Joint Open Genome and Omics Platform (JoGo)

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geneid	122394733
ensemblid	ENSG00000269226.8
hgncid	55173
symbol	TMSB15C
name	thymosin beta 15C
refseq_nuc	NM_001395930.1
refseq_prot	NP_001382859.1
ensembl_nuc	ENST00000598087.4
ensembl_prot	ENSP00000472749.1
mane_status	MANE Select
chr	chrX
start	104072887
end	104076236
strand	-
ver	v1.2
region	chrX:104072887-104076236
region5000	chrX:104067887-104081236
regionname0	TMSB15C_chrX_104072887_104076236
regionname5000	TMSB15C_chrX_104067887_104081236

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	45	94	19	16	45	4	10	32	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	138	94	19	16	45	4	10	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	515	89	19	16	42	2	10	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
t0002	0/0	514	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
t0003	0/0	516	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
t0004	0/0	515	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
t0005	0/0	512	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
t0006	0/0	515	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	33	7	6	15	0	5	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0002	0/0	32	5	5	15	2	5	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0003	0/0	5	0	1	4	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0004	0/0	5	0	1	4	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0005	0/0	2	1	1	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0006	0/0	2	2	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0007	0/0	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0008	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0009	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0010	0/0	1	0	1	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0011	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0012	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0013	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0014	0/0	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0015	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0016	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0017	0/0	1	0	1	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0018	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0019	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0020	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
g0021	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	138	94	19	16	45	4	10	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	652	89	19	16	42	2	10	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
a0001c0001t0002	0/0	651	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
a0001c0001t0003	0/0	653	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
a0001c0001t0004	0/0	652	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
a0001c0001t0005	0/0	649	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236
a0001c0001t0006	0/0	652	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	copy fasta	chrX	104067887	104081236

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	33	7	6	15	0	5	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0002	0/0	32	5	5	15	2	5	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0003	0/0	5	0	1	4	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0004	0/0	5	0	1	4	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0005	0/0	2	1	1	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0006	0/0	2	2	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0009	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0010	0/0	1	0	1	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0011	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0012	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0013	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0015	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0016	0/0	1	1	0	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0017	0/0	1	0	1	0	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0018	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0001g0019	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0002g0007	0/0	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0003g0008	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0004g0014	0/0	1	0	0	0	1	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0005g0020	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
a0001c0001t0006g0021	0/0	1	0	0	1	0	0	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp2	a0001	c0001	t0004	g0014	EUR	GBR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00423	hp1	a0001	c0001	t0001	g0002	EAS	CHS	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00423	hp2	a0001	c0001	t0001	g0019	EAS	CHS	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00544	hp1	a0001	c0001	t0001	g0002	EAS	CHS	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00609	hp1	a0001	c0001	t0001	g0002	EAS	CHS	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00621	hp1	a0001	c0001	t0001	g0003	EAS	CHS	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00733	hp2	a0001	c0001	t0001	g0002	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG00738	hp2	a0001	c0001	t0001	g0002	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01069	hp1	a0001	c0001	t0001	g0002	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01109	hp2	a0001	c0001	t0001	g0005	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01175	hp1	a0001	c0001	t0001	g0010	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01175	hp2	a0001	c0001	t0001	g0017	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01192	hp1	a0001	c0001	t0001	g0003	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01261	hp1	a0001	c0001	t0001	g0002	AMR	CLM	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01433	hp2	a0001	c0001	t0001	g0002	AMR	CLM	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01515	hp1	a0001	c0001	t0002	g0007	EUR	IBS	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01884	hp1	a0001	c0001	t0001	g0002	AFR	ACB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01891	hp1	a0001	c0001	t0001	g0013	AFR	ACB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01891	hp2	a0001	c0001	t0001	g0002	AFR	ACB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02071	hp1	a0001	c0001	t0001	g0002	EAS	KHV	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02074	hp1	a0001	c0001	t0001	g0002	EAS	KHV	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02083	hp1	a0001	c0001	t0001	g0004	EAS	KHV	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02132	hp1	a0001	c0001	t0001	g0003	EAS	KHV	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02135	hp1	a0001	c0001	t0001	g0002	EAS	KHV	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02258	hp1	a0001	c0001	t0001	g0002	AFR	ACB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02630	hp1	a0001	c0001	t0001	g0006	AFR	GWD	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02735	hp1	a0001	c0001	t0001	g0002	SAS	PJL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03130	hp1	a0001	c0001	t0001	g0012	AFR	ESN	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03209	hp1	a0001	c0001	t0001	g0002	AFR	MSL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03492	hp1	a0001	c0001	t0001	g0002	SAS	PJL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03704	hp1	a0001	c0001	t0001	g0002	SAS	PJL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03704	hp2	a0001	c0001	t0001	g0002	SAS	PJL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18940	hp1	a0001	c0001	t0005	g0020	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18941	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18941	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18943	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18953	hp1	a0001	c0001	t0006	g0021	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18962	hp1	a0001	c0001	t0001	g0015	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18969	hp2	a0001	c0001	t0001	g0004	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18970	hp1	a0001	c0001	t0001	g0003	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18971	hp1	a0001	c0001	t0001	g0003	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18986	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18988	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18990	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18995	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19004	hp1	a0001	c0001	t0003	g0008	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19043	hp2	a0001	c0001	t0001	g0016	AFR	LWK	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19055	hp1	a0001	c0001	t0001	g0018	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19064	hp2	a0001	c0001	t0001	g0004	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19070	hp2	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19074	hp1	a0001	c0001	t0001	g0009	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19079	hp1	a0001	c0001	t0001	g0002	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA19089	hp1	a0001	c0001	t0001	g0004	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA20752	hp1	a0001	c0001	t0001	g0002	EUR	TSI	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01123	hp1	a0001	c0001	t0001	g0004	AMR	CLM	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG06807	hp1	a0001	c0001	t0001	g0006	AFR	USA	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
HG06807	hp2	a0001	c0001	t0001	g0011	AFR	USA	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA20300	hp1	a0001	c0001	t0001	g0005	AFR	USA	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	TMSB15C_chrX_104067887_104081236	TMSB15C	chrX	104067887	104081236

