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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   LETM1_chr4_1806479_1861156  LETM1_chr4_1806479_1861156 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 3954
ensemblid ENSG00000168924.15
hgncid 6556
symbol LETM1
name leucine zipper and EF-hand containing transmembrane protein 1
refseq_nuc NM_012318.3
refseq_prot NP_036450.1
ensembl_nuc ENST00000302787.3
ensembl_prot ENSP00000305653.2
mane_status MANE Select
chr chr4
start 1811479
end 1856156
strand -
ver v1.2
region chr4:1811479-1856156
region5000 chr4:1806479-1861156
regionname0 LETM1_chr4_1811479_1856156
regionname5000 LETM1_chr4_1806479_1861156

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 739 170 53 37 45 9 24 27 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002 0/0 739 7 3 1 3 0 0 3 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0003 0/0 739 4 4 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0004 0/0 739 3 0 1 0 0 2 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0005 0/0 739 3 2 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0006 0/0 739 2 2 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0007 0/0 739 2 0 0 0 2 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0008 0/0 739 2 2 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0009 0/0 739 2 0 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0010 0/0 739 1 0 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0011 0/0 739 1 1 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0012 0/0 739 1 1 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0013 0/0 739 1 0 0 1 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0014 0/0 739 1 0 0 1 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/1 2220 160 44 37 45 9 24 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0002 1/0 2220 8 7 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0003 0/0 2220 7 3 1 3 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0004 0/0 2220 4 4 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0005 0/0 2220 3 2 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0006 0/0 2220 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0007 0/0 2220 2 0 1 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0008 0/0 2220 2 0 0 0 2 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0009 0/0 2220 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0010 0/0 2220 2 0 2 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0011 0/0 2220 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0012 0/0 2220 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0013 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0014 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0015 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0016 0/0 2220 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0017 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
c0018 0/0 2220 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/1 3152 120 31 27 31 10 20 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0002 0/0 3153 27 5 10 8 1 3 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0003 0/0 3153 4 4 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0004 0/0 3153 4 4 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0005 0/0 3152 4 4 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0006 1/0 3152 3 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0007 0/0 3152 3 0 0 3 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0008 0/0 3152 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0009 0/0 3151 2 0 1 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0010 0/0 3151 2 1 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0011 0/0 3152 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0012 0/0 3152 2 1 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0013 0/0 3154 2 1 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0014 0/0 3152 2 0 1 0 1 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0015 0/0 3139 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0016 0/0 3140 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0017 0/0 3153 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0018 0/0 3152 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0019 0/0 3154 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0020 0/0 3152 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0021 0/0 3140 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0022 0/0 3152 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0023 0/0 3152 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0024 0/0 3152 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0025 0/0 3140 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0026 0/0 3151 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0027 0/0 3154 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0028 0/0 3152 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0029 0/0 3153 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0030 0/0 3153 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0031 0/0 3154 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0032 0/0 3153 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0033 0/0 3152 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0034 0/0 3153 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
t0035 0/0 3152 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 3 3 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0002 0/0 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0003 0/0 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0004 0/0 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0005 0/0 2 0 0 0 2 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0006 0/0 2 0 0 1 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0007 0/0 2 0 1 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0008 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0009 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0010 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0011 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0012 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0013 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0014 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0015 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0016 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0017 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0018 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0019 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0020 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0021 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0022 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0023 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0024 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0025 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0026 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0027 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0028 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0029 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0030 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0031 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0032 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0033 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0034 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0035 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0036 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0037 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0038 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0039 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0040 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0041 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0042 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0043 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0044 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0045 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0046 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0047 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0048 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0049 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0050 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0051 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0052 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0053 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0054 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0055 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0056 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0057 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0058 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0059 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0060 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0061 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0062 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0063 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0064 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0065 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0066 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0067 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0068 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0069 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0070 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0071 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0072 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0073 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0074 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0075 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0076 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0077 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0078 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0079 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0080 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0081 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0082 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0083 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0084 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0085 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0086 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0087 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0088 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0089 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0090 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0091 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0092 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0093 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0094 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0095 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0096 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0097 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0098 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0099 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0100 0/1 1 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0101 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0102 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0103 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0104 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0105 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0106 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0107 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0108 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0109 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0110 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0111 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0112 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0113 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0114 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0115 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0116 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0117 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0118 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0119 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0120 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0121 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0122 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0123 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0124 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0125 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0126 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0127 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0128 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0129 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0130 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0131 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0132 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0133 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0134 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0135 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0136 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0137 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0138 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0139 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0140 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0141 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0142 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0143 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0144 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0145 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0146 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0147 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0148 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0149 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0150 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0151 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0152 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0153 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0154 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0155 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0156 1/0 1 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0157 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0158 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0159 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0160 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0161 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0162 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0163 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0164 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0165 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0166 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0167 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0168 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0169 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0170 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0171 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0172 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0173 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0174 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0175 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0176 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0177 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0178 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0179 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0180 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0181 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0182 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0183 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0184 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0185 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0186 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0187 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0188 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0189 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0190 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0191 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
g0192 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/1 2220 160 44 37 45 9 24 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0002 1/0 2220 8 7 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0013 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0017 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002c0003 0/0 2220 7 3 1 3 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0003c0004 0/0 2220 4 4 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0004c0007 0/0 2220 2 0 1 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0004c0011 0/0 2220 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0005c0005 0/0 2220 3 2 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0006c0006 0/0 2220 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0007c0008 0/0 2220 2 0 0 0 2 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0008c0009 0/0 2220 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0009c0010 0/0 2220 2 0 2 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0010c0012 0/0 2220 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0011c0015 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0012c0014 0/0 2220 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0013c0016 0/0 2220 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0014c0018 0/0 2220 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/1 5371 106 26 24 29 8 18 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0002 0/0 5372 26 5 10 8 0 3 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0005 0/0 5371 4 4 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0007 0/0 5371 3 0 0 3 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0008 0/0 5371 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0010 0/0 5370 2 1 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0011 0/0 5371 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0012 0/0 5371 2 1 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0013 0/0 5373 2 1 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0014 0/0 5371 2 0 1 0 1 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0020 0/0 5371 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0028 0/0 5371 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0029 0/0 5372 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0030 0/0 5372 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0031 0/0 5373 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0032 0/0 5372 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0033 0/0 5371 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0034 0/0 5372 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0001t0035 0/0 5371 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0002t0004 0/0 5372 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0002t0006 1/0 5371 3 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0002t0016 0/0 5359 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0002t0017 0/0 5372 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0002t0019 0/0 5373 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0013t0015 0/0 5358 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0001c0017t0001 0/0 5371 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002c0003t0009 0/0 5370 2 0 1 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002c0003t0021 0/0 5359 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002c0003t0022 0/0 5371 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002c0003t0023 0/0 5371 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002c0003t0024 0/0 5371 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0002c0003t0026 0/0 5370 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0003c0004t0003 0/0 5372 4 4 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0004c0007t0001 0/0 5371 2 0 1 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0004c0011t0001 0/0 5371 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0005c0005t0004 0/0 5372 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0005c0005t0018 0/0 5371 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0006c0006t0025 0/0 5359 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0006c0006t0027 0/0 5373 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0007c0008t0001 0/0 5371 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0007c0008t0002 0/0 5372 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0008c0009t0001 0/0 5371 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0009c0010t0001 0/0 5371 2 0 2 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0010c0012t0001 0/0 5371 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0011c0015t0001 0/0 5371 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0012c0014t0001 0/0 5371 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0013c0016t0001 0/0 5371 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156
a0014c0018t0001 0/0 5371 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 copy fasta chr4 1806479 1861156

