	a0001	c0001	t0001	g0008	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02976	hp2	a0001	c0004	t0001	g0012	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03017	hp1	a0001	c0001	t0001	g0005	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03130	hp1	a0001	c0001	t0001	g0026	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03139	hp1	a0001	c0001	t0001	g0020	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03195	hp2	a0001	c0001	t0001	g0007	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03209	hp1	a0001	c0001	t0001	g0006	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03225	hp1	a0001	c0001	t0001	g0007	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03239	hp1	a0001	c0001	t0001	g0005	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03239	hp2	a0001	c0001	t0001	g0009	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03453	hp1	a0001	c0001	t0001	g0023	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03453	hp2	a0001	c0001	t0001	g0033	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03486	hp1	a0001	c0001	t0001	g0004	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03486	hp2	a0001	c0001	t0001	g0016	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03490	hp1	a0001	c0001	t0001	g0012	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03491	hp1	a0002	c0003	t0001	g0004	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03491	hp2	a0001	c0001	t0001	g0002	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03492	hp1	a0002	c0003	t0001	g0004	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03516	hp1	a0001	c0001	t0001	g0015	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03516	hp2	a0001	c0001	t0001	g0010	AFR	ESN	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03540	hp1	a0001	c0001	t0001	g0006	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03540	hp2	a0001	c0001	t0001	g0007	AFR	GWD	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03654	hp1	a0001	c0001	t0001	g0013	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03669	hp1	a0001	c0001	t0001	g0007	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03669	hp2	a0001	c0001	t0001	g0003	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03704	hp1	a0001	c0001	t0001	g0002	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03704	hp2	a0001	c0001	t0001	g0018	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03710	hp1	a0001	c0001	t0001	g0008	SAS	PJL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03831	hp1	a0001	c0001	t0001	g0024	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03831	hp2	a0001	c0001	t0001	g0009	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03834	hp2	a0001	c0001	t0001	g0009	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03927	hp1	a0001	c0001	t0001	g0025	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03942	hp1	a0001	c0001	t0001	g0002	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG04115	hp1	a0001	c0001	t0001	g0005	SAS	STU	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG04184	hp1	a0001	c0001	t0001	g0008	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG04184	hp2	a0001	c0001	t0007	g0014	SAS	BEB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG04199	hp1	a0001	c0001	t0001	g0034	SAS	STU	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG04204	hp1	a0001	c0001	t0001	g0002	SAS	STU	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG04228	hp1	a0001	c0001	t0001	g0010	SAS	STU	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18522	hp1	a0001	c0001	t0001	g0029	AFR	YRI	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18612	hp1	a0001	c0001	t0001	g0018	EAS	CHB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18747	hp1	a0001	c0001	t0001	g0003	EAS	CHB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18906	hp1	a0001	c0001	t0001	g0012	AFR	YRI	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18906	hp2	a0001	c0002	t0001	g0001	AFR	YRI	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18940	hp1	a0001	c0007	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18941	hp1	a0001	c0001	t0001	g0013	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18941	hp2	a0001	c0001	t0001	g0011	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18943	hp1	a0001	c0001	t0001	g0023	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18944	hp1	a0001	c0001	t0001	g0011	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18945	hp1	a0001	c0001	t0001	g0007	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18946	hp2	a0001	c0001	t0005	g0042	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18947	hp1	a0001	c0001	t0001	g0014	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18947	hp2	a0001	c0001	t0001	g0006	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18948	hp1	a0001	c0001	t0001	g0005	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18949	hp1	a0001	c0001	t0001	g0006	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18949	hp2	a0001	c0001	t0001	g0011	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18950	hp1	a0001	c0001	t0001	g0011	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18950	hp2	a0001	c0001	t0001	g0013	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18952	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18953	hp1	a0001	c0001	t0001	g0008	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18954	hp1	a0001	c0001	t0001	g0011	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18954	hp2	a0001	c0001	t0001	g0006	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18957	hp1	a0001	c0001	t0001	g0008	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18957	hp2	a0001	c0001	t0006	g0043	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18959	hp1	a0001	c0001	t0001	g0025	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18960	hp1	a0007	c0014	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18961	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18962	hp1	a0001	c0001	t0001	g0006	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18965	