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:104073000	TA TA	T T	1	a0001c0001t0005 a0001c0001t0005	1	NA18940.hp1 NA18940.hp1	3_prime_UTR_variant	MODIFIER	c.286delT c.286delT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	3/3	286	chrX	104073000
chrX:104073051	TC TC	T T	1	a0001c0001t0005 a0001c0001t0005	1	NA18940.hp1 NA18940.hp1	3_prime_UTR_variant	MODIFIER	c.235delG c.235delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	3/3	235	chrX	104073051
chrX:104073098	C C	A A	1	a0001c0001t0004 a0001c0001t0004	1	HG00140.hp2 HG00140.hp2	3_prime_UTR_variant	MODIFIER	c.189G>T c.189G>T	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	3/3	189	chrX	104073098
chrX:104073156	AG AG	A A	1	a0001c0001t0005 a0001c0001t0005	1	NA18940.hp1 NA18940.hp1	3_prime_UTR_variant	MODIFIER	c.130delC c.130delC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	3/3	130	chrX	104073156
chrX:104076173	C C	CG CG	1	a0001c0001t0003 a0001c0001t0003	1	NA19004.hp1 NA19004.hp1	5_prime_UTR_variant	MODIFIER	c.-52dupC c.-52dupC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/3	1834	chrX	104076173
chrX:104076212	T T	C C	1	a0001c0001t0006 a0001c0001t0006	1	NA18953.hp1 NA18953.hp1	5_prime_UTR_variant	MODIFIER	c.-90A>G c.-90A>G	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/3	1872	chrX	104076212
chrX:104076213	TC TC	T T	1	a0001c0001t0002 a0001c0001t0002	1	HG01515.hp1 HG01515.hp1	5_prime_UTR_variant	MODIFIER	c.-92delG c.-92delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/3	1874	chrX	104076213