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 3 3 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0005 0/0 2 0 0 0 2 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0006 0/0 2 0 0 1 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0021 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0024 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0029 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0030 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0031 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0032 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0033 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0034 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0035 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0036 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0038 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0040 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0043 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0045 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0046 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0049 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0054 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0056 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0058 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0059 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0060 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0061 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0062 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0067 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0068 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0069 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0071 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0073 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0074 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0075 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0076 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0077 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0079 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0080 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0081 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0083 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0085 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0089 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0090 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0093 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0094 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0096 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0099 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0100 0/1 1 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0101 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0102 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0103 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0104 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0105 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0106 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0107 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0108 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0110 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0112 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0113 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0114 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0116 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0117 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0119 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0120 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0121 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0122 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0123 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0127 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0128 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0129 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0130 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0137 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0138 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0139 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0140 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0141 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0142 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0143 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0144 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0148 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0149 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0150 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0152 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0153 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0158 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0159 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0161 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0162 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0164 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0165 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0168 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0170 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0171 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0172 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0173 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0175 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0176 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0177 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0178 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0179 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0183 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0191 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0001g0192 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0039 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0050 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0051 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0053 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0055 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0063 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0066 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0072 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0087 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0088 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0091 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0092 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0109 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0115 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0124 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0125 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0126 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0131 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0132 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0145 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0151 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0157 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0160 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0180 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0181 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0002g0188 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0005g0004 0/0 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0005g0041 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0005g0095 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0007g0134 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0007g0135 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0007g0136 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0008g0002 0/0 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0010g0097 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0010g0166 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0011g0163 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0011g0167 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0012g0022 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0012g0023 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0013g0174 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0013g0182 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0014g0064 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0014g0065 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0020g0008 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0028g0044 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0029g0133 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0030g0052 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0031g0082 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0032g0057 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0033g0078 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0034g0147 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0001t0035g0086 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0004g0013 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0004g0014 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0006g0154 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0006g0155 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0006g0156 1/0 1 0 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0016g0009 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0017g0012 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0002t0019g0010 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0013t0015g0011 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0001c0017t0001g0169 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0002c0003t0009g0027 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0002c0003t0009g0185 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0002c0003t0021g0020 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0002c0003t0022g0184 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0002c0003t0023g0187 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0002c0003t0024g0028 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0002c0003t0026g0186 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0003c0004t0003g0015 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0003c0004t0003g0016 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0003c0004t0003g0017 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0003c0004t0003g0018 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0004c0007t0001g0007 0/0 2 0 1 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0004c0011t0001g0098 0/0 1 0 0 0 0 1 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0005c0005t0004g0003 0/0 2 2 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0005c0005t0018g0019 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0006c0006t0025g0025 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0006c0006t0027g0026 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0007c0008t0001g0047 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0007c0008t0002g0048 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0008c0009t0001g0189 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0008c0009t0001g0190 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0009c0010t0001g0070 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0009c0010t0001g0111 0/0 1 0 1 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0010c0012t0001g0042 0/0 1 0 0 0 1 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0011c0015t0001g0146 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0012c0014t0001g0084 0/0 1 1 0 0 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0013c0016t0001g0118 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
a0014c0018t0001g0037 0/0 1 0 0 1 0 0 LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0001 g0104 EUR GBR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00099 hp2 a0001 c0001 t0001 g0101 EUR GBR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00140 hp1 a0001 c0001 t0001 g0062 EUR GBR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00140 hp2 a0001 c0001 t0001 g0005 EUR GBR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00280 hp1 a0010 c0012 t0001 g0042 EUR FIN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00280 hp2 a0001 c0001 t0014 g0064 EUR FIN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00438 hp1 a0001 c0001 t0001 g0035 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00438 hp2 a0001 c0001 t0029 g0133 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00558 hp1 a0001 c0001 t0001 g0128 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00558 hp2 a0001 c0001 t0001 g0074 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00597 hp1 a0001 c0001 t0001 g0129 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00597 hp2 a0001 c0001 t0001 g0094 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00609 hp1 a0001 c0001 t0001 g0080 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00609 hp2 a0001 c0001 t0007 g0136 EAS CHS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00639 hp1 a0001 c0001 t0002 g0063 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00639 hp2 a0001 c0001 t0013 g0174 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00738 hp1 a0001 c0001 t0001 g0099 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG00738 hp2 a0001 c0001 t0001 g0106 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01069 hp1 a0009 c0010 t0001 g0070 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01069 hp2 a0001 c0001 t0001 g0067 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01071 hp1 a0009 c0010 t0001 g0111 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01071 hp2 a0001 c0001 t0001 g0178 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01081 hp1 a0001 c0001 t0001 g0114 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01081 hp2 a0001 c0001 t0001 g0059 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01099 hp1 a0001 c0001 t0001 g0173 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01099 hp2 a0001 c0001 t0014 g0065 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01106 hp1 a0004 c0007 t0001 g0007 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01106 hp2 a0001 c0001 t0001 g0140 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01167 hp1 a0001 c0001 t0012 g0023 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01167 hp2 a0001 c0001 t0002 g0109 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01168 hp1 a0002 c0003 t0009 g0185 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01168 hp2 a0001 c0001 t0001 g0192 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01175 hp1 a0001 c0001 t0001 g0143 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01175 hp2 a0001 c0001 t0001 g0038 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01243 hp1 a0001 c0001 t0001 g0183 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01243 hp2 a0001 c0001 t0002 g0145 AMR PUR LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01255 hp1 a0001 c0001 t0001 g0045 AMR CLM LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01255 hp2 a0001 c0001 t0001 g0176 AMR CLM LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01261 hp1 a0001 c0001 t0002 g0051 AMR CLM LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01261 hp2 a0001 c0001 t0002 g0066 AMR CLM LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01346 hp1 a0001 c0001 t0001 g0103 AMR CLM LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01346 hp2 a0001 c0001 t0002 g0180 AMR CLM LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01515 hp1 a0001 c0001 t0001 g0005 EUR IBS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01515 hp2 a0007 c0008 t0001 g0047 EUR IBS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01516 hp1 a0001 c0001 t0001 g0170 EUR IBS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01516 hp2 a0001 c0001 t0001 g0049 EUR IBS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01517 hp1 a0007 c0008 t0002 g0048 EUR IBS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01517 hp2 a0001 c0001 t0001 g0171 EUR IBS LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01891 hp1 a0001 c0001 t0011 g0167 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01891 hp2 a0001 c0002 t0006 g0154 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01928 hp1 a0001 c0001 t0001 g0031 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01928 hp2 a0001 c0001 t0001 g0110 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01943 hp1 a0001 c0001 t0001 g0139 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01943 hp2 a0001 c0001 t0001 g0090 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01952 hp1 a0001 c0001 t0001 g0089 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01952 hp2 a0001 c0001 t0001 g0172 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01975 hp1 a0005 c0005 t0018 g0019 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01975 hp2 a0001 c0001 t0001 g0108 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01981 hp1 a0001 c0001 t0002 g0124 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01981 hp2 a0001 c0001 t0002 g0115 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01993 hp1 a0001 c0001 t0001 g0073 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG01993 hp2 a0001 c0001 t0001 g0179 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02004 hp1 a0001 c0001 t0002 g0050 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02004 hp2 a0001 c0001 t0002 g0157 AMR PEL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02015 hp1 a0001 c0001 t0001 g0061 EAS KHV LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02015 hp2 a0001 c0001 t0001 g0075 EAS KHV LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02055 hp1 a0001 c0001 t0001 g0120 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02055 hp2 a0001 c0001 t0005 g0095 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02080 hp1 a0001 c0001 t0001 g0138 EAS KHV LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02080 hp2 a0001 c0001 t0001 g0112 EAS KHV LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02135 hp1 a0001 c0001 t0001 g0119 EAS KHV LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02135 hp2 a0001 c0001 t0001 g0117 EAS KHV LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02145 hp1 a0001 c0001 t0001 g0148 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02145 hp2 a0001 c0001 t0001 g0152 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02257 hp1 a0001 c0001 t0001 g0122 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02257 hp2 a0001 c0002 t0017 g0012 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02258 hp1 a0001 c0001 t0001 g0029 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02258 hp2 a0001 c0001 t0002 g0160 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02280 hp1 a0001 c0001 t0011 g0163 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02280 hp2 a0001 c0001 t0001 g0054 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02615 hp1 a0001 c0001 t0008 g0002 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02615 hp2 a0001 c0001 t0001 g0168 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02622 hp1 a0003 c0004 t0003 g0018 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02622 hp2 a0001 c0001 t0008 g0002 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02647 hp1 a0001 c0001 t0012 g0022 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02647 hp2 a0001 c0001 t0002 g0087 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02698 hp1 a0001 c0001 t0001 g0177 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02698 hp2 a0001 c0001 t0002 g0091 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02717 hp1 a0001 c0001 t0013 g0182 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02717 hp2 a0001 c0001 t0001 g0093 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02723 hp1 a0002 c0003 t0026 g0186 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02723 hp2 a0001 c0001 t0005 g0004 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02809 hp1 a0001 c0001 t0002 g0181 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02809 hp2 a0001 c0013 t0015 g0011 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02818 hp1 a0011 c0015 t0001 g0146 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02818 hp2 a0001 c0001 t0001 g0159 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02886 hp1 a0001 c0001 t0020 g0008 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02886 hp2 a0001 c0001 t0001 g0164 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02922 hp1 a0001 c0001 t0001 g0001 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02922 hp2 a0008 c0009 t0001 g0190 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02965 hp1 a0012 c0014 t0001 g0084 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02965 hp2 a0001 c0001 t0010 g0166 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02976 hp1 a0001 c0001 t0034 g0147 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02976 hp2 a0001 c0001 t0002 g0088 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03098 hp1 a0003 c0004 t0003 g0016 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03098 hp2 a0001 c0002 t0004 g0014 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03139 hp1 a0001 c0002 t0019 g0010 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03139 hp2 a0001 c0002 t0016 g0009 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03195 hp1 a0003 c0004 t0003 g0017 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03195 hp2 a0001 c0001 t0001 g0165 AFR ESN LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03209 hp1 a0008 c0009 t0001 g0189 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03209 hp2 a0005 c0005 t0004 g0003 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03239 hp1 a0001 c0001 t0001 g0046 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03239 hp2 a0001 c0001 t0001 g0021 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03453 hp1 a0001 c0001 t0001 g0158 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03453 hp2 a0001 c0001 t0001 g0150 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03486 hp1 a0001 c0001 t0001 g0001 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03486 hp2 a0001 c0001 t0001 g0033 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03491 hp1 a0001 c0001 t0033 g0078 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03491 hp2 a0001 c0001 t0001 g0077 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03492 hp1 a0001 c0001 t0001 g0076 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03492 hp2 a0001 c0001 t0001 g0069 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03540 hp1 a0001 c0001 t0001 g0001 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03540 hp2 a0005 c0005 t0004 g0003 AFR GWD LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03579 hp1 a0001 c0001 t0001 g0030 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03579 hp2 a0002 c0003 t0022 g0184 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03669 hp1 a0001 c0001 t0001 g0144 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03669 hp2 a0001 c0001 t0001 g0036 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03688 hp1 a0001 c0001 t0001 g0056 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03688 hp2 a0001 c0001 t0001 g0096 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03710 hp1 a0001 c0001 t0001 g0130 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03710 hp2 a0004 c0011 t0001 g0098 SAS PJL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03834 hp1 a0001 c0001 t0001 g0006 SAS BEB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03834 hp2 a0001 c0001 t0030 g0052 SAS BEB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03942 hp1 a0001 c0001 t0031 g0082 SAS BEB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03942 hp2 a0001 c0001 t0001 g0034 SAS BEB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG04115 hp1 a0001 c0001 t0001 g0083 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG04115 hp2 a0001 c0001 t0001 g0040 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG04199 hp1 a0001 c0001 t0002 g0131 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG04199 hp2 a0001 c0001 t0002 g0039 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG04204 hp1 a0004 c0007 t0001 g0007 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG04204 hp2 a0001 c0001 t0001 g0141 SAS STU LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18522 hp1 a0006 c0006 t0025 g0025 AFR YRI LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18522 hp2 a0006 c0006 t0027 g0026 AFR YRI LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18612 hp1 a0001 c0001 t0001 g0127 EAS CHB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18612 hp2 a0001 c0001 t0001 g0107 EAS CHB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18747 hp1 a0001 c0001 t0001 g0081 EAS CHB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18747 hp2 a0001 c0001 t0001 g0105 EAS CHB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18906 hp1 a0001 c0001 t0002 g0151 AFR YRI LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18906 hp2 a0001 c0002 t0006 g0155 AFR YRI LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18945 hp1 a0001 c0001 t0007 g0134 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18945 hp2 a0001 c0001 t0001 g0071 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18948 hp1 a0001 c0001 t0001 g0006 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18948 hp2 a0001 c0001 t0010 g0097 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18949 hp1 a0001 c0001 t0002 g0132 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18949 hp2 a0002 c0003 t0009 g0027 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18952 hp1 a0001 c0001 t0001 g0060 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18952 hp2 a0001 c0001 t0001 g0191 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18975 hp1 a0001 c0001 t0028 g0044 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18975 hp2 a0001 c0001 t0001 g0024 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18983 hp1 a0001 c0001 t0002 g0126 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18983 hp2 a0001 c0001 t0001 g0113 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18984 hp1 a0001 c0001 t0002 g0188 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18984 hp2 a0001 c0001 t0032 g0057 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18995 hp1 a0001 c0001 t0002 g0055 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18995 hp2 a0001 c0001 t0001 g0123 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18998 hp1 a0001 c0001 t0001 g0058 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA18998 hp2 a0002 c0003 t0023 g0187 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19000 hp1 a0002 c0003 t0024 g0028 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19000 hp2 a0001 c0001 t0002 g0092 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19009 hp1 a0014 c0018 t0001 g0037 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19009 hp2 a0013 c0016 t0001 g0118 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19030 hp1 a0001 c0002 t0004 g0013 AFR LWK LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19030 hp2 a0001 c0001 t0001 g0121 AFR LWK LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19043 hp1 a0001 c0001 t0001 g0162 AFR LWK LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19043 hp2 a0001 c0001 t0001 g0149 AFR LWK LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19057 hp1 a0001 c0001 t0001 g0032 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19057 hp2 a0001 c0001 t0001 g0079 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19063 hp1 a0001 c0001 t0002 g0125 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19063 hp2 a0001 c0001 t0002 g0053 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19068 hp1 a0001 c0001 t0007 g0135 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19068 hp2 a0001 c0001 t0002 g0072 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19079 hp1 a0001 c0001 t0001 g0085 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19079 hp2 a0001 c0001 t0035 g0086 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19091 hp1 a0001 c0001 t0001 g0102 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA19091 hp2 a0001 c0001 t0001 g0116 EAS JPT LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA20129 hp1 a0001 c0001 t0001 g0043 AFR ASW LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA20129 hp2 a0001 c0001 t0001 g0175 AFR ASW LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA20905 hp1 a0001 c0001 t0001 g0153 SAS GIH LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