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18966	hp1	a0001	c0001	t0001	g0013	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18967	hp1	a0001	c0001	t0001	g0005	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18970	hp1	a0001	c0001	t0001	g0004	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18971	hp1	a0001	c0001	t0001	g0010	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18975	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18975	hp2	a0001	c0001	t0001	g0022	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18976	hp1	a0001	c0001	t0001	g0005	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18976	hp2	a0001	c0001	t0001	g0010	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18979	hp1	a0001	c0001	t0001	g0014	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18982	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18984	hp1	a0001	c0001	t0001	g0005	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18988	hp1	a0006	c0010	t0004	g0027	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18989	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18991	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18991	hp2	a0001	c0001	t0001	g0017	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18992	hp1	a0001	c0001	t0001	g0005	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18992	hp2	a0001	c0001	t0003	g0036	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18993	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18993	hp2	a0001	c0001	t0001	g0014	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18994	hp1	a0001	c0001	t0001	g0010	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18995	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18999	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19000	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19002	hp1	a0001	c0001	t0001	g0012	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19002	hp2	a0001	c0001	t0001	g0006	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19005	hp1	a0001	c0001	t0001	g0017	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19006	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19007	hp1	a0001	c0001	t0001	g0006	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19011	hp2	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19012	hp1	a0001	c0001	t0001	g0011	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19030	hp1	a0001	c0001	t0001	g0018	AFR	LWK	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19030	hp2	a0001	c0002	t0001	g0039	AFR	LWK	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19043	hp1	a0001	c0001	t0001	g0004	AFR	LWK	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19055	hp1	a0001	c0001	t0001	g0037	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19056	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19058	hp1	a0001	c0001	t0001	g0013	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19060	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19062	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19063	hp1	a0001	c0001	t0001	g0019	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19064	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19064	hp2	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19066	hp1	a0001	c0001	t0001	g0019	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19068	hp1	a0001	c0001	t0001	g0044	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19070	hp1	a0001	c0001	t0001	g0019	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19074	hp1	a0001	c0001	t0001	g0038	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19074	hp2	a0001	c0001	t0001	g0022	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19076	hp1	a0001	c0011	t0001	g0005	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19080	hp1	a0001	c0001	t0001	g0005	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19080	hp2	a0001	c0001	t0001	g0035	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19082	hp1	a0001	c0001	t0001	g0003	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19083	hp1	a0001	c0001	t0001	g0004	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19084	hp1	a0001	c0001	t0001	g0011	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19084	hp2	a0001	c0001	t0001	g0040	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19085	hp1	a0001	c0001	t0001	g0004	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19087	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19089	hp1	a0001	c0001	t0001	g0004	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19091	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19240	hp1	a0003	c0013	t0001	g0001	AFR	YRI	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA19240	hp2	a0001	c0001	t0001	g0016	AFR	YRI	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA20129	hp1	a0001	c0001	t0001	g0014	AFR	ASW	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA20129	hp2	a0001	c0001	t0001	g0016	AFR	ASW	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA20752	hp1	a0001	c0001	t0001	g0004	EUR	TSI	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA20905	hp1	a0001	c0001	t0001	g0009	SAS	GIH	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01123	hp1	a0001	c0001	t0001	g0002	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG01123	hp2	a0001	c0001	t0001	g0021	AMR	CLM	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02109	hp2	a0001	c0001	t0001	g0015	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG02559	hp2	a0001	c0001	t0001	g0002	AFR	ACB	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
HG03471	hp1	a0001	c0001	t0001	g0004	AFR	MSL	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA18955	hp1	a0001	c0001	t0001	g0002	EAS	JPT	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
NA21309	hp2	a0001	c0001	t0001	g0031	AFR	LWK	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0010	REF	REF	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0006	REF	REF	ZIC3_chrX_137561127_137577102	ZIC3	chrX	137561127	137577102