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:104073391	G G	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.101-67C>T c.101-67C>T	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073391
chrX:104073392	A A	G G	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.101-68T>C c.101-68T>C	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073392
chrX:104073518	AT AT	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.101-195delA c.101-195delA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073518
chrX:104073546	GT GT	G G	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.101-223delA c.101-223delA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073546
chrX:104073666	T T	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.101-342A>T c.101-342A>T	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073666
chrX:104073766	AG AG	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.101-443delC c.101-443delC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073766
chrX:104073861	C C	CA CA	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.100+379dupT c.100+379dupT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073861
chrX:104073881	G G	GC GC	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.100+359_100+360ins others(1): Show c.100+359_100+360insG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073881
chrX:104073889	AG AG	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.100+351delC c.100+351delC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073889
chrX:104073958	TA TA	T T	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.100+282delT c.100+282delT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104073958
chrX:104074085	GA GA	G G	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.100+155delT c.100+155delT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	2/2	chrX	104074085
chrX:104074360	GA GA	G G	1	a0001c0001t0001g0015 a0001c0001t0001g0015	1	NA18962.hp1 NA18962.hp1	splice_region_variant&intron_variant	LOW	c.-17-4delT c.-17-4delT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074360
chrX:104074365	G G	GA GA	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-9dupT c.-17-9dupT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074365
chrX:104074379	C C	CT CT	1	a0001c0001t0001g0013 a0001c0001t0001g0013	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.-17-23dupA c.-17-23dupA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074379
chrX:104074379	CT CT	C C	1	a0001c0001t0001g0015 a0001c0001t0001g0015	1	NA18962.hp1 NA18962.hp1	intron_variant	MODIFIER	c.-17-23delA c.-17-23delA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074379
chrX:104074432	A A	G G	10	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0010 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0003g0008 a0001c0001t0004g0014 a0001c0001t0005g0020 a0001c0001t0006g0021	43	HG00140.hp2 HG00544.hp2 HG00733.hp1 others(40): Show HG00140.hp2 HG00544.hp2 HG00733.hp1 HG01099.hp1 HG01123.hp2 HG01175.hp1 HG01243.hp1 HG01258.hp2 HG01884.hp2 HG01891.hp1 HG01943.hp2 HG02040.hp1 HG02486.hp2 HG02572.hp1 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG03017.hp2 HG03471.hp1 HG03486.hp2 HG03834.hp2 HG04228.hp1 HG06807.hp1 NA18612.hp1 NA18940.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18960.hp2 NA18962.hp1 NA18969.hp1 NA18982.hp1 NA19004.hp1 NA19006.hp1 NA19007.hp1 NA19012.hp2 NA19043.hp2 NA19064.hp1 NA19066.hp1 NA19074.hp2 NA19088.hp1 NA20300.hp2 NA20905.hp2	intron_variant	MODIFIER	c.-17-75T>C c.-17-75T>C	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074432
chrX:104074449	A A	AC AC	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-17-93dupG c.-17-93dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074449
chrX:104074535	AT AT	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-179delA c.-17-179delA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074535
chrX:104074559	G G	GT GT	1	a0001c0001t0001g0011 a0001c0001t0001g0011	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.-17-203_-17-202ins others(1): Show c.-17-203_-17-202insA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074559
chrX:104074603	CA CA	C C	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-247delT c.-17-247delT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074603
chrX:104074618	C C	T T	1	a0001c0001t0001g0005 a0001c0001t0001g0005	2	HG01109.hp2 NA20300.hp1 HG01109.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-17-261G>A c.-17-261G>A	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074618
chrX:104074626	TC TC	T T	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-270delG c.-17-270delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074626
chrX:104074671	G G	GA GA	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-17-315dupT c.-17-315dupT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074671
chrX:104074733	CA CA	C C	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-377delT c.-17-377delT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074733
chrX:104074817	AT AT	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-461delA c.-17-461delA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104074817
chrX:104075112	TG TG	T T	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-756delC c.-17-756delC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075112
chrX:104075238	GT GT	G G	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-17-882delA c.-17-882delA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075238
chrX:104075250	T T	C C	1	a0001c0001t0001g0006 a0001c0001t0001g0006	2	HG02630.hp1 HG06807.hp1 HG02630.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-18+890A>G c.-18+890A>G	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075250
chrX:104075257	A A	AG AG	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+882dupC c.-18+882dupC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075257
chrX:104075279	A A	AC AC	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+860dupG c.-18+860dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075279
chrX:104075296	A A	G G	2	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0011 a0001c0001t0001g0012	2	HG03130.hp1 HG06807.hp2 HG03130.hp1 HG06807.hp2	intron_variant	MODIFIER	c.-18+844T>C c.-18+844T>C	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075296
chrX:104075475	C C	CG CG	1	a0001c0001t0003g0008 a0001c0001t0003g0008	1	NA19004.hp1 NA19004.hp1	intron_variant	MODIFIER	c.-18+664dupC c.-18+664dupC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075475
chrX:104075477	G G	GC GC	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+662dupG c.-18+662dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075477
chrX:104075511	T T	TC TC	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+628dupG c.-18+628dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075511