NA20905 hp2 a0001 c0001 t0001 g0137 SAS GIH LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02109 hp1 a0001 c0017 t0001 g0169 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02109 hp2 a0001 c0001 t0001 g0142 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02559 hp1 a0002 c0003 t0021 g0020 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG02559 hp2 a0003 c0004 t0003 g0015 AFR ACB LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03471 hp1 a0001 c0001 t0005 g0041 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG03471 hp2 a0001 c0001 t0001 g0161 AFR MSL LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG06807 hp1 a0001 c0001 t0005 g0004 AFR USA LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
HG06807 hp2 a0001 c0001 t0001 g0068 AFR USA LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0100 REF REF LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156
homoSapiens_grch38 hp1 a0001 c0002 t0006 g0156 REF REF LETM1_chr4_1806479_1861156 LETM1 chr4 1806479 1861156

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr4:1814554 T
T
 C
C
 1 a0012
a0012
 1 HG02965.hp1
HG02965.hp1
 missense_variant MODERATE c.2090A>G
c.2090A>G
 p.Lys697Arg
p.Lys697Arg
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2296/5371 2090/2220 697/739 chr4 1814554
chr4:1815739 T
T
 G
G
 1 a0011
a0011
 1 HG02818.hp1
HG02818.hp1
 missense_variant MODERATE c.1995A>C
c.1995A>C
 p.Glu665Asp
p.Glu665Asp
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/14 2201/5371 1995/2220 665/739 chr4 1815739
chr4:1816841 T
T
 C
C
 1 a0008
a0008
 2 HG02922.hp2
HG03209.hp1
HG02922.hp2
HG03209.hp1
 missense_variant MODERATE c.1817A>G
c.1817A>G
 p.Lys606Arg
p.Lys606Arg
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/14 2023/5371 1817/2220 606/739 chr4 1816841
chr4:1816898 T
T
 C
C
 2 a0002
a0006
a0002
a0006
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 missense_variant MODERATE c.1760A>G
c.1760A>G
 p.Lys587Arg
p.Lys587Arg
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/14 1966/5371 1760/2220 587/739 chr4 1816898
chr4:1819414 T
T
 C
C
 1 a0009
a0009
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 missense_variant MODERATE c.1667A>G
c.1667A>G
 p.Gln556Arg
p.Gln556Arg
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/14 1873/5371 1667/2220 556/739 chr4 1819414
chr4:1822293 C
C
 T
T
 1 a0007
a0007
 2 HG01515.hp2
HG01517.hp1
HG01515.hp2
HG01517.hp1
 missense_variant MODERATE c.1496G>A
c.1496G>A
 p.Arg499His
p.Arg499His
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/14 1702/5371 1496/2220 499/739 chr4 1822293
chr4:1823043 G
G
 A
A
 1 a0013
a0013
 1 NA19009.hp2
NA19009.hp2
 missense_variant MODERATE c.1421C>T
c.1421C>T
 p.Ala474Val
p.Ala474Val
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 9/14 1627/5371 1421/2220 474/739 chr4 1823043
chr4:1834958 G
G
 A
A
 1 a0014
a0014
 1 NA19009.hp1
NA19009.hp1
 missense_variant MODERATE c.763C>T
c.763C>T
 p.Arg255Trp
p.Arg255Trp
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/14 969/5371 763/2220 255/739 chr4 1834958
chr4:1841548 G
G
 T
T
 1 a0010
a0010
 1 HG00280.hp1
HG00280.hp1
 missense_variant MODERATE c.393C>A
c.393C>A
 p.Asn131Lys
p.Asn131Lys
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/14 599/5371 393/2220 131/739 chr4 1841548
chr4:1841597 C
C
 T
T
 1 a0004
a0004
 3 HG01106.hp1
HG03710.hp2
HG04204.hp1
HG01106.hp1
HG03710.hp2
HG04204.hp1
 missense_variant MODERATE c.344G>A
c.344G>A
 p.Arg115His
p.Arg115His
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/14 550/5371 344/2220 115/739 chr4 1841597
chr4:1841793 C
C
 T
T
 1 a0006
a0006
 2 NA18522.hp1
NA18522.hp2
NA18522.hp1
NA18522.hp2
 missense_variant MODERATE c.148G>A
c.148G>A
 p.Val50Ile
p.Val50Ile
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/14 354/5371 148/2220 50/739 chr4 1841793
chr4:1855911 G
G
 A
A
 1 a0003
a0003
 4 HG02559.hp2
HG02622.hp1
HG03098.hp1
others(1): Show 
HG02559.hp2
HG02622.hp1
HG03098.hp1
HG03195.hp1
 missense_variant MODERATE c.40C>T
c.40C>T
 p.Pro14Ser
p.Pro14Ser
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/14 246/5371 40/2220 14/739 chr4 1855911
chr4:1855939 G
G
 C
C
 1 a0005
a0005
 3 HG01975.hp1
HG03209.hp2
HG03540.hp2
HG01975.hp1
HG03209.hp2
HG03540.hp2
 missense_variant MODERATE c.12C>G
c.12C>G
 p.Ile4Met
p.Ile4Met
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/14 218/5371 12/2220 4/739 chr4 1855939

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr4:1816867 C
C
 T
T
 16 a0001c0001
a0001c0013
a0001c0017
others(13): Show 
a0001c0001
a0001c0013
a0001c0017
a0002c0003
a0003c0004
a0004c0007
a0004c0011
a0006c0006
a0007c0008
a0008c0009
a0009c0010
a0010c0012
a0011c0015
a0012c0014
a0013c0016
a0014c0018
 189 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(186): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp1
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03098.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA19000.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 synonymous_variant LOW c.1791G>A
c.1791G>A
 p.Lys597Lys
p.Lys597Lys
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/14 1997/5371 1791/2220 597/739 chr4 1816867
chr4:1832939 T
T
 C
C
 1 a0004c0011
a0004c0011
 1 HG03710.hp2
HG03710.hp2
 synonymous_variant LOW c.885A>G
c.885A>G
 p.Glu295Glu
p.Glu295Glu
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/14 1091/5371 885/2220 295/739 chr4 1832939
chr4:1834887 G
G
 T
T
 1 a0001c0013
a0001c0013
 1 HG02809.hp2
HG02809.hp2
 synonymous_variant LOW c.834C>A
c.834C>A
 p.Ala278Ala
p.Ala278Ala
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/14 1040/5371 834/2220 278/739 chr4 1834887
chr4:1834917 G
G
 A
A
 1 a0001c0017
a0001c0017
 1 HG02109.hp1
HG02109.hp1
 synonymous_variant LOW c.804C>T
c.804C>T
 p.Ile268Ile
p.Ile268Ile
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/14 1010/5371 804/2220 268/739 chr4 1834917
chr4:1836549 G
G
 T
T
 1 a0001c0013
a0001c0013
 1 HG02809.hp2
HG02809.hp2
 synonymous_variant LOW c.618C>A
c.618C>A
 p.Leu206Leu
p.Leu206Leu
 LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/14 824/5371 618/2220 206/739 chr4 1836549

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr4:1811559 C
C
 T
T
 3 a0001c0001t0008
a0001c0013t0015
a0003c0004t0003
a0001c0001t0008
a0001c0013t0015
a0003c0004t0003
 7 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(4): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03195.hp1
 3_prime_UTR_variant MODIFIER c.*2865G>A
c.*2865G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2865 chr4 1811559
chr4:1811587 G
G
 A
A
 2 a0002c0003t0021
a0006c0006t0025
a0002c0003t0021
a0006c0006t0025
 2 HG02559.hp1
NA18522.hp1
HG02559.hp1
NA18522.hp1
 3_prime_UTR_variant MODIFIER c.*2837C>T
c.*2837C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2837 chr4 1811587
chr4:1811606 C
C
 T
T
 1 a0001c0001t0028
a0001c0001t0028
 1 NA18975.hp1
NA18975.hp1
 3_prime_UTR_variant MODIFIER c.*2818G>A
c.*2818G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2818 chr4 1811606
chr4:1811729 A
A
 T
T
 17 a0001c0001t0008
a0001c0002t0004
a0001c0002t0016
others(14): Show 
a0001c0001t0008
a0001c0002t0004
a0001c0002t0016
a0001c0002t0017
a0001c0002t0019
a0001c0013t0015
a0002c0003t0009
a0002c0003t0021
a0002c0003t0022
a0002c0003t0023
a0002c0003t0024
a0002c0003t0026
a0003c0004t0003
a0005c0005t0004
a0005c0005t0018
a0006c0006t0025
a0006c0006t0027
 24 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(21): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 3_prime_UTR_variant MODIFIER c.*2695T>A
c.*2695T>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2695 chr4 1811729
chr4:1811995 G
G
 A
A
 1 a0001c0001t0011
a0001c0001t0011
 2 HG01891.hp1
HG02280.hp1
HG01891.hp1
HG02280.hp1
 3_prime_UTR_variant MODIFIER c.*2429C>T
c.*2429C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2429 chr4 1811995
chr4:1812060 G
G
 A
A
 1 a0001c0001t0005
a0001c0001t0005
 4 HG02055.hp2
HG02723.hp2
HG03471.hp1
others(1): Show 
HG02055.hp2
HG02723.hp2
HG03471.hp1
HG06807.hp1
 3_prime_UTR_variant MODIFIER c.*2364C>T
c.*2364C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2364 chr4 1812060
chr4:1812080 T
T
 C
C
 1 a0001c0001t0012
a0001c0001t0012
 2 HG01167.hp1
HG02647.hp1
HG01167.hp1
HG02647.hp1
 3_prime_UTR_variant MODIFIER c.*2344A>G
c.*2344A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2344 chr4 1812080
chr4:1812190 C
C
 A
A
 2 a0001c0001t0030
a0001c0001t0031
a0001c0001t0030
a0001c0001t0031
 2 HG03834.hp2
HG03942.hp1
HG03834.hp2
HG03942.hp1
 3_prime_UTR_variant MODIFIER c.*2234G>T
c.*2234G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2234 chr4 1812190
chr4:1812198 C
C
 CA
CA
 35 a0001c0001t0001
a0001c0001t0002
a0001c0001t0005
others(32): Show 
a0001c0001t0001
a0001c0001t0002
a0001c0001t0005
a0001c0001t0007
a0001c0001t0008
a0001c0001t0011
a0001c0001t0012
a0001c0001t0014
a0001c0001t0020
a0001c0001t0028
a0001c0001t0030
a0001c0001t0032
a0001c0001t0033
a0001c0001t0034
a0001c0001t0035
a0001c0002t0004
a0001c0002t0016
a0001c0002t0017
a0001c0013t0015
a0001c0017t0001
a0002c0003t0022
a0002c0003t0023
a0004c0007t0001
a0004c0011t0001
a0005c0005t0004
a0005c0005t0018
a0007c0008t0001
a0007c0008t0002
a0008c0009t0001
a0009c0010t0001
a0010c0012t0001
a0011c0015t0001
a0012c0014t0001
a0013c0016t0001
a0014c0018t0001
 179 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(176): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp1
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03098.hp2
HG03139.hp2
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18949.hp1
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*2225dupT
c.*2225dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2225 chr4 1812198
chr4:1812198 C
C
 CAA
CAA
 8 a0001c0001t0013
a0001c0001t0029
a0001c0001t0031
others(5): Show 
a0001c0001t0013
a0001c0001t0029
a0001c0001t0031
a0001c0002t0019
a0002c0003t0021
a0003c0004t0003
a0006c0006t0025
a0006c0006t0027
 12 HG00438.hp2
HG00639.hp2
HG02559.hp1
others(9): Show 
HG00438.hp2
HG00639.hp2
HG02559.hp1
HG02559.hp2
HG02622.hp1
HG02717.hp1
HG03098.hp1
HG03139.hp1
HG03195.hp1
HG03942.hp1
NA18522.hp1
NA18522.hp2
 3_prime_UTR_variant MODIFIER c.*2224_*2225dupTT
c.*2224_*2225dupTT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2225 chr4 1812198
chr4:1812259 G
G
 A
A
 1 a0001c0001t0032
a0001c0001t0032
 1 NA18984.hp2
NA18984.hp2
 3_prime_UTR_variant MODIFIER c.*2165C>T
c.*2165C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2165 chr4 1812259
chr4:1812263 G
G
 A
A
 2 a0001c0001t0007
a0001c0001t0029
a0001c0001t0007
a0001c0001t0029
 4 HG00438.hp2
HG00609.hp2
NA18945.hp1
others(1): Show 
HG00438.hp2
HG00609.hp2
NA18945.hp1
NA19068.hp1
 3_prime_UTR_variant MODIFIER c.*2161C>T
c.*2161C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2161 chr4 1812263
chr4:1812364 CA
CA
 C
C
 33 a0001c0001t0001
a0001c0001t0005
a0001c0001t0007
others(30): Show 
a0001c0001t0001
a0001c0001t0005
a0001c0001t0007
a0001c0001t0008
a0001c0001t0010
a0001c0001t0011
a0001c0001t0012
a0001c0001t0014
a0001c0001t0020
a0001c0001t0028
a0001c0001t0029
a0001c0001t0033
a0001c0001t0035
a0001c0013t0015
a0001c0017t0001
a0002c0003t0009
a0002c0003t0021
a0002c0003t0022
a0002c0003t0023
a0002c0003t0026
a0003c0004t0003
a0004c0007t0001
a0004c0011t0001
a0005c0005t0018
a0006c0006t0025
a0007c0008t0001
a0008c0009t0001
a0009c0010t0001
a0010c0012t0001
a0011c0015t0001
a0012c0014t0001
a0013c0016t0001
a0014c0018t0001
 155 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(152): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01255.hp1
HG01255.hp2
HG01346.hp1
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG03098.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp2
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19068.hp1
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*2059delT
c.*2059delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 2059 chr4 1812364
chr4:1812496 C
C
 T
T
 1 a0001c0013t0015
a0001c0013t0015
 1 HG02809.hp2
HG02809.hp2
 3_prime_UTR_variant MODIFIER c.*1928G>A
c.*1928G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 1928 chr4 1812496
chr4:1812603 A
A
 G
G
 5 a0002c0003t0009
a0002c0003t0022
a0002c0003t0023
others(2): Show 
a0002c0003t0009
a0002c0003t0022
a0002c0003t0023
a0002c0003t0024
a0002c0003t0026
 6 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 3_prime_UTR_variant MODIFIER c.*1821T>C
c.*1821T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 1821 chr4 1812603
chr4:1812658 TGAGGGAG
others(6): Show 
TGAGGGAGAATGAC
 T
T
 4 a0001c0002t0016
a0001c0013t0015
a0002c0003t0021
others(1): Show 
a0001c0002t0016
a0001c0013t0015
a0002c0003t0021
a0006c0006t0025
 4 HG02559.hp1
HG02809.hp2
HG03139.hp2
others(1): Show 
HG02559.hp1
HG02809.hp2
HG03139.hp2
NA18522.hp1
 3_prime_UTR_variant MODIFIER c.*1753_*1765delGTCA
others(9): Show 
c.*1753_*1765delGTCATTCTCCCTC
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 1753 chr4 1812658
chr4:1813184 T
T
 C
C
 1 a0001c0001t0034
a0001c0001t0034
 1 HG02976.hp1
HG02976.hp1
 3_prime_UTR_variant MODIFIER c.*1240A>G
c.*1240A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 1240 chr4 1813184
chr4:1813260 G
G
 A
A
 1 a0001c0001t0014
a0001c0001t0014
 2 HG00280.hp2
HG01099.hp2
HG00280.hp2
HG01099.hp2
 3_prime_UTR_variant MODIFIER c.*1164C>T
c.*1164C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 1164 chr4 1813260
chr4:1813424 C
C
 G
G
 3 a0002c0003t0009
a0002c0003t0023
a0002c0003t0024
a0002c0003t0009
a0002c0003t0023
a0002c0003t0024
 4 HG01168.hp1
NA18949.hp2
NA18998.hp2
others(1): Show 
HG01168.hp1
NA18949.hp2
NA18998.hp2
NA19000.hp1
 3_prime_UTR_variant MODIFIER c.*1000G>C
c.*1000G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 1000 chr4 1813424
chr4:1813800 A
A
 G
G
 1 a0002c0003t0022
a0002c0003t0022
 1 HG03579.hp2
HG03579.hp2
 3_prime_UTR_variant MODIFIER c.*624T>C
c.*624T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 624 chr4 1813800
chr4:1813923 A
A
 C
C
 1 a0001c0002t0017
a0001c0002t0017
 1 HG02257.hp2
HG02257.hp2
 3_prime_UTR_variant MODIFIER c.*501T>G
c.*501T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 501 chr4 1813923
chr4:1814065 G
G
 A
A
 1 a0001c0001t0033
a0001c0001t0033
 1 HG03491.hp1
HG03491.hp1
 3_prime_UTR_variant MODIFIER c.*359C>T
c.*359C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 359 chr4 1814065
chr4:1814157 A
A
 G
G
 42 a0001c0001t0001
a0001c0001t0002
a0001c0001t0005
others(39): Show 
a0001c0001t0001
a0001c0001t0002
a0001c0001t0005
a0001c0001t0007
a0001c0001t0008
a0001c0001t0010
a0001c0001t0011
a0001c0001t0012
a0001c0001t0013
a0001c0001t0014
a0001c0001t0020
a0001c0001t0028
a0001c0001t0029
a0001c0001t0030
a0001c0001t0031
a0001c0001t0032
a0001c0001t0033
a0001c0001t0034
a0001c0001t0035
a0001c0002t0016
a0001c0013t0015
a0001c0017t0001
a0002c0003t0009
a0002c0003t0021
a0002c0003t0022
a0002c0003t0023
a0002c0003t0024
a0002c0003t0026
a0003c0004t0003
a0004c0007t0001
a0004c0011t0001
a0006c0006t0025
a0006c0006t0027
a0007c0008t0001
a0007c0008t0002
a0008c0009t0001
a0009c0010t0001
a0010c0012t0001
a0011c0015t0001
a0012c0014t0001
a0013c0016t0001
a0014c0018t0001
 190 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(187): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp1
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA19000.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*267T>C
c.*267T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 267 chr4 1814157
chr4:1814263 G
G
 A
A
 30 a0001c0001t0001
a0001c0001t0002
a0001c0001t0005
others(27): Show 
a0001c0001t0001
a0001c0001t0002
a0001c0001t0005
a0001c0001t0007
a0001c0001t0010
a0001c0001t0011
a0001c0001t0012
a0001c0001t0013
a0001c0001t0014
a0001c0001t0020
a0001c0001t0028
a0001c0001t0029
a0001c0001t0030
a0001c0001t0031
a0001c0001t0032
a0001c0001t0033
a0001c0001t0034
a0001c0001t0035
a0001c0017t0001
a0004c0007t0001
a0004c0011t0001
a0007c0008t0001
a0007c0008t0002
a0008c0009t0001
a0009c0010t0001
a0010c0012t0001
a0011c0015t0001
a0012c0014t0001
a0013c0016t0001
a0014c0018t0001
 173 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(170): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02615.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*161C>T
c.*161C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 161 chr4 1814263
chr4:1814273 G
G
 A
A
 1 a0001c0001t0034
a0001c0001t0034
 1 HG02976.hp1
HG02976.hp1
 3_prime_UTR_variant MODIFIER c.*151C>T
c.*151C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 151 chr4 1814273
chr4:1814278 T
T
 C
C
 1 a0001c0001t0035
a0001c0001t0035
 1 NA19079.hp2
NA19079.hp2
 3_prime_UTR_variant MODIFIER c.*146A>G
c.*146A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 14/14 146 chr4 1814278
chr4:1856031 G
G
 A
A
 1 a0002c0003t0021
a0002c0003t0021
 1 HG02559.hp1
HG02559.hp1
 5_prime_UTR_variant MODIFIER c.-81C>T
c.-81C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/14 81 chr4 1856031
chr4:1856096 C
C
 G
G
 11 a0001c0001t0008
a0001c0001t0020
a0001c0002t0004
others(8): Show 
a0001c0001t0008
a0001c0001t0020
a0001c0002t0004
a0001c0002t0016
a0001c0002t0017
a0001c0002t0019
a0001c0013t0015
a0002c0003t0021
a0003c0004t0003
a0005c0005t0004
a0005c0005t0018
 17 HG01975.hp1
HG02257.hp2
HG02559.hp1
others(14): Show 
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 5_prime_UTR_variant MODIFIER c.-146G>C
c.-146G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/14 146 chr4 1856096

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr4:1814645 C
C
 T
T
 9 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
others(6): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.2071-72G>A
c.2071-72G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1814645
chr4:1814963 T
T
 C
C
 167 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(164): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0049
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0142
a0001c0001t0001g0143
a0001c0001t0001g0144
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0168
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0002g0039
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0053
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0066
a0001c0001t0002g0072
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0124
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0145
a0001c0001t0002g0151
a0001c0001t0002g0157
a0001c0001t0002g0160
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0188
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0010g0097
a0001c0001t0010g0166
a0001c0001t0011g0163
a0001c0001t0011g0167
a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0013g0174
a0001c0001t0013g0182
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0020g0008
a0001c0001t0028g0044
a0001c0001t0029g0133
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0032g0057
a0001c0001t0033g0078
a0001c0001t0034g0147
a0001c0001t0035g0086
a0001c0017t0001g0169
a0004c0007t0001g0007
a0004c0011t0001g0098
a0007c0008t0001g0047
a0007c0008t0002g0048
a0008c0009t0001g0189
a0008c0009t0001g0190
a0009c0010t0001g0070
a0009c0010t0001g0111
a0010c0012t0001g0042
a0011c0015t0001g0146
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 173 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(170): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02615.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.2071-390A>G
c.2071-390A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1814963
chr4:1815052 C
C
 T
T
 1 a0001c0001t0001g0049
a0001c0001t0001g0049
 1 HG01516.hp2
HG01516.hp2
 intron_variant MODIFIER c.2071-479G>A
c.2071-479G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1815052
chr4:1815154 G
G
 C
C
 3 a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 3 HG02559.hp1
NA18522.hp1
NA18522.hp2
HG02559.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.2070+510C>G
c.2070+510C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1815154
chr4:1815205 C
C
 A
A
 1 a0001c0001t0001g0069
a0001c0001t0001g0069
 1 HG03492.hp2
HG03492.hp2
 intron_variant MODIFIER c.2070+459G>T
c.2070+459G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1815205
chr4:1815452 A
A
 G
G
 1 a0001c0001t0001g0159
a0001c0001t0001g0159
 1 HG02818.hp2
HG02818.hp2
 intron_variant MODIFIER c.2070+212T>C
c.2070+212T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1815452
chr4:1815509 C
C
 T
T
 6 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(3): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 6 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.2070+155G>A
c.2070+155G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1815509
chr4:1815655 G
G
 A
A
 1 a0001c0001t0005g0041
a0001c0001t0005g0041
 1 HG03471.hp1
HG03471.hp1
 intron_variant MODIFIER c.2070+9C>T
c.2070+9C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 13/13 chr4 1815655
chr4:1815831 C
C
 T
T
 1 a0001c0001t0002g0151
a0001c0001t0002g0151
 1 NA18906.hp1
NA18906.hp1
 intron_variant MODIFIER c.1932-29G>A
c.1932-29G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1815831
chr4:1815876 G
G
 A
A
 3 a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 3 HG02559.hp1
NA18522.hp1
NA18522.hp2
HG02559.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.1932-74C>T
c.1932-74C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1815876
chr4:1816113 G
G
 A
A
 1 a0001c0001t0001g0144
a0001c0001t0001g0144
 1 HG03669.hp1
HG03669.hp1
 intron_variant MODIFIER c.1932-311C>T
c.1932-311C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1816113
chr4:1816243 TG
TG
 T
T
 182 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(179): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0049
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0142
a0001c0001t0001g0143
a0001c0001t0001g0144
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0168
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0002g0039
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0053
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0066
a0001c0001t0002g0072
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0124
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0145
a0001c0001t0002g0151
a0001c0001t0002g0157
a0001c0001t0002g0160
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0188
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0008g0002
a0001c0001t0010g0097
a0001c0001t0010g0166
a0001c0001t0011g0163
a0001c0001t0011g0167
a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0013g0174
a0001c0001t0013g0182
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0020g0008
a0001c0001t0028g0044
a0001c0001t0029g0133
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0032g0057
a0001c0001t0033g0078
a0001c0001t0034g0147
a0001c0001t0035g0086
a0001c0013t0015g0011
a0001c0017t0001g0169
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0004c0007t0001g0007
a0004c0011t0001g0098
a0006c0006t0025g0025
a0006c0006t0027g0026
a0007c0008t0001g0047
a0007c0008t0002g0048
a0008c0009t0001g0189
a0008c0009t0001g0190
a0009c0010t0001g0070
a0009c0010t0001g0111
a0010c0012t0001g0042
a0011c0015t0001g0146
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 189 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(186): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp1
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03098.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA19000.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1932-442delC
c.1932-442delC
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1816243
chr4:1816340 A
A
 C
C
 8 a0001c0001t0001g0024
a0001c0001t0001g0032
a0001c0001t0001g0113
others(5): Show 
a0001c0001t0001g0024
a0001c0001t0001g0032
a0001c0001t0001g0113
a0001c0001t0001g0123
a0001c0001t0001g0138
a0001c0001t0002g0132
a0001c0001t0010g0097
a0013c0016t0001g0118
 8 HG02080.hp1
NA18948.hp2
NA18949.hp1
others(5): Show 
HG02080.hp1
NA18948.hp2
NA18949.hp1
NA18975.hp2
NA18983.hp2
NA18995.hp2
NA19009.hp2
NA19057.hp1
 intron_variant MODIFIER c.1931+387T>G
c.1931+387T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1816340
chr4:1816560 T
T
 C
C
 1 a0001c0001t0001g0177
a0001c0001t0001g0177
 1 HG02698.hp1
HG02698.hp1
 intron_variant MODIFIER c.1931+167A>G