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:137566789	C C	T T	1	a0007 a0007	1	NA18960.hp1 NA18960.hp1	missense_variant	MODERATE	c.98C>T c.98C>T	p.Ala33Val p.Ala33Val	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	663/4001	98/1404	33/467		chrX	137566789
chrX:137566822	C C	G G	1	a0003 a0003	1	NA19240.hp1 NA19240.hp1	missense_variant	MODERATE	c.131C>G c.131C>G	p.Thr44Ser p.Thr44Ser	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	696/4001	131/1404	44/467		chrX	137566822
chrX:137566825	A A	ACGCCGC ACGCCGC	1	a0004 a0004	1	HG00323.hp1 HG00323.hp1	disruptive_inframe_insertion	MODERATE	c.156_161dupCGCCGC c.156_161dupCGCCGC	p.Ala53_Ala54dup p.Ala53_Ala54dup	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	727/4001	162/1404	54/467	INFO_REALIGN_3_PRIME	chrX	137566825
chrX:137567136	G G	A A	1	a0002 a0002	2	HG03491.hp1 HG03492.hp1 HG03491.hp1 HG03492.hp1	missense_variant	MODERATE	c.445G>A c.445G>A	p.Ala149Thr p.Ala149Thr	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	1010/4001	445/1404	149/467		chrX	137567136
chrX:137569960	G G	C C	1	a0006 a0006	1	NA18988.hp1 NA18988.hp1	missense_variant	MODERATE	c.1294G>C c.1294G>C	p.Ala432Pro p.Ala432Pro	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1859/4001	1294/1404	432/467		chrX	137569960
chrX:137570030	A A	AC AC	1	a0005 a0005	1	HG01515.hp1 HG01515.hp1	frameshift_variant	HIGH	c.1367dupC c.1367dupC	p.Gly457fs p.Gly457fs	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1933/4001	1368/1404	456/467	INFO_REALIGN_3_PRIME	chrX	137570030