chrX:104075531	G G	GGC GGC	1	a0001c0001t0003g0008 a0001c0001t0003g0008	1	NA19004.hp1 NA19004.hp1	intron_variant	MODIFIER	c.-18+607_-18+608dup others(2): Show c.-18+607_-18+608dupGC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075531
chrX:104075565	C C	G G	3	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0019 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0019	11	HG00423.hp2 HG00621.hp1 HG01123.hp1 others(8): Show HG00423.hp2 HG00621.hp1 HG01123.hp1 HG01192.hp1 HG02083.hp1 HG02132.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA19064.hp2 NA19089.hp1	intron_variant	MODIFIER	c.-18+575G>C c.-18+575G>C	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075565
chrX:104075665	C C	CG CG	1	a0001c0001t0003g0008 a0001c0001t0003g0008	1	NA19004.hp1 NA19004.hp1	intron_variant	MODIFIER	c.-18+474dupC c.-18+474dupC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075665
chrX:104075734	GC GC	G G	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+405delG c.-18+405delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075734
chrX:104075755	AG AG	A A	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.-18+384delC c.-18+384delC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075755
chrX:104075761	A A	AG AG	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+378dupC c.-18+378dupC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075761
chrX:104075786	G G	GC GC	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+353dupG c.-18+353dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075786
chrX:104075800	GC GC	G G	1	a0001c0001t0002g0007 a0001c0001t0002g0007	1	HG01515.hp1 HG01515.hp1	intron_variant	MODIFIER	c.-18+339delG c.-18+339delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075800
chrX:104075819	T T	C C	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	NA19043.hp2 NA19043.hp2	intron_variant	MODIFIER	c.-18+321A>G c.-18+321A>G	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075819
chrX:104075880	AC AC	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+259delG c.-18+259delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075880
chrX:104075883	A A	AC AC	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+256dupG c.-18+256dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075883
chrX:104075889	T T	C C	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	HG00423.hp2 HG00423.hp2	intron_variant	MODIFIER	c.-18+251A>G c.-18+251A>G	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075889
chrX:104075901	T T	TC TC	2	a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0009 a0001c0001t0001g0017	2	HG01175.hp2 NA19074.hp1 HG01175.hp2 NA19074.hp1	intron_variant	MODIFIER	c.-18+238dupG c.-18+238dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075901
chrX:104075928	G G	GC GC	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+211dupG c.-18+211dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075928
chrX:104075933	CG CG	C C	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+206delC c.-18+206delC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075933
chrX:104075937	AG AG	A A	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.-18+202delC c.-18+202delC	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075937
chrX:104075972	GA GA	G G	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+167delT c.-18+167delT	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075972
chrX:104075979	A A	C C	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+161T>G c.-18+161T>G	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075979
chrX:104075980	A A	AT AT	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.-18+159_-18+160ins others(1): Show c.-18+159_-18+160insA	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075980
chrX:104075993	G G	GC GC	1	a0001c0001t0006g0021 a0001c0001t0006g0021	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+146dupG c.-18+146dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104075993
chrX:104076017	AC AC	A A	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+122delG c.-18+122delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076017
chrX:104076028	G G	GC GC	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.-18+111dupG c.-18+111dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076028
chrX:104076028	GC GC	G G	1	a0001c0001t0002g0007 a0001c0001t0002g0007	1	HG01515.hp1 HG01515.hp1	intron_variant	MODIFIER	c.-18+111delG c.-18+111delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076028
chrX:104076051	TC TC	T T	1	a0001c0001t0002g0007 a0001c0001t0002g0007	1	HG01515.hp1 HG01515.hp1	intron_variant	MODIFIER	c.-18+88delG c.-18+88delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076051
chrX:104076081	A A	AC AC	2	a0001c0001t0001g0010 a0001c0001t0006g0021 a0001c0001t0001g0010 a0001c0001t0006g0021	2	HG01175.hp1 NA18953.hp1 HG01175.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-18+58dupG c.-18+58dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076081
chrX:104076081	AC AC	A A	1	a0001c0001t0002g0007 a0001c0001t0002g0007	1	HG01515.hp1 HG01515.hp1	intron_variant	MODIFIER	c.-18+58delG c.-18+58delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076081
chrX:104076096	C C	A A	2	a0001c0001t0001g0004 a0001c0001t0001g0019 a0001c0001t0001g0004 a0001c0001t0001g0019	6	HG00423.hp2 HG01123.hp1 HG02083.hp1 others(3): Show HG00423.hp2 HG01123.hp1 HG02083.hp1 NA18969.hp2 NA19064.hp2 NA19089.hp1	intron_variant	MODIFIER	c.-18+44G>T c.-18+44G>T	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076096
chrX:104076098	TC TC	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.-18+41delG c.-18+41delG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076098
chrX:104076110	T T	TC TC	1	a0001c0001t0005g0020 a0001c0001t0005g0020	1	NA18940.hp1 NA18940.hp1	intron_variant	MODIFIER	c.-18+29dupG c.-18+29dupG	TMSB15C	ENSG00000269226.8	transcript	ENST00000598087.4	protein_coding	1/2	chrX	104076110

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JoGo Online Haplotype Explorer TMSB15C_chrX_104067887_104081236

JoGo Local Haplotype Explorer (on iGV) TMSB15C_chrX_104067887_104081236

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 1)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 21)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 1)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 6)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 21)

Haplotype Details by Sample (Haploid Level) (Total: 94)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 0)

TTranscript Level Haplotype Variants (Exon) (Total: 7)

GGenebody Level Haplotype Variants (Intron) (Total: 63)

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Annotation (Repeats)

Annotation (SNP Array)