c.1931+167A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1816560
chr4:1816624 A
A
 G
G
 2 a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0030g0052
a0001c0001t0031g0082
 2 HG03834.hp2
HG03942.hp1
HG03834.hp2
HG03942.hp1
 intron_variant MODIFIER c.1931+103T>C
c.1931+103T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1816624
chr4:1816707 G
G
 A
A
 2 a0001c0001t0001g0080
a0001c0001t0001g0119
a0001c0001t0001g0080
a0001c0001t0001g0119
 2 HG00609.hp1
HG02135.hp1
HG00609.hp1
HG02135.hp1
 intron_variant MODIFIER c.1931+20C>T
c.1931+20C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 12/13 chr4 1816707
chr4:1816918 A
A
 G
G
 1 a0002c0003t0022g0184
a0002c0003t0022g0184
 1 HG03579.hp2
HG03579.hp2
 splice_region_variant&intron_variant LOW c.1744-4T>C
c.1744-4T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1816918
chr4:1816993 C
C
 G
G
 2 a0001c0001t0001g0054
a0001c0001t0001g0122
a0001c0001t0001g0054
a0001c0001t0001g0122
 2 HG02257.hp1
HG02280.hp2
HG02257.hp1
HG02280.hp2
 intron_variant MODIFIER c.1744-79G>C
c.1744-79G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1816993
chr4:1817021 G
G
 A
A
 1 a0001c0001t0008g0002
a0001c0001t0008g0002
 2 HG02615.hp1
HG02622.hp2
HG02615.hp1
HG02622.hp2
 intron_variant MODIFIER c.1744-107C>T
c.1744-107C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817021
chr4:1817245 CA
CA
 C
C
 159 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(156): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0142
a0001c0001t0001g0144
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0165
a0001c0001t0001g0168
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0002g0039
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0053
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0066
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0124
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0145
a0001c0001t0002g0151
a0001c0001t0002g0157
a0001c0001t0002g0160
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0188
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0010g0166
a0001c0001t0011g0163
a0001c0001t0013g0174
a0001c0001t0013g0182
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0029g0133
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0032g0057
a0001c0001t0033g0078
a0001c0001t0035g0086
a0001c0017t0001g0169
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0004c0007t0001g0007
a0004c0011t0001g0098
a0006c0006t0025g0025
a0006c0006t0027g0026
a0007c0008t0001g0047
a0007c0008t0002g0048
a0008c0009t0001g0189
a0008c0009t0001g0190
a0009c0010t0001g0070
a0010c0012t0001g0042
a0011c0015t0001g0146
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 165 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(162): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp2
HG01168.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01517.hp1
HG01517.hp2
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02559.hp1
HG02615.hp2
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp2
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18949.hp1
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1744-332delT
c.1744-332delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817245
chr4:1817245 CAA
CAA
 C
C
 12 a0001c0001t0001g0081
a0001c0001t0001g0192
a0001c0001t0002g0072
others(9): Show 
a0001c0001t0001g0081
a0001c0001t0001g0192
a0001c0001t0002g0072
a0001c0001t0008g0002
a0001c0001t0010g0097
a0001c0001t0034g0147
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 13 HG01168.hp2
HG02559.hp2
HG02615.hp1
others(10): Show 
HG01168.hp2
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG02976.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
NA18747.hp1
NA18948.hp2
NA19068.hp2
 intron_variant MODIFIER c.1744-333_1744-332d
others(4): Show 
c.1744-333_1744-332delTT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817245
chr4:1817258 A
A
 C
C
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG00438.hp1
HG00438.hp1
 intron_variant MODIFIER c.1744-344T>G
c.1744-344T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817258
chr4:1817380 G
G
 A
A
 1 a0001c0001t0001g0172
a0001c0001t0001g0172
 1 HG01952.hp2
HG01952.hp2
 intron_variant MODIFIER c.1744-466C>T
c.1744-466C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817380
chr4:1817564 C
C
 G
G
 3 a0001c0001t0001g0093
a0001c0001t0001g0183
a0001c0001t0002g0181
a0001c0001t0001g0093
a0001c0001t0001g0183
a0001c0001t0002g0181
 3 HG01243.hp1
HG02717.hp2
HG02809.hp1
HG01243.hp1
HG02717.hp2
HG02809.hp1
 intron_variant MODIFIER c.1744-650G>C
c.1744-650G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817564
chr4:1817710 G
G
 A
A
 1 a0001c0001t0001g0130
a0001c0001t0001g0130
 1 HG03710.hp1
HG03710.hp1
 intron_variant MODIFIER c.1744-796C>T
c.1744-796C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817710
chr4:1817914 G
G
 A
A
 1 a0001c0001t0001g0021
a0001c0001t0001g0021
 1 HG03239.hp2
HG03239.hp2
 intron_variant MODIFIER c.1744-1000C>T
c.1744-1000C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817914
chr4:1817993 C
C
 T
T
 1 a0002c0003t0026g0186
a0002c0003t0026g0186
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.1744-1079G>A
c.1744-1079G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1817993
chr4:1818127 C
C
 T
T
 1 a0001c0001t0002g0181
a0001c0001t0002g0181
 1 HG02809.hp1
HG02809.hp1
 intron_variant MODIFIER c.1743+1211G>A
c.1743+1211G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1818127
chr4:1818324 G
G
 A
A
 3 a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0020g0008
a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0020g0008
 3 HG01167.hp1
HG02647.hp1
HG02886.hp1
HG01167.hp1
HG02647.hp1
HG02886.hp1
 intron_variant MODIFIER c.1743+1014C>T
c.1743+1014C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1818324
chr4:1819076 C
C
 T
T
 1 a0001c0001t0001g0038
a0001c0001t0001g0038
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.1743+262G>A
c.1743+262G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1819076
chr4:1819083 C
C
 CA
CA
 6 a0001c0001t0001g0110
a0001c0001t0002g0092
a0001c0001t0002g0131
others(3): Show 
a0001c0001t0001g0110
a0001c0001t0002g0092
a0001c0001t0002g0131
a0001c0001t0030g0052
a0001c0001t0031g0082
a0009c0010t0001g0111
 6 HG01071.hp1
HG01928.hp2
HG03834.hp2
others(3): Show 
HG01071.hp1
HG01928.hp2
HG03834.hp2
HG03942.hp1
HG04199.hp1
NA19000.hp2
 intron_variant MODIFIER c.1743+254dupT
c.1743+254dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1819083
chr4:1819109 C
C
 T
T
 9 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
others(6): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1743+229G>A
c.1743+229G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 11/13 chr4 1819109
chr4:1819562 C
C
 T
T
 2 a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0012g0022
a0001c0001t0012g0023
 2 HG01167.hp1
HG02647.hp1
HG01167.hp1
HG02647.hp1
 intron_variant MODIFIER c.1609-90G>A
c.1609-90G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1819562
chr4:1819563 G
G
 A
A
 7 a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
others(4): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(5): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.1609-91C>T
c.1609-91C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1819563
chr4:1819613 C
C
 T
T
 1 a0001c0001t0002g0145
a0001c0001t0002g0145
 1 HG01243.hp2
HG01243.hp2
 intron_variant MODIFIER c.1609-141G>A
c.1609-141G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1819613
chr4:1819638 G
G
 A
A
 1 a0001c0001t0001g0164
a0001c0001t0001g0164
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.1609-166C>T
c.1609-166C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1819638
chr4:1819772 T
T
 G
G
 7 a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
others(4): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(5): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.1609-300A>C
c.1609-300A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1819772
chr4:1819887 G
G
 A
A
 1 a0001c0001t0001g0045
a0001c0001t0001g0045
 1 HG01255.hp1
HG01255.hp1
 intron_variant MODIFIER c.1609-415C>T
c.1609-415C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1819887
chr4:1819924 C
C
 T
T
 1 a0001c0001t0001g0056
a0001c0001t0001g0056
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.1609-452G>A
c.1609-452G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1819924
chr4:1820178 C
C
 T
T
 1 a0001c0001t0001g0191
a0001c0001t0001g0191
 1 NA18952.hp2
NA18952.hp2
 intron_variant MODIFIER c.1609-706G>A
c.1609-706G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1820178
chr4:1820837 A
A
 G
G
 3 a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 3 HG02559.hp1
NA18522.hp1
NA18522.hp2
HG02559.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.1608+1344T>C
c.1608+1344T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1820837
chr4:1821003 C
C
 A
A
 164 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(161): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0049
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0142
a0001c0001t0001g0143
a0001c0001t0001g0144
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0168
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0002g0039
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0053
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0066
a0001c0001t0002g0072
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0124
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0145
a0001c0001t0002g0151
a0001c0001t0002g0157
a0001c0001t0002g0160
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0188
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0010g0097
a0001c0001t0010g0166
a0001c0001t0011g0163
a0001c0001t0011g0167
a0001c0001t0013g0174
a0001c0001t0013g0182
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0028g0044
a0001c0001t0029g0133
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0032g0057
a0001c0001t0033g0078
a0001c0001t0034g0147
a0001c0001t0035g0086
a0001c0017t0001g0169
a0004c0007t0001g0007
a0004c0011t0001g0098
a0007c0008t0001g0047
a0007c0008t0002g0048
a0008c0009t0001g0189
a0008c0009t0001g0190
a0009c0010t0001g0070
a0009c0010t0001g0111
a0010c0012t0001g0042
a0011c0015t0001g0146
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 170 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(167): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02615.hp2
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03195.hp2
HG03209.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1608+1178G>T
c.1608+1178G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1821003
chr4:1821123 A
A
 AT
AT
 8 a0001c0001t0001g0005
a0001c0001t0001g0029
a0001c0001t0001g0030
others(5): Show 
a0001c0001t0001g0005
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0107
a0001c0001t0002g0092
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG00140.hp2
HG01515.hp1
HG02258.hp1
others(6): Show 
HG00140.hp2
HG01515.hp1
HG02258.hp1
HG02559.hp1
HG03579.hp1
NA18522.hp1
NA18522.hp2
NA18612.hp2
NA19000.hp2
 intron_variant MODIFIER c.1608+1057dupA
c.1608+1057dupA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1821123
chr4:1821128 T
T
 G
G
 6 a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
others(3): Show 
a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 7 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(4): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03195.hp1
 intron_variant MODIFIER c.1608+1053A>C
c.1608+1053A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1821128
chr4:1821219 A
A
 G
G
 2 a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0029
a0001c0001t0001g0030
 2 HG02258.hp1
HG03579.hp1
HG02258.hp1
HG03579.hp1
 intron_variant MODIFIER c.1608+962T>C
c.1608+962T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1821219
chr4:1821261 T
T
 C
C
 3 a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 3 HG02559.hp1
NA18522.hp1
NA18522.hp2
HG02559.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.1608+920A>G
c.1608+920A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1821261
chr4:1821300 G
G
 A
A
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.1608+881C>T
c.1608+881C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1821300
chr4:1821465 G
G
 A
A
 1 a0001c0001t0001g0061
a0001c0001t0001g0061
 1 HG02015.hp1
HG02015.hp1
 intron_variant MODIFIER c.1608+716C>T
c.1608+716C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 10/13 chr4 1821465
chr4:1822339 G
G
 A
A
 9 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
others(6): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1477-27C>T
c.1477-27C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 9/13 chr4 1822339
chr4:1822345 G
G
 A
A
 1 a0001c0001t0001g0056
a0001c0001t0001g0056
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.1477-33C>T
c.1477-33C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 9/13 chr4 1822345
chr4:1822637 C
C
 T
T
 166 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(163): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0049
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0142
a0001c0001t0001g0143
a0001c0001t0001g0144
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0168
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0183
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0002g0039
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0066
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0124
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0145
a0001c0001t0002g0151
a0001c0001t0002g0157
a0001c0001t0002g0160
a0001c0001t0002g0180
a0001c0001t0002g0181
a0001c0001t0002g0188
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0010g0097
a0001c0001t0010g0166
a0001c0001t0011g0163
a0001c0001t0011g0167
a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0013g0174
a0001c0001t0013g0182
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0020g0008
a0001c0001t0028g0044
a0001c0001t0029g0133
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0033g0078
a0001c0001t0034g0147
a0001c0001t0035g0086
a0001c0002t0006g0155
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0017t0001g0169
a0004c0007t0001g0007
a0004c0011t0001g0098
a0005c0005t0004g0003
a0005c0005t0018g0019
a0007c0008t0001g0047
a0007c0008t0002g0048
a0008c0009t0001g0189
a0008c0009t0001g0190
a0009c0010t0001g0070
a0009c0010t0001g0111
a0010c0012t0001g0042
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 173 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(170): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp1
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02615.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18906.hp2
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19068.hp1
NA19079.hp1
NA19079.hp2
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1477-325G>A
c.1477-325G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 9/13 chr4 1822637
chr4:1822658 CTGGGGGA
others(51): Show 
CTGGGGGAGCCTGCAGCTCCTCTGCCAGCGCCCCTCACAGCAAGTCCCTG
AGGAGAGGG
 C
C
 1 a0001c0001t0001g0046
a0001c0001t0001g0046
 1 HG03239.hp1
HG03239.hp1
 intron_variant MODIFIER c.1476+272_1476+329d
others(60): Show 
c.1476+272_1476+329delCCCTCTCCTCAGGGACTTGCTGTGAGGG
GCGCTGGCAGAGGAGCTGCAGGCTCCCCCA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 9/13 chr4 1822658
chr4:1822759 A
A
 C
C
 1 a0001c0002t0019g0010
a0001c0002t0019g0010
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1476+229T>G
c.1476+229T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 9/13 chr4 1822759
chr4:1822923 C
C
 T
T
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.1476+65G>A
c.1476+65G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 9/13 chr4 1822923
chr4:1823314 CGCTCGCC
others(26): Show 
CGCTCGCCCGATGACTCCTGACATGTGGGAAGGA
 C
C
 5 a0002c0003t0009g0027
a0002c0003t0022g0184
a0002c0003t0023g0187
others(2): Show 
a0002c0003t0009g0027
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 5 HG02723.hp1
HG03579.hp2
NA18949.hp2
others(2): Show 
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1333-216_1333-184d
others(35): Show 
c.1333-216_1333-184delTCCTTCCCACATGTCAGGAGTCATCGGG
CGAGC
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 8/13 chr4 1823314
chr4:1823381 C
C
 T
T
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.1333-250G>A
c.1333-250G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 8/13 chr4 1823381
chr4:1823518 G
G
 T
T
 1 a0001c0001t0002g0072
a0001c0001t0002g0072
 1 NA19068.hp2
NA19068.hp2
 intron_variant MODIFIER c.1332+126C>A
c.1332+126C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 8/13 chr4 1823518
chr4:1823617 G
G
 A
A
 1 a0001c0001t0002g0072
a0001c0001t0002g0072
 1 NA19068.hp2
NA19068.hp2
 intron_variant MODIFIER c.1332+27C>T
c.1332+27C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 8/13 chr4 1823617
chr4:1823792 G
G
 C
C
 1 a0006c0006t0027g0026
a0006c0006t0027g0026
 1 NA18522.hp2
NA18522.hp2
 intron_variant MODIFIER c.1201-17C>G
c.1201-17C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1823792
chr4:1824169 A
A
 G
G
 1 a0001c0001t0001g0105
a0001c0001t0001g0105
 1 NA18747.hp2
NA18747.hp2
 intron_variant MODIFIER c.1201-394T>C
c.1201-394T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1824169
chr4:1824270 G
G
 A
A
 7 a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
others(4): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(5): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.1201-495C>T
c.1201-495C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1824270
chr4:1824508 G
G
 A
A
 7 a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
others(4): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(5): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.1201-733C>T
c.1201-733C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1824508
chr4:1824662 C
C
 G
G
 1 a0001c0002t0017g0012
a0001c0002t0017g0012
 1 HG02257.hp2
HG02257.hp2
 intron_variant MODIFIER c.1201-887G>C
c.1201-887G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1824662
chr4:1824907 C
C
 T
T
 1 a0001c0001t0001g0117
a0001c0001t0001g0117
 1 HG02135.hp2
HG02135.hp2
 intron_variant MODIFIER c.1200+657G>A
c.1200+657G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1824907
chr4:1825087 G
G
 T
T
 3 a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
 3 HG00558.hp1
HG00597.hp1
NA18612.hp1
HG00558.hp1
HG00597.hp1
NA18612.hp1
 intron_variant MODIFIER c.1200+477C>A
c.1200+477C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1825087
chr4:1825530 GTGCCGGC
others(18): Show 
GTGCCGGCCTGGCACCAGGCCAATAT
 G
G
 1 a0001c0001t0001g0175
a0001c0001t0001g0175
 1 NA20129.hp2
NA20129.hp2
 intron_variant MODIFIER c.1200+9_1200+33delA
others(24): Show 
c.1200+9_1200+33delATATTGGCCTGGTGCCAGGCCGGCA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 7/13 chr4 1825530
chr4:1826148 G
G
 A
A
 2 a0001c0001t0001g0062
a0001c0001t0002g0063
a0001c0001t0001g0062
a0001c0001t0002g0063
 2 HG00140.hp1
HG00639.hp1
HG00140.hp1
HG00639.hp1
 intron_variant MODIFIER c.1081-465C>T
c.1081-465C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826148
chr4:1826380 C
C
 T
T
 1 a0001c0001t0002g0050
a0001c0001t0002g0050
 1 HG02004.hp1
HG02004.hp1
 intron_variant MODIFIER c.1081-697G>A
c.1081-697G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826380
chr4:1826585 T
T
 G
G
 1 a0001c0001t0001g0123
a0001c0001t0001g0123
 1 NA18995.hp2
NA18995.hp2
 intron_variant MODIFIER c.1081-902A>C
c.1081-902A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826585
chr4:1826601 G
G
 A
A
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.1081-918C>T
c.1081-918C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826601
chr4:1826642 G
G
 A
A
 1 a0001c0001t0001g0034
a0001c0001t0001g0034
 1 HG03942.hp2
HG03942.hp2
 intron_variant MODIFIER c.1081-959C>T
c.1081-959C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826642
chr4:1826679 A
A
 G
G
 1 a0001c0001t0001g0043
a0001c0001t0001g0043
 1 NA20129.hp1
NA20129.hp1
 intron_variant MODIFIER c.1081-996T>C
c.1081-996T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826679
chr4:1826920 C
C
 T
T
 1 a0001c0001t0001g0179
a0001c0001t0001g0179
 1 HG01993.hp2
HG01993.hp2
 intron_variant MODIFIER c.1081-1237G>A
c.1081-1237G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826920
chr4:1826930 T
T
 C
C
 1 a0001c0001t0002g0063
a0001c0001t0002g0063
 1 HG00639.hp1
HG00639.hp1
 intron_variant MODIFIER c.1081-1247A>G
c.1081-1247A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826930
chr4:1826948 G
G
 C
C
 1 a0001c0002t0016g0009
a0001c0002t0016g0009
 1 HG03139.hp2
HG03139.hp2
 intron_variant MODIFIER c.1081-1265C>G
c.1081-1265C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826948
chr4:1826967 TGTCGCCT
others(11): Show 
TGTCGCCTCCACTCGCATC
 T
T
 1 a0001c0001t0002g0160
a0001c0001t0002g0160
 1 HG02258.hp2
HG02258.hp2
 intron_variant MODIFIER c.1081-1302_1081-128
others(22): Show 
c.1081-1302_1081-1285delGATGCGAGTGGAGGCGAC
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826967
chr4:1826989 G
G
 A
A
 1 a0001c0001t0001g0142
a0001c0001t0001g0142
 1 HG02109.hp2
HG02109.hp2
 intron_variant MODIFIER c.1081-1306C>T
c.1081-1306C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1826989
chr4:1827140 C
C
 T
T
 7 a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
others(4): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(5): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.1081-1457G>A
c.1081-1457G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827140
chr4:1827171 G
G
 A
A
 1 a0001c0001t0011g0167
a0001c0001t0011g0167
 1 HG01891.hp1
HG01891.hp1
 intron_variant MODIFIER c.1081-1488C>T
c.1081-1488C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827171
chr4:1827274 C
C
 CT
CT
 5 a0001c0001t0001g0117
a0001c0001t0001g0120
a0001c0001t0002g0131
others(2): Show 
a0001c0001t0001g0117
a0001c0001t0001g0120
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0002t0006g0154
 5 HG01891.hp2
HG02055.hp1
HG02135.hp2
others(2): Show 
HG01891.hp2
HG02055.hp1
HG02135.hp2
HG04199.hp1
NA18949.hp1
 intron_variant MODIFIER c.1081-1592dupA
c.1081-1592dupA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827274
chr4:1827274 CT
CT
 C
C
 32 a0001c0001t0001g0006
a0001c0001t0001g0032
a0001c0001t0001g0049
others(29): Show 
a0001c0001t0001g0006
a0001c0001t0001g0032
a0001c0001t0001g0049
a0001c0001t0001g0074
a0001c0001t0001g0077
a0001c0001t0001g0090
a0001c0001t0001g0102
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0162
a0001c0001t0001g0168
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0179
a0001c0001t0001g0192
a0001c0001t0002g0055
a0001c0001t0008g0002
a0001c0001t0010g0097
a0001c0001t0010g0166
a0001c0001t0030g0052
a0001c0002t0017g0012
a0001c0002t0019g0010
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0027g0026
 35 HG00558.hp1
HG00558.hp2
HG01168.hp1
others(32): Show 
HG00558.hp1
HG00558.hp2
HG01168.hp1
HG01168.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp2
HG01943.hp2
HG01975.hp1
HG01993.hp2
HG02257.hp2
HG02559.hp1
HG02615.hp1
HG02615.hp2
HG02622.hp2
HG02723.hp1
HG02965.hp2
HG03139.hp1
HG03209.hp2
HG03491.hp2
HG03540.hp2
HG03579.hp2
HG03834.hp1
HG03834.hp2
NA18522.hp2
NA18612.hp1
NA18948.hp1
NA18948.hp2
NA18949.hp2
NA18995.hp1
NA18998.hp2
NA19000.hp1
NA19043.hp1
NA19057.hp1
NA19091.hp1
 intron_variant MODIFIER c.1081-1592delA
c.1081-1592delA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827274
chr4:1827274 CTT
CTT
 C
C
 9 a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
others(6): Show 
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0006c0006t0025g0025
 9 HG02559.hp2
HG02622.hp1
HG02809.hp2
others(6): Show 
HG02559.hp2
HG02622.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03195.hp1
NA18522.hp1
NA19030.hp1
 intron_variant MODIFIER c.1081-1593_1081-159
others(6): Show 
c.1081-1593_1081-1592delAA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827274
chr4:1827286 T
T
 C
C
 2 a0001c0001t0001g0079
a0001c0001t0001g0094
a0001c0001t0001g0079
a0001c0001t0001g0094
 2 HG00597.hp2
NA19057.hp2
HG00597.hp2
NA19057.hp2
 intron_variant MODIFIER c.1081-1603A>G
c.1081-1603A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827286
chr4:1827422 A
A
 G
G
 1 a0001c0001t0001g0165
a0001c0001t0001g0165
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.1081-1739T>C
c.1081-1739T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827422
chr4:1827430 C
C
 T
T
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.1081-1747G>A
c.1081-1747G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827430
chr4:1827495 C
C
 T
T
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.1081-1812G>A
c.1081-1812G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827495
chr4:1827521 T
T
 C
C
 1 a0001c0001t0002g0126
a0001c0001t0002g0126
 1 NA18983.hp1
NA18983.hp1
 intron_variant MODIFIER c.1081-1838A>G
c.1081-1838A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827521
chr4:1827791 A
A
 T
T