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:137566853	T T	C C	1	a0001c0002 a0001c0002	3	HG02257.hp1 NA18906.hp2 NA19030.hp2 HG02257.hp1 NA18906.hp2 NA19030.hp2	synonymous_variant	LOW	c.162T>C c.162T>C	p.Ala54Ala p.Ala54Ala	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	727/4001	162/1404	54/467	chrX	137566853
chrX:137567111	C C	T T	1	a0001c0012 a0001c0012	1	HG02165.hp1 HG02165.hp1	synonymous_variant	LOW	c.420C>T c.420C>T	p.Phe140Phe p.Phe140Phe	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	985/4001	420/1404	140/467	chrX	137567111
chrX:137567153	C C	A A	1	a0001c0006 a0001c0006	1	HG02572.hp1 HG02572.hp1	synonymous_variant	LOW	c.462C>A c.462C>A	p.Pro154Pro p.Pro154Pro	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	1027/4001	462/1404	154/467	chrX	137567153
chrX:137567489	G G	A A	1	a0001c0007 a0001c0007	1	NA18940.hp1 NA18940.hp1	synonymous_variant	LOW	c.798G>A c.798G>A	p.Lys266Lys p.Lys266Lys	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	1363/4001	798/1404	266/467	chrX	137567489
chrX:137567552	G G	A A	1	a0001c0004 a0001c0004	2	HG02258.hp1 HG02976.hp2 HG02258.hp1 HG02976.hp2	synonymous_variant	LOW	c.861G>A c.861G>A	p.Val287Val p.Val287Val	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	1426/4001	861/1404	287/467	chrX	137567552
chrX:137567597	C C	T T	1	a0001c0011 a0001c0011	1	NA19076.hp1 NA19076.hp1	synonymous_variant	LOW	c.906C>T c.906C>T	p.Cys302Cys p.Cys302Cys	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	1471/4001	906/1404	302/467	chrX	137567597
chrX:137567603	G G	A A	1	a0001c0008 a0001c0008	1	HG02451.hp1 HG02451.hp1	synonymous_variant	LOW	c.912G>A c.912G>A	p.Arg304Arg p.Arg304Arg	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	1477/4001	912/1404	304/467	chrX	137567603
chrX:137569959	C C	G G	1	a0006c0010 a0006c0010	1	NA18988.hp1 NA18988.hp1	synonymous_variant	LOW	c.1293C>G c.1293C>G	p.Pro431Pro p.Pro431Pro	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1858/4001	1293/1404	431/467	chrX	137569959