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.1081-2108T>A
c.1081-2108T>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827791
chr4:1827877 GC
GC
 G
G
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.1081-2195delG
c.1081-2195delG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827877
chr4:1827909 T
T
 C
C
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.1081-2226A>G
c.1081-2226A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827909
chr4:1827928 C
C
 G
G
 1 a0003c0004t0003g0017
a0003c0004t0003g0017
 1 HG03195.hp1
HG03195.hp1
 intron_variant MODIFIER c.1081-2245G>C
c.1081-2245G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827928
chr4:1827941 C
C
 T
T
 1 a0001c0002t0016g0009
a0001c0002t0016g0009
 1 HG03139.hp2
HG03139.hp2
 intron_variant MODIFIER c.1081-2258G>A
c.1081-2258G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827941
chr4:1827942 G
G
 A
A
 2 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0004g0013
a0001c0002t0004g0014
 2 HG03098.hp2
NA19030.hp1
HG03098.hp2
NA19030.hp1
 intron_variant MODIFIER c.1081-2259C>T
c.1081-2259C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827942
chr4:1827996 G
G
 A
A
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.1081-2313C>T
c.1081-2313C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1827996
chr4:1828013 A
A
 ACC
ACC
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.1081-2331_1081-233
others(6): Show 
c.1081-2331_1081-2330insGG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828013
chr4:1828014 A
A
 C
C
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.1081-2331T>G
c.1081-2331T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828014
chr4:1828052 CCCCCCAC
others(43): Show 
CCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGAC
A
 C
C
 3 a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0002g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0002g0160
 3 HG02258.hp2
HG03471.hp2
NA19043.hp1
HG02258.hp2
HG03471.hp2
NA19043.hp1
 intron_variant MODIFIER c.1081-2419_1081-237
others(54): Show 
c.1081-2419_1081-2370delTGTCAGCCCCCCTGCCCGGCCAGCCG
CCCCGTCCGGGAGGGAGGTGGGGG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828052
chr4:1828073 G
G
 A
A
 9 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
others(6): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1081-2390C>T
c.1081-2390C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828073
chr4:1828095 G
G
 C
C
 1 a0001c0001t0001g0164
a0001c0001t0001g0164
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.1081-2412C>G
c.1081-2412C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828095
chr4:1828109 C
C
 T
T
 1 a0014c0018t0001g0037
a0014c0018t0001g0037
 1 NA19009.hp1
NA19009.hp1
 intron_variant MODIFIER c.1081-2426G>A
c.1081-2426G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828109
chr4:1828201 G
G
 A
A
 6 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(3): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 6 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1081-2518C>T
c.1081-2518C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828201
chr4:1828229 A
A
 G
G
 2 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0004g0013
a0001c0002t0004g0014
 2 HG03098.hp2
NA19030.hp1
HG03098.hp2
NA19030.hp1
 intron_variant MODIFIER c.1081-2546T>C
c.1081-2546T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828229
chr4:1828271 GGGGGGCT
others(42): Show 
GGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCA
 G
G
 3 a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 3 HG02559.hp1
NA18522.hp1
NA18522.hp2
HG02559.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.1081-2637_1081-258
others(53): Show 
c.1081-2637_1081-2589delTGCCCGGCCAGCCGCCCCGTCCGGGA
GGGAGGTGGGGGGGTCAGCCCCC
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828271
chr4:1828298 C
C
 T
T
 2 a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0099
a0001c0001t0001g0100
 2 HG00738.hp1
homoSapiens_chm13v2.hp1
HG00738.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1081-2615G>A
c.1081-2615G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828298
chr4:1828302 C
C
 T
T
 14 a0001c0001t0001g0033
a0001c0001t0001g0043
a0001c0001t0001g0049
others(11): Show 
a0001c0001t0001g0033
a0001c0001t0001g0043
a0001c0001t0001g0049
a0001c0001t0001g0056
a0001c0001t0001g0059
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0137
a0001c0001t0001g0140
a0001c0001t0001g0144
a0001c0001t0002g0066
 14 HG01069.hp2
HG01081.hp2
HG01106.hp2
others(11): Show 
HG01069.hp2
HG01081.hp2
HG01106.hp2
HG01261.hp2
HG01516.hp2
HG02055.hp1
HG03486.hp2
HG03492.hp2
HG03669.hp1
HG03688.hp1
HG06807.hp2
NA19030.hp2
NA20129.hp1
NA20905.hp2
 intron_variant MODIFIER c.1081-2619G>A
c.1081-2619G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828302
chr4:1828316 GGGCAGGG
others(1014): Show 
GGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGC
CGGGCGGGGGGCTGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCC
GGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCC
CCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCC
CCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCC
CCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACT
TCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCCCACCTCCCGGACGGGGC
AGCTGGCTGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGATGGGGCG
GCTGGCCGGGCAGAGGGGCTCCCCACTTCCCAGCAGGGGCGGCCGGGCAG
AGGCGCCCCCCACCCCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGA
CCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGAGGCTGA
CACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCC
TCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGAC
GGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCCACCTCCCTCCCGG
ACGGGGCGGCTGGCCGGGCGGGAGCTGACCCCCCCACCTCCCTCCTGGAC
GGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCC
GGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGG
GGCTGACCCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGG
GGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGA
GGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACC
TCCCAGACGGGGCGGCTGGCCA
 G
G
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.1080+3407_1081-263
others(4): Show 
c.1080+3407_1081-2634del
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828316
chr4:1828333 C
C
 A
A
 1 a0001c0002t0016g0009
a0001c0002t0016g0009
 1 HG03139.hp2
HG03139.hp2
 intron_variant MODIFIER c.1081-2650G>T
c.1081-2650G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828333
chr4:1828388 A
A
 C
C
 7 a0001c0001t0001g0024
a0001c0001t0001g0032
a0001c0001t0001g0123
others(4): Show 
a0001c0001t0001g0024
a0001c0001t0001g0032
a0001c0001t0001g0123
a0001c0001t0001g0138
a0001c0001t0002g0132
a0001c0001t0010g0097
a0013c0016t0001g0118
 7 HG02080.hp1
NA18948.hp2
NA18949.hp1
others(4): Show 
HG02080.hp1
NA18948.hp2
NA18949.hp1
NA18975.hp2
NA18995.hp2
NA19009.hp2
NA19057.hp1
 intron_variant MODIFIER c.1081-2705T>G
c.1081-2705T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828388
chr4:1828411 TGGCCGGG
others(210): Show 
TGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAG
GCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACC
CCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGA
CCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCC
TCACTTCCCAGTAGGGGC
 T
T
 7 a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
others(4): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(5): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.1081-2945_1081-272
others(4): Show 
c.1081-2945_1081-2729del
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828411
chr4:1828449 G
G
 A
A
 2 a0001c0001t0001g0153
a0001c0001t0013g0174
a0001c0001t0001g0153
a0001c0001t0013g0174
 2 HG00639.hp2
NA20905.hp1
HG00639.hp2
NA20905.hp1
 intron_variant MODIFIER c.1081-2766C>T
c.1081-2766C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828449
chr4:1828499 GGGGGGCT
others(45): Show 
GGGGGGCTGACCCCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCG
GGC
 G
G
 1 a0001c0001t0001g0067
a0001c0001t0001g0067
 1 HG01069.hp2
HG01069.hp2
 intron_variant MODIFIER c.1081-2868_1081-281
others(56): Show 
c.1081-2868_1081-2817delGCCCGGCCAGCCGCCCCGTCCGGGAG
GGAGGTGGGGGGGGGGGTCAGCCCCC
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828499
chr4:1828508 A
A
 AC
AC
 65 a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0031
others(62): Show 
a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0031
a0001c0001t0001g0034
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0043
a0001c0001t0001g0049
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0085
a0001c0001t0001g0090
a0001c0001t0001g0099
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0137
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0143
a0001c0001t0001g0144
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0177
a0001c0001t0001g0179
a0001c0001t0001g0191
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0087
a0001c0001t0002g0091
a0001c0001t0002g0131
a0001c0001t0002g0151
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0035g0086
a0004c0011t0001g0098
a0010c0012t0001g0042
a0012c0014t0001g0084
a0014c0018t0001g0037
 66 HG00099.hp1
HG00140.hp1
HG00280.hp1
others(63): Show 
HG00099.hp1
HG00140.hp1
HG00280.hp1
HG00280.hp2
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00738.hp1
HG00738.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp2
HG01175.hp1
HG01175.hp2
HG01261.hp1
HG01516.hp2
HG01517.hp2
HG01928.hp1
HG01943.hp1
HG01943.hp2
HG01952.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02015.hp1
HG02015.hp2
HG02055.hp2
HG02080.hp2
HG02135.hp1
HG02135.hp2
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02965.hp1
HG03239.hp2
HG03491.hp2
HG03492.hp1
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04199.hp1
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18952.hp1
NA18952.hp2
NA18983.hp2
NA18995.hp1
NA18998.hp1
NA19009.hp1
NA19068.hp1
NA19079.hp1
NA19079.hp2
NA19091.hp2
NA20129.hp1
NA20905.hp2
 intron_variant MODIFIER c.1081-2826dupG
c.1081-2826dupG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828508
chr4:1828508 A
A
 ACC
ACC
 22 a0001c0001t0001g0005
a0001c0001t0001g0033
a0001c0001t0001g0035
others(19): Show 
a0001c0001t0001g0005
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0040
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0056
a0001c0001t0001g0059
a0001c0001t0001g0068
a0001c0001t0001g0079
a0001c0001t0001g0083
a0001c0001t0001g0089
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0103
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0002g0039
a0001c0001t0002g0066
a0001c0001t0002g0092
a0001c0001t0013g0174
a0001c0001t0029g0133
 23 HG00140.hp2
HG00438.hp1
HG00438.hp2
others(20): Show 
HG00140.hp2
HG00438.hp1
HG00438.hp2
HG00597.hp2
HG00639.hp2
HG01081.hp2
HG01255.hp1
HG01261.hp2
HG01346.hp1
HG01515.hp1
HG01952.hp1
HG02055.hp1
HG03239.hp1
HG03486.hp2
HG03688.hp1
HG03688.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp2
HG06807.hp2
NA19000.hp2
NA19030.hp2
NA19057.hp2
 intron_variant MODIFIER c.1081-2827_1081-282
others(6): Show 
c.1081-2827_1081-2826dupGG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828508
chr4:1828508 AC
AC
 A
A
 14 a0001c0001t0001g0149
a0001c0001t0001g0159
a0001c0001t0002g0132
others(11): Show 
a0001c0001t0001g0149
a0001c0001t0001g0159
a0001c0001t0002g0132
a0001c0001t0011g0167
a0001c0001t0020g0008
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 14 HG01168.hp1
HG01891.hp1
HG02559.hp1
others(11): Show 
HG01168.hp1
HG01891.hp1
HG02559.hp1
HG02723.hp1
HG02818.hp2
HG02886.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp1
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19043.hp2
 intron_variant MODIFIER c.1081-2826delG
c.1081-2826delG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828508
chr4:1828511 C
C
 G
G
 2 a0001c0001t0001g0148
a0011c0015t0001g0146
a0001c0001t0001g0148
a0011c0015t0001g0146
 2 HG02145.hp1
HG02818.hp1
HG02145.hp1
HG02818.hp1
 intron_variant MODIFIER c.1081-2828G>C
c.1081-2828G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828511
chr4:1828512 C
C
 A
A
 9 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
others(6): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1081-2829G>T
c.1081-2829G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828512
chr4:1828551 C
C
 CAGAGGGG
others(200): Show 
CAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCC
CACCTCCCGGACGGGGCAGCTGGCTGGGCGGGGGGCTGACCCCCCAACCT
CCCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGCTCCCCACTTCCCAG
CAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGG
CCGGGCAG
 1 a0001c0001t0002g0151
a0001c0001t0002g0151
 1 NA18906.hp1
NA18906.hp1
 intron_variant MODIFIER c.1081-2869_1081-286
others(211): Show 
c.1081-2869_1081-2868insCTGCCCGGCCAGCCGCCCCGTCCGGG
AGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTGCTGGGAAGTGGGGAGCCC
CTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTTGGGGGGTCAGCCC
CCCGCCCAGCCAGCTGCCCCGTCCGGGAGGTGGGGGGCGCCTCTGCCCGG
CCGCCCCTACTGGGAAGTGAGGAGCCCCTCT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828551
chr4:1828608 T
T
 C
C
 2 a0008c0009t0001g0189
a0008c0009t0001g0190
a0008c0009t0001g0189
a0008c0009t0001g0190
 2 HG02922.hp2
HG03209.hp1
HG02922.hp2
HG03209.hp1
 intron_variant MODIFIER c.1081-2925A>G
c.1081-2925A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828608
chr4:1828751 G
G
 A
A
 1 a0001c0001t0001g0032
a0001c0001t0001g0032
 1 NA19057.hp1
NA19057.hp1
 intron_variant MODIFIER c.1081-3068C>T
c.1081-3068C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828751
chr4:1828755 C
C
 A
A
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.1081-3072G>T
c.1081-3072G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828755
chr4:1828888 G
G
 A
A
 10 a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
others(7): Show 
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0034g0147
a0008c0009t0001g0189
a0008c0009t0001g0190
a0011c0015t0001g0146
 10 HG01255.hp2
HG02145.hp1
HG02145.hp2
others(7): Show 
HG01255.hp2
HG02145.hp1
HG02145.hp2
HG02818.hp1
HG02922.hp2
HG02976.hp1
HG03209.hp1
HG03453.hp2
NA18906.hp1
NA19043.hp2
 intron_variant MODIFIER c.1081-3205C>T
c.1081-3205C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828888
chr4:1828955 ACCTCCCG
others(45): Show 
ACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCCAC
CTC
 A
A
 1 a0001c0001t0001g0148
a0001c0001t0001g0148
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1081-3324_1081-327
others(56): Show 
c.1081-3324_1081-3273delGAGGTGGGGGGGGGTCAGCCCCCCTG
CCCGGCCAGCCGCCCCGTCCGGGAGG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828955
chr4:1828993 A
A
 AC
AC
 21 a0001c0001t0001g0036
a0001c0001t0001g0058
a0001c0001t0001g0080
others(18): Show 
a0001c0001t0001g0036
a0001c0001t0001g0058
a0001c0001t0001g0080
a0001c0001t0001g0083
a0001c0001t0001g0089
a0001c0001t0001g0094
a0001c0001t0001g0117
a0001c0001t0001g0120
a0001c0001t0001g0129
a0001c0001t0002g0039
a0001c0001t0002g0051
a0001c0001t0002g0066
a0001c0001t0002g0087
a0001c0001t0002g0115
a0001c0001t0005g0095
a0001c0001t0007g0136
a0001c0001t0028g0044
a0001c0001t0031g0082
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0018
 21 HG00597.hp1
HG00597.hp2
HG00609.hp1
others(18): Show 
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG01261.hp1
HG01261.hp2
HG01952.hp1
HG01981.hp2
HG02055.hp1
HG02055.hp2
HG02135.hp2
HG02559.hp2
HG02622.hp1
HG02647.hp2
HG03098.hp1
HG03669.hp2
HG03942.hp1
HG04115.hp1
HG04199.hp2
NA18975.hp1
NA18998.hp1
 intron_variant MODIFIER c.1081-3311dupG
c.1081-3311dupG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1828993
chr4:1829038 A
A
 G
G
 17 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
others(14): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0006c0006t0025g0025
a0006c0006t0027g0026
 18 HG01168.hp1
HG02559.hp1
HG02559.hp2
others(15): Show 
HG01168.hp1
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1081-3355T>C
c.1081-3355T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829038
chr4:1829048 C
C
 G
G
 1 a0001c0001t0001g0159
a0001c0001t0001g0159
 1 HG02818.hp2
HG02818.hp2
 intron_variant MODIFIER c.1081-3365G>C
c.1081-3365G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829048
chr4:1829116 G
G
 A
A
 1 a0001c0001t0001g0079
a0001c0001t0001g0079
 1 NA19057.hp2
NA19057.hp2
 intron_variant MODIFIER c.1081-3433C>T
c.1081-3433C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829116
chr4:1829116 G
G
 T
T
 1 a0001c0001t0001g0104
a0001c0001t0001g0104
 1 HG00099.hp1
HG00099.hp1
 intron_variant MODIFIER c.1081-3433C>A
c.1081-3433C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829116
chr4:1829133 ACCTCCCG
others(46): Show 
ACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCCCA
CCTC
 A
A
 5 a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0005g0004
others(2): Show 
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
 6 HG02055.hp2
HG02647.hp2
HG02723.hp2
others(3): Show 
HG02055.hp2
HG02647.hp2
HG02723.hp2
HG02976.hp2
HG03471.hp1
HG06807.hp1
 intron_variant MODIFIER c.1081-3503_1081-345
others(57): Show 
c.1081-3503_1081-3451delGAGGTGGGGGGGGGGTCAGCCCCCCT
GCCCGGCCAGCCGCCCCGTCCGGGAGG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829133
chr4:1829137 C
C
 G
G
 1 a0001c0001t0001g0112
a0001c0001t0001g0112
 1 HG02080.hp2
HG02080.hp2
 intron_variant MODIFIER c.1081-3454G>C
c.1081-3454G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829137
chr4:1829164 GGGGCTGA
others(172): Show 
GGGGCTGACCCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGC
GGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCA
GAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCA
CCTCCCAGACGGGGCGGCTGGCCAGGCGGA
 G
G
 1 a0001c0017t0001g0169
a0001c0017t0001g0169
 1 HG02109.hp1
HG02109.hp1
 intron_variant MODIFIER c.1080+3401_1081-348
others(4): Show 
c.1080+3401_1081-3482del
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829164
chr4:1829171 A
A
 AC
AC
 29 a0001c0001t0001g0038
a0001c0001t0001g0056
a0001c0001t0001g0071
others(26): Show 
a0001c0001t0001g0038
a0001c0001t0001g0056
a0001c0001t0001g0071
a0001c0001t0001g0080
a0001c0001t0001g0083
a0001c0001t0001g0094
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0129
a0001c0001t0001g0148
a0001c0001t0001g0152
a0001c0001t0001g0158
a0001c0001t0001g0173
a0001c0001t0001g0178
a0001c0001t0002g0051
a0001c0001t0002g0066
a0001c0001t0002g0072
a0001c0001t0002g0092
a0001c0001t0002g0132
a0001c0001t0002g0188
a0001c0001t0007g0134
a0001c0001t0007g0136
a0001c0001t0010g0097
a0001c0001t0012g0022
a0001c0001t0014g0064
a0001c0001t0029g0133
a0001c0001t0032g0057
a0009c0010t0001g0111
 29 HG00280.hp2
HG00438.hp2
HG00597.hp1
others(26): Show 
HG00280.hp2
HG00438.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01099.hp1
HG01175.hp2
HG01261.hp1
HG01261.hp2
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02647.hp1
HG03453.hp1
HG03688.hp1
HG04115.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp2
NA18949.hp1
NA18984.hp1
NA18984.hp2
NA19000.hp2
NA19068.hp2
NA19091.hp2
 intron_variant MODIFIER c.1081-3489dupG
c.1081-3489dupG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829171
chr4:1829171 AC
AC
 A
A
 13 a0001c0001t0001g0040
a0001c0001t0002g0039
a0001c0001t0020g0008
others(10): Show 
a0001c0001t0001g0040
a0001c0001t0002g0039
a0001c0001t0020g0008
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
a0011c0015t0001g0146
 13 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(10): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG02818.hp1
HG02886.hp1
HG03579.hp2
HG04115.hp2
HG04199.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1081-3489delG
c.1081-3489delG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829171
chr4:1829174 C
C
 A
A
 1 a0001c0002t0016g0009
a0001c0002t0016g0009
 1 HG03139.hp2
HG03139.hp2
 intron_variant MODIFIER c.1081-3491G>T
c.1081-3491G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829174
chr4:1829174 C
C
 G
G
 1 a0001c0013t0015g0011
a0001c0013t0015g0011
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.1081-3491G>C
c.1081-3491G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829174
chr4:1829181 C
C
 A
A
 2 a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0076
a0001c0001t0001g0077
 2 HG03491.hp2
HG03492.hp1
HG03491.hp2
HG03492.hp1
 intron_variant MODIFIER c.1081-3498G>T
c.1081-3498G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829181
chr4:1829209 C
C
 T
T
 6 a0001c0001t0001g0031
a0001c0001t0001g0073
a0001c0001t0001g0089
others(3): Show 
a0001c0001t0001g0031
a0001c0001t0001g0073
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0103
a0001c0001t0001g0112
 6 HG01346.hp1
HG01928.hp1
HG01943.hp2
others(3): Show 
HG01346.hp1
HG01928.hp1
HG01943.hp2
HG01952.hp1
HG01993.hp1
HG02080.hp2
 intron_variant MODIFIER c.1081-3526G>A
c.1081-3526G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829209
chr4:1829213 C
C
 A
A
 2 a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0087
a0001c0001t0002g0088
 2 HG02647.hp2
HG02976.hp2
HG02647.hp2
HG02976.hp2
 intron_variant MODIFIER c.1081-3530G>T
c.1081-3530G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829213
chr4:1829221 C
C
 G
G
 2 a0001c0001t0001g0040
a0001c0001t0002g0039
a0001c0001t0001g0040
a0001c0001t0002g0039
 2 HG04115.hp2
HG04199.hp2
HG04115.hp2
HG04199.hp2
 intron_variant MODIFIER c.1080+3523G>C
c.1080+3523G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829221
chr4:1829291 C
C
 T
T
 1 a0001c0001t0002g0151
a0001c0001t0002g0151
 1 NA18906.hp1
NA18906.hp1
 intron_variant MODIFIER c.1080+3453G>A
c.1080+3453G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829291
chr4:1829337 A
A
 G
G
 9 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
others(6): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1080+3407T>C
c.1080+3407T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829337
chr4:1829341 G
G
 A
A
 6 a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
others(3): Show 
a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 7 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(4): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03195.hp1
 intron_variant MODIFIER c.1080+3403C>T
c.1080+3403C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829341
chr4:1829389 C
C
 T
T
 1 a0001c0002t0017g0012
a0001c0002t0017g0012
 1 HG02257.hp2
HG02257.hp2
 intron_variant MODIFIER c.1080+3355G>A
c.1080+3355G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829389
chr4:1829526 C
C
 G
G
 1 a0001c0001t0029g0133
a0001c0001t0029g0133
 1 HG00438.hp2
HG00438.hp2
 intron_variant MODIFIER c.1080+3218G>C
c.1080+3218G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829526
chr4:1829828 C
C
 A
A
 2 a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0014g0064
a0001c0001t0014g0065
 2 HG00280.hp2
HG01099.hp2
HG00280.hp2
HG01099.hp2
 intron_variant MODIFIER c.1080+2916G>T
c.1080+2916G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829828
chr4:1829869 G
G
 GAC
GAC
 2 a0001c0001t0001g0192
a0001c0002t0019g0010
a0001c0001t0001g0192
a0001c0002t0019g0010
 2 HG01168.hp2
HG03139.hp1
HG01168.hp2
HG03139.hp1
 intron_variant MODIFIER c.1080+2873_1080+287
others(6): Show 
c.1080+2873_1080+2874dupGT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1829869
chr4:1830266 G
G
 A
A
 1 a0001c0001t0002g0157
a0001c0001t0002g0157
 1 HG02004.hp2
HG02004.hp2
 intron_variant MODIFIER c.1080+2478C>T
c.1080+2478C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1830266
chr4:1830387 G
G
 C
C
 9 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
others(6): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 9 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(6): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.1080+2357C>G
c.1080+2357C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1830387
chr4:1830474 G
G
 A
A
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.1080+2270C>T
c.1080+2270C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1830474
chr4:1830475 C
C
 T
T
 1 a0001c0001t0001g0191
a0001c0001t0001g0191
 1 NA18952.hp2
NA18952.hp2
 intron_variant MODIFIER c.1080+2269G>A
c.1080+2269G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1830475
chr4:1830595 C
C
 G
G
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.1080+2149G>C
c.1080+2149G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1830595
chr4:1830956 T
T
 C
C
 10 a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
others(7): Show 
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0034g0147
a0008c0009t0001g0189
a0008c0009t0001g0190
a0011c0015t0001g0146
 10 HG01255.hp2
HG02145.hp1
HG02145.hp2
others(7): Show 
HG01255.hp2
HG02145.hp1
HG02145.hp2
HG02818.hp1
HG02922.hp2
HG02976.hp1
HG03209.hp1
HG03453.hp2
NA18906.hp1
NA19043.hp2
 intron_variant MODIFIER c.1080+1788A>G
c.1080+1788A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1830956
chr4:1831039 C
C
 T
T
 1 a0001c0002t0017g0012
a0001c0002t0017g0012
 1 HG02257.hp2
HG02257.hp2
 intron_variant MODIFIER c.1080+1705G>A