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:137566598	A A	AC AC	1	a0001c0001t0003 a0001c0001t0003	1	NA18992.hp2 NA18992.hp2	5_prime_UTR_variant	MODIFIER	c.-90dupC c.-90dupC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3	89	INFO_REALIGN_3_PRIME	chrX	137566598
chrX:137566607	C C	T T	1	a0001c0001t0002 a0001c0001t0002	2	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-85C>T c.-85C>T	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/3			chrX	137566607
chrX:137570083	A A	AC AC	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.16dupC c.16dupC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	17	INFO_REALIGN_3_PRIME	chrX	137570083
chrX:137570111	A A	G G	1	a0001c0008t0008 a0001c0008t0008	1	HG02451.hp1 HG02451.hp1	3_prime_UTR_variant	MODIFIER	c.41A>G c.41A>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	41		chrX	137570111
chrX:137570118	TA TA	T T	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.52delA c.52delA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	52	INFO_REALIGN_3_PRIME	chrX	137570118
chrX:137570228	CA CA	C C	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.162delA c.162delA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	162	INFO_REALIGN_3_PRIME	chrX	137570228
chrX:137570233	G G	T T	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.163G>T c.163G>T	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	163		chrX	137570233
chrX:137570258	GA GA	G G	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.192delA c.192delA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	192	INFO_REALIGN_3_PRIME	chrX	137570258
chrX:137570283	AT AT	A A	1	a0001c0001t0005 a0001c0001t0005	1	NA18946.hp2 NA18946.hp2	3_prime_UTR_variant	MODIFIER	c.219delT c.219delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	219	INFO_REALIGN_3_PRIME	chrX	137570283
chrX:137570291	C C	CA CA	1	a0001c0001t0006 a0001c0001t0006	1	NA18957.hp2 NA18957.hp2	3_prime_UTR_variant	MODIFIER	c.225dupA c.225dupA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	226	INFO_REALIGN_3_PRIME	chrX	137570291
chrX:137570307	CT CT	C C	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.242delT c.242delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	242	INFO_REALIGN_3_PRIME	chrX	137570307
chrX:137570392	AG AG	A A	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.324delG c.324delG	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	324	INFO_REALIGN_3_PRIME	chrX	137570392
chrX:137570444	CT CT	C C	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.379delT c.379delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	379	INFO_REALIGN_3_PRIME	chrX	137570444
chrX:137570561	AG AG	A A	1	a0001c0001t0006 a0001c0001t0006	1	NA18957.hp2 NA18957.hp2	3_prime_UTR_variant	MODIFIER	c.494delG c.494delG	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	494	INFO_REALIGN_3_PRIME	chrX	137570561
chrX:137570566	C C	G G	1	a0001c0008t0008 a0001c0008t0008	1	HG02451.hp1 HG02451.hp1	3_prime_UTR_variant	MODIFIER	c.496C>G c.496C>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	496		chrX	137570566
chrX:137570591	AG AG	A A	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.523delG c.523delG	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	523	INFO_REALIGN_3_PRIME	chrX	137570591
chrX:137570600	A A	AT AT	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.531dupT c.531dupT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	532	INFO_REALIGN_3_PRIME	chrX	137570600
chrX:137570656	CT CT	C C	3	a0001c0001t0007 a0001c0008t0008 a0006c0010t0004 a0001c0001t0007 a0001c0008t0008 a0006c0010t0004	3	HG02451.hp1 HG04184.hp2 NA18988.hp1 HG02451.hp1 HG04184.hp2 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.595delT c.595delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	595	INFO_REALIGN_3_PRIME	chrX	137570656
chrX:137570855	TC TC	T T	1	a0001c0001t0006 a0001c0001t0006	1	NA18957.hp2 NA18957.hp2	3_prime_UTR_variant	MODIFIER	c.787delC c.787delC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	787	INFO_REALIGN_3_PRIME	chrX	137570855
chrX:137570866	GT GT	G G	1	a0001c0001t0006 a0001c0001t0006	1	NA18957.hp2 NA18957.hp2	3_prime_UTR_variant	MODIFIER	c.800delT c.800delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	800	INFO_REALIGN_3_PRIME	chrX	137570866
chrX:137570949	C C	CT CT	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.885dupT c.885dupT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	886	INFO_REALIGN_3_PRIME	chrX	137570949
chrX:137571080	T T	TC TC	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.1012dupC c.1012dupC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1013	INFO_REALIGN_3_PRIME	chrX	137571080
chrX:137571285	C C	CA CA	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.1215_1216insA c.1215_1216insA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1216		chrX	137571285
chrX:137571291	GT GT	G G	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.1223delT c.1223delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1223	INFO_REALIGN_3_PRIME	chrX	137571291
chrX:137571382	AT AT	A A	1	a0001c0001t0006 a0001c0001t0006	1	NA18957.hp2 NA18957.hp2	3_prime_UTR_variant	MODIFIER	c.1316delT c.1316delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1316	INFO_REALIGN_3_PRIME	chrX	137571382
chrX:137571563	T T	G G	1	a0001c0001t0005 a0001c0001t0005	1	NA18946.hp2 NA18946.hp2	3_prime_UTR_variant	MODIFIER	c.1493T>G c.1493T>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1493		chrX	137571563
chrX:137571610	GA GA	G G	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.1547delA c.1547delA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1547	INFO_REALIGN_3_PRIME	chrX	137571610
chrX:137571631	AT AT	A A	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.1566delT c.1566delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1566	INFO_REALIGN_3_PRIME	chrX	137571631
chrX:137571691	A A	G G	1	a0001c0008t0008 a0001c0008t0008	1	HG02451.hp1 HG02451.hp1	3_prime_UTR_variant	MODIFIER	c.1621A>G c.1621A>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1621		chrX	137571691
chrX:137571723	T T	TA TA	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.1657dupA c.1657dupA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1658	INFO_REALIGN_3_PRIME	chrX	137571723
chrX:137571989	G G	GT GT	1	a0006c0010t0004 a0006c0010t0004	1	NA18988.hp1 NA18988.hp1	3_prime_UTR_variant	MODIFIER	c.1924dupT c.1924dupT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	3/3	1925	INFO_REALIGN_3_PRIME	chrX	137571989