c.1080+1705G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831039
chr4:1831098 G
G
 A
A
 1 a0001c0001t0001g0149
a0001c0001t0001g0149
 1 NA19043.hp2
NA19043.hp2
 intron_variant MODIFIER c.1080+1646C>T
c.1080+1646C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831098
chr4:1831099 G
G
 A
A
 1 a0001c0001t0001g0149
a0001c0001t0001g0149
 1 NA19043.hp2
NA19043.hp2
 intron_variant MODIFIER c.1080+1645C>T
c.1080+1645C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831099
chr4:1831120 C
C
 G
G
 1 a0001c0001t0001g0140
a0001c0001t0001g0140
 1 HG01106.hp2
HG01106.hp2
 intron_variant MODIFIER c.1080+1624G>C
c.1080+1624G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831120
chr4:1831348 T
T
 C
C
 2 a0001c0001t0001g0001
a0001c0001t0001g0175
a0001c0001t0001g0001
a0001c0001t0001g0175
 4 HG02922.hp1
HG03486.hp1
HG03540.hp1
others(1): Show 
HG02922.hp1
HG03486.hp1
HG03540.hp1
NA20129.hp2
 intron_variant MODIFIER c.1080+1396A>G
c.1080+1396A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831348
chr4:1831683 C
C
 T
T
 7 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(4): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0027g0026
 8 HG01975.hp1
HG02257.hp2
HG03098.hp2
others(5): Show 
HG01975.hp1
HG02257.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA18522.hp2
NA19030.hp1
 intron_variant MODIFIER c.1080+1061G>A
c.1080+1061G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831683
chr4:1831827 A
A
 G
G
 3 a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0020g0008
a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0020g0008
 3 HG01167.hp1
HG02647.hp1
HG02886.hp1
HG01167.hp1
HG02647.hp1
HG02886.hp1
 intron_variant MODIFIER c.1080+917T>C
c.1080+917T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831827
chr4:1831888 C
C
 T
T
 1 a0005c0005t0018g0019
a0005c0005t0018g0019
 1 HG01975.hp1
HG01975.hp1
 intron_variant MODIFIER c.1080+856G>A
c.1080+856G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1831888
chr4:1832066 C
C
 T
T
 1 a0001c0001t0001g0005
a0001c0001t0001g0005
 2 HG00140.hp2
HG01515.hp1
HG00140.hp2
HG01515.hp1
 intron_variant MODIFIER c.1080+678G>A
c.1080+678G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832066
chr4:1832147 CA
CA
 C
C
 6 a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
others(3): Show 
a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 7 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(4): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03195.hp1
 intron_variant MODIFIER c.1080+596delT
c.1080+596delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832147
chr4:1832258 C
C
 T
T
 1 a0001c0001t0002g0091
a0001c0001t0002g0091
 1 HG02698.hp2
HG02698.hp2
 intron_variant MODIFIER c.1080+486G>A
c.1080+486G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832258
chr4:1832322 C
C
 G
G
 1 a0001c0001t0001g0054
a0001c0001t0001g0054
 1 HG02280.hp2
HG02280.hp2
 intron_variant MODIFIER c.1080+422G>C
c.1080+422G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832322
chr4:1832324 G
G
 C
C
 1 a0001c0001t0002g0145
a0001c0001t0002g0145
 1 HG01243.hp2
HG01243.hp2
 intron_variant MODIFIER c.1080+420C>G
c.1080+420C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832324
chr4:1832600 T
T
 C
C
 8 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
others(5): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp2
HG02622.hp1
HG02809.hp2
others(5): Show 
HG02559.hp2
HG02622.hp1
HG02809.hp2
HG03098.hp1
HG03098.hp2
HG03139.hp2
HG03195.hp1
NA19030.hp1
 intron_variant MODIFIER c.1080+144A>G
c.1080+144A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832600
chr4:1832695 C
C
 A
A
 26 a0001c0001t0001g0149
a0001c0001t0008g0002
a0001c0001t0020g0008
others(23): Show 
a0001c0001t0001g0149
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
a0008c0009t0001g0189
a0008c0009t0001g0190
 28 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(25): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG02922.hp2
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
NA19043.hp2
 intron_variant MODIFIER c.1080+49G>T
c.1080+49G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832695
chr4:1832720 G
G
 C
C
 5 a0001c0001t0001g0043
a0001c0001t0001g0067
a0001c0001t0001g0068
others(2): Show 
a0001c0001t0001g0043
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0002g0066
 5 HG01069.hp2
HG01261.hp2
HG03492.hp2
others(2): Show 
HG01069.hp2
HG01261.hp2
HG03492.hp2
HG06807.hp2
NA20129.hp1
 intron_variant MODIFIER c.1080+24C>G
c.1080+24C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 6/13 chr4 1832720
chr4:1832993 C
C
 T
T
 1 a0001c0001t0002g0055
a0001c0001t0002g0055
 1 NA18995.hp1
NA18995.hp1
 intron_variant MODIFIER c.877-46G>A
c.877-46G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1832993
chr4:1833032 T
T
 G
G
 1 a0001c0002t0004g0014
a0001c0002t0004g0014
 1 HG03098.hp2
HG03098.hp2
 intron_variant MODIFIER c.877-85A>C
c.877-85A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833032
chr4:1833073 C
C
 CT
CT
 5 a0001c0002t0017g0012
a0002c0003t0021g0020
a0003c0004t0003g0018
others(2): Show 
a0001c0002t0017g0012
a0002c0003t0021g0020
a0003c0004t0003g0018
a0006c0006t0025g0025
a0006c0006t0027g0026
 5 HG02257.hp2
HG02559.hp1
HG02622.hp1
others(2): Show 
HG02257.hp2
HG02559.hp1
HG02622.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.877-127dupA
c.877-127dupA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833073
chr4:1833131 G
G
 A
A
 2 a0009c0010t0001g0070
a0009c0010t0001g0111
a0009c0010t0001g0070
a0009c0010t0001g0111
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.877-184C>T
c.877-184C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833131
chr4:1833164 T
T
 C
C
 1 a0002c0003t0022g0184
a0002c0003t0022g0184
 1 HG03579.hp2
HG03579.hp2
 intron_variant MODIFIER c.877-217A>G
c.877-217A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833164
chr4:1833165 G
G
 A
A
 1 a0002c0003t0022g0184
a0002c0003t0022g0184
 1 HG03579.hp2
HG03579.hp2
 intron_variant MODIFIER c.877-218C>T
c.877-218C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833165
chr4:1833184 G
G
 C
C
 3 a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 3 HG02559.hp1
NA18522.hp1
NA18522.hp2
HG02559.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.877-237C>G
c.877-237C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833184
chr4:1833188 T
T
 C
C
 4 a0001c0001t0001g0071
a0002c0003t0021g0020
a0006c0006t0025g0025
others(1): Show 
a0001c0001t0001g0071
a0002c0003t0021g0020
a0006c0006t0025g0025
a0006c0006t0027g0026
 4 HG02559.hp1
NA18522.hp1
NA18522.hp2
others(1): Show 
HG02559.hp1
NA18522.hp1
NA18522.hp2
NA18945.hp2
 intron_variant MODIFIER c.877-241A>G
c.877-241A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833188
chr4:1833261 G
G
 A
A
 1 a0001c0017t0001g0169
a0001c0017t0001g0169
 1 HG02109.hp1
HG02109.hp1
 intron_variant MODIFIER c.877-314C>T
c.877-314C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833261
chr4:1833262 A
A
 G
G
 27 a0001c0001t0001g0029
a0001c0001t0002g0087
a0001c0001t0002g0088
others(24): Show 
a0001c0001t0001g0029
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0005g0041
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0006g0154
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 29 HG01168.hp1
HG01891.hp2
HG01975.hp1
others(26): Show 
HG01168.hp1
HG01891.hp2
HG01975.hp1
HG02257.hp2
HG02258.hp1
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02647.hp2
HG02809.hp2
HG02886.hp1
HG02976.hp2
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03471.hp1
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.877-315T>C
c.877-315T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833262
chr4:1833819 A
A
 G
G
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.877-872T>C
c.877-872T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833819
chr4:1833903 C
C
 T
T
 1 a0001c0002t0016g0009
a0001c0002t0016g0009
 1 HG03139.hp2
HG03139.hp2
 intron_variant MODIFIER c.876+942G>A
c.876+942G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833903
chr4:1833924 G
G
 A
A
 3 a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0173
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0173
 3 HG01099.hp1
HG01516.hp1
HG01517.hp2
HG01099.hp1
HG01516.hp1
HG01517.hp2
 intron_variant MODIFIER c.876+921C>T
c.876+921C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833924
chr4:1833932 C
C
 T
T
 1 a0001c0001t0033g0078
a0001c0001t0033g0078
 1 HG03491.hp1
HG03491.hp1
 intron_variant MODIFIER c.876+913G>A
c.876+913G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1833932
chr4:1834000 G
G
 A
A
 6 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(3): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 6 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.876+845C>T
c.876+845C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834000
chr4:1834048 C
C
 T
T
 2 a0006c0006t0025g0025
a0006c0006t0027g0026
a0006c0006t0025g0025
a0006c0006t0027g0026
 2 NA18522.hp1
NA18522.hp2
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.876+797G>A
c.876+797G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834048
chr4:1834072 G
G
 A
A
 1 a0001c0001t0008g0002
a0001c0001t0008g0002
 2 HG02615.hp1
HG02622.hp2
HG02615.hp1
HG02622.hp2
 intron_variant MODIFIER c.876+773C>T
c.876+773C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834072
chr4:1834215 G
G
 A
A
 2 a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0029
a0001c0001t0001g0030
 2 HG02258.hp1
HG03579.hp1
HG02258.hp1
HG03579.hp1
 intron_variant MODIFIER c.876+630C>T
c.876+630C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834215
chr4:1834402 G
G
 A
A
 1 a0001c0001t0002g0072
a0001c0001t0002g0072
 1 NA19068.hp2
NA19068.hp2
 intron_variant MODIFIER c.876+443C>T
c.876+443C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834402
chr4:1834420 C
C
 A
A
 5 a0001c0001t0001g0031
a0001c0001t0001g0073
a0001c0001t0001g0089
others(2): Show 
a0001c0001t0001g0031
a0001c0001t0001g0073
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0112
 5 HG01928.hp1
HG01943.hp2
HG01952.hp1
others(2): Show 
HG01928.hp1
HG01943.hp2
HG01952.hp1
HG01993.hp1
HG02080.hp2
 intron_variant MODIFIER c.876+425G>T
c.876+425G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834420
chr4:1834601 T
T
 A
A
 2 a0001c0001t0001g0046
a0001c0001t0001g0096
a0001c0001t0001g0046
a0001c0001t0001g0096
 2 HG03239.hp1
HG03688.hp2
HG03239.hp1
HG03688.hp2
 intron_variant MODIFIER c.876+244A>T
c.876+244A>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834601
chr4:1834776 C
C
 T
T
 1 a0001c0001t0001g0102
a0001c0001t0001g0102
 1 NA19091.hp1
NA19091.hp1
 intron_variant MODIFIER c.876+69G>A
c.876+69G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 5/13 chr4 1834776
chr4:1835051 C
C
 T
T
 1 a0006c0006t0025g0025
a0006c0006t0025g0025
 1 NA18522.hp1
NA18522.hp1
 intron_variant MODIFIER c.739-69G>A
c.739-69G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835051
chr4:1835100 C
C
 G
G
 1 a0001c0001t0010g0166
a0001c0001t0010g0166
 1 HG02965.hp2
HG02965.hp2
 intron_variant MODIFIER c.739-118G>C
c.739-118G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835100
chr4:1835262 C
C
 G
G
 2 a0005c0005t0004g0003
a0005c0005t0018g0019
a0005c0005t0004g0003
a0005c0005t0018g0019
 3 HG01975.hp1
HG03209.hp2
HG03540.hp2
HG01975.hp1
HG03209.hp2
HG03540.hp2
 intron_variant MODIFIER c.739-280G>C
c.739-280G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835262
chr4:1835309 C
C
 T
T
 1 a0001c0001t0001g0021
a0001c0001t0001g0021
 1 HG03239.hp2
HG03239.hp2
 intron_variant MODIFIER c.739-327G>A
c.739-327G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835309
chr4:1835436 G
G
 A
A
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.739-454C>T
c.739-454C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835436
chr4:1835480 C
C
 CA
CA
 13 a0001c0001t0008g0002
a0001c0002t0004g0013
a0001c0002t0004g0014
others(10): Show 
a0001c0001t0008g0002
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
 15 HG01975.hp1
HG02257.hp2
HG02559.hp2
others(12): Show 
HG01975.hp1
HG02257.hp2
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.739-499dupT
c.739-499dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835480
chr4:1835484 C
C
 A
A
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.739-502G>T
c.739-502G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835484
chr4:1835486 AAAAC
AAAAC
 A
A
 5 a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0176
others(2): Show 
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0034g0147
 5 HG01255.hp2
HG02145.hp2
HG02976.hp1
others(2): Show 
HG01255.hp2
HG02145.hp2
HG02976.hp1
HG03453.hp2
NA18906.hp1
 intron_variant MODIFIER c.739-508_739-505del
others(4): Show 
c.739-508_739-505delGTTT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835486
chr4:1835501 G
G
 C
C
 2 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0004g0013
a0001c0002t0004g0014
 2 HG03098.hp2
NA19030.hp1
HG03098.hp2
NA19030.hp1
 intron_variant MODIFIER c.739-519C>G
c.739-519C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835501
chr4:1835762 T
T
 C
C
 1 a0001c0001t0002g0115
a0001c0001t0002g0115
 1 HG01981.hp2
HG01981.hp2
 intron_variant MODIFIER c.738+667A>G
c.738+667A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835762
chr4:1835978 G
G
 C
C
 3 a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
 3 HG01255.hp2
HG02145.hp2
NA18906.hp1
HG01255.hp2
HG02145.hp2
NA18906.hp1
 intron_variant MODIFIER c.738+451C>G
c.738+451C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835978
chr4:1835995 A
A
 G
G
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.738+434T>C
c.738+434T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1835995
chr4:1836193 G
G
 C
C
 9 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
others(6): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0001c0013t0015g0011
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 10 HG02559.hp1
HG02559.hp2
HG02615.hp1
others(7): Show 
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.738+236C>G
c.738+236C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1836193
chr4:1836212 T
T
 G
G
 1 a0001c0017t0001g0169
a0001c0017t0001g0169
 1 HG02109.hp1
HG02109.hp1
 intron_variant MODIFIER c.738+217A>C
c.738+217A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 4/13 chr4 1836212
chr4:1836582 G
G
 A
A
 6 a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
others(3): Show 
a0001c0001t0008g0002
a0001c0013t0015g0011
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 7 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(4): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG03098.hp1
HG03195.hp1
 intron_variant MODIFIER c.595-10C>T
c.595-10C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1836582
chr4:1836600 G
G
 T
T
 2 a0001c0001t0001g0054
a0001c0001t0001g0122
a0001c0001t0001g0054
a0001c0001t0001g0122
 2 HG02257.hp1
HG02280.hp2
HG02257.hp1
HG02280.hp2
 intron_variant MODIFIER c.595-28C>A
c.595-28C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1836600
chr4:1836843 C
C
 T
T
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.595-271G>A
c.595-271G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1836843
chr4:1836856 G
G
 A
A
 1 a0001c0001t0001g0081
a0001c0001t0001g0081
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.595-284C>T
c.595-284C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1836856
chr4:1837118 T
T
 C
C
 1 a0014c0018t0001g0037
a0014c0018t0001g0037
 1 NA19009.hp1
NA19009.hp1
 intron_variant MODIFIER c.595-546A>G
c.595-546A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837118
chr4:1837151 G
G
 A
A
 1 a0001c0001t0034g0147
a0001c0001t0034g0147
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.595-579C>T
c.595-579C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837151
chr4:1837187 G
G
 T
T
 1 a0001c0002t0019g0010
a0001c0002t0019g0010
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.595-615C>A
c.595-615C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837187
chr4:1837311 G
G
 A
A
 2 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0004g0013
a0001c0002t0004g0014
 2 HG03098.hp2
NA19030.hp1
HG03098.hp2
NA19030.hp1
 intron_variant MODIFIER c.595-739C>T
c.595-739C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837311
chr4:1837353 A
A
 C
C
 1 a0001c0001t0002g0087
a0001c0001t0002g0087
 1 HG02647.hp2
HG02647.hp2
 intron_variant MODIFIER c.595-781T>G
c.595-781T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837353
chr4:1837439 A
A
 T
T
 1 a0001c0001t0008g0002
a0001c0001t0008g0002
 2 HG02615.hp1
HG02622.hp2
HG02615.hp1
HG02622.hp2
 intron_variant MODIFIER c.595-867T>A
c.595-867T>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837439
chr4:1837442 G
G
 A
A
 1 a0004c0011t0001g0098
a0004c0011t0001g0098
 1 HG03710.hp2
HG03710.hp2
 intron_variant MODIFIER c.595-870C>T
c.595-870C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837442
chr4:1837516 A
A
 T
T
 1 a0001c0002t0004g0013
a0001c0002t0004g0013
 1 NA19030.hp1
NA19030.hp1
 intron_variant MODIFIER c.595-944T>A
c.595-944T>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837516
chr4:1837534 T
T
 G
G
 2 a0001c0001t0001g0165
a0001c0001t0001g0168
a0001c0001t0001g0165
a0001c0001t0001g0168
 2 HG02615.hp2
HG03195.hp2
HG02615.hp2
HG03195.hp2
 intron_variant MODIFIER c.595-962A>C
c.595-962A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837534
chr4:1837699 G
G
 GT
GT
 10 a0001c0001t0001g0034
a0001c0001t0001g0122
a0001c0001t0002g0050
others(7): Show 
a0001c0001t0001g0034
a0001c0001t0001g0122
a0001c0001t0002g0050
a0001c0001t0002g0053
a0001c0001t0002g0125
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0157
a0006c0006t0025g0025
a0006c0006t0027g0026
 10 HG02004.hp1
HG02004.hp2
HG02257.hp1
others(7): Show 
HG02004.hp1
HG02004.hp2
HG02257.hp1
HG03942.hp2
HG04199.hp1
NA18522.hp1
NA18522.hp2
NA18949.hp1
NA19063.hp1
NA19063.hp2
 intron_variant MODIFIER c.595-1128dupA
c.595-1128dupA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837699
chr4:1837699 GT
GT
 G
G
 7 a0001c0001t0001g0074
a0001c0001t0001g0079
a0001c0001t0001g0128
others(4): Show 
a0001c0001t0001g0074
a0001c0001t0001g0079
a0001c0001t0001g0128
a0001c0001t0002g0088
a0001c0001t0020g0008
a0001c0017t0001g0169
a0002c0003t0021g0020
 7 HG00558.hp1
HG00558.hp2
HG02109.hp1
others(4): Show 
HG00558.hp1
HG00558.hp2
HG02109.hp1
HG02559.hp1
HG02886.hp1
HG02976.hp2
NA19057.hp2
 intron_variant MODIFIER c.595-1128delA
c.595-1128delA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837699
chr4:1837699 GTT
GTT
 G
G
 6 a0001c0001t0008g0002
a0001c0002t0016g0009
a0003c0004t0003g0015
others(3): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 7 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(4): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.595-1129_595-1128d
others(4): Show 
c.595-1129_595-1128delAA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837699
chr4:1837820 G
G
 A
A
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 HG02015.hp2
HG02015.hp2
 intron_variant MODIFIER c.595-1248C>T
c.595-1248C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837820
chr4:1837991 C
C
 T
T
 2 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0004g0013
a0001c0002t0004g0014
 2 HG03098.hp2
NA19030.hp1
HG03098.hp2
NA19030.hp1
 intron_variant MODIFIER c.595-1419G>A
c.595-1419G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1837991
chr4:1838164 A
A
 C
C
 8 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(5): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 8 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(5): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.595-1592T>G
c.595-1592T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838164
chr4:1838345 G
G
 A
A
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.595-1773C>T
c.595-1773C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838345
chr4:1838346 C
C
 T
T
 1 a0001c0001t0001g0177
a0001c0001t0001g0177
 1 HG02698.hp1
HG02698.hp1
 intron_variant MODIFIER c.595-1774G>A
c.595-1774G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838346
chr4:1838413 A
A
 G
G
 8 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
others(5): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 9 HG02559.hp1
HG02559.hp2
HG02615.hp1
others(6): Show 
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.595-1841T>C
c.595-1841T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838413
chr4:1838420 G
G
 C
C
 2 a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0076
a0001c0001t0001g0077
 2 HG03491.hp2
HG03492.hp1
HG03491.hp2
HG03492.hp1
 intron_variant MODIFIER c.595-1848C>G
c.595-1848C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838420
chr4:1838500 G
G
 A
A
 1 a0001c0001t0033g0078
a0001c0001t0033g0078
 1 HG03491.hp1
HG03491.hp1
 intron_variant MODIFIER c.595-1928C>T
c.595-1928C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838500
chr4:1838569 C
C
 T
T
 8 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
others(5): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 9 HG02559.hp1
HG02559.hp2
HG02615.hp1
others(6): Show 
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.595-1997G>A
c.595-1997G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838569
chr4:1838664 C
C
 T
T
 2 a0001c0001t0001g0079
a0001c0001t0001g0094
a0001c0001t0001g0079
a0001c0001t0001g0094
 2 HG00597.hp2
NA19057.hp2
HG00597.hp2
NA19057.hp2
 intron_variant MODIFIER c.595-2092G>A
c.595-2092G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1838664
chr4:1839059 T
T
 C
C
 1 a0001c0001t0001g0113
a0001c0001t0001g0113
 1 NA18983.hp2
NA18983.hp2
 intron_variant MODIFIER c.594+2288A>G
c.594+2288A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839059
chr4:1839116 A
A
 G
G
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.594+2231T>C
c.594+2231T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839116
chr4:1839330 C
C
 T
T
 1 a0001c0001t0001g0142
a0001c0001t0001g0142
 1 HG02109.hp2
HG02109.hp2
 intron_variant MODIFIER c.594+2017G>A
c.594+2017G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839330
chr4:1839406 A
A
 C
C
 2 a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0030g0052
a0001c0001t0031g0082
 2 HG03834.hp2
HG03942.hp1
HG03834.hp2
HG03942.hp1
 intron_variant MODIFIER c.594+1941T>G
c.594+1941T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839406
chr4:1839495 A
A
 G
G
 4 a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
others(1): Show 
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0002g0051
 4 HG00099.hp2
HG00738.hp1
HG01261.hp1
others(1): Show 
HG00099.hp2
HG00738.hp1
HG01261.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.594+1852T>C
c.594+1852T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839495
chr4:1839603 T
T
 C
C
 6 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(3): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 6 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.594+1744A>G
c.594+1744A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839603
chr4:1839906 G
G
 C
C
 11 a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
others(8): Show 
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 12 HG01255.hp2
HG02145.hp2
HG02559.hp1
others(9): Show 
HG01255.hp2
HG02145.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
NA18906.hp1
 intron_variant MODIFIER c.594+1441C>G
c.594+1441C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839906
chr4:1839936 T
T
 C
C
 1 a0010c0012t0001g0042
a0010c0012t0001g0042
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.594+1411A>G
c.594+1411A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1839936
chr4:1840443 A
A
 G
G
 1 a0001c0001t0001g0153
a0001c0001t0001g0153
 1 NA20905.hp1
NA20905.hp1
 intron_variant MODIFIER c.594+904T>C
c.594+904T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840443
chr4:1840515 A
A
 C
C
 1 a0001c0001t0001g0192
a0001c0001t0001g0192
 1 HG01168.hp2
HG01168.hp2
 intron_variant MODIFIER c.594+832T>G
c.594+832T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840515
chr4:1840592 C
C
 T
T
 3 a0001c0001t0001g0143
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0001t0001g0143
a0001c0002t0004g0013
a0001c0002t0004g0014
 3 HG01175.hp1
HG03098.hp2
NA19030.hp1
HG01175.hp1
HG03098.hp2
NA19030.hp1
 intron_variant MODIFIER c.594+755G>A
c.594+755G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840592
chr4:1840593 G
G
 A
A
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.594+754C>T
c.594+754C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840593
chr4:1840611 C
C
 T
T
 3 a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0188
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0188
 3 NA18983.hp1
NA18984.hp1
NA19063.hp1
NA18983.hp1
NA18984.hp1
NA19063.hp1
 intron_variant MODIFIER c.594+736G>A
c.594+736G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840611
chr4:1840616 C
C
 T
T
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.594+731G>A