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:137567867	G G	GC GC	1	a0006c0010t0004g0027 a0006c0010t0004g0027	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.1060+118dupC c.1060+118dupC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137567867
chrX:137567881	A A	G G	2	a0001c0001t0001g0026 a0001c0001t0001g0047 a0001c0001t0001g0026 a0001c0001t0001g0047	3	HG00735.hp1 HG02922.hp2 HG03130.hp1 HG00735.hp1 HG02922.hp2 HG03130.hp1	intron_variant	MODIFIER	c.1060+130A>G c.1060+130A>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137567881
chrX:137568167	C C	CT CT	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG02257.hp2 HG02257.hp2	intron_variant	MODIFIER	c.1060+424dupT c.1060+424dupT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568167
chrX:137568328	C C	CTGGA CTGGA	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	HG01993.hp2 HG01993.hp2	intron_variant	MODIFIER	c.1061-572_1061-569d others(6): Show c.1061-572_1061-569dupGGAT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568328
chrX:137568330	G G	GGATC GGATC	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	HG01993.hp1 HG01993.hp1	intron_variant	MODIFIER	c.1061-563_1061-560d others(6): Show c.1061-563_1061-560dupGATC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568330
chrX:137568330	GGATC GGATC	G G	6	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0019 others(3): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0019 a0001c0001t0001g0044 a0004c0005t0001g0002 a0007c0014t0001g0002	71	HG00323.hp1 HG00423.hp1 HG00438.hp2 others(68): Show HG00323.hp1 HG00423.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG01081.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01256.hp1 HG01346.hp1 HG01433.hp1 HG01496.hp2 HG01934.hp1 HG01975.hp1 HG01978.hp2 HG02055.hp1 HG02071.hp1 HG02135.hp1 HG02148.hp1 HG02155.hp1 HG02165.hp2 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02622.hp1 HG02735.hp1 HG02896.hp2 HG03491.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03942.hp1 HG04204.hp1 NA18747.hp1 NA18952.hp1 NA18955.hp1 NA18960.hp1 NA18961.hp1 NA18965.hp1 NA18975.hp1 NA18982.hp1 NA18989.hp1 NA18991.hp1 NA18993.hp1 NA18995.hp1 NA18999.hp1 NA19000.hp1 NA19006.hp1 NA19011.hp2 NA19056.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19082.hp1 NA19087.hp1 NA19091.hp1 NA20805.hp1	intron_variant	MODIFIER	c.1061-563_1061-560d others(6): Show c.1061-563_1061-560delGATC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568330
chrX:137568330	GGATCGAT others(1): Show GGATCGATC	G G	4	a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0026 others(1): Show a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0026 a0001c0001t0006g0043	18	HG01109.hp1 HG02109.hp2 HG02293.hp1 others(15): Show HG01109.hp1 HG02109.hp2 HG02293.hp1 HG02615.hp1 HG02630.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03130.hp1 HG03516.hp1 NA18941.hp2 NA18944.hp1 NA18949.hp2 NA18950.hp1 NA18954.hp1 NA18957.hp2 NA19012.hp1 NA19084.hp1	intron_variant	MODIFIER	c.1061-567_1061-560d others(10): Show c.1061-567_1061-560delGATCGATC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568330
chrX:137568331	GATCGATC others(5): Show GATCGATCGATCT	G G	3	a0001c0001t0001g0041 a0001c0001t0001g0047 a0001c0001t0005g0042 a0001c0001t0001g0041 a0001c0001t0001g0047 a0001c0001t0005g0042	3	HG00735.hp1 HG02129.hp1 NA18946.hp2 HG00735.hp1 HG02129.hp1 NA18946.hp2	intron_variant	MODIFIER	c.1061-567_1061-556d others(14): Show c.1061-567_1061-556delGATCGATCTATC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568331
chrX:137568333	T T	C C	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG00673.hp1 HG00673.hp1	intron_variant	MODIFIER	c.1061-569T>C c.1061-569T>C	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568333
chrX:137568335	G G	GATCT GATCT	3	a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0007g0014 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0007g0014	12	HG00544.hp1 HG00609.hp1 HG01361.hp1 others(9): Show HG00544.hp1 HG00609.hp1 HG01361.hp1 HG02027.hp1 HG02723.hp1 HG04184.hp2 NA18947.hp1 NA18979.hp1 NA18991.hp2 NA18993.hp2 NA19005.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1061-564_1061-563i others(6): Show c.1061-564_1061-563insTATC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568335
chrX:137568335	G G	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG03927.hp1 NA18959.hp1 HG03927.hp1 NA18959.hp1	intron_variant	MODIFIER	c.1061-567G>T c.1061-567G>T	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568335
chrX:137568335	GATCGATC others(1): Show GATCGATCT	G G	3	a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0004t0001g0012 a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0004t0001g0012	9	HG01346.hp2 HG01981.hp1 HG02074.hp1 others(6): Show HG01346.hp2 HG01981.hp1 HG02074.hp1 HG02258.hp1 HG02976.hp2 HG03490.hp1 HG03831.hp1 NA18906.hp1 NA19002.hp1	intron_variant	MODIFIER	c.1061-563_1061-556d others(10): Show c.1061-563_1061-556delGATCTATC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568335