c.594+731G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840616
chr4:1840638 A
A
 AGCCT
AGCCT
 2 a0001c0001t0002g0050
a0001c0001t0002g0157
a0001c0001t0002g0050
a0001c0001t0002g0157
 2 HG02004.hp1
HG02004.hp2
HG02004.hp1
HG02004.hp2
 intron_variant MODIFIER c.594+705_594+708dup
others(4): Show 
c.594+705_594+708dupAGGC
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840638
chr4:1840684 C
C
 T
T
 6 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(3): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 6 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.594+663G>A
c.594+663G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840684
chr4:1840709 T
T
 TA
TA
 6 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0019g0010
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0019g0010
a0001c0013t0015g0011
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02809.hp2
HG03098.hp2
others(4): Show 
HG01975.hp1
HG02809.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.594+637dupT
c.594+637dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840709
chr4:1840812 C
C
 T
T
 2 a0001c0002t0019g0010
a0001c0013t0015g0011
a0001c0002t0019g0010
a0001c0013t0015g0011
 2 HG02809.hp2
HG03139.hp1
HG02809.hp2
HG03139.hp1
 intron_variant MODIFIER c.594+535G>A
c.594+535G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840812
chr4:1840913 T
T
 G
G
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.594+434A>C
c.594+434A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1840913
chr4:1841110 G
G
 A
A
 8 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(5): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 8 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(5): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.594+237C>T
c.594+237C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1841110
chr4:1841148 G
G
 C
C
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.594+199C>G
c.594+199C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1841148
chr4:1841274 A
A
 G
G
 1 a0001c0001t0002g0131
a0001c0001t0002g0131
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.594+73T>C
c.594+73T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1841274
chr4:1841280 G
G
 A
A
 1 a0001c0001t0001g0114
a0001c0001t0001g0114
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.594+67C>T
c.594+67C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1841280
chr4:1841334 A
A
 G
G
 10 a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
others(7): Show 
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0008g0002
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 11 HG01255.hp2
HG02145.hp2
HG02559.hp1
others(8): Show 
HG01255.hp2
HG02145.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
NA18906.hp1
 intron_variant MODIFIER c.594+13T>C
c.594+13T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 3/13 chr4 1841334
chr4:1842039 G
G
 A
A
 2 a0001c0001t0001g0079
a0001c0001t0001g0094
a0001c0001t0001g0079
a0001c0001t0001g0094
 2 HG00597.hp2
NA19057.hp2
HG00597.hp2
NA19057.hp2
 intron_variant MODIFIER c.144-242C>T
c.144-242C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1842039
chr4:1842258 A
A
 C
C
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.144-461T>G
c.144-461T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1842258
chr4:1842443 C
C
 G
G
 1 a0001c0001t0002g0131
a0001c0001t0002g0131
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.144-646G>C
c.144-646G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1842443
chr4:1842725 G
G
 A
A
 2 a0001c0001t0001g0085
a0001c0001t0035g0086
a0001c0001t0001g0085
a0001c0001t0035g0086
 2 NA19079.hp1
NA19079.hp2
NA19079.hp1
NA19079.hp2
 intron_variant MODIFIER c.144-928C>T
c.144-928C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1842725
chr4:1842961 C
C
 G
G
 5 a0001c0001t0008g0002
a0003c0004t0003g0015
a0003c0004t0003g0016
others(2): Show 
a0001c0001t0008g0002
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 6 HG02559.hp2
HG02615.hp1
HG02622.hp1
others(3): Show 
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG03098.hp1
HG03195.hp1
 intron_variant MODIFIER c.144-1164G>C
c.144-1164G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1842961
chr4:1843097 G
G
 A
A
 1 a0002c0003t0026g0186
a0002c0003t0026g0186
 1 HG02723.hp1
HG02723.hp1
 intron_variant MODIFIER c.144-1300C>T
c.144-1300C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843097
chr4:1843104 G
G
 A
A
 5 a0001c0001t0001g0080
a0001c0001t0001g0119
a0001c0001t0001g0172
others(2): Show 
a0001c0001t0001g0080
a0001c0001t0001g0119
a0001c0001t0001g0172
a0001c0001t0002g0115
a0001c0001t0028g0044
 5 HG00609.hp1
HG01952.hp2
HG01981.hp2
others(2): Show 
HG00609.hp1
HG01952.hp2
HG01981.hp2
HG02135.hp1
NA18975.hp1
 intron_variant MODIFIER c.144-1307C>T
c.144-1307C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843104
chr4:1843159 TA
TA
 T
T
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.144-1363delT
c.144-1363delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843159
chr4:1843240 G
G
 A
A
 1 a0001c0001t0001g0116
a0001c0001t0001g0116
 1 NA19091.hp2
NA19091.hp2
 intron_variant MODIFIER c.144-1443C>T
c.144-1443C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843240
chr4:1843293 C
C
 T
T
 5 a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0005g0004
others(2): Show 
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
 6 HG02055.hp2
HG02647.hp2
HG02723.hp2
others(3): Show 
HG02055.hp2
HG02647.hp2
HG02723.hp2
HG02976.hp2
HG03471.hp1
HG06807.hp1
 intron_variant MODIFIER c.144-1496G>A
c.144-1496G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843293
chr4:1843433 G
G
 A
A
 1 a0001c0001t0002g0188
a0001c0001t0002g0188
 1 NA18984.hp1
NA18984.hp1
 intron_variant MODIFIER c.144-1636C>T
c.144-1636C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843433
chr4:1843473 G
G
 T
T
 7 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(4): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0005c0005t0004g0003
a0005c0005t0018g0019
 8 HG01975.hp1
HG02257.hp2
HG02809.hp2
others(5): Show 
HG01975.hp1
HG02257.hp2
HG02809.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.144-1676C>A
c.144-1676C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843473
chr4:1843474 C
C
 T
T
 7 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(4): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0005c0005t0004g0003
a0005c0005t0018g0019
 8 HG01975.hp1
HG02257.hp2
HG02809.hp2
others(5): Show 
HG01975.hp1
HG02257.hp2
HG02809.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.144-1677G>A
c.144-1677G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843474
chr4:1843529 A
A
 G
G
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.144-1732T>C
c.144-1732T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843529
chr4:1843886 A
A
 G
G
 1 a0001c0002t0017g0012
a0001c0002t0017g0012
 1 HG02257.hp2
HG02257.hp2
 intron_variant MODIFIER c.144-2089T>C
c.144-2089T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843886
chr4:1843914 T
T
 C
C
 1 a0001c0001t0001g0081
a0001c0001t0001g0081
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.144-2117A>G
c.144-2117A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1843914
chr4:1844078 G
G
 A
A
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.144-2281C>T
c.144-2281C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844078
chr4:1844098 C
C
 G
G
 1 a0001c0001t0013g0182
a0001c0001t0013g0182
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.144-2301G>C
c.144-2301G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844098
chr4:1844153 C
C
 G
G
 1 a0001c0001t0010g0097
a0001c0001t0010g0097
 1 NA18948.hp2
NA18948.hp2
 intron_variant MODIFIER c.144-2356G>C
c.144-2356G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844153
chr4:1844172 G
G
 C
C
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.144-2375C>G
c.144-2375C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844172
chr4:1844296 A
A
 C
C
 3 a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0173
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0173
 3 HG01099.hp1
HG01516.hp1
HG01517.hp2
HG01099.hp1
HG01516.hp1
HG01517.hp2
 intron_variant MODIFIER c.144-2499T>G
c.144-2499T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844296
chr4:1844484 A
A
 C
C
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.144-2687T>G
c.144-2687T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844484
chr4:1844656 G
G
 A
A
 2 a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0120
a0001c0001t0001g0121
 2 HG02055.hp1
NA19030.hp2
HG02055.hp1
NA19030.hp2
 intron_variant MODIFIER c.144-2859C>T
c.144-2859C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844656
chr4:1844745 T
T
 TA
TA
 6 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(3): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 6 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.144-2949dupT
c.144-2949dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844745
chr4:1844856 T
T
 G
G
 1 a0001c0017t0001g0169
a0001c0017t0001g0169
 1 HG02109.hp1
HG02109.hp1
 intron_variant MODIFIER c.144-3059A>C
c.144-3059A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844856
chr4:1844886 G
G
 GA
GA
 31 a0001c0001t0001g0034
a0001c0001t0001g0038
a0001c0001t0001g0083
others(28): Show 
a0001c0001t0001g0034
a0001c0001t0001g0038
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0094
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0129
a0001c0001t0001g0141
a0001c0001t0001g0143
a0001c0001t0001g0168
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0002g0039
a0001c0001t0002g0092
a0001c0001t0002g0124
a0001c0001t0002g0132
a0001c0001t0002g0145
a0001c0001t0005g0095
a0001c0001t0010g0166
a0001c0001t0011g0167
a0001c0001t0028g0044
a0001c0001t0031g0082
a0001c0001t0035g0086
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 31 HG00597.hp1
HG00597.hp2
HG01175.hp1
others(28): Show 
HG00597.hp1
HG00597.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp2
HG01517.hp2
HG01891.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01981.hp1
HG02055.hp1
HG02055.hp2
HG02135.hp1
HG02135.hp2
HG02615.hp2
HG02965.hp1
HG02965.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04199.hp2
HG04204.hp2
NA18949.hp1
NA18975.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19079.hp1
NA19079.hp2
 intron_variant MODIFIER c.144-3090dupT
c.144-3090dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844886
chr4:1844886 GA
GA
 G
G
 17 a0001c0001t0001g0049
a0001c0001t0001g0176
a0001c0001t0002g0151
others(14): Show 
a0001c0001t0001g0049
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0001t0034g0147
a0001c0002t0004g0014
a0001c0002t0016g0009
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0006c0006t0025g0025
a0006c0006t0027g0026
 18 HG01168.hp1
HG01255.hp2
HG01516.hp2
others(15): Show 
HG01168.hp1
HG01255.hp2
HG01516.hp2
HG02559.hp2
HG02615.hp1
HG02622.hp2
HG02723.hp1
HG02886.hp1
HG02976.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp2
HG03195.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18906.hp1
NA18998.hp2
 intron_variant MODIFIER c.144-3090delT
c.144-3090delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844886
chr4:1844886 GAA
GAA
 G
G
 6 a0001c0002t0004g0013
a0001c0002t0017g0012
a0001c0002t0019g0010
others(3): Show 
a0001c0002t0004g0013
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0005c0005t0004g0003
a0005c0005t0018g0019
 7 HG01975.hp1
HG02257.hp2
HG02809.hp2
others(4): Show 
HG01975.hp1
HG02257.hp2
HG02809.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.144-3091_144-3090d
others(4): Show 
c.144-3091_144-3090delTT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844886
chr4:1844976 G
G
 A
A
 2 a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0012g0022
a0001c0001t0012g0023
 2 HG01167.hp1
HG02647.hp1
HG01167.hp1
HG02647.hp1
 intron_variant MODIFIER c.144-3179C>T
c.144-3179C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1844976
chr4:1845122 G
G
 A
A
 1 a0001c0002t0017g0012
a0001c0002t0017g0012
 1 HG02257.hp2
HG02257.hp2
 intron_variant MODIFIER c.144-3325C>T
c.144-3325C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1845122
chr4:1845184 T
T
 C
C
 2 a0001c0001t0001g0040
a0001c0001t0002g0039
a0001c0001t0001g0040
a0001c0001t0002g0039
 2 HG04115.hp2
HG04199.hp2
HG04115.hp2
HG04199.hp2
 intron_variant MODIFIER c.144-3387A>G
c.144-3387A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1845184
chr4:1845526 A
A
 G
G
 2 a0001c0001t0020g0008
a0001c0013t0015g0011
a0001c0001t0020g0008
a0001c0013t0015g0011
 2 HG02809.hp2
HG02886.hp1
HG02809.hp2
HG02886.hp1
 intron_variant MODIFIER c.143+3623T>C
c.143+3623T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1845526
chr4:1845532 CTTTTTTC
others(4): Show 
CTTTTTTCTTTT
 C
C
 1 a0001c0017t0001g0169
a0001c0017t0001g0169
 1 HG02109.hp1
HG02109.hp1
 intron_variant MODIFIER c.143+3606_143+3616d
others(13): Show 
c.143+3606_143+3616delAAAAGAAAAAA
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1845532
chr4:1845671 C
C
 A
A
 1 a0011c0015t0001g0146
a0011c0015t0001g0146
 1 HG02818.hp1
HG02818.hp1
 intron_variant MODIFIER c.143+3478G>T
c.143+3478G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1845671
chr4:1845959 G
G
 A
A
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.143+3190C>T
c.143+3190C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1845959
chr4:1846002 C
C
 T
T
 2 a0007c0008t0001g0047
a0007c0008t0002g0048
a0007c0008t0001g0047
a0007c0008t0002g0048
 2 HG01515.hp2
HG01517.hp1
HG01515.hp2
HG01517.hp1
 intron_variant MODIFIER c.143+3147G>A
c.143+3147G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846002
chr4:1846019 A
A
 G
G
 2 a0001c0001t0001g0034
a0001c0001t0001g0130
a0001c0001t0001g0034
a0001c0001t0001g0130
 2 HG03710.hp1
HG03942.hp2
HG03710.hp1
HG03942.hp2
 intron_variant MODIFIER c.143+3130T>C
c.143+3130T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846019
chr4:1846032 T
T
 G
G
 2 a0008c0009t0001g0189
a0008c0009t0001g0190
a0008c0009t0001g0189
a0008c0009t0001g0190
 2 HG02922.hp2
HG03209.hp1
HG02922.hp2
HG03209.hp1
 intron_variant MODIFIER c.143+3117A>C
c.143+3117A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846032
chr4:1846078 A
A
 C
C
 1 a0001c0001t0001g0123
a0001c0001t0001g0123
 1 NA18995.hp2
NA18995.hp2
 intron_variant MODIFIER c.143+3071T>G
c.143+3071T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846078
chr4:1846185 G
G
 A
A
 3 a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0002g0180
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0002g0180
 3 HG01071.hp2
HG01346.hp2
HG01993.hp2
HG01071.hp2
HG01346.hp2
HG01993.hp2
 intron_variant MODIFIER c.143+2964C>T
c.143+2964C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846185
chr4:1846280 G
G
 C
C
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.143+2869C>G
c.143+2869C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846280
chr4:1846361 G
G
 A
A
 2 a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0087
a0001c0001t0002g0088
 2 HG02647.hp2
HG02976.hp2
HG02647.hp2
HG02976.hp2
 intron_variant MODIFIER c.143+2788C>T
c.143+2788C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846361
chr4:1846498 C
C
 T
T
 1 a0001c0001t0008g0002
a0001c0001t0008g0002
 2 HG02615.hp1
HG02622.hp2
HG02615.hp1
HG02622.hp2
 intron_variant MODIFIER c.143+2651G>A
c.143+2651G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846498
chr4:1846508 T
T
 G
G
 187 a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
others(184): Show 
a0001c0001t0001g0001
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0021
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0049
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0141
a0001c0001t0001g0142
a0001c0001t0001g0143
a0001c0001t0001g0144
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0153
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0164
a0001c0001t0001g0165
a0001c0001t0001g0168
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0002g0039
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0053
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0066
a0001c0001t0002g0072
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0124
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0145
a0001c0001t0002g0151
a0001c0001t0002g0157
a0001c0001t0002g0160
a0001c0001t0002g0180
a0001c0001t0002g0188
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0008g0002
a0001c0001t0010g0097
a0001c0001t0010g0166
a0001c0001t0011g0163
a0001c0001t0011g0167
a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0013g0174
a0001c0001t0013g0182
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0020g0008
a0001c0001t0028g0044
a0001c0001t0029g0133
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0032g0057
a0001c0001t0033g0078
a0001c0001t0034g0147
a0001c0001t0035g0086
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0001c0017t0001g0169
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0004c0007t0001g0007
a0004c0011t0001g0098
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
a0007c0008t0001g0047
a0007c0008t0002g0048
a0008c0009t0001g0189
a0008c0009t0001g0190
a0009c0010t0001g0070
a0009c0010t0001g0111
a0010c0012t0001g0042
a0011c0015t0001g0146
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 195 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(192): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00639.hp2
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp1
HG01168.hp2
HG01175.hp1
HG01175.hp2
HG01243.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01515.hp1
HG01515.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp1
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02004.hp2
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02615.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA19000.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20905.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.143+2641A>C
c.143+2641A>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846508
chr4:1846981 T
T
 A
A
 15 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(12): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
 17 HG01975.hp1
HG02257.hp2
HG02559.hp1
others(14): Show 
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.143+2168A>T
c.143+2168A>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1846981
chr4:1847060 G
G
 A
A
 7 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(4): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0005c0005t0004g0003
a0005c0005t0018g0019
 8 HG01975.hp1
HG02257.hp2
HG02809.hp2
others(5): Show 
HG01975.hp1
HG02257.hp2
HG02809.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.143+2089C>T
c.143+2089C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847060
chr4:1847063 GCTCA
GCTCA
 G
G
 8 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
others(5): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 9 HG02559.hp1
HG02559.hp2
HG02615.hp1
others(6): Show 
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.143+2082_143+2085d
others(6): Show 
c.143+2082_143+2085delTGAG
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847063
chr4:1847217 T
T
 C
C
 2 a0001c0002t0019g0010
a0001c0013t0015g0011
a0001c0002t0019g0010
a0001c0013t0015g0011
 2 HG02809.hp2
HG03139.hp1
HG02809.hp2
HG03139.hp1
 intron_variant MODIFIER c.143+1932A>G
c.143+1932A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847217
chr4:1847322 T
T
 C
C
 2 a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0089
a0001c0001t0001g0090
 2 HG01943.hp2
HG01952.hp1
HG01943.hp2
HG01952.hp1
 intron_variant MODIFIER c.143+1827A>G
c.143+1827A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847322
chr4:1847383 T
T
 C
C
 1 a0001c0001t0002g0091
a0001c0001t0002g0091
 1 HG02698.hp2
HG02698.hp2
 intron_variant MODIFIER c.143+1766A>G
c.143+1766A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847383
chr4:1847540 C
C
 G
G
 3 a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0096
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0096
 3 HG01255.hp1
HG03239.hp1
HG03688.hp2
HG01255.hp1
HG03239.hp1
HG03688.hp2
 intron_variant MODIFIER c.143+1609G>C
c.143+1609G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847540
chr4:1847824 C
C
 CA
CA
 8 a0001c0001t0001g0024
a0001c0001t0001g0034
a0001c0001t0002g0092
others(5): Show 
a0001c0001t0001g0024
a0001c0001t0001g0034
a0001c0001t0002g0092
a0001c0001t0002g0132
a0001c0001t0002g0180
a0001c0001t0002g0188
a0001c0002t0004g0014
a0002c0003t0009g0185
 8 HG01168.hp1
HG01346.hp2
HG03098.hp2
others(5): Show 
HG01168.hp1
HG01346.hp2
HG03098.hp2
HG03942.hp2
NA18949.hp1
NA18975.hp2
NA18984.hp1
NA19000.hp2
 intron_variant MODIFIER c.143+1324dupT
c.143+1324dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847824
chr4:1847824 CA
CA
 C
C
 5 a0001c0001t0001g0043
a0001c0001t0028g0044
a0001c0002t0017g0012
others(2): Show 
a0001c0001t0001g0043
a0001c0001t0028g0044
a0001c0002t0017g0012
a0001c0002t0019g0010
a0010c0012t0001g0042
 5 HG00280.hp1
HG02257.hp2
HG03139.hp1
others(2): Show 
HG00280.hp1
HG02257.hp2
HG03139.hp1
NA18975.hp1
NA20129.hp1
 intron_variant MODIFIER c.143+1324delT
c.143+1324delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1847824
chr4:1848009 T
T
 A
A
 4 a0001c0001t0001g0040
a0001c0001t0001g0170
a0001c0001t0001g0171
others(1): Show 
a0001c0001t0001g0040
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0173
 4 HG01099.hp1
HG01516.hp1
HG01517.hp2
others(1): Show 
HG01099.hp1
HG01516.hp1
HG01517.hp2
HG04115.hp2
 intron_variant MODIFIER c.143+1140A>T
c.143+1140A>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848009
chr4:1848274 C
C
 T
T
 3 a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
 4 HG02055.hp2
HG02723.hp2
HG03471.hp1
others(1): Show 
HG02055.hp2
HG02723.hp2
HG03471.hp1
HG06807.hp1
 intron_variant MODIFIER c.143+875G>A
c.143+875G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848274
chr4:1848286 T
T
 C
C
 2 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0004g0013
a0001c0002t0004g0014
 2 HG03098.hp2
NA19030.hp1
HG03098.hp2
NA19030.hp1
 intron_variant MODIFIER c.143+863A>G
c.143+863A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848286
chr4:1848365 G
G
 A
A
 3 a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0002g0180
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0002g0180
 3 HG01071.hp2
HG01346.hp2
HG01993.hp2
HG01071.hp2
HG01346.hp2
HG01993.hp2
 intron_variant MODIFIER c.143+784C>T
c.143+784C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848365
chr4:1848405 G
G
 A
A
 1 a0001c0001t0001g0175
a0001c0001t0001g0175
 1 NA20129.hp2
NA20129.hp2
 intron_variant MODIFIER c.143+744C>T
c.143+744C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848405
chr4:1848499 T
T
 C
C
 1 a0001c0002t0017g0012
a0001c0002t0017g0012
 1 HG02257.hp2
HG02257.hp2
 intron_variant MODIFIER c.143+650A>G
c.143+650A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848499
chr4:1848547 C
C
 CA
CA
 11 a0001c0001t0001g0024
a0001c0001t0001g0038
a0001c0001t0001g0040
others(8): Show 
a0001c0001t0001g0024
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0122
a0001c0001t0001g0183
a0001c0001t0002g0039
a0001c0001t0002g0132
a0001c0002t0004g0014
a0008c0009t0001g0190
 11 HG00597.hp2
HG01175.hp2
HG01243.hp1
others(8): Show 
HG00597.hp2
HG01175.hp2
HG01243.hp1
HG02257.hp1
HG02717.hp2
HG02922.hp2
HG03098.hp2
HG04115.hp2
HG04199.hp2
NA18949.hp1
NA18975.hp2
 intron_variant MODIFIER c.143+601dupT
c.143+601dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848547
chr4:1848648 G
G
 A
A
 8 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(5): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 8 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(5): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.143+501C>T
c.143+501C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848648
chr4:1848715 C
C
 CA
CA
 57 a0001c0001t0001g0001
a0001c0001t0001g0032
a0001c0001t0001g0034
others(54): Show 
a0001c0001t0001g0001
a0001c0001t0001g0032
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0130
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0131
a0001c0001t0002g0151
a0001c0001t0002g0180
a0001c0001t0005g0095
a0001c0001t0007g0136
a0001c0001t0010g0097
a0001c0001t0034g0147
a0001c0002t0019g0010
a0002c0003t0009g0027
a0002c0003t0022g0184
a0002c0003t0026g0186
a0004c0007t0001g0007
a0004c0011t0001g0098
a0006c0006t0025g0025
a0006c0006t0027g0026
a0008c0009t0001g0189
a0008c0009t0001g0190
a0009c0010t0001g0111
a0013c0016t0001g0118
a0014c0018t0001g0037
 60 HG00099.hp1
HG00099.hp2
HG00438.hp1
others(57): Show 
HG00099.hp1
HG00099.hp2
HG00438.hp1
HG00609.hp2
HG00738.hp1
HG00738.hp2
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01167.hp2
HG01255.hp2
HG01346.hp1
HG01346.hp2
HG01928.hp2
HG01943.hp1
HG01952.hp2
HG01975.hp2
HG01981.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02257.hp1
HG02723.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03139.hp1
HG03209.hp1
HG03453.hp2
HG03486.hp1
HG03540.hp1