chrX:137568339	G G	GATCT GATCT	5	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0022 others(2): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0022 a0001c0001t0003g0036 a0002c0003t0001g0004	38	HG00099.hp2 HG00408.hp2 HG00438.hp1 others(35): Show HG00099.hp2 HG00408.hp2 HG00438.hp1 HG01099.hp1 HG01175.hp2 HG01192.hp1 HG01361.hp2 HG01891.hp2 HG01943.hp1 HG01981.hp2 HG02004.hp1 HG02132.hp1 HG02148.hp2 HG02155.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02630.hp1 HG02818.hp1 HG02818.hp2 HG02976.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03710.hp1 HG04184.hp1 NA18953.hp1 NA18957.hp1 NA18970.hp1 NA18975.hp2 NA18992.hp2 NA19043.hp1 NA19074.hp2 NA19083.hp1 NA19085.hp1 NA19089.hp1 NA20752.hp1	intron_variant	MODIFIER	c.1061-520_1061-517d others(6): Show c.1061-520_1061-517dupCTAT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568339
chrX:137568339	G G	GATCTATC others(1): Show GATCTATCT	3	a0001c0001t0001g0010 a0001c0001t0001g0023 a0001c0001t0001g0037 a0001c0001t0001g0010 a0001c0001t0001g0023 a0001c0001t0001g0037	11	HG02622.hp2 HG02723.hp2 HG03453.hp1 others(8): Show HG02622.hp2 HG02723.hp2 HG03453.hp1 HG03516.hp2 HG04228.hp1 NA18943.hp1 NA18971.hp1 NA18976.hp2 NA18994.hp1 NA19055.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1061-524_1061-517d others(10): Show c.1061-524_1061-517dupCTATCTAT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568339
chrX:137568339	G G	GATCTATC others(5): Show GATCTATCTATCT	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.1061-528_1061-517d others(14): Show c.1061-528_1061-517dupCTATCTATCTAT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568339
chrX:137568339	G G	GATCTATC others(9): Show GATCTATCTATCTATCT	1	a0001c0002t0001g0039 a0001c0002t0001g0039	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.1061-532_1061-517d others(18): Show c.1061-532_1061-517dupCTATCTATCTATCTAT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568339
chrX:137568339	G G	T T	12	a0001c0001t0001g0005 a0001c0001t0001g0013 a0001c0001t0001g0014 others(9): Show a0001c0001t0001g0005 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0040 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0002g0005 a0001c0001t0007g0014 a0001c0011t0001g0005	48	HG00280.hp1 HG00408.hp1 HG00423.hp2 others(45): Show HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00544.hp1 HG00609.hp1 HG00738.hp1 HG01070.hp2 HG01255.hp1 HG01361.hp1 HG01433.hp1 HG01891.hp1 HG01952.hp1 HG01993.hp2 HG02027.hp1 HG02080.hp1 HG02698.hp1 HG02723.hp1 HG02896.hp1 HG02897.hp2 HG03017.hp1 HG03239.hp1 HG03654.hp1 HG03927.hp1 HG04115.hp1 HG04184.hp2 NA18941.hp1 NA18947.hp1 NA18948.hp1 NA18950.hp2 NA18959.hp1 NA18966.hp1 NA18967.hp1 NA18976.hp1 NA18979.hp1 NA18984.hp1 NA18991.hp2 NA18992.hp1 NA18993.hp2 NA19005.hp1 NA19058.hp1 NA19063.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19076.hp1 NA19080.hp1 NA19084.hp2 NA20129.hp1	intron_variant	MODIFIER	c.1061-563G>T c.1061-563G>T	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568339
chrX:137568339	GATCT GATCT	G G	6	a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0018 others(3): Show a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0008t0008g0009	30	HG00099.hp1 HG00140.hp1 HG00544.hp2 others(27): Show HG00099.hp1 HG00140.hp1 HG00544.hp2 HG01074.hp1 HG01175.hp1 HG01358.hp1 HG01517.hp1 HG01975.hp2 HG02083.hp1 HG02451.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02738.hp1 HG02895.hp1 HG02897.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03540.hp2 HG03669.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp2 NA18522.hp1 NA18612.hp1 NA18945.hp1 NA19030.hp1 NA20905.hp1	intron_variant	MODIFIER	c.1061-520_1061-517d others(6): Show c.1061-520_1061-517delCTAT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568339
chrX:137568339	GATCTATC others(1): Show GATCTATCT	G G	3	a0001c0001t0001g0021 a0001c0001t0001g0031 a0001c0001t0001g0046 a0001c0001t0001g0021 a0001c0001t0001g0031 a0001c0001t0001g0046	4	HG01123.hp2 HG01243.hp1 HG02257.hp2 others(1): Show HG01123.hp2 HG01243.hp1 HG02257.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1061-524_1061-517d others(10): Show c.1061-524_1061-517delCTATCTAT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568339
chrX:137568343	T T	G G	3	a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0006t0001g0020 a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0006t0001g0020	9	HG00642.hp1 HG01261.hp1 HG01928.hp1 others(6): Show HG00642.hp1 HG01261.hp1 HG01928.hp1 HG02040.hp1 HG02572.hp1 HG03139.hp1 HG03486.hp2 NA19240.hp2 NA20129.hp2	intron_variant	MODIFIER	c.1061-559T>G c.1061-559T>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568343
chrX:137568347	T T	G G	2	a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0018 a0001c0001t0001g0029	5	HG02083.hp1 HG03704.hp2 NA18522.hp1 others(2): Show HG02083.hp1 HG03704.hp2 NA18522.hp1 NA18612.hp1 NA19030.hp1	intron_variant	MODIFIER	c.1061-555T>G c.1061-555T>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568347
chrX:137568384	AT AT	A A	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.1061-517delT c.1061-517delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568384
chrX:137568524	GC GC	G G	1	a0001c0001t0005g0042 a0001c0001t0005g0042	1	NA18946.hp2 NA18946.hp2	intron_variant	MODIFIER	c.1061-376delC c.1061-376delC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568524
chrX:137568670	G G	GT GT	1	a0006c0010t0004g0027 a0006c0010t0004g0027	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.1061-228dupT c.1061-228dupT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568670
chrX:137568703	A A	AC AC	1	a0001c0001t0003g0036 a0001c0001t0003g0036	1	NA18992.hp2 NA18992.hp2	intron_variant	MODIFIER	c.1061-195dupC c.1061-195dupC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568703
chrX:137568749	C C	G G	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG00673.hp1 HG00673.hp1	intron_variant	MODIFIER	c.1061-153C>G c.1061-153C>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568749
chrX:137568775	A A	T T	41	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(38): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0002g0005 a0001c0001t0005g0042 a0001c0001t0006g0043 a0001c0001t0007g0014 a0001c0002t0001g0001 a0001c0002t0001g0039 a0001c0004t0001g0012 a0001c0007t0001g0001 a0001c0011t0001g0005 a0002c0003t0001g0004 a0003c0013t0001g0001 a0004c0005t0001g0002 a0005c0009t0001g0001 a0006c0010t0004g0027 a0007c0014t0001g0002	209	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(206): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00423.hp1 HG00438.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02155.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03098.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp2 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp1 NA18949.hp2 NA18950.hp1 NA18954.hp1 NA18955.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18965.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18975.hp2 NA18976.hp1 NA18976.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18999.hp2 NA19002.hp1 NA19004.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19060.hp1 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19074.hp2 NA19076.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1061-127A>T c.1061-127A>T	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2		chrX	137568775
chrX:137568885	GT GT	G G	1	a0001c0001t0006g0043 a0001c0001t0006g0043	1	NA18957.hp2 NA18957.hp2	intron_variant	MODIFIER	c.1061-12delT c.1061-12delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	137568885
chrX:137569226	T T	TA TA	1	a0001c0001t0005g0042 a0001c0001t0005g0042	1	NA18946.hp2 NA18946.hp2	intron_variant	MODIFIER	c.1224+161_1224+162i others(3): Show c.1224+161_1224+162insA	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2		chrX	137569226
chrX:137569234	A A	AG AG	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	NA19068.hp1 NA19068.hp1	intron_variant	MODIFIER	c.1224+174dupG c.1224+174dupG	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	137569234
chrX:137569286	A A	G G	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG00140.hp1 HG00140.hp1	intron_variant	MODIFIER	c.1224+221A>G c.1224+221A>G	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2		chrX	137569286
chrX:137569445	AG AG	A A	1	a0001c0001t0006g0043 a0001c0001t0006g0043	1	NA18957.hp2 NA18957.hp2	intron_variant	MODIFIER	c.1224+383delG c.1224+383delG	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	137569445
chrX:137569664	CT CT	C C	1	a0001c0001t0006g0043 a0001c0001t0006g0043	1	NA18957.hp2 NA18957.hp2	intron_variant	MODIFIER	c.1225-224delT c.1225-224delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	137569664
chrX:137569689	T T	TC TC	1	a0006c0010t0004g0027 a0006c0010t0004g0027	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.1225-201dupC c.1225-201dupC	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	137569689
chrX:137569749	G G	T T	4	a0001c0001t0001g0022 a0001c0001t0001g0035 a0001c0001t0001g0037 others(1): Show a0001c0001t0001g0022 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0040	5	NA18975.hp2 NA19055.hp1 NA19074.hp2 others(2): Show NA18975.hp2 NA19055.hp1 NA19074.hp2 NA19080.hp2 NA19084.hp2	intron_variant	MODIFIER	c.1225-142G>T c.1225-142G>T	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2		chrX	137569749
chrX:137569751	AT AT	A A	2	a0001c0001t0006g0043 a0006c0010t0004g0027 a0001c0001t0006g0043 a0006c0010t0004g0027	2	NA18957.hp2 NA18988.hp1 NA18957.hp2 NA18988.hp1	intron_variant	MODIFIER	c.1225-132delT c.1225-132delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	137569751
chrX:137569768	T T	C C	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.1225-123T>C c.1225-123T>C	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2		chrX	137569768
chrX:137569884	AT AT	A A	2	a0001c0001t0006g0043 a0006c0010t0004g0027 a0001c0001t0006g0043 a0006c0010t0004g0027	2	NA18957.hp2 NA18988.hp1 NA18957.hp2 NA18988.hp1	splice_region_variant&intron_variant	LOW	c.1225-3delT c.1225-3delT	ZIC3	ENSG00000156925.12	transcript	ENST00000287538.10	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	137569884

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JoGo Online Haplotype Explorer ZIC3_chrX_137561127_137577102

JoGo Local Haplotype Explorer (on iGV) ZIC3_chrX_137561127_137577102

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 7)

CCoding Level Haplotype Info (Total: 14)

TTranscript Level Haplotype Info (Total: 8)

GGenebody Level Haplotype Info (Total: 47)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 14)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 19)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 61)

Haplotype Details by Sample (Haploid Level) (Total: 306)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 6)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 8)

TTranscript Level Haplotype Variants (Exon) (Total: 31)

GGenebody Level Haplotype Variants (Intron) (Total: 38)

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Annotation (Repeats)

Annotation (SNP Array)