HG03579.hp2
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03942.hp2
HG04199.hp1
HG04204.hp1
NA18522.hp1
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18906.hp1
NA18948.hp2
NA18949.hp2
NA18983.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19043.hp2
NA19057.hp1
NA19091.hp1
NA19091.hp2
NA20129.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.143+433dupT
c.143+433dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848715
chr4:1848715 C
C
 CAA
CAA
 6 a0001c0001t0001g0123
a0001c0001t0001g0152
a0001c0001t0002g0124
others(3): Show 
a0001c0001t0001g0123
a0001c0001t0001g0152
a0001c0001t0002g0124
a0001c0001t0002g0132
a0002c0003t0023g0187
a0002c0003t0024g0028
 6 HG01981.hp1
HG02145.hp2
NA18949.hp1
others(3): Show 
HG01981.hp1
HG02145.hp2
NA18949.hp1
NA18995.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.143+432_143+433dup
others(2): Show 
c.143+432_143+433dupTT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848715
chr4:1848730 A
A
 G
G
 1 a0001c0013t0015g0011
a0001c0013t0015g0011
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.143+419T>C
c.143+419T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848730
chr4:1848731 A
A
 G
G
 1 a0001c0002t0017g0012
a0001c0002t0017g0012
 1 HG02257.hp2
HG02257.hp2
 intron_variant MODIFIER c.143+418T>C
c.143+418T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848731
chr4:1848751 C
C
 T
T
 8 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
others(5): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 9 HG02559.hp1
HG02559.hp2
HG02615.hp1
others(6): Show 
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.143+398G>A
c.143+398G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 2/13 chr4 1848751
chr4:1849227 G
G
 GA
GA
 4 a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
others(1): Show 
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 4 HG02559.hp2
HG02622.hp1
HG03098.hp1
others(1): Show 
HG02559.hp2
HG02622.hp1
HG03098.hp1
HG03195.hp1
 intron_variant MODIFIER c.83-19dupT
c.83-19dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849227
chr4:1849335 G
G
 A
A
 4 a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0188
others(1): Show 
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0188
a0001c0001t0013g0174
 4 HG00639.hp2
NA18983.hp1
NA18984.hp1
others(1): Show 
HG00639.hp2
NA18983.hp1
NA18984.hp1
NA19063.hp1
 intron_variant MODIFIER c.83-126C>T
c.83-126C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849335
chr4:1849367 T
T
 C
C
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.83-158A>G
c.83-158A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849367
chr4:1849430 A
A
 G
G
 3 a0001c0001t0001g0141
a0001c0001t0001g0143
a0001c0001t0001g0153
a0001c0001t0001g0141
a0001c0001t0001g0143
a0001c0001t0001g0153
 3 HG01175.hp1
HG04204.hp2
NA20905.hp1
HG01175.hp1
HG04204.hp2
NA20905.hp1
 intron_variant MODIFIER c.83-221T>C
c.83-221T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849430
chr4:1849496 G
G
 A
A
 3 a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
 3 HG00558.hp1
HG00597.hp1
NA18612.hp1
HG00558.hp1
HG00597.hp1
NA18612.hp1
 intron_variant MODIFIER c.83-287C>T
c.83-287C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849496
chr4:1849557 C
C
 G
G
 1 a0001c0001t0001g0038
a0001c0001t0001g0038
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.83-348G>C
c.83-348G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849557
chr4:1849562 T
T
 C
C
 8 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
others(5): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 9 HG02559.hp1
HG02559.hp2
HG02615.hp1
others(6): Show 
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02886.hp1
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.83-353A>G
c.83-353A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849562
chr4:1849676 C
C
 T
T
 7 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(4): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0005c0005t0004g0003
a0005c0005t0018g0019
 8 HG01975.hp1
HG02257.hp2
HG02809.hp2
others(5): Show 
HG01975.hp1
HG02257.hp2
HG02809.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.83-467G>A
c.83-467G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849676
chr4:1849710 T
T
 A
A
 1 a0001c0002t0019g0010
a0001c0002t0019g0010
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.83-501A>T
c.83-501A>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849710
chr4:1849712 A
A
 C
C
 1 a0001c0002t0019g0010
a0001c0002t0019g0010
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.83-503T>G
c.83-503T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849712
chr4:1849744 C
C
 T
T
 8 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(5): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 8 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(5): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.83-535G>A
c.83-535G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849744
chr4:1849827 C
C
 T
T
 1 a0003c0004t0003g0016
a0003c0004t0003g0016
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.83-618G>A
c.83-618G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849827
chr4:1849865 T
T
 C
C
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.83-656A>G
c.83-656A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849865
chr4:1849877 C
C
 T
T
 3 a0001c0001t0001g0142
a0001c0001t0001g0144
a0001c0001t0002g0145
a0001c0001t0001g0142
a0001c0001t0001g0144
a0001c0001t0002g0145
 3 HG01243.hp2
HG02109.hp2
HG03669.hp1
HG01243.hp2
HG02109.hp2
HG03669.hp1
 intron_variant MODIFIER c.83-668G>A
c.83-668G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849877
chr4:1849882 C
C
 T
T
 3 a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0002g0039
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0002g0039
 3 HG01175.hp2
HG04115.hp2
HG04199.hp2
HG01175.hp2
HG04115.hp2
HG04199.hp2
 intron_variant MODIFIER c.83-673G>A
c.83-673G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849882
chr4:1849943 G
G
 C
C
 3 a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
 3 HG01255.hp2
HG02145.hp2
NA18906.hp1
HG01255.hp2
HG02145.hp2
NA18906.hp1
 intron_variant MODIFIER c.83-734C>G
c.83-734C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1849943
chr4:1850035 A
A
 T
T
 23 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(20): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 25 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(22): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02723.hp1
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.83-826T>A
c.83-826T>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850035
chr4:1850135 C
C
 T
T
 1 a0002c0003t0021g0020
a0002c0003t0021g0020
 1 HG02559.hp1
HG02559.hp1
 intron_variant MODIFIER c.83-926G>A
c.83-926G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850135
chr4:1850144 A
A
 G
G
 1 a0001c0002t0019g0010
a0001c0002t0019g0010
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.83-935T>C
c.83-935T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850144
chr4:1850225 G
G
 T
T
 10 a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
others(7): Show 
a0001c0001t0001g0148
a0001c0001t0001g0149
a0001c0001t0001g0150
a0001c0001t0001g0152
a0001c0001t0001g0176
a0001c0001t0002g0151
a0001c0001t0034g0147
a0008c0009t0001g0189
a0008c0009t0001g0190
a0011c0015t0001g0146
 10 HG01255.hp2
HG02145.hp1
HG02145.hp2
others(7): Show 
HG01255.hp2
HG02145.hp1
HG02145.hp2
HG02818.hp1
HG02922.hp2
HG02976.hp1
HG03209.hp1
HG03453.hp2
NA18906.hp1
NA19043.hp2
 intron_variant MODIFIER c.83-1016C>A
c.83-1016C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850225
chr4:1850296 A
A
 C
C
 1 a0014c0018t0001g0037
a0014c0018t0001g0037
 1 NA19009.hp1
NA19009.hp1
 intron_variant MODIFIER c.83-1087T>G
c.83-1087T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850296
chr4:1850642 C
C
 CA
CA
 3 a0001c0002t0016g0009
a0001c0002t0017g0012
a0002c0003t0021g0020
a0001c0002t0016g0009
a0001c0002t0017g0012
a0002c0003t0021g0020
 3 HG02257.hp2
HG02559.hp1
HG03139.hp2
HG02257.hp2
HG02559.hp1
HG03139.hp2
 intron_variant MODIFIER c.83-1434dupT
c.83-1434dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850642
chr4:1850642 C
C
 CAA
CAA
 7 a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
others(4): Show 
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 7 HG02559.hp2
HG02622.hp1
HG02886.hp1
others(4): Show 
HG02559.hp2
HG02622.hp1
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03195.hp1
NA19030.hp1
 intron_variant MODIFIER c.83-1434_83-1433ins
others(2): Show 
c.83-1434_83-1433insTT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850642
chr4:1850644 G
G
 A
A
 15 a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
others(12): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0016g0009
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0005c0005t0004g0003
a0005c0005t0018g0019
 17 HG01975.hp1
HG02257.hp2
HG02559.hp1
others(14): Show 
HG01975.hp1
HG02257.hp2
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02809.hp2
HG02886.hp1
HG03098.hp1
HG03098.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03540.hp2
NA19030.hp1
 intron_variant MODIFIER c.83-1435C>T
c.83-1435C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850644
chr4:1850644 GA
GA
 G
G
 6 a0001c0001t0001g0036
a0002c0003t0009g0027
a0002c0003t0009g0185
others(3): Show 
a0001c0001t0001g0036
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
 6 HG01168.hp1
HG02723.hp1
HG03669.hp2
others(3): Show 
HG01168.hp1
HG02723.hp1
HG03669.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.83-1436delT
c.83-1436delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850644
chr4:1850645 A
A
 G
G
 3 a0001c0001t0001g0142
a0001c0001t0001g0144
a0001c0001t0002g0145
a0001c0001t0001g0142
a0001c0001t0001g0144
a0001c0001t0002g0145
 3 HG01243.hp2
HG02109.hp2
HG03669.hp1
HG01243.hp2
HG02109.hp2
HG03669.hp1
 intron_variant MODIFIER c.83-1436T>C
c.83-1436T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850645
chr4:1850718 A
A
 T
T
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG00438.hp1
HG00438.hp1
 intron_variant MODIFIER c.83-1509T>A
c.83-1509T>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850718
chr4:1850807 T
T
 TA
TA
 2 a0001c0001t0001g0001
a0001c0001t0001g0175
a0001c0001t0001g0001
a0001c0001t0001g0175
 4 HG02922.hp1
HG03486.hp1
HG03540.hp1
others(1): Show 
HG02922.hp1
HG03486.hp1
HG03540.hp1
NA20129.hp2
 intron_variant MODIFIER c.83-1599dupT
c.83-1599dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850807
chr4:1850925 C
C
 T
T
 2 a0001c0001t0001g0034
a0001c0001t0001g0130
a0001c0001t0001g0034
a0001c0001t0001g0130
 2 HG03710.hp1
HG03942.hp2
HG03710.hp1
HG03942.hp2
 intron_variant MODIFIER c.83-1716G>A
c.83-1716G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850925
chr4:1850937 C
C
 CA
CA
 13 a0001c0001t0001g0130
a0001c0001t0002g0131
a0001c0001t0002g0132
others(10): Show 
a0001c0001t0001g0130
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0002t0016g0009
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0021g0020
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0008c0009t0001g0189
a0008c0009t0001g0190
 13 HG01168.hp1
HG02559.hp1
HG02723.hp1
others(10): Show 
HG01168.hp1
HG02559.hp1
HG02723.hp1
HG02922.hp2
HG03139.hp2
HG03209.hp1
HG03579.hp2
HG03710.hp1
HG04199.hp1
NA18949.hp1
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.83-1729dupT
c.83-1729dupT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850937
chr4:1850937 C
C
 CAA
CAA
 7 a0001c0001t0008g0002
a0001c0001t0020g0008
a0003c0004t0003g0016
others(4): Show 
a0001c0001t0008g0002
a0001c0001t0020g0008
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
a0006c0006t0025g0025
a0006c0006t0027g0026
 8 HG02615.hp1
HG02622.hp1
HG02622.hp2
others(5): Show 
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02886.hp1
HG03098.hp1
HG03195.hp1
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.83-1730_83-1729dup
others(2): Show 
c.83-1730_83-1729dupTT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1850937
chr4:1851340 G
G
 C
C
 4 a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
others(1): Show 
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0029g0133
 4 HG00438.hp2
HG00609.hp2
NA18945.hp1
others(1): Show 
HG00438.hp2
HG00609.hp2
NA18945.hp1
NA19068.hp1
 intron_variant MODIFIER c.83-2131C>G
c.83-2131C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1851340
chr4:1851624 C
C
 G
G
 7 a0001c0001t0008g0002
a0001c0002t0016g0009
a0002c0003t0021g0020
others(4): Show 
a0001c0001t0008g0002
a0001c0002t0016g0009
a0002c0003t0021g0020
a0003c0004t0003g0015
a0003c0004t0003g0016
a0003c0004t0003g0017
a0003c0004t0003g0018
 8 HG02559.hp1
HG02559.hp2
HG02615.hp1
others(5): Show 
HG02559.hp1
HG02559.hp2
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG03098.hp1
HG03139.hp2
HG03195.hp1
 intron_variant MODIFIER c.83-2415G>C
c.83-2415G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1851624
chr4:1851740 C
C
 T
T
 2 a0006c0006t0025g0025
a0006c0006t0027g0026
a0006c0006t0025g0025
a0006c0006t0027g0026
 2 NA18522.hp1
NA18522.hp2
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.83-2531G>A
c.83-2531G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1851740
chr4:1851789 C
C
 T
T
 2 a0006c0006t0025g0025
a0006c0006t0027g0026
a0006c0006t0025g0025
a0006c0006t0027g0026
 2 NA18522.hp1
NA18522.hp2
NA18522.hp1
NA18522.hp2
 intron_variant MODIFIER c.83-2580G>A
c.83-2580G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1851789
chr4:1851853 C
C
 A
A
 1 a0001c0001t0001g0176
a0001c0001t0001g0176
 1 HG01255.hp2
HG01255.hp2
 intron_variant MODIFIER c.83-2644G>T
c.83-2644G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1851853
chr4:1851960 G
G
 A
A
 1 a0001c0001t0001g0137
a0001c0001t0001g0137
 1 NA20905.hp2
NA20905.hp2
 intron_variant MODIFIER c.83-2751C>T
c.83-2751C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1851960
chr4:1852146 C
C
 T
T
 1 a0001c0001t0001g0143
a0001c0001t0001g0143
 1 HG01175.hp1
HG01175.hp1
 intron_variant MODIFIER c.83-2937G>A
c.83-2937G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1852146
chr4:1852374 T
T
 C
C
 1 a0001c0001t0001g0138
a0001c0001t0001g0138
 1 HG02080.hp1
HG02080.hp1
 intron_variant MODIFIER c.83-3165A>G
c.83-3165A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1852374
chr4:1852390 C
C
 T
T
 1 a0001c0001t0001g0033
a0001c0001t0001g0033
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.83-3181G>A
c.83-3181G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1852390
chr4:1852461 T
T
 C
C
 15 a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
others(12): Show 
a0001c0002t0004g0013
a0001c0002t0004g0014
a0001c0002t0017g0012
a0001c0002t0019g0010
a0001c0013t0015g0011
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0005c0005t0004g0003
a0005c0005t0018g0019
a0006c0006t0025g0025
a0006c0006t0027g0026
 16 HG01168.hp1
HG01975.hp1
HG02257.hp2
others(13): Show 
HG01168.hp1
HG01975.hp1
HG02257.hp2
HG02723.hp1
HG02809.hp2
HG03098.hp2
HG03139.hp1
HG03209.hp2
HG03540.hp2
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
NA19030.hp1
 intron_variant MODIFIER c.83-3252A>G
c.83-3252A>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1852461
chr4:1852599 A
A
 T
T
 1 a0001c0001t0001g0142
a0001c0001t0001g0142
 1 HG02109.hp2
HG02109.hp2
 intron_variant MODIFIER c.82+3270T>A
c.82+3270T>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1852599
chr4:1852724 A
A
 G
G
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.82+3145T>C
c.82+3145T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1852724
chr4:1852909 C
C
 G
G
 1 a0001c0001t0001g0032
a0001c0001t0001g0032
 1 NA19057.hp1
NA19057.hp1
 intron_variant MODIFIER c.82+2960G>C
c.82+2960G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1852909
chr4:1853050 G
G
 A
A
 5 a0001c0001t0001g0021
a0001c0001t0001g0177
a0001c0001t0001g0178
others(2): Show 
a0001c0001t0001g0021
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0002g0180
 5 HG01071.hp2
HG01346.hp2
HG01993.hp2
others(2): Show 
HG01071.hp2
HG01346.hp2
HG01993.hp2
HG02698.hp1
HG03239.hp2
 intron_variant MODIFIER c.82+2819C>T
c.82+2819C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853050
chr4:1853122 G
G
 A
A
 1 a0001c0001t0001g0139
a0001c0001t0001g0139
 1 HG01943.hp1
HG01943.hp1
 intron_variant MODIFIER c.82+2747C>T
c.82+2747C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853122
chr4:1853391 A
A
 G
G
 1 a0001c0001t0001g0141
a0001c0001t0001g0141
 1 HG04204.hp2
HG04204.hp2
 intron_variant MODIFIER c.82+2478T>C
c.82+2478T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853391
chr4:1853396 A
A
 C
C
 1 a0001c0001t0008g0002
a0001c0001t0008g0002
 2 HG02615.hp1
HG02622.hp2
HG02615.hp1
HG02622.hp2
 intron_variant MODIFIER c.82+2473T>G
c.82+2473T>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853396
chr4:1853576 G
G
 A
A
 3 a0001c0001t0001g0183
a0001c0001t0002g0181
a0001c0001t0013g0182
a0001c0001t0001g0183
a0001c0001t0002g0181
a0001c0001t0013g0182
 3 HG01243.hp1
HG02717.hp1
HG02809.hp1
HG01243.hp1
HG02717.hp1
HG02809.hp1
 intron_variant MODIFIER c.82+2293C>T
c.82+2293C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853576
chr4:1853747 C
C
 G
G
 1 a0001c0001t0001g0031
a0001c0001t0001g0031
 1 HG01928.hp1
HG01928.hp1
 intron_variant MODIFIER c.82+2122G>C
c.82+2122G>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853747
chr4:1853761 C
C
 T
T
 1 a0002c0003t0022g0184
a0002c0003t0022g0184
 1 HG03579.hp2
HG03579.hp2
 intron_variant MODIFIER c.82+2108G>A
c.82+2108G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853761
chr4:1853799 G
G
 A
A
 8 a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
others(5): Show 
a0002c0003t0009g0027
a0002c0003t0009g0185
a0002c0003t0022g0184
a0002c0003t0023g0187
a0002c0003t0024g0028
a0002c0003t0026g0186
a0006c0006t0025g0025
a0006c0006t0027g0026
 8 HG01168.hp1
HG02723.hp1
HG03579.hp2
others(5): Show 
HG01168.hp1
HG02723.hp1
HG03579.hp2
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18998.hp2
NA19000.hp1
 intron_variant MODIFIER c.82+2070C>T
c.82+2070C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1853799
chr4:1854059 C
C
 T
T
 2 a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0029
a0001c0001t0001g0030
 2 HG02258.hp1
HG03579.hp1
HG02258.hp1
HG03579.hp1
 intron_variant MODIFIER c.82+1810G>A
c.82+1810G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854059
chr4:1854261 C
C
 A
A
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.82+1608G>T
c.82+1608G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854261
chr4:1854340 C
C
 A
A
 1 a0001c0001t0001g0140
a0001c0001t0001g0140
 1 HG01106.hp2
HG01106.hp2
 intron_variant MODIFIER c.82+1529G>T
c.82+1529G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854340
chr4:1854466 C
C
 T
T
 121 a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0024
others(118): Show 
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0024
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0032
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0038
a0001c0001t0001g0040
a0001c0001t0001g0043
a0001c0001t0001g0045
a0001c0001t0001g0046
a0001c0001t0001g0049
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0060
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0079
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0083
a0001c0001t0001g0085
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0099
a0001c0001t0001g0100
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0001g0106
a0001c0001t0001g0107
a0001c0001t0001g0108
a0001c0001t0001g0110
a0001c0001t0001g0112
a0001c0001t0001g0113
a0001c0001t0001g0114
a0001c0001t0001g0116
a0001c0001t0001g0117
a0001c0001t0001g0119
a0001c0001t0001g0120
a0001c0001t0001g0121
a0001c0001t0001g0122
a0001c0001t0001g0123
a0001c0001t0001g0127
a0001c0001t0001g0128
a0001c0001t0001g0129
a0001c0001t0001g0130
a0001c0001t0001g0137
a0001c0001t0001g0138
a0001c0001t0001g0139
a0001c0001t0001g0140
a0001c0001t0001g0191
a0001c0001t0002g0039
a0001c0001t0002g0050
a0001c0001t0002g0051
a0001c0001t0002g0053
a0001c0001t0002g0055
a0001c0001t0002g0063
a0001c0001t0002g0066
a0001c0001t0002g0072
a0001c0001t0002g0087
a0001c0001t0002g0088
a0001c0001t0002g0091
a0001c0001t0002g0092
a0001c0001t0002g0109
a0001c0001t0002g0115
a0001c0001t0002g0124
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0131
a0001c0001t0002g0132
a0001c0001t0002g0188
a0001c0001t0005g0004
a0001c0001t0005g0041
a0001c0001t0005g0095
a0001c0001t0007g0134
a0001c0001t0007g0135
a0001c0001t0007g0136
a0001c0001t0010g0097
a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0014g0064
a0001c0001t0014g0065
a0001c0001t0028g0044
a0001c0001t0029g0133
a0001c0001t0030g0052
a0001c0001t0031g0082
a0001c0001t0032g0057
a0001c0001t0033g0078
a0001c0001t0035g0086
a0004c0007t0001g0007
a0004c0011t0001g0098
a0007c0008t0001g0047
a0007c0008t0002g0048
a0009c0010t0001g0070
a0009c0010t0001g0111
a0010c0012t0001g0042
a0012c0014t0001g0084
a0013c0016t0001g0118
a0014c0018t0001g0037
 125 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(122): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00639.hp1
HG00738.hp1
HG00738.hp2
HG01069.hp1
HG01069.hp2
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01167.hp1
HG01167.hp2
HG01175.hp2
HG01255.hp1
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01515.hp1
HG01515.hp2
HG01516.hp2
HG01517.hp1
HG01928.hp1
HG01928.hp2
HG01943.hp1
HG01943.hp2
HG01952.hp1
HG01975.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG02004.hp1
HG02015.hp1
HG02015.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02135.hp1
HG02135.hp2
HG02257.hp1
HG02258.hp1
HG02280.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp2
HG02717.hp2
HG02723.hp2
HG02965.hp1
HG02976.hp2
HG03239.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03579.hp1
HG03669.hp2
HG03688.hp1
HG03688.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG06807.hp1
HG06807.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18949.hp1
NA18952.hp1
NA18952.hp2
NA18975.hp1
NA18975.hp2
NA18983.hp1
NA18983.hp2
NA18984.hp1
NA18984.hp2
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA19000.hp2
NA19009.hp1
NA19009.hp2
NA19030.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19068.hp1
NA19068.hp2
NA19079.hp1
NA19079.hp2
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20905.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.82+1403G>A
c.82+1403G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854466
chr4:1854479 CA
CA
 C
C
 6 a0001c0001t0001g0024
a0002c0003t0009g0027
a0002c0003t0021g0020
others(3): Show 
a0001c0001t0001g0024
a0002c0003t0009g0027
a0002c0003t0021g0020
a0002c0003t0024g0028
a0006c0006t0025g0025
a0006c0006t0027g0026
 6 HG02559.hp1
NA18522.hp1
NA18522.hp2
others(3): Show 
HG02559.hp1
NA18522.hp1
NA18522.hp2
NA18949.hp2
NA18975.hp2
NA19000.hp1
 intron_variant MODIFIER c.82+1389delT
c.82+1389delT
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854479
chr4:1854490 A
A
 G
G
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.82+1379T>C
c.82+1379T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854490
chr4:1854519 C
C
 A
A
 1 a0001c0001t0002g0188
a0001c0001t0002g0188
 1 NA18984.hp1
NA18984.hp1
 intron_variant MODIFIER c.82+1350G>T
c.82+1350G>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854519
chr4:1854592 G
G
 A
A
 2 a0008c0009t0001g0189
a0008c0009t0001g0190
a0008c0009t0001g0189
a0008c0009t0001g0190
 2 HG02922.hp2
HG03209.hp1
HG02922.hp2
HG03209.hp1
 intron_variant MODIFIER c.82+1277C>T
c.82+1277C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854592
chr4:1854654 G
G
 C
C
 1 a0001c0001t0001g0191
a0001c0001t0001g0191
 1 NA18952.hp2
NA18952.hp2
 intron_variant MODIFIER c.82+1215C>G
c.82+1215C>G
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1854654
chr4:1855054 G
G
 A
A
 1 a0001c0001t0001g0192
a0001c0001t0001g0192
 1 HG01168.hp2
HG01168.hp2
 intron_variant MODIFIER c.82+815C>T
c.82+815C>T
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1855054
chr4:1855432 A
A
 G
G
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.82+437T>C
c.82+437T>C
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1855432
chr4:1855456 C
C
 T
T
 2 a0001c0001t0012g0022
a0001c0001t0012g0023
a0001c0001t0012g0022
a0001c0001t0012g0023
 2 HG01167.hp1
HG02647.hp1
HG01167.hp1
HG02647.hp1
 intron_variant MODIFIER c.82+413G>A
c.82+413G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1855456
chr4:1855603 G
G
 T
T
 1 a0001c0001t0001g0021
a0001c0001t0001g0021
 1 HG03239.hp2
HG03239.hp2
 intron_variant MODIFIER c.82+266C>A
c.82+266C>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1855603
chr4:1855709 C
C
 T
T
 1 a0001c0001t0020g0008
a0001c0001t0020g0008
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.82+160G>A
c.82+160G>A
LETM1 ENSG00000168924.15 transcript ENST00000302787.3 protein_coding 1/13 chr4 1855709